Rh1DG015700

Belongs to the chalcone stilbene synthases family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000409
Physical Location & Seq
Reverse (-)
2663749 .. 2665119
1371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG015700.1

Sequence Viewer

Length: 1170 bp
ATGGTGACCGTCGAGGAAGTCCGCAAGGCTCAACGCGCTGAAGGTCCAGCCACCGTCTTGGCCATCGGGACAGCCACTCCTCCCAACTGTATTGACCAGAGCACATACCCCGACTACTATTTTCGTATCACCAACAGCGAGCACAAGGCTGAGCTCAAGGAGAAATTCCAGCGCATGTGTGACAAATCTATGATCAAGAAGCGTTACATGTATTTGACTGAAGAAATTCTCAAAGAGAATCCTAGTATGTGTGAGTACATGGCTCCTTCACTTGATGCAAGACAAGACATGGTGGTTGTTGAAATTCCAAAGCTTGGAAAAGAGGCTGCCACTAAGGCCATTAAAGAATGGGGTCAACCCAAGTCCAAAATCACCCACTTGGTCTTTTGTACCACTAGTGGTGTCGACATGCCTGGGGCCGATTACCAGCTCACTAAGCTCTTGGGCCTCCGCCCGTCCGTCAAGCGTCTCATGATGTACCAGCAAGGGTGTTTCGCCGGAGGCACGGTGCTCCGGTTGGCTAAGGACTTGGCCGAGAACAACAAGGGTGCACGTGTTCTTGTTGTTTGCTCAGAGATAACTGCAGTTACATTCCGTGGGCCTAGCGACACTCATCTCGATAGTCTTGTGGGCCAAGCCTTGTTCGGTGATGGTGCTGCGGCCATTATTGTTGGGGCCGACCCATTGCCTGAGGTTGAGAAGCCTTTGTTCGAGTTGGTCTCGGCAGCTCAAACTATCCTCCCTGATAGTGACGGAGCCATTGACGGGCATCTTCGTGAAGTTGGGCTCACATTTCACCTCCTCAAAGATGTTCCTGGGCTGATTTCGAAGAACATCGAGAAGAGCCTCAATGAGGCCTTCAAACCTTTGAACATCACGGATTGGAACTCACTTTTCTGGATTGCACACCCGGGTGGCCCTGCAATTTTGGACCAAGTAGAGGCTAAATTGGGCCTGAAGCCCGAAAAGCTAGAAGCCACAAGGCATATACTATCCGAGTACGGCAACATGTCTAGTGCTTGTGTGTTGTTTATTTTGGACGAGGTGAGGAGGAAGTCTGCAGCTAATGGGCACAAGACCACCGGAGAAGGCTTGGAGTGGGGTGTTCTATTTGGGTTTGGGCCTGGGCTCACCGTCGAGACTGTTGTGCTTCACAGTGTGGCTGCTTAA

Protein Analysis

389

Amino Acids

42.51

Weight (kDa)

6.04

Isoelectric Point (pI)

38.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chal_sti_synt_N PF00195 5 - 228 6.9e-125 Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C PF02797 238 - 387 8.1e-71 Chalcone and stilbene synthases, C-terminal domain
ACP_syn_III_C PF08541 301 - 384 3.1e-06 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13930
fragaria_vesca FvH4_2g28040 FvH4_2g28050 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160
malus_domestica MD04G1003000.v1.1 MD04G1003300.v1.1 MD04G1003400.v1.1 MD04G1111500.v1.1 MD08G1116200.v1.1 MD13G1285100.v1.1 MD14G1160800.v1.1 MD14G1160900.v1.1 MD15G1131700.v1.1 MD15G1132000.v1.1 MD15G1132100.v1.1 MD15G1132200.v1.1 MD15G1132300.v1.1
prunus_persica Prupe.1G002900_v2.0.a1 Prupe.1G002900_v2.0.a1 Prupe.1G003000_v2.0.a1 Prupe.4G252100_v2.0.a1 Prupe.4G252800_v2.0.a1 Prupe.4G253000_v2.0.a1 Prupe.4G253100_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005800_v2.0.a1
pyrus_communis pycom04g00310 pycom04g00320 pycom04g00350 pycom13g10200 pycom15g11900 pycom15g11910 pycom15g11920 pycom15g11930 pycom15g11940 pycom420g00730
rosa_chinensis RchiOBHm_Chr1g0316441 RchiOBHm_Chr1g0316451 RchiOBHm_Chr1g0316461 RchiOBHm_Chr4g0399981 RchiOBHm_Chr6g0296951 RchiOBHm_Chr6g0297001 RchiOBHm_Chr6g0297011
rosa_laevigata RLG00000009221 RLG00000011646 RLG00000030671 RLG00000030673
rosa_multiflora Rmu_co8031452.1_g000001 Rmu_co8152518.1_g000001 Rmu_sc0000081.1_g000010 Rmu_sc0004672.1_g000001 Rmu_sc0006453.1_g000028 Rmu_sc0006790.1_g000004 Rmu_sc0007272.1_g000004 Rmu_sc0023107.1_g000002 Rmu_sc0023714.1_g000001
rosa_roxburghii Rroxscaffold_4G00330980 Rroxscaffold_4G00330990 Rroxscaffold_4G00331000 Rroxscaffold_7G00171030
rosa_rugosa Rorug01G0010500 Rorug01G0010600 Rorug01G0011000 Rorug03G0299400 Rorug03G0299500 Rorug04G0022100 Rorug05G0381700 Rorug06G0267700
rosa_samantha Rh1AG020500 Rh1BG015600 Rh1BG015800 Rh1CG018400 Rh1CG018600 Rh1CG018800 Rh1DG015500 Rh1DG015700 Rh1DG015900 Rh4AG097700 Rh4BG095700 Rh4CG106900 Rh4DG092500 Rh6AG378300 Rh6BG386300 Rh6CG392100 Rh6CG392300 Rh6DG379000
rosa_wichuraiana Rw0G010230 Rw1G001330 Rw1G001340 Rw4G008110 Rw4G013630 Rw6G033070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 314
AccI GTMKAC 1 cut(s) 405
AccII CGCG 1 cut(s) 36
AciI CCGC 3 cut(s) 22, 451, 659
AcoI YGGCCR 3 cut(s) 60, 531, 660
AcsI RAATTY 3 cut(s) 164, 225, 303
AcuI CTGAAG 3 cut(s) 60, 240, 977
AcvI CACGTG 1 cut(s) 554
AdeI CACNNNGTG 1 cut(s) 1159
AfaI GTAC 4 cut(s) 257, 391, 479, 1001
AfiI CCNNNNNNNGG 4 cut(s) 314, 765, 853, 940
AflIII ACRYGT 3 cut(s) 207, 553, 1008
AgsI TTSAA 3 cut(s) 302, 862, 871
AhlI ACTAGT 1 cut(s) 395
AjnI CCWGG 3 cut(s) 412, 814, 1123
AleI CACNNNNGTG 1 cut(s) 912
AluBI AGCT 7 cut(s) 154, 313, 430, 439, 728, 970, 1064
AluI AGCT 7 cut(s) 154, 313, 430, 439, 728, 970, 1064
Alw21I GWGCWC 5 cut(s) 104, 144, 156, 513, 553
Alw26I GTCTC 3 cut(s) 473, 724, 1133
Alw44I GTGCAC 1 cut(s) 549
Ama87I CYCGRG 1 cut(s) 910
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 5 cut(s) 326, 656, 725, 1061, 1163
ApoI RAATTY 3 cut(s) 164, 225, 303
Asp700I GAANNNNTTC 1 cut(s) 225
AspLEI GCGC 2 cut(s) 38, 174
AsuC2I CCSGG 2 cut(s) 911, 912
AsuHPI GGTGA 7 cut(s) 16, 121, 364, 659, 788, 1057, 1123
AsuII TTCGAA 1 cut(s) 827
AvaI CYCGRG 1 cut(s) 910
AvaII GGWCC 2 cut(s) 44, 931
AxyI CCTNAGG 1 cut(s) 690
BaeGI GKGCMC 2 cut(s) 553, 1074
BalI TGGCCA 1 cut(s) 62
BanII GRGCYC 3 cut(s) 156, 789, 1131
BbrPI CACGTG 1 cut(s) 554
Bbv12I GWGCWC 5 cut(s) 104, 144, 156, 513, 553
BbvI GCAGC 5 cut(s) 313, 643, 737, 1073, 1150
BccI CCATC 2 cut(s) 71, 644
BceAI ACGGC 1 cut(s) 1018
BciT130I CCWGG 3 cut(s) 414, 816, 1125
BclI TGATCA 1 cut(s) 192
BcnI CCSGG 2 cut(s) 911, 912
BcoDI GTCTC 3 cut(s) 473, 724, 1133
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 5 cut(s) 243, 396, 603, 971, 1014
BfmI CTRYAG 2 cut(s) 582, 1059
BglI GCCNNNNNGGC 1 cut(s) 335
BisI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 6 cut(s) 328, 658, 661, 727, 1063, 1165
Bme1390I CCNGG 5 cut(s) 414, 816, 911, 912, 1125
Bme18I GGWCC 2 cut(s) 44, 931
BmeT110I CYCGRG 1 cut(s) 910
BmiI GGNNCC 4 cut(s) 264, 418, 676, 757
BmrFI CCNGG 5 cut(s) 414, 816, 911, 912, 1125
BmsI GCATC 2 cut(s) 265, 778
BplI GAGNNNNNCTC 2 cut(s) 704, 736
Bpu10I CCTNAGC 1 cut(s) 522
Bpu1102I GCTNAGC 1 cut(s) 150
Bpu14I TTCGAA 1 cut(s) 827
BpuEI CTTGAG 1 cut(s) 140
BpuMI CCSGG 2 cut(s) 911, 912
BsaAI YACGTR 1 cut(s) 554
BsaI GGTCTC 1 cut(s) 724
BsaJI CCNNGG 5 cut(s) 413, 595, 815, 910, 1124
BsaWI WCCGGW 2 cut(s) 513, 1082
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 492, 522
Bsc4I CCNNNNNNNGG 4 cut(s) 314, 765, 853, 940
Bse21I CCTNAGG 1 cut(s) 690
Bse3DI GCAATG 1 cut(s) 683
BseBI CCWGG 3 cut(s) 414, 816, 1125
BseDI CCNNGG 5 cut(s) 413, 595, 815, 910, 1124
BseLI CCNNNNNNNGG 4 cut(s) 314, 765, 853, 940
BseMI GCAATG 1 cut(s) 683
BseMII CTCAG 3 cut(s) 141, 585, 681
BseRI GAGGAG 3 cut(s) 69, 791, 1063
BseSI GKGCMC 2 cut(s) 553, 1074
BseXI GCAGC 5 cut(s) 313, 643, 737, 1073, 1150
Bsh1236I CGCG 1 cut(s) 36
BsiHKAI GWGCWC 5 cut(s) 104, 144, 156, 513, 553
BsiHKCI CYCGRG 1 cut(s) 910
BsiSI CCGG 4 cut(s) 498, 514, 911, 1083
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 4 cut(s) 314, 765, 853, 940
BsmAI GTCTC 3 cut(s) 473, 724, 1133
BsmBI CGTCTC 1 cut(s) 473
BsmFI GGGAC 1 cut(s) 82
Bso31I GGTCTC 1 cut(s) 724
BsoBI CYCGRG 1 cut(s) 910
Bsp119I TTCGAA 1 cut(s) 827
Bsp1286I GDGCHC 8 cut(s) 104, 144, 156, 513, 553, 789, 1074, 1131
Bsp143I GATC 1 cut(s) 192
Bsp1720I GCTNAGC 1 cut(s) 150
BspACI CCGC 3 cut(s) 22, 451, 659
BspCNI CTCAG 3 cut(s) 142, 584, 682
BspFNI CGCG 1 cut(s) 36
BspHI TCATGA 1 cut(s) 471
BspLI GGNNCC 4 cut(s) 264, 418, 676, 757
BspMAI CTGCAG 2 cut(s) 586, 1063
BspQI GCTCTTC 1 cut(s) 836
BspT104I TTCGAA 1 cut(s) 827
BspTNI GGTCTC 1 cut(s) 724
BsrDI GCAATG 1 cut(s) 683
BssECI CCNNGG 5 cut(s) 413, 595, 815, 910, 1124
BssMI GATC 1 cut(s) 192
Bst2UI CCWGG 3 cut(s) 414, 816, 1125
Bst4CI ACNGT 7 cut(s) 10, 55, 89, 508, 1135, 1144, 1157
Bst6I CTCTTC 1 cut(s) 836
BstBAI YACGTR 1 cut(s) 554
BstBI TTCGAA 1 cut(s) 827
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 6 cut(s) 150, 333, 435, 522, 571, 690
BstDSI CCRYGG 1 cut(s) 595
BstEII GGTNACC 1 cut(s) 4
BstENI CCTNNNNNAGG 1 cut(s) 851
BstFNI CGCG 1 cut(s) 36
BstHHI GCGC 2 cut(s) 38, 174
BstKTI GATC 1 cut(s) 195
BstMAI GTCTC 3 cut(s) 473, 724, 1133
BstMBI GATC 1 cut(s) 192
BstMWI GCNNNNNNNGC 4 cut(s) 35, 335, 436, 967
BstNI CCWGG 3 cut(s) 414, 816, 1125
BstNSI RCATGY 4 cut(s) 178, 211, 412, 1012
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 5 cut(s) 412, 814, 909, 910, 1123
BstSFI CTRYAG 2 cut(s) 582, 1059
BstSLI GKGCMC 2 cut(s) 553, 1074
BstUI CGCG 1 cut(s) 36
BstV1I GCAGC 5 cut(s) 313, 643, 737, 1073, 1150
BstXI CCANNNNNNTGG 1 cut(s) 58
Bsu36I CCTNAGG 1 cut(s) 690
BtgI CCRYGG 1 cut(s) 595
BtsIMutI CAGTG 1 cut(s) 1162
Cac8I GCNNGC 1 cut(s) 140
CciI TCATGA 1 cut(s) 471
CfoI GCGC 2 cut(s) 38, 174
Cfr9I CCCGGG 1 cut(s) 910
CseI GACGC 1 cut(s) 455
Csp6I GTAC 4 cut(s) 256, 390, 478, 1000
CviAII CATG 7 cut(s) 175, 208, 259, 289, 409, 472, 1009
CviQI GTAC 4 cut(s) 256, 390, 478, 1000
DdeI CTNAG 6 cut(s) 150, 333, 435, 522, 571, 690
DpnI GATC 1 cut(s) 194
DpnII GATC 1 cut(s) 192
DraIII CACNNNGTG 1 cut(s) 1159
EaeI YGGCCR 3 cut(s) 60, 531, 660
Eam1104I CTCTTC 1 cut(s) 836
EarI CTCTTC 1 cut(s) 836
EciI GGCGGA 1 cut(s) 440
Ecl136II GAGCTC 1 cut(s) 154
Eco147I AGGCCT 1 cut(s) 857
Eco24I GRGCYC 3 cut(s) 156, 789, 1131
Eco31I GGTCTC 1 cut(s) 724
Eco47I GGWCC 2 cut(s) 44, 931
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 3 cut(s) 60, 240, 977
Eco72I CACGTG 1 cut(s) 554
Eco81I CCTNAGG 1 cut(s) 690
Eco88I CYCGRG 1 cut(s) 910
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 154
EcoNI CCTNNNNNAGG 1 cut(s) 851
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 3 cut(s) 412, 814, 1123
EcoT38I GRGCYC 3 cut(s) 156, 789, 1131
Esp3I CGTCTC 1 cut(s) 473
FaeI CATG 7 cut(s) 178, 211, 262, 292, 412, 475, 1012
FaqI GGGAC 1 cut(s) 82
FatI CATG 7 cut(s) 174, 207, 258, 288, 408, 471, 1008
FbaI TGATCA 1 cut(s) 192
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
FriOI GRGCYC 3 cut(s) 156, 789, 1131
Fsp4HI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
FspBI CTAG 5 cut(s) 243, 396, 603, 971, 1014
GlaI GCGC 2 cut(s) 37, 173
GluI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
HapII CCGG 4 cut(s) 498, 514, 911, 1083
HgaI GACGC 1 cut(s) 455
HhaI GCGC 2 cut(s) 38, 174
Hin1II CATG 7 cut(s) 178, 211, 262, 292, 412, 475, 1012
Hin6I GCGC 2 cut(s) 36, 172
HinP1I GCGC 2 cut(s) 36, 172
HincII GTYRAC 2 cut(s) 356, 406
HindII GTYRAC 2 cut(s) 356, 406
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 1 cut(s) 238
HpaII CCGG 4 cut(s) 498, 514, 911, 1083
HphI GGTGA 7 cut(s) 16, 121, 364, 659, 788, 1057, 1123
Hpy166II GTNNAC 3 cut(s) 356, 406, 551
Hpy188I TCNGA 2 cut(s) 574, 997
Hpy188III TCNNGA 8 cut(s) 67, 196, 472, 617, 776, 838, 898, 1138
Hpy8I GTNNAC 3 cut(s) 356, 406, 551
Hpy99I CGWCG 2 cut(s) 14, 1139
HpyAV CCTTC 4 cut(s) 35, 276, 868, 1082
HpyCH4III ACNGT 7 cut(s) 10, 55, 89, 508, 1135, 1144, 1157
HpyCH4IV ACGT 1 cut(s) 553
HpyCH4V TGCA 6 cut(s) 278, 551, 584, 905, 923, 1061
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 335, 436, 967
HpyF3I CTNAG 6 cut(s) 150, 333, 435, 522, 571, 690
HpySE526I ACGT 1 cut(s) 553
Hsp92II CATG 7 cut(s) 178, 211, 262, 292, 412, 475, 1012
HspAI GCGC 2 cut(s) 36, 172
Ksp22I TGATCA 1 cut(s) 192
Kzo9I GATC 1 cut(s) 192
LguI GCTCTTC 1 cut(s) 836
LmnI GCTCC 3 cut(s) 268, 516, 755
Lsp1109I GCAGC 5 cut(s) 313, 643, 737, 1073, 1150
LweI GCATC 2 cut(s) 265, 778
MaeI CTAG 5 cut(s) 243, 396, 603, 971, 1014
MaeII ACGT 1 cut(s) 553
MaeIII GTNAC 5 cut(s) 4, 179, 203, 586, 749
MalI GATC 1 cut(s) 194
MboI GATC 1 cut(s) 192
MboII GAAGA 4 cut(s) 233, 764, 841, 853
MhlI GDGCHC 8 cut(s) 104, 144, 156, 513, 553, 789, 1074, 1131
MlsI TGGCCA 1 cut(s) 62
MluCI AATT 5 cut(s) 164, 225, 303, 924, 947
MluNI TGGCCA 1 cut(s) 62
Mox20I TGGCCA 1 cut(s) 62
MroXI GAANNNNTTC 1 cut(s) 225
MscI TGGCCA 1 cut(s) 62
MseI TTAA 2 cut(s) 342, 1168
MslI CAYNNNNRTG 2 cut(s) 774, 912
Msp20I TGGCCA 1 cut(s) 62
MspI CCGG 4 cut(s) 498, 514, 911, 1083
MspR9I CCNGG 5 cut(s) 414, 816, 911, 912, 1125
MvaI CCWGG 3 cut(s) 414, 816, 1125
MvnI CGCG 1 cut(s) 36
MwoI GCNNNNNNNGC 4 cut(s) 35, 335, 436, 967
NciI CCSGG 2 cut(s) 911, 912
NdeII GATC 1 cut(s) 192
NlaIII CATG 7 cut(s) 178, 211, 262, 292, 412, 475, 1012
NlaIV GGNNCC 4 cut(s) 264, 418, 676, 757
NmeAIII GCCGAG 2 cut(s) 559, 701
NmuCI GTSAC 3 cut(s) 4, 179, 749
NspI RCATGY 4 cut(s) 178, 211, 412, 1012
NspV TTCGAA 1 cut(s) 827
OliI CACNNNNGTG 1 cut(s) 912
PagI TCATGA 1 cut(s) 471
PceI AGGCCT 1 cut(s) 857
PciI ACATGT 2 cut(s) 207, 1008
PciSI GCTCTTC 1 cut(s) 836
PdmI GAANNNNTTC 1 cut(s) 225
PfeI GAWTC 1 cut(s) 238
PflMI CCANNNNNTGG 1 cut(s) 314
PkrI GCNGC 6 cut(s) 328, 658, 661, 727, 1063, 1165
PmaCI CACGTG 1 cut(s) 554
PmlI CACGTG 1 cut(s) 554
Ppu21I YACGTR 1 cut(s) 554
PscI ACATGT 2 cut(s) 207, 1008
Psp124BI GAGCTC 1 cut(s) 156
Psp6I CCWGG 3 cut(s) 412, 814, 1123
PspCI CACGTG 1 cut(s) 554
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 3 cut(s) 412, 814, 1123
PspN4I GGNNCC 4 cut(s) 264, 418, 676, 757
PstI CTGCAG 2 cut(s) 586, 1063
RsaI GTAC 4 cut(s) 257, 391, 479, 1001
RsaNI GTAC 4 cut(s) 256, 390, 478, 1000
RseI CAYNNNNRTG 2 cut(s) 774, 912
SacI GAGCTC 1 cut(s) 156
SalI GTCGAC 1 cut(s) 404
SapI GCTCTTC 1 cut(s) 836
SaqAI TTAA 2 cut(s) 342, 1168
SatI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
Sau3AI GATC 1 cut(s) 192
ScrFI CCNGG 5 cut(s) 414, 816, 911, 912, 1125
SduI GDGCHC 8 cut(s) 104, 144, 156, 513, 553, 789, 1074, 1131
SfaNI GCATC 2 cut(s) 265, 778
SfcI CTRYAG 2 cut(s) 582, 1059
SfuI TTCGAA 1 cut(s) 827
SinI GGWCC 2 cut(s) 44, 931
SmaI CCCGGG 1 cut(s) 912
SmiMI CAYNNNNRTG 2 cut(s) 774, 912
SmlI CTYRAG 1 cut(s) 155
SmoI CTYRAG 1 cut(s) 155
SpeI ACTAGT 1 cut(s) 395
Sse9I AATT 5 cut(s) 164, 225, 303, 924, 947
SseBI AGGCCT 1 cut(s) 857
SsiI CCGC 3 cut(s) 22, 451, 659
SspMI CTAG 5 cut(s) 243, 396, 603, 971, 1014
SstI GAGCTC 1 cut(s) 156
StuI AGGCCT 1 cut(s) 857
StyD4I CCNGG 5 cut(s) 412, 814, 909, 910, 1123
TaaI ACNGT 7 cut(s) 10, 55, 89, 508, 1135, 1144, 1157
TaiI ACGT 1 cut(s) 556
TaqI TCGA 7 cut(s) 12, 405, 618, 711, 827, 837, 1137
TasI AATT 5 cut(s) 164, 225, 303, 924, 947
TatI WGTACW 1 cut(s) 255
TauI GCSGC 1 cut(s) 662
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 2 cut(s) 342, 1168
Tru9I TTAA 2 cut(s) 342, 1168
TscAI CASTG 1 cut(s) 1162
TseFI GTSAC 3 cut(s) 4, 179, 749
TseI GCWGC 5 cut(s) 326, 656, 725, 1061, 1163
Tsp45I GTSAC 3 cut(s) 4, 179, 749
TspGWI ACGGA 4 cut(s) 448, 584, 768, 893
TspMI CCCGGG 1 cut(s) 910
TspRI CASTG 1 cut(s) 1162
Van91I CCANNNNNTGG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 2 cut(s) 44, 931
XagI CCTNNNNNAGG 1 cut(s) 851
XapI RAATTY 3 cut(s) 164, 225, 303
XceI RCATGY 4 cut(s) 178, 211, 412, 1012
XmaI CCCGGG 1 cut(s) 910
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 5 cut(s) 243, 396, 603, 971, 1014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.