Rorug03G0299500

Belongs to the chalcone stilbene synthases family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
31271762 .. 31277442
5681 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0299500.1

Sequence Viewer

Length: 1956 bp
ATGATGAATAAGAAGATATTGACAACACTGTCAATAATTACGATCAGCCAGATATGGTGGTGGGCTTGTGTGAGTGCAGACCCGCAGATCAATCTTCTGAACGAGGGTTGCAGCCAGTACAACGCAACCAGCCTGTCCAACTTCTATACCAATCTCAACGCCACTTTCTTGGACCTCAAAGCGCAACTACTCAACGGCAGCAAACACTTTGCAACGGCCCAACAGGCCAAGGGCTCCGACCCCGTCTACGCCATGACGCAGTGTAGGAACTACCTTTCCTCCGCCGACTGTCTATCTTGCTTTGCCGCCGCCGTCTCCCAAATCCGCAACTGCTCTGCCTCCAATGGCGCACGCGTCGTCTACGACGGCTGCTTCCTCCGGTATGAGAGCAGTGGTTTTTTTGACCAGACTGTAGCTACCCTTCCTGGTAATGTAGGACTCTGTGGGAATCAAACTGGATCGCCTGCTACAACCTTTACTGCAGCTGCTGAAGAACTTCTAATGGATCTTCAAGTTGCTACGCCCAAGATTAATGGCTTCTTCGCAGCATCTAAGGAGGTAGTTAGCAGTAGTGGAAACACAACAGTCTATGGTGTGGCACAATGTGCCGAGACAACTACCGTAACTGGTTGCCAAGATTGTTTGAAGGTGGCATACACCAATGTACAGAGTTGCCTTCCCGATACAGACGGTAGAGCAGTTGATGCCGGTTGTTTCTTGAGGTACTCTGCTACTTCTTTCTTCCCAGATAACCAGACTACTAATATCACACCTTTCTTAGAGAAAGGAGGTAATTCAAGAAAGAAGGCCATCATCATTGGAGTAGTGGTTGGAGGTGTAGGTCTTATTTTACTCATTGTTGGAGTTTTGATCTATTTCAAACTTTCAAGGAAGCCCAAGACGGTTCGTAGAGGAGACATATTGGGAGCAACCGAGTTGCAAGGTCCAGTGAATTATAAGTATAAAGATCTGAAGTCGGCAACAGCAAATTTTAGTGATGCAAATAAGCTAGGAGAAGGAGGATTCGGGGACGTCTACAAGGCAACTCTAAACAATGGGAAAACAGTTGCAGTAAAGAAACTAGCTATAGTCCAATCAGACAGGGCAATGACAAGTTTCGAAAATGAAGTCAAGCTTATAAGTAATGTACATCACCGGAATCTAATTCGCCTTCTTGGATGCTGTAGCAAAGGACCAGAATTACTTCTGATATATGAATACATGGCAAACAACAGTCTGGACAAATTCTTATTTGGTGAGAAAAGAGGCTTTCTAAACTGGAAGCAAAGGAATGATATAATCGTCGGTACAGCTAGGGGTCTAGCCTATCTACATGAGGAATTCCATGTATGTATCATACATAGAGATATAAAAACCAGCAACATTCTCTTGGATGATGGTTTTCAGCCAAGAATTGCAGATTTTGGGTTGGCAAGGCTTTTACCCGAGGATCAAACTCATCTTAGTACCCGATTTGCAGGAACATTAGGATACACAGCACCTGAATATGCAATCCATGGTCAATTGTCAGAAAAGGTGGATACCTATAGCTATGGAGTAGTAGTCCTTGAAATTGTAAGCGGCCAAAAGAGCAGTGAAATCAAATCTGATACTATGGGTGAATTTCTCCTCGAAAAGGCCTGGAAACTCTATGAGAACGGCCAGCACTTGAAGTTGGTCGATGAAACATTGGATTCCAACGATTATGAAGCAGAAGATGTGAAAAAGATAGTTGAGATTGCTCTAATGTGCACTCAATCATCACCTGCTCTAAGGCCAACAATGTCTGAAATTGTTGTTTTACTCAAAAGCACAGGCTCTTGGGTAAATAGGCCGCTTACTAGGCCTGTGTTTGTTGATTCTGACCATAAAAGAGTACGGGTGGACACGTCAACTTCTACTGGTTCCTCATCATCCAATGCTACCGCATCCATCTCTCAACTTTCAGGTCGCTAA

Protein Analysis

651

Amino Acids

71.02

Weight (kDa)

7.78

Isoelectric Point (pI)

28.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 37 - 130 3.4e-17 Salt stress response/antifungal
Stress-antifung PF01657 148 - 244 8.6e-13 Salt stress response/antifungal
Pkinase PF00069 332 - 599 1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 335 - 600 4.2e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13930
fragaria_vesca FvH4_2g28040 FvH4_2g28050 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160
malus_domestica MD04G1003000.v1.1 MD04G1003300.v1.1 MD04G1003400.v1.1 MD04G1111500.v1.1 MD08G1116200.v1.1 MD13G1285100.v1.1 MD14G1160800.v1.1 MD14G1160900.v1.1 MD15G1131700.v1.1 MD15G1132000.v1.1 MD15G1132100.v1.1 MD15G1132200.v1.1 MD15G1132300.v1.1
prunus_persica Prupe.1G002900_v2.0.a1 Prupe.1G002900_v2.0.a1 Prupe.1G003000_v2.0.a1 Prupe.4G252100_v2.0.a1 Prupe.4G252800_v2.0.a1 Prupe.4G253000_v2.0.a1 Prupe.4G253100_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005800_v2.0.a1
pyrus_communis pycom04g00310 pycom04g00320 pycom04g00350 pycom13g10200 pycom15g11900 pycom15g11910 pycom15g11920 pycom15g11930 pycom15g11940 pycom420g00730
rosa_chinensis RchiOBHm_Chr1g0316441 RchiOBHm_Chr1g0316451 RchiOBHm_Chr1g0316461 RchiOBHm_Chr4g0399981 RchiOBHm_Chr6g0296951 RchiOBHm_Chr6g0297001 RchiOBHm_Chr6g0297011
rosa_laevigata RLG00000009221 RLG00000011646 RLG00000030671 RLG00000030673
rosa_multiflora Rmu_co8031452.1_g000001 Rmu_co8152518.1_g000001 Rmu_sc0000081.1_g000010 Rmu_sc0004672.1_g000001 Rmu_sc0006453.1_g000028 Rmu_sc0006790.1_g000004 Rmu_sc0007272.1_g000004 Rmu_sc0023107.1_g000002 Rmu_sc0023714.1_g000001
rosa_roxburghii Rroxscaffold_4G00330980 Rroxscaffold_4G00330990 Rroxscaffold_4G00331000 Rroxscaffold_7G00171030
rosa_rugosa Rorug01G0010500 Rorug01G0010600 Rorug01G0011000 Rorug03G0299400 Rorug03G0299500 Rorug04G0022100 Rorug05G0381700 Rorug06G0267700
rosa_samantha Rh1AG020500 Rh1BG015600 Rh1BG015800 Rh1CG018400 Rh1CG018600 Rh1CG018800 Rh1DG015500 Rh1DG015700 Rh1DG015900 Rh4AG097700 Rh4BG095700 Rh4CG106900 Rh4DG092500 Rh6AG378300 Rh6BG386300 Rh6CG392100 Rh6CG392300 Rh6DG379000
rosa_wichuraiana Rw0G010230 Rw1G001330 Rw1G001340 Rw4G008110 Rw4G013630 Rw6G033070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 957, 1139
AarI CACCTGC 1 cut(s) 1774
AasI GACNNNNNNGTC 1 cut(s) 28
AatII GACGTC 1 cut(s) 1035
Acc36I ACCTGC 1 cut(s) 1774
AccI GTMKAC 3 cut(s) 246, 360, 1035
AccII CGCG 1 cut(s) 354
AciI CCGC 8 cut(s) 83, 282, 306, 309, 325, 1581, 1835, 1926
AclWI GGATC 3 cut(s) 466, 513, 1458
AcoI YGGCCR 2 cut(s) 1582, 1660
AcsI RAATTY 4 cut(s) 988, 1244, 1340, 1622
AcuI CTGAAG 2 cut(s) 510, 992
AcyI GRCGYC 1 cut(s) 1032
AdeI CACNNNGTG 1 cut(s) 605
AfaI GTAC 7 cut(s) 119, 666, 725, 1149, 1309, 1468, 1878
AfiI CCNNNNNNNGG 1 cut(s) 1636
AflIII ACRYGT 2 cut(s) 352, 1887
AgsI TTSAA 7 cut(s) 512, 646, 798, 880, 888, 1571, 1672
AjiI CACGTC 1 cut(s) 1890
AjnI CCWGG 2 cut(s) 424, 1640
AloI GAACNNNNNNTCC 2 cut(s) 260, 292
AluBI AGCT 7 cut(s) 416, 485, 1009, 1085, 1135, 1313, 1551
AluI AGCT 7 cut(s) 416, 485, 1009, 1085, 1135, 1313, 1551
Alw21I GWGCWC 1 cut(s) 1754
Alw26I GTCTC 3 cut(s) 319, 605, 909
Alw44I GTGCAC 1 cut(s) 1750
AlwI GGATC 3 cut(s) 466, 513, 1458
AlwNI CAGNNNCTG 2 cut(s) 488, 1502
Ama87I CYCGRG 1 cut(s) 1445
AoxI GGCC 9 cut(s) 216, 225, 807, 1582, 1638, 1660, 1775, 1832, 1844
ApaLI GTGCAC 1 cut(s) 1750
ApeKI GCWGC 6 cut(s) 111, 198, 369, 482, 485, 545
ApoI RAATTY 4 cut(s) 988, 1244, 1340, 1622
ArsI GACNNNNNNTTYG 2 cut(s) 1113, 1145
AseI ATTAAT 1 cut(s) 531
Asp700I GAANNNNTTC 2 cut(s) 495, 1203
AspLEI GCGC 2 cut(s) 184, 350
AspS9I GGNCC 4 cut(s) 172, 217, 944, 1193
AsuHPI GGTGA 4 cut(s) 1145, 1268, 1631, 1755
AsuII TTCGAA 1 cut(s) 1119
AvaI CYCGRG 1 cut(s) 1445
AvaII GGWCC 3 cut(s) 172, 944, 1193
BaeGI GKGCMC 1 cut(s) 1754
BanII GRGCYC 1 cut(s) 236
BarI GAAGNNNNNNTAC 4 cut(s) 405, 437, 638, 670
Bbv12I GWGCWC 1 cut(s) 1754
BbvI GCAGC 6 cut(s) 123, 210, 356, 472, 494, 557
BccI CCATC 3 cut(s) 818, 1391, 1940
BceAI ACGGC 5 cut(s) 211, 231, 296, 382, 1675
BciT130I CCWGG 2 cut(s) 426, 1642
BciVI GTATCC 2 cut(s) 1484, 1534
BcoDI GTCTC 3 cut(s) 319, 605, 909
BfaI CTAG 5 cut(s) 1010, 1082, 1314, 1322, 1842
BfmI CTRYAG 5 cut(s) 411, 480, 1086, 1183, 1546
BfuAI ACCTGC 1 cut(s) 1774
BfuI GTATCC 2 cut(s) 1484, 1534
BglI GCCNNNNNGGC 1 cut(s) 224
BglII AGATCT 1 cut(s) 967
Bme1390I CCNGG 2 cut(s) 426, 1642
Bme18I GGWCC 3 cut(s) 172, 944, 1193
BmeT110I CYCGRG 1 cut(s) 1445
BmgBI CACGTC 1 cut(s) 1890
BmgT120I GGNCC 4 cut(s) 172, 217, 944, 1193
BmiI GGNNCC 2 cut(s) 235, 1906
BmrFI CCNGG 2 cut(s) 426, 1642
BmsI GCATC 5 cut(s) 557, 694, 988, 1169, 1937
Bpu14I TTCGAA 1 cut(s) 1119
BpuEI CTTGAG 1 cut(s) 739
BsaHI GRCGYC 1 cut(s) 1032
BsaJI CCNNGG 3 cut(s) 228, 1446, 1516
BsaWI WCCGGW 2 cut(s) 378, 1155
BsaXI ACNNNNNCTCC 6 cut(s) 263, 293, 813, 843, 1548, 1578
Bsc4I CCNNNNNNNGG 1 cut(s) 1636
Bse118I RCCGGY 1 cut(s) 707
Bse1I ACTGG 6 cut(s) 115, 460, 631, 947, 1283, 1906
Bse3DI GCAATG 1 cut(s) 1113
BseBI CCWGG 2 cut(s) 426, 1642
BseDI CCNNGG 3 cut(s) 228, 1446, 1516
BseGI GGATG 4 cut(s) 1184, 1399, 1913, 1928
BseLI CCNNNNNNNGG 1 cut(s) 1636
BseMI GCAATG 1 cut(s) 1113
BseNI ACTGG 6 cut(s) 115, 460, 631, 947, 1283, 1906
BseRI GAGGAG 2 cut(s) 927, 1619
BseSI GKGCMC 1 cut(s) 1754
BseXI GCAGC 6 cut(s) 123, 210, 356, 472, 494, 557
BsgI GTGCAG 1 cut(s) 96
Bsh1236I CGCG 1 cut(s) 354
BshFI GGCC 9 cut(s) 218, 227, 809, 1584, 1640, 1662, 1777, 1834, 1846
BsiHKAI GWGCWC 1 cut(s) 1754
BsiHKCI CYCGRG 1 cut(s) 1445
BsiSI CCGG 3 cut(s) 379, 708, 1156
BslFI GGGAC 1 cut(s) 1043
BslI CCNNNNNNNGG 1 cut(s) 1636
BsmAI GTCTC 3 cut(s) 319, 605, 909
BsmBI CGTCTC 1 cut(s) 319
BsmFI GGGAC 1 cut(s) 1043
BsnI GGCC 9 cut(s) 218, 227, 809, 1584, 1640, 1662, 1777, 1834, 1846
BsoBI CYCGRG 1 cut(s) 1445
Bsp119I TTCGAA 1 cut(s) 1119
Bsp1286I GDGCHC 2 cut(s) 236, 1754
Bsp1407I TGTACA 2 cut(s) 664, 1147
Bsp143I GATC 7 cut(s) 42, 87, 458, 505, 870, 967, 1450
Bsp19I CCATGG 1 cut(s) 1516
BspACI CCGC 8 cut(s) 83, 282, 306, 309, 325, 1581, 1835, 1926
BspANI GGCC 9 cut(s) 218, 227, 809, 1584, 1640, 1662, 1777, 1834, 1846
BspFNI CGCG 1 cut(s) 354
BspLI GGNNCC 2 cut(s) 235, 1906
BspMAI CTGCAG 1 cut(s) 484
BspMI ACCTGC 1 cut(s) 1774
BspPI GGATC 3 cut(s) 466, 513, 1458
BspT104I TTCGAA 1 cut(s) 1119
BsrDI GCAATG 1 cut(s) 1113
BsrFI RCCGGY 1 cut(s) 707
BsrGI TGTACA 2 cut(s) 664, 1147
BsrI ACTGG 6 cut(s) 115, 460, 631, 947, 1283, 1906
BssAI RCCGGY 1 cut(s) 707
BssECI CCNNGG 3 cut(s) 228, 1446, 1516
BssMI GATC 7 cut(s) 42, 87, 458, 505, 870, 967, 1450
BssNI GRCGYC 1 cut(s) 1032
BssT1I CCWWGG 2 cut(s) 228, 1516
Bst2UI CCWGG 2 cut(s) 426, 1642
Bst4CI ACNGT 9 cut(s) 30, 290, 412, 586, 622, 692, 904, 1066, 1235
BstACI GRCGYC 1 cut(s) 1032
BstAPI GCANNNNNTGC 2 cut(s) 605, 704
BstAUI TGTACA 2 cut(s) 664, 1147
BstBI TTCGAA 1 cut(s) 1119
BstC8I GCNNGC 3 cut(s) 352, 465, 1664
BstDEI CTNAG 4 cut(s) 552, 778, 1463, 1772
BstDSI CCRYGG 1 cut(s) 1516
BstENI CCTNNNNNAGG 1 cut(s) 1634
BstF5I GGATG 4 cut(s) 1184, 1399, 1913, 1928
BstFNI CGCG 1 cut(s) 354
BstHHI GCGC 2 cut(s) 184, 350
BstKTI GATC 7 cut(s) 45, 90, 461, 508, 873, 970, 1453
BstMAI GTCTC 3 cut(s) 319, 605, 909
BstMBI GATC 7 cut(s) 42, 87, 458, 505, 870, 967, 1450
BstMWI GCNNNNNNNGC 5 cut(s) 224, 605, 704, 1590, 1843
BstNI CCWGG 2 cut(s) 426, 1642
BstSCI CCNGG 2 cut(s) 424, 1640
BstSFI CTRYAG 5 cut(s) 411, 480, 1086, 1183, 1546
BstSLI GKGCMC 1 cut(s) 1754
BstUI CGCG 1 cut(s) 354
BstV1I GCAGC 6 cut(s) 123, 210, 356, 472, 494, 557
BstX2I RGATCY 2 cut(s) 505, 967
BstXI CCANNNNNNTGG 1 cut(s) 169
BstYI RGATCY 2 cut(s) 505, 967
BsuI GTATCC 2 cut(s) 1484, 1534
BsuRI GGCC 9 cut(s) 218, 227, 809, 1584, 1640, 1662, 1777, 1834, 1846
BtgI CCRYGG 1 cut(s) 1516
BtrI CACGTC 1 cut(s) 1890
BtsCI GGATG 4 cut(s) 1184, 1399, 1913, 1928
BtsI GCAGTG 3 cut(s) 266, 397, 1600
BtsIMutI CAGTG 5 cut(s) 26, 266, 397, 954, 1600
BveI ACCTGC 1 cut(s) 1774
Cac8I GCNNGC 3 cut(s) 352, 465, 1664
CaiI CAGNNNCTG 2 cut(s) 488, 1502
CfoI GCGC 2 cut(s) 184, 350
Cfr10I RCCGGY 1 cut(s) 707
Cfr13I GGNCC 4 cut(s) 172, 217, 944, 1193
CseI GACGC 2 cut(s) 265, 343
Csp6I GTAC 7 cut(s) 118, 665, 724, 1148, 1308, 1467, 1877
CviAII CATG 5 cut(s) 253, 1222, 1334, 1346, 1517
CviQI GTAC 7 cut(s) 118, 665, 724, 1148, 1308, 1467, 1877
DdeI CTNAG 4 cut(s) 552, 778, 1463, 1772
DpnI GATC 7 cut(s) 44, 89, 460, 507, 872, 969, 1452
DpnII GATC 7 cut(s) 42, 87, 458, 505, 870, 967, 1450
DraIII CACNNNGTG 1 cut(s) 605
DrdI GACNNNNNNGTC 1 cut(s) 28
DseDI GACNNNNNNGTC 1 cut(s) 28
EaeI YGGCCR 2 cut(s) 1582, 1660
EciI GGCGGA 1 cut(s) 271
Eco130I CCWWGG 2 cut(s) 228, 1516
Eco147I AGGCCT 2 cut(s) 1640, 1846
Eco24I GRGCYC 1 cut(s) 236
Eco47I GGWCC 3 cut(s) 172, 944, 1193
Eco57I CTGAAG 2 cut(s) 510, 992
Eco88I CYCGRG 1 cut(s) 1445
EcoNI CCTNNNNNAGG 1 cut(s) 1634
EcoRI GAATTC 1 cut(s) 1340
EcoRII CCWGG 2 cut(s) 424, 1640
EcoT14I CCWWGG 2 cut(s) 228, 1516
EcoT38I GRGCYC 1 cut(s) 236
ErhI CCWWGG 2 cut(s) 228, 1516
Esp3I CGTCTC 1 cut(s) 319
FaeI CATG 5 cut(s) 256, 1225, 1337, 1349, 1520
FalI AAGNNNNNCTT 2 cut(s) 1119, 1151
FaqI GGGAC 1 cut(s) 1043
FatI CATG 5 cut(s) 252, 1221, 1333, 1345, 1516
FauI CCCGC 1 cut(s) 90
FblI GTMKAC 3 cut(s) 246, 360, 1035
FokI GGATG 4 cut(s) 1191, 1406, 1900, 1915
FriOI GRGCYC 1 cut(s) 236
FspBI CTAG 5 cut(s) 1010, 1082, 1314, 1322, 1842
GlaI GCGC 2 cut(s) 183, 349
HaeIII GGCC 9 cut(s) 218, 227, 809, 1584, 1640, 1662, 1777, 1834, 1846
HapII CCGG 3 cut(s) 379, 708, 1156
HgaI GACGC 2 cut(s) 265, 343
HhaI GCGC 2 cut(s) 184, 350
Hin1I GRCGYC 1 cut(s) 1032
Hin1II CATG 5 cut(s) 256, 1225, 1337, 1349, 1520
Hin6I GCGC 2 cut(s) 182, 348
HinP1I GCGC 2 cut(s) 182, 348
HincII GTYRAC 1 cut(s) 1893
HindII GTYRAC 1 cut(s) 1893
HindIII AAGCTT 1 cut(s) 1133
HinfI GANTC 6 cut(s) 438, 448, 1023, 1159, 1694, 1859
HpaII CCGG 3 cut(s) 379, 708, 1156
HphI GGTGA 4 cut(s) 1145, 1268, 1631, 1755
Hpy166II GTNNAC 6 cut(s) 247, 361, 1036, 1752, 1885, 1893
Hpy188I TCNGA 9 cut(s) 99, 238, 972, 1099, 1209, 1531, 1609, 1789, 1864
Hpy188III TCNNGA 4 cut(s) 680, 718, 798, 1238
Hpy8I GTNNAC 6 cut(s) 247, 361, 1036, 1752, 1885, 1893
Hpy99I CGWCG 3 cut(s) 359, 368, 1307
HpyAV CCTTC 6 cut(s) 431, 640, 686, 799, 1010, 1181
HpyCH4III ACNGT 9 cut(s) 30, 290, 412, 586, 622, 692, 904, 1066, 1235
HpyCH4IV ACGT 2 cut(s) 1032, 1889
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 605, 704, 1590, 1843
HpyF3I CTNAG 4 cut(s) 552, 778, 1463, 1772
HpySE526I ACGT 2 cut(s) 1032, 1889
Hsp92I GRCGYC 1 cut(s) 1032
Hsp92II CATG 5 cut(s) 256, 1225, 1337, 1349, 1520
HspAI GCGC 2 cut(s) 182, 348
Kzo9I GATC 7 cut(s) 42, 87, 458, 505, 870, 967, 1450
LmnI GCTCC 2 cut(s) 239, 926
Lsp1109I GCAGC 6 cut(s) 123, 210, 356, 472, 494, 557
LweI GCATC 5 cut(s) 557, 694, 988, 1169, 1937
MaeI CTAG 5 cut(s) 1010, 1082, 1314, 1322, 1842
MaeII ACGT 2 cut(s) 1032, 1889
MaeIII GTNAC 1 cut(s) 622
MalI GATC 7 cut(s) 44, 89, 460, 507, 872, 969, 1452
MboI GATC 7 cut(s) 42, 87, 458, 505, 870, 967, 1450
MboII GAAGA 7 cut(s) 25, 86, 500, 503, 532, 733, 1727
MfeI CAATTG 1 cut(s) 1523
MflI RGATCY 2 cut(s) 505, 967
MhlI GDGCHC 2 cut(s) 236, 1754
MluI ACGCGT 1 cut(s) 352
MlyI GAGTC 1 cut(s) 432
MmeI TCCRAC 5 cut(s) 162, 261, 811, 841, 1722
MroXI GAANNNNTTC 2 cut(s) 495, 1203
MseI TTAA 1 cut(s) 531
MspA1I CMGCKG 1 cut(s) 485
MspI CCGG 3 cut(s) 379, 708, 1156
MspR9I CCNGG 2 cut(s) 426, 1642
MunI CAATTG 1 cut(s) 1523
MvaI CCWGG 2 cut(s) 426, 1642
MvnI CGCG 1 cut(s) 354
MwoI GCNNNNNNNGC 5 cut(s) 224, 605, 704, 1590, 1843
NcoI CCATGG 1 cut(s) 1516
NdeII GATC 7 cut(s) 42, 87, 458, 505, 870, 967, 1450
NlaIII CATG 5 cut(s) 256, 1225, 1337, 1349, 1520
NlaIV GGNNCC 2 cut(s) 235, 1906
NmeAIII GCCGAG 1 cut(s) 634
NspV TTCGAA 1 cut(s) 1119
PaqCI CACCTGC 1 cut(s) 1774
PceI AGGCCT 2 cut(s) 1640, 1846
PdmI GAANNNNTTC 2 cut(s) 495, 1203
PfeI GAWTC 5 cut(s) 448, 1023, 1159, 1694, 1859
PflFI GACNNNGTC 1 cut(s) 242
PleI GAGTC 1 cut(s) 432
PpsI GAGTC 1 cut(s) 432
PshBI ATTAAT 1 cut(s) 531
PsiI TTATAA 2 cut(s) 957, 1139
Psp6I CCWGG 2 cut(s) 424, 1640
PspGI CCWGG 2 cut(s) 424, 1640
PspN4I GGNNCC 2 cut(s) 235, 1906
PspPI GGNCC 4 cut(s) 172, 217, 944, 1193
PstI CTGCAG 1 cut(s) 484
PstNI CAGNNNCTG 2 cut(s) 488, 1502
PsuI RGATCY 2 cut(s) 505, 967
PsyI GACNNNGTC 1 cut(s) 242
PvuII CAGCTG 1 cut(s) 485
RsaI GTAC 7 cut(s) 119, 666, 725, 1149, 1309, 1468, 1878
RsaNI GTAC 7 cut(s) 118, 665, 724, 1148, 1308, 1467, 1877
SaqAI TTAA 1 cut(s) 531
Sau3AI GATC 7 cut(s) 42, 87, 458, 505, 870, 967, 1450
Sau96I GGNCC 4 cut(s) 172, 217, 944, 1193
SchI GAGTC 1 cut(s) 432
ScrFI CCNGG 2 cut(s) 426, 1642
SduI GDGCHC 2 cut(s) 236, 1754
SfaNI GCATC 5 cut(s) 557, 694, 988, 1169, 1937
SfcI CTRYAG 5 cut(s) 411, 480, 1086, 1183, 1546
SfiI GGCCNNNNNGGCC 1 cut(s) 224
SfuI TTCGAA 1 cut(s) 1119
SinI GGWCC 3 cut(s) 172, 944, 1193
SmlI CTYRAG 1 cut(s) 718
SmoI CTYRAG 1 cut(s) 718
SseBI AGGCCT 2 cut(s) 1640, 1846
SsiI CCGC 8 cut(s) 83, 282, 306, 309, 325, 1581, 1835, 1926
SspMI CTAG 5 cut(s) 1010, 1082, 1314, 1322, 1842
StuI AGGCCT 2 cut(s) 1640, 1846
StyD4I CCNGG 2 cut(s) 424, 1640
StyI CCWWGG 2 cut(s) 228, 1516
TaaI ACNGT 9 cut(s) 30, 290, 412, 586, 622, 692, 904, 1066, 1235
TaiI ACGT 2 cut(s) 1035, 1892
TaqI TCGA 3 cut(s) 1119, 1632, 1680
TatI WGTACW 3 cut(s) 117, 664, 1147
TauI GCSGC 4 cut(s) 308, 311, 1584, 1837
TfiI GAWTC 5 cut(s) 448, 1023, 1159, 1694, 1859
Tru1I TTAA 1 cut(s) 531
Tru9I TTAA 1 cut(s) 531
TscAI CASTG 5 cut(s) 33, 266, 397, 954, 1600
TseI GCWGC 6 cut(s) 111, 198, 369, 482, 485, 545
TspDTI ATGAA 5 cut(s) 20, 1140, 1230, 1698, 1722
TspRI CASTG 5 cut(s) 33, 266, 397, 954, 1600
Tth111I GACNNNGTC 1 cut(s) 242
VneI GTGCAC 1 cut(s) 1750
VpaK11BI GGWCC 3 cut(s) 172, 944, 1193
VspI ATTAAT 1 cut(s) 531
XagI CCTNNNNNAGG 1 cut(s) 1634
XapI RAATTY 4 cut(s) 988, 1244, 1340, 1622
XmiI GTMKAC 3 cut(s) 246, 360, 1035
XmnI GAANNNNTTC 2 cut(s) 495, 1203
XspI CTAG 5 cut(s) 1010, 1082, 1314, 1322, 1842
ZraI GACGTC 1 cut(s) 1033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.