Rh1DG015900

Belongs to the chalcone stilbene synthases family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000409
Physical Location & Seq
Reverse (-)
2694925 .. 2696769
1845 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG015900.1

Sequence Viewer

Length: 1170 bp
ATGGTTACCGTCGAGGAAGTCCGCAAGGCCCAACGCGCTGAGGGTCCGGCTACCGTCTTGGCCATCGGAACAGCAACTCCTCCCAATTGTATTGACCAGAGCACATACCCCGACTACTACTTCCGTATCACTAAGAGCGAGCACAAGGCTGAGCTCAAGGAGAAATTCCAGCGCATGTGTGACAAATCTATGATCAAGAAGCGCTACATGTACTTGACCGAAGAAATTCTCAAGGAGAATCCTAGTATGTGTGAGTACATGGCCCCTTCACTTGACGCAAGACAAGATATGGTGGTTGTTGAAATTCCAAAGCTTGGAAAAGAGGCTGCCACTAAGGCTATTAAGGAATGGGGTCAGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGTACCACTAGTGGCGTCGACATGCCCGGGGCCGATTACCAGCTCACTAAGCTCTTAGGCCTCCGCCCGTCCGTGAAGCGTCTCATGATGTACCAACAAGGGTGTTTCGCCGGAGGCACGGTGCTTCGGTTGGCTAAGGACTTGGCCGAGAACAACAAGGGTGCACGTGTTCTTGTTGTTTGCTCAGAGATCACTGCCGTGACTTTCCGTGGGCCTAGCGACACCCATCTCGATAGTCTTGTGGGCCAAGCCTTGTTCGGTGATGGTGCTGCAGCCATTATTGTTGGGGCCGACCCATTGCCCGAGGTTGAGAAGCCTTTGTTCGAGTTGGTCTCGGCAGCCCAAACTATCCTTCCTGACAGTGACGGAGCCATCGACGGGCATCTTCGGGAAGTTGGGCTCACATTTCACCTCCTCAAAGATGTTCCCGGACTGATTTCAAAGAACATCGAGAAGAGCCTCAACGAGGCCTTCAAACCTTTGAACATCACAGACTGGAACTCACTTTTCTGGATTGCACACCCGGGTGGCCCTGCAATTTTAGACCAAGTAGAGGCTAAATTGGGCCTGAAGCCCGACAAGTTAGAAGCCACAAGGCATATATTATCCGAGTACGGCAATATGTCTAGTGCTTGTGTGTTGTTTATTTTGGACGAGGTGAGGAGAAAGTCTGCAGCTAATGGGCACAAGACCACTGGAGAAGGCCTGGAGTGGGGTGTCCTATTTGGTTTTGGGCCAGGGCTCACCGTCGAGACCGTCGTGCTTCACAGTGTGGCTGCTTAA

Protein Analysis

389

Amino Acids

42.51

Weight (kDa)

6.18

Isoelectric Point (pI)

37.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chal_sti_synt_N PF00195 5 - 228 3.9e-125 Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C PF02797 238 - 387 1e-70 Chalcone and stilbene synthases, C-terminal domain
ACP_syn_III_C PF08541 301 - 384 6e-06 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13930
fragaria_vesca FvH4_2g28040 FvH4_2g28050 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160
malus_domestica MD04G1003000.v1.1 MD04G1003300.v1.1 MD04G1003400.v1.1 MD04G1111500.v1.1 MD08G1116200.v1.1 MD13G1285100.v1.1 MD14G1160800.v1.1 MD14G1160900.v1.1 MD15G1131700.v1.1 MD15G1132000.v1.1 MD15G1132100.v1.1 MD15G1132200.v1.1 MD15G1132300.v1.1
prunus_persica Prupe.1G002900_v2.0.a1 Prupe.1G002900_v2.0.a1 Prupe.1G003000_v2.0.a1 Prupe.4G252100_v2.0.a1 Prupe.4G252800_v2.0.a1 Prupe.4G253000_v2.0.a1 Prupe.4G253100_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005800_v2.0.a1
pyrus_communis pycom04g00310 pycom04g00320 pycom04g00350 pycom13g10200 pycom15g11900 pycom15g11910 pycom15g11920 pycom15g11930 pycom15g11940 pycom420g00730
rosa_chinensis RchiOBHm_Chr1g0316441 RchiOBHm_Chr1g0316451 RchiOBHm_Chr1g0316461 RchiOBHm_Chr4g0399981 RchiOBHm_Chr6g0296951 RchiOBHm_Chr6g0297001 RchiOBHm_Chr6g0297011
rosa_laevigata RLG00000009221 RLG00000011646 RLG00000030671 RLG00000030673
rosa_multiflora Rmu_co8031452.1_g000001 Rmu_co8152518.1_g000001 Rmu_sc0000081.1_g000010 Rmu_sc0004672.1_g000001 Rmu_sc0006453.1_g000028 Rmu_sc0006790.1_g000004 Rmu_sc0007272.1_g000004 Rmu_sc0023107.1_g000002 Rmu_sc0023714.1_g000001
rosa_roxburghii Rroxscaffold_4G00330980 Rroxscaffold_4G00330990 Rroxscaffold_4G00331000 Rroxscaffold_7G00171030
rosa_rugosa Rorug01G0010500 Rorug01G0010600 Rorug01G0011000 Rorug03G0299400 Rorug03G0299500 Rorug04G0022100 Rorug05G0381700 Rorug06G0267700
rosa_samantha Rh1AG020500 Rh1BG015600 Rh1BG015800 Rh1CG018400 Rh1CG018600 Rh1CG018800 Rh1DG015500 Rh1DG015700 Rh1DG015900 Rh4AG097700 Rh4BG095700 Rh4CG106900 Rh4DG092500 Rh6AG378300 Rh6BG386300 Rh6CG392100 Rh6CG392300 Rh6DG379000
rosa_wichuraiana Rw0G010230 Rw1G001330 Rw1G001340 Rw4G008110 Rw4G013630 Rw6G033070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 314
AccI GTMKAC 1 cut(s) 405
AccII CGCG 1 cut(s) 36
AciI CCGC 2 cut(s) 22, 451
AcoI YGGCCR 2 cut(s) 60, 531
AcsI RAATTY 3 cut(s) 164, 225, 303
AcuI CTGAAG 1 cut(s) 977
AcvI CACGTG 1 cut(s) 554
AcyI GRCGYC 1 cut(s) 402
AdeI CACNNNGTG 1 cut(s) 1159
AfaI GTAC 5 cut(s) 212, 257, 391, 479, 1001
AfeI AGCGCT 1 cut(s) 203
AfiI CCNNNNNNNGG 5 cut(s) 314, 765, 853, 940, 1099
AflIII ACRYGT 2 cut(s) 207, 553
AgsI TTSAA 4 cut(s) 302, 828, 862, 871
AhlI ACTAGT 1 cut(s) 395
AjnI CCWGG 2 cut(s) 1092, 1123
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
AleI CACNNNNGTG 2 cut(s) 584, 912
AloI GAACNNNNNNTCC 2 cut(s) 61, 93
AluBI AGCT 5 cut(s) 154, 313, 430, 439, 1064
AluI AGCT 5 cut(s) 154, 313, 430, 439, 1064
Alw21I GWGCWC 4 cut(s) 104, 144, 156, 553
Alw26I GTCTC 3 cut(s) 473, 724, 1133
Alw44I GTGCAC 1 cut(s) 549
Ama87I CYCGRG 3 cut(s) 413, 689, 910
Aor51HI AGCGCT 1 cut(s) 203
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 6 cut(s) 326, 656, 659, 725, 1061, 1163
ApoI RAATTY 3 cut(s) 164, 225, 303
Asp700I GAANNNNTTC 1 cut(s) 225
AspLEI GCGC 3 cut(s) 38, 174, 204
AsuC2I CCSGG 5 cut(s) 414, 415, 816, 911, 912
AsuHPI GGTGA 5 cut(s) 364, 659, 788, 1057, 1123
AvaI CYCGRG 3 cut(s) 413, 689, 910
AvaII GGWCC 1 cut(s) 44
BaeGI GKGCMC 2 cut(s) 553, 1074
BaeI ACNNNNGTAYC 2 cut(s) 109, 142
BalI TGGCCA 1 cut(s) 62
BanII GRGCYC 3 cut(s) 156, 789, 1131
BbrPI CACGTG 1 cut(s) 554
Bbv12I GWGCWC 4 cut(s) 104, 144, 156, 553
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 6 cut(s) 313, 643, 671, 737, 1073, 1150
BccI CCATC 4 cut(s) 71, 621, 644, 767
BceAI ACGGC 2 cut(s) 569, 1018
BciT130I CCWGG 2 cut(s) 1094, 1125
BclI TGATCA 1 cut(s) 192
BcnI CCSGG 5 cut(s) 414, 415, 816, 911, 912
BcoDI GTCTC 3 cut(s) 473, 724, 1133
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 4 cut(s) 243, 396, 603, 1014
BfmI CTRYAG 2 cut(s) 657, 1059
BfoI RGCGCY 1 cut(s) 205
BglI GCCNNNNNGGC 1 cut(s) 335
BisI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 6 cut(s) 328, 658, 661, 727, 1063, 1165
Bme1390I CCNGG 7 cut(s) 414, 415, 816, 911, 912, 1094, 1125
Bme18I GGWCC 1 cut(s) 44
BmeT110I CYCGRG 3 cut(s) 413, 689, 910
BmiI GGNNCC 5 cut(s) 45, 264, 418, 676, 757
BmrFI CCNGG 7 cut(s) 414, 415, 816, 911, 912, 1094, 1125
BmsI GCATC 1 cut(s) 778
BplI GAGNNNNNCTC 2 cut(s) 704, 736
BpmI CTGGAG 2 cut(s) 1104, 1115
Bpu10I CCTNAGC 2 cut(s) 39, 522
Bpu1102I GCTNAGC 1 cut(s) 150
BpuEI CTTGAG 2 cut(s) 140, 215
BpuMI CCSGG 5 cut(s) 414, 415, 816, 911, 912
BsaAI YACGTR 1 cut(s) 554
BsaHI GRCGYC 1 cut(s) 402
BsaI GGTCTC 2 cut(s) 724, 1133
BsaJI CCNNGG 6 cut(s) 413, 414, 595, 690, 910, 1124
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 492, 522
Bsc4I CCNNNNNNNGG 5 cut(s) 314, 765, 853, 940, 1099
Bse1I ACTGG 2 cut(s) 887, 1087
Bse3DI GCAATG 1 cut(s) 683
BseBI CCWGG 2 cut(s) 1094, 1125
BseDI CCNNGG 6 cut(s) 413, 414, 595, 690, 910, 1124
BseLI CCNNNNNNNGG 5 cut(s) 314, 765, 853, 940, 1099
BseMI GCAATG 1 cut(s) 683
BseMII CTCAG 3 cut(s) 30, 141, 585
BseNI ACTGG 2 cut(s) 887, 1087
BseRI GAGGAG 3 cut(s) 69, 791, 1063
BseSI GKGCMC 2 cut(s) 553, 1074
BseXI GCAGC 6 cut(s) 313, 643, 671, 737, 1073, 1150
Bsh1236I CGCG 1 cut(s) 36
BsiHKAI GWGCWC 4 cut(s) 104, 144, 156, 553
BsiHKCI CYCGRG 3 cut(s) 413, 689, 910
BsiSI CCGG 5 cut(s) 47, 414, 498, 816, 911
BslI CCNNNNNNNGG 5 cut(s) 314, 765, 853, 940, 1099
BsmAI GTCTC 3 cut(s) 473, 724, 1133
BsmBI CGTCTC 1 cut(s) 473
Bso31I GGTCTC 2 cut(s) 724, 1133
BsoBI CYCGRG 3 cut(s) 413, 689, 910
Bsp1286I GDGCHC 7 cut(s) 104, 144, 156, 553, 789, 1074, 1131
Bsp143I GATC 2 cut(s) 192, 576
Bsp1720I GCTNAGC 1 cut(s) 150
BspACI CCGC 2 cut(s) 22, 451
BspCNI CTCAG 3 cut(s) 31, 142, 584
BspFNI CGCG 1 cut(s) 36
BspHI TCATGA 1 cut(s) 471
BspLI GGNNCC 5 cut(s) 45, 264, 418, 676, 757
BspMAI CTGCAG 2 cut(s) 661, 1063
BspQI GCTCTTC 1 cut(s) 836
BspTNI GGTCTC 2 cut(s) 724, 1133
BsrDI GCAATG 1 cut(s) 683
BsrI ACTGG 2 cut(s) 887, 1087
BssECI CCNNGG 6 cut(s) 413, 414, 595, 690, 910, 1124
BssMI GATC 2 cut(s) 192, 576
BssNI GRCGYC 1 cut(s) 402
Bst2UI CCWGG 2 cut(s) 1094, 1125
Bst4CI ACNGT 7 cut(s) 10, 55, 508, 749, 1135, 1144, 1157
Bst6I CTCTTC 1 cut(s) 836
BstACI GRCGYC 1 cut(s) 402
BstBAI YACGTR 1 cut(s) 554
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 8 cut(s) 39, 132, 150, 333, 435, 442, 522, 571
BstDSI CCRYGG 1 cut(s) 595
BstEII GGTNACC 1 cut(s) 4
BstENI CCTNNNNNAGG 1 cut(s) 851
BstFNI CGCG 1 cut(s) 36
BstH2I RGCGCY 1 cut(s) 205
BstHHI GCGC 3 cut(s) 38, 174, 204
BstKTI GATC 2 cut(s) 195, 579
BstMAI GTCTC 3 cut(s) 473, 724, 1133
BstMBI GATC 2 cut(s) 192, 576
BstMWI GCNNNNNNNGC 3 cut(s) 35, 335, 436
BstNI CCWGG 2 cut(s) 1094, 1125
BstNSI RCATGY 3 cut(s) 178, 211, 412
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 7 cut(s) 412, 413, 814, 909, 910, 1092, 1123
BstSFI CTRYAG 2 cut(s) 657, 1059
BstSLI GKGCMC 2 cut(s) 553, 1074
BstUI CGCG 1 cut(s) 36
BstV1I GCAGC 6 cut(s) 313, 643, 671, 737, 1073, 1150
BtgI CCRYGG 1 cut(s) 595
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 4 cut(s) 579, 754, 1080, 1162
Cac8I GCNNGC 1 cut(s) 140
CciI TCATGA 1 cut(s) 471
CfoI GCGC 3 cut(s) 38, 174, 204
Cfr9I CCCGGG 2 cut(s) 413, 910
CseI GACGC 3 cut(s) 284, 391, 455
Csp6I GTAC 5 cut(s) 211, 256, 390, 478, 1000
CviAII CATG 5 cut(s) 175, 208, 259, 409, 472
CviQI GTAC 5 cut(s) 211, 256, 390, 478, 1000
DdeI CTNAG 8 cut(s) 39, 132, 150, 333, 435, 442, 522, 571
DpnI GATC 2 cut(s) 194, 578
DpnII GATC 2 cut(s) 192, 576
DraIII CACNNNGTG 1 cut(s) 1159
EaeI YGGCCR 2 cut(s) 60, 531
Eam1104I CTCTTC 1 cut(s) 836
EarI CTCTTC 1 cut(s) 836
EciI GGCGGA 1 cut(s) 440
Ecl136II GAGCTC 1 cut(s) 154
Eco147I AGGCCT 3 cut(s) 447, 857, 1092
Eco24I GRGCYC 3 cut(s) 156, 789, 1131
Eco31I GGTCTC 2 cut(s) 724, 1133
Eco47I GGWCC 1 cut(s) 44
Eco47III AGCGCT 1 cut(s) 203
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 977
Eco72I CACGTG 1 cut(s) 554
Eco88I CYCGRG 3 cut(s) 413, 689, 910
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 154
EcoNI CCTNNNNNAGG 1 cut(s) 851
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 2 cut(s) 1092, 1123
EcoT38I GRGCYC 3 cut(s) 156, 789, 1131
Esp3I CGTCTC 1 cut(s) 473
FaeI CATG 5 cut(s) 178, 211, 262, 412, 475
FatI CATG 5 cut(s) 174, 207, 258, 408, 471
FbaI TGATCA 1 cut(s) 192
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
FriOI GRGCYC 3 cut(s) 156, 789, 1131
Fsp4HI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
FspBI CTAG 4 cut(s) 243, 396, 603, 1014
GlaI GCGC 3 cut(s) 37, 173, 203
GluI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
GsuI CTGGAG 2 cut(s) 1104, 1115
HaeII RGCGCY 1 cut(s) 205
HapII CCGG 5 cut(s) 47, 414, 498, 816, 911
HgaI GACGC 3 cut(s) 284, 391, 455
HhaI GCGC 3 cut(s) 38, 174, 204
Hin1I GRCGYC 1 cut(s) 402
Hin1II CATG 5 cut(s) 178, 211, 262, 412, 475
Hin6I GCGC 3 cut(s) 36, 172, 202
HinP1I GCGC 3 cut(s) 36, 172, 202
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 1 cut(s) 238
HpaII CCGG 5 cut(s) 47, 414, 498, 816, 911
HphI GGTGA 5 cut(s) 364, 659, 788, 1057, 1123
Hpy166II GTNNAC 2 cut(s) 406, 551
Hpy188I TCNGA 3 cut(s) 68, 574, 997
Hpy188III TCNNGA 8 cut(s) 196, 472, 617, 743, 776, 838, 898, 1138
Hpy8I GTNNAC 2 cut(s) 406, 551
Hpy99I CGWCG 5 cut(s) 14, 407, 767, 1139, 1148
HpyAV CCTTC 4 cut(s) 276, 749, 868, 1082
HpyCH4III ACNGT 7 cut(s) 10, 55, 508, 749, 1135, 1144, 1157
HpyCH4IV ACGT 1 cut(s) 553
HpyCH4V TGCA 5 cut(s) 551, 659, 905, 923, 1061
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 335, 436
HpyF3I CTNAG 8 cut(s) 39, 132, 150, 333, 435, 442, 522, 571
HpySE526I ACGT 1 cut(s) 553
Hsp92I GRCGYC 1 cut(s) 402
Hsp92II CATG 5 cut(s) 178, 211, 262, 412, 475
HspAI GCGC 3 cut(s) 36, 172, 202
Ksp22I TGATCA 1 cut(s) 192
Kzo9I GATC 2 cut(s) 192, 576
LguI GCTCTTC 1 cut(s) 836
LmnI GCTCC 1 cut(s) 755
Lsp1109I GCAGC 6 cut(s) 313, 643, 671, 737, 1073, 1150
LweI GCATC 1 cut(s) 778
MaeI CTAG 4 cut(s) 243, 396, 603, 1014
MaeII ACGT 1 cut(s) 553
MaeIII GTNAC 4 cut(s) 4, 179, 586, 749
MalI GATC 2 cut(s) 194, 578
MboI GATC 2 cut(s) 192, 576
MboII GAAGA 3 cut(s) 233, 764, 853
MfeI CAATTG 1 cut(s) 85
MhlI GDGCHC 7 cut(s) 104, 144, 156, 553, 789, 1074, 1131
MlsI TGGCCA 1 cut(s) 62
MluCI AATT 6 cut(s) 85, 164, 225, 303, 924, 947
MluNI TGGCCA 1 cut(s) 62
Mox20I TGGCCA 1 cut(s) 62
MroXI GAANNNNTTC 1 cut(s) 225
MscI TGGCCA 1 cut(s) 62
MseI TTAA 2 cut(s) 342, 1168
MslI CAYNNNNRTG 2 cut(s) 584, 912
Msp20I TGGCCA 1 cut(s) 62
MspI CCGG 5 cut(s) 47, 414, 498, 816, 911
MspR9I CCNGG 7 cut(s) 414, 415, 816, 911, 912, 1094, 1125
MunI CAATTG 1 cut(s) 85
MvaI CCWGG 2 cut(s) 1094, 1125
MvnI CGCG 1 cut(s) 36
MwoI GCNNNNNNNGC 3 cut(s) 35, 335, 436
NciI CCSGG 5 cut(s) 414, 415, 816, 911, 912
NdeII GATC 2 cut(s) 192, 576
NlaIII CATG 5 cut(s) 178, 211, 262, 412, 475
NlaIV GGNNCC 5 cut(s) 45, 264, 418, 676, 757
NmeAIII GCCGAG 2 cut(s) 559, 701
NmuCI GTSAC 3 cut(s) 179, 586, 749
NspI RCATGY 3 cut(s) 178, 211, 412
OliI CACNNNNGTG 2 cut(s) 584, 912
PagI TCATGA 1 cut(s) 471
PceI AGGCCT 3 cut(s) 447, 857, 1092
PciI ACATGT 1 cut(s) 207
PciSI GCTCTTC 1 cut(s) 836
PcsI WCGNNNNNNNCGW 2 cut(s) 759, 1143
PdmI GAANNNNTTC 1 cut(s) 225
PfeI GAWTC 1 cut(s) 238
PflMI CCANNNNNTGG 1 cut(s) 314
PfoI TCCNGGA 1 cut(s) 814
PkrI GCNGC 6 cut(s) 328, 658, 661, 727, 1063, 1165
PmaCI CACGTG 1 cut(s) 554
PmlI CACGTG 1 cut(s) 554
Ppu21I YACGTR 1 cut(s) 554
PscI ACATGT 1 cut(s) 207
Psp124BI GAGCTC 1 cut(s) 156
Psp6I CCWGG 2 cut(s) 1092, 1123
PspCI CACGTG 1 cut(s) 554
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 1092, 1123
PspN4I GGNNCC 5 cut(s) 45, 264, 418, 676, 757
PstI CTGCAG 2 cut(s) 661, 1063
RsaI GTAC 5 cut(s) 212, 257, 391, 479, 1001
RsaNI GTAC 5 cut(s) 211, 256, 390, 478, 1000
RseI CAYNNNNRTG 2 cut(s) 584, 912
SacI GAGCTC 1 cut(s) 156
SalI GTCGAC 1 cut(s) 404
SapI GCTCTTC 1 cut(s) 836
SaqAI TTAA 2 cut(s) 342, 1168
SatI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
Sau3AI GATC 2 cut(s) 192, 576
ScrFI CCNGG 7 cut(s) 414, 415, 816, 911, 912, 1094, 1125
SduI GDGCHC 7 cut(s) 104, 144, 156, 553, 789, 1074, 1131
SfaNI GCATC 1 cut(s) 778
SfcI CTRYAG 2 cut(s) 657, 1059
SinI GGWCC 1 cut(s) 44
SmaI CCCGGG 2 cut(s) 415, 912
SmiMI CAYNNNNRTG 2 cut(s) 584, 912
SmlI CTYRAG 2 cut(s) 155, 230
SmoI CTYRAG 2 cut(s) 155, 230
SpeI ACTAGT 1 cut(s) 395
Sse9I AATT 6 cut(s) 85, 164, 225, 303, 924, 947
SseBI AGGCCT 3 cut(s) 447, 857, 1092
SsiI CCGC 2 cut(s) 22, 451
SspMI CTAG 4 cut(s) 243, 396, 603, 1014
SstI GAGCTC 1 cut(s) 156
StuI AGGCCT 3 cut(s) 447, 857, 1092
StyD4I CCNGG 7 cut(s) 412, 413, 814, 909, 910, 1092, 1123
TaaI ACNGT 7 cut(s) 10, 55, 508, 749, 1135, 1144, 1157
TaiI ACGT 1 cut(s) 556
TaqI TCGA 7 cut(s) 12, 405, 618, 711, 762, 837, 1137
TaqII GACCGA 1 cut(s) 233
TasI AATT 6 cut(s) 85, 164, 225, 303, 924, 947
TatI WGTACW 2 cut(s) 210, 255
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 2 cut(s) 342, 1168
Tru9I TTAA 2 cut(s) 342, 1168
TscAI CASTG 4 cut(s) 586, 754, 1087, 1162
TseFI GTSAC 3 cut(s) 179, 586, 749
TseI GCWGC 6 cut(s) 326, 656, 659, 725, 1061, 1163
Tsp45I GTSAC 3 cut(s) 179, 586, 749
TspGWI ACGGA 4 cut(s) 113, 448, 584, 768
TspMI CCCGGG 2 cut(s) 413, 910
TspRI CASTG 4 cut(s) 586, 754, 1087, 1162
Van91I CCANNNNNTGG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 1 cut(s) 44
XagI CCTNNNNNAGG 1 cut(s) 851
XapI RAATTY 3 cut(s) 164, 225, 303
XceI RCATGY 3 cut(s) 178, 211, 412
XmaI CCCGGG 2 cut(s) 413, 910
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 4 cut(s) 243, 396, 603, 1014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.