FvH4_1g12130

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000471
Physical Location & Seq
Reverse (-)
6624159 .. 6625792
1634 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g12130.t1

Sequence Viewer

Length: 1488 bp
ATGTTTACTCTCAATCCCAAAGATATGTCAACCACAGCATCCACATTGTTCTCAGCCTATGCCTCCTTTGCTGCATCAATGATGCTGATCCGCTCCATTACAGACCAACTCTTCCCCTGCCAGTTCCGCTCATACATATACTCATTCTTCGGTCACTTTTTCACCACTCCCTCCTCAAACCTTACTTTGATCGTTGAAGAGTGCTGTGGCATGACACGAAACCAAGTCTATGATGCTGCGGAGGTGTACCTCCAAACAAAGATCAGTCCTCTCACCGAACGCCTCAAAATTAGCAAAACACCAAGGAAAAAGAGCATTAGCATTGCCATGGAAAAAGGTGAAGAAATCACCGACACCTATAACAATGACATCGAATTGAAGTGGCGCTTCACCGAGCCTGAGAAAAAACAGGACGAGTATCACCCTGCCAATGACAACAAGCGACGGTTTGAGCTAGTGTTTGACAAGAAACACAGGGACATAGTGATGGACTCTTACTTGCCCTATGTTTTTGCTCGAGCTAAAGCCATTCAAGAAGAGGAAAAAGTTGTTAGACTTTACACCCGGGATTCAAGTCTAGGGGACGATGATGACAATAACAGGAATTCAAGCGGTTGGGGTTCCATAAGAATGGAGCATCCATCTAATTTTGGAACAATGGCGATGGATCCTGAGCTTAAGAGAATGGTTATTGATGACTTGGATAGGTTTGTCAGGAGGAGGGAGTTTTACAAAAGGGTTGGTAAGGCTTGGAAGAGAGGGTATTTGTTATACGGTCCACCTGGTACAGGCAAATCGAGCTTGATTGCAGCCATGGCTAACTATCTCAAGTTTGATGTCTATGATTTAGAGCTTTCTAGCATTCACAGTAATTGTGAATTGAGGAGGGTATTGCTTTCTACATCAAATCGTTCTATTCTGGTGATTGAGGATATTGATTGCTGCGCCAAAGTGCAAACCAGGGGAAGTGAACCGGATCCACGGATGTATCAAGCTCATAACAACAGGTTGACACTATCAGGCCTACTGAACTTCATAGATGGTCTGTGGTCAAGCTGCGGGGATGAGAGAATCATAGTGTTCACCACCAACCACAAGGATAGGCTAGACCCTGCATTGTTGCGTCCGGGTCGAATGGACATGCACATTCACATGTCGTATTGCACCCCAAGCGGGTTCAGAGTCTTAGCCTCTAACTACCTCGGCATTCATGAAAGCAACCCTCATCTCCTCTGCAGAGAAATTGAAGGGTTGATAGAGAGCACTGAGGTCACCCCTGCAGATGTTGCTGAGGAGCTCATGAAGAGTGATGATGCTGATGTTACTCTCAAAGGGCTTGTCAATTTCCTCAAGAAAAAGAAGGTTGAGAATGATAAAATGAAGGAACAAGGGGCCGAGAAAACTGAAGATCAAGAACCAGAGAACGAGCCATTTCCGGATGACAATTTACCTGATGTTTATGGCTATGGCTTTGGCTTATTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

496

Amino Acids

56.88

Weight (kDa)

5.62

Isoelectric Point (pI)

48.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 38 - 131 2.4e-23 Domain associated at C-terminal with AAA
AAA PF00004 255 - 386 3.9e-20 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 388 - 461 3.1e-23 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18190 AT2G18193
fragaria_vesca FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 93, 129
AccIII TCCGGA 1 cut(s) 1435
AciI CCGC 6 cut(s) 91, 127, 239, 612, 1059, 1173
AclWI GGATC 5 cut(s) 82, 662, 675, 971, 984
AcsI RAATTY 1 cut(s) 604
AcuI CTGAAG 1 cut(s) 1425
AfaI GTAC 2 cut(s) 248, 787
AfiI CCNNNNNNNGG 2 cut(s) 788, 1173
AflII CTTAAG 1 cut(s) 677
AflIII ACRYGT 1 cut(s) 1152
AgsI TTSAA 6 cut(s) 197, 379, 533, 573, 609, 1247
AjnI CCWGG 2 cut(s) 781, 959
AluBI AGCT 8 cut(s) 454, 521, 676, 801, 853, 995, 1056, 1297
AluI AGCT 8 cut(s) 454, 521, 676, 801, 853, 995, 1056, 1297
Alw21I GWGCWC 2 cut(s) 1265, 1299
AlwI GGATC 5 cut(s) 82, 662, 675, 971, 984
Ama87I CYCGRG 2 cut(s) 516, 564
Aor13HI TCCGGA 1 cut(s) 1435
AoxI GGCC 2 cut(s) 1021, 1392
ApeKI GCWGC 5 cut(s) 71, 236, 809, 942, 1056
ApoI RAATTY 1 cut(s) 604
ArsI GACNNNNNNTTYG 2 cut(s) 1323, 1355
AspLEI GCGC 2 cut(s) 387, 947
AspS9I GGNCC 2 cut(s) 776, 1392
AsuC2I CCSGG 3 cut(s) 565, 566, 1128
AsuHPI GGTGA 9 cut(s) 154, 265, 340, 350, 382, 413, 934, 1075, 1264
AvaI CYCGRG 2 cut(s) 516, 564
AvaII GGWCC 1 cut(s) 776
BaeI ACNNNNGTAYC 2 cut(s) 971, 1004
BamHI GGATCC 2 cut(s) 667, 976
BanII GRGCYC 1 cut(s) 1299
Bbv12I GWGCWC 2 cut(s) 1265, 1299
BbvCI CCTCAGC 1 cut(s) 1290
BbvI GCAGC 5 cut(s) 58, 223, 821, 929, 1043
BccI CCATC 4 cut(s) 481, 649, 658, 1034
BciT130I CCWGG 2 cut(s) 783, 961
BcnI CCSGG 3 cut(s) 565, 566, 1128
BfaI CTAG 4 cut(s) 455, 578, 858, 1106
BfmI CTRYAG 2 cut(s) 1234, 1278
BfoI RGCGCY 1 cut(s) 388
BfrI CTTAAG 1 cut(s) 677
BisI GCNGC 5 cut(s) 72, 237, 810, 943, 1057
BlsI GCNGC 5 cut(s) 73, 238, 811, 944, 1058
Bme1390I CCNGG 5 cut(s) 565, 566, 783, 961, 1128
Bme18I GGWCC 1 cut(s) 776
BmeT110I CYCGRG 2 cut(s) 516, 564
BmgT120I GGNCC 2 cut(s) 776, 1392
BmiI GGNNCC 4 cut(s) 622, 669, 978, 1393
BmrFI CCNGG 5 cut(s) 565, 566, 783, 961, 1128
BmsI GCATC 6 cut(s) 47, 72, 83, 223, 646, 1303
Bpu10I CCTNAGC 2 cut(s) 672, 1290
BpuEI CTTGAG 2 cut(s) 812, 1334
BpuMI CCSGG 3 cut(s) 565, 566, 1128
BsaBI GATNNNNATC 1 cut(s) 86
BsaJI CCNNGG 7 cut(s) 302, 327, 564, 813, 960, 980, 1201
BsaWI WCCGGW 2 cut(s) 973, 1435
Bsc4I CCNNNNNNNGG 2 cut(s) 788, 1173
Bse1I ACTGG 1 cut(s) 121
Bse3DI GCAATG 1 cut(s) 321
Bse8I GATNNNNATC 1 cut(s) 86
BseAI TCCGGA 1 cut(s) 1435
BseBI CCWGG 2 cut(s) 783, 961
BseDI CCNNGG 7 cut(s) 302, 327, 564, 813, 960, 980, 1201
BseGI GGATG 5 cut(s) 38, 637, 990, 1069, 1444
BseJI GATNNNNATC 1 cut(s) 86
BseLI CCNNNNNNNGG 2 cut(s) 788, 1173
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 5 cut(s) 66, 390, 663, 1257, 1281
BseNI ACTGG 1 cut(s) 121
BseRI GAGGAG 5 cut(s) 163, 733, 898, 1220, 1307
BseXI GCAGC 5 cut(s) 58, 223, 821, 929, 1043
BshFI GGCC 2 cut(s) 1023, 1394
BsiHKAI GWGCWC 2 cut(s) 1265, 1299
BsiHKCI CYCGRG 2 cut(s) 516, 564
BsiSI CCGG 4 cut(s) 565, 974, 1127, 1436
BslFI GGGAC 2 cut(s) 491, 596
BslI CCNNNNNNNGG 2 cut(s) 788, 1173
BsmFI GGGAC 2 cut(s) 491, 596
BsmI GAATGC 2 cut(s) 861, 1206
BsnI GGCC 2 cut(s) 1023, 1394
BsoBI CYCGRG 2 cut(s) 516, 564
Bsp1286I GDGCHC 2 cut(s) 1265, 1299
Bsp13I TCCGGA 1 cut(s) 1435
Bsp143I GATC 6 cut(s) 87, 189, 261, 667, 976, 1408
Bsp19I CCATGG 2 cut(s) 327, 813
BspACI CCGC 6 cut(s) 91, 127, 239, 612, 1059, 1173
BspANI GGCC 2 cut(s) 1023, 1394
BspCNI CTCAG 5 cut(s) 65, 391, 664, 1258, 1282
BspEI TCCGGA 1 cut(s) 1435
BspHI TCATGA 2 cut(s) 1210, 1299
BspLI GGNNCC 4 cut(s) 622, 669, 978, 1393
BspMAI CTGCAG 2 cut(s) 1238, 1282
BspPI GGATC 5 cut(s) 82, 662, 675, 971, 984
BspTI CTTAAG 1 cut(s) 677
BsrBI CCGCTC 2 cut(s) 93, 129
BsrDI GCAATG 1 cut(s) 321
BsrI ACTGG 1 cut(s) 121
BssECI CCNNGG 7 cut(s) 302, 327, 564, 813, 960, 980, 1201
BssMI GATC 6 cut(s) 87, 189, 261, 667, 976, 1408
BssT1I CCWWGG 3 cut(s) 302, 327, 813
Bst2UI CCWGG 2 cut(s) 783, 961
Bst4CI ACNGT 3 cut(s) 447, 776, 869
Bst6I CTCTTC 5 cut(s) 116, 192, 531, 749, 1298
BstAFI CTTAAG 1 cut(s) 677
BstAPI GCANNNNNTGC 1 cut(s) 1286
BstDEI CTNAG 6 cut(s) 52, 399, 672, 1186, 1266, 1290
BstDSI CCRYGG 3 cut(s) 327, 813, 980
BstEII GGTNACC 1 cut(s) 1270
BstENI CCTNNNNNAGG 1 cut(s) 786
BstF5I GGATG 5 cut(s) 38, 637, 990, 1069, 1444
BstH2I RGCGCY 1 cut(s) 388
BstHHI GCGC 2 cut(s) 387, 947
BstKTI GATC 6 cut(s) 90, 192, 264, 670, 979, 1411
BstMBI GATC 6 cut(s) 87, 189, 261, 667, 976, 1408
BstMWI GCNNNNNNNGC 6 cut(s) 68, 126, 798, 815, 1170, 1286
BstNI CCWGG 2 cut(s) 783, 961
BstNSI RCATGY 2 cut(s) 1144, 1156
BstPI GGTNACC 1 cut(s) 1270
BstSCI CCNGG 5 cut(s) 563, 564, 781, 959, 1126
BstSFI CTRYAG 2 cut(s) 1234, 1278
BstV1I GCAGC 5 cut(s) 58, 223, 821, 929, 1043
BstX2I RGATCY 2 cut(s) 667, 976
BstXI CCANNNNNNTGG 1 cut(s) 631
BstYI RGATCY 2 cut(s) 667, 976
BsuRI GGCC 2 cut(s) 1023, 1394
BtgI CCRYGG 3 cut(s) 327, 813, 980
BtgZI GCGATG 1 cut(s) 677
BtsCI GGATG 5 cut(s) 38, 637, 990, 1069, 1444
BtsIMutI CAGTG 1 cut(s) 1263
CciI TCATGA 2 cut(s) 1210, 1299
CfoI GCGC 2 cut(s) 387, 947
Cfr13I GGNCC 2 cut(s) 776, 1392
Cfr9I CCCGGG 1 cut(s) 564
CseI GACGC 1 cut(s) 1112
CsiI ACCWGGT 1 cut(s) 781
Csp6I GTAC 2 cut(s) 247, 786
CviAII CATG 7 cut(s) 211, 328, 814, 1141, 1153, 1211, 1300
CviQI GTAC 2 cut(s) 247, 786
DdeI CTNAG 6 cut(s) 52, 399, 672, 1186, 1266, 1290
DpnI GATC 6 cut(s) 89, 191, 263, 669, 978, 1410
DpnII GATC 6 cut(s) 87, 189, 261, 667, 976, 1408
Eam1104I CTCTTC 5 cut(s) 116, 192, 531, 749, 1298
EarI CTCTTC 5 cut(s) 116, 192, 531, 749, 1298
Ecl136II GAGCTC 1 cut(s) 1297
Eco130I CCWWGG 3 cut(s) 302, 327, 813
Eco147I AGGCCT 1 cut(s) 1023
Eco24I GRGCYC 1 cut(s) 1299
Eco47I GGWCC 1 cut(s) 776
Eco53kI GAGCTC 1 cut(s) 1297
Eco57I CTGAAG 1 cut(s) 1425
Eco88I CYCGRG 2 cut(s) 516, 564
Eco91I GGTNACC 1 cut(s) 1270
EcoICRI GAGCTC 1 cut(s) 1297
EcoNI CCTNNNNNAGG 1 cut(s) 786
EcoO65I GGTNACC 1 cut(s) 1270
EcoRI GAATTC 1 cut(s) 604
EcoRII CCWGG 2 cut(s) 781, 959
EcoT14I CCWWGG 3 cut(s) 302, 327, 813
EcoT38I GRGCYC 1 cut(s) 1299
ErhI CCWWGG 3 cut(s) 302, 327, 813
FaeI CATG 7 cut(s) 214, 331, 817, 1144, 1156, 1214, 1303
FalI AAGNNNNNCTT 2 cut(s) 371, 403
FaqI GGGAC 2 cut(s) 491, 596
FatI CATG 7 cut(s) 210, 327, 813, 1140, 1152, 1210, 1299
FauI CCCGC 2 cut(s) 1052, 1166
Fnu4HI GCNGC 5 cut(s) 72, 237, 810, 943, 1057
FokI GGATG 5 cut(s) 25, 624, 997, 1076, 1451
FriOI GRGCYC 1 cut(s) 1299
Fsp4HI GCNGC 5 cut(s) 72, 237, 810, 943, 1057
FspBI CTAG 4 cut(s) 455, 578, 858, 1106
GlaI GCGC 2 cut(s) 386, 946
GluI GCNGC 5 cut(s) 72, 237, 810, 943, 1057
HaeII RGCGCY 1 cut(s) 388
HaeIII GGCC 2 cut(s) 1023, 1394
HapII CCGG 4 cut(s) 565, 974, 1127, 1436
HgaI GACGC 1 cut(s) 1112
HhaI GCGC 2 cut(s) 387, 947
Hin1II CATG 7 cut(s) 214, 331, 817, 1144, 1156, 1214, 1303
Hin6I GCGC 2 cut(s) 385, 945
HinP1I GCGC 2 cut(s) 385, 945
HincII GTYRAC 2 cut(s) 30, 1011
HindII GTYRAC 2 cut(s) 30, 1011
HinfI GANTC 4 cut(s) 491, 569, 1071, 1182
HpaII CCGG 4 cut(s) 565, 974, 1127, 1436
HphI GGTGA 9 cut(s) 154, 265, 340, 350, 382, 413, 934, 1075, 1264
Hpy166II GTNNAC 7 cut(s) 6, 30, 247, 779, 971, 1011, 1083
Hpy188I TCNGA 1 cut(s) 1181
Hpy188III TCNNGA 8 cut(s) 533, 671, 715, 1211, 1300, 1351, 1412, 1436
Hpy8I GTNNAC 7 cut(s) 6, 30, 247, 779, 971, 1011, 1083
Hpy99I CGWCG 1 cut(s) 447
HpyAV CCTTC 3 cut(s) 1241, 1354, 1375
HpyCH4III ACNGT 3 cut(s) 447, 776, 869
HpyCH4V TGCA 8 cut(s) 74, 809, 955, 1115, 1144, 1164, 1236, 1280
HpyF10VI GCNNNNNNNGC 6 cut(s) 68, 126, 798, 815, 1170, 1286
HpyF3I CTNAG 6 cut(s) 52, 399, 672, 1186, 1266, 1290
Hsp92II CATG 7 cut(s) 214, 331, 817, 1144, 1156, 1214, 1303
HspAI GCGC 2 cut(s) 385, 945
Kpn2I TCCGGA 1 cut(s) 1435
Kzo9I GATC 6 cut(s) 87, 189, 261, 667, 976, 1408
LmnI GCTCC 3 cut(s) 98, 634, 1294
Lsp1109I GCAGC 5 cut(s) 58, 223, 821, 929, 1043
LweI GCATC 6 cut(s) 47, 72, 83, 223, 646, 1303
MabI ACCWGGT 1 cut(s) 781
MaeI CTAG 4 cut(s) 455, 578, 858, 1106
MaeIII GTNAC 3 cut(s) 152, 1270, 1321
MalI GATC 6 cut(s) 89, 191, 263, 669, 978, 1410
MbiI CCGCTC 2 cut(s) 93, 129
MboI GATC 6 cut(s) 87, 189, 261, 667, 976, 1408
MboII GAAGA 8 cut(s) 103, 139, 209, 353, 548, 766, 1315, 1418
MflI RGATCY 2 cut(s) 667, 976
MhlI GDGCHC 2 cut(s) 1265, 1299
MluCI AATT 9 cut(s) 288, 374, 604, 646, 871, 878, 1242, 1342, 1444
MlyI GAGTC 2 cut(s) 485, 1191
MroI TCCGGA 1 cut(s) 1435
MseI TTAA 1 cut(s) 678
MslI CAYNNNNRTG 4 cut(s) 326, 485, 629, 1151
MspCI CTTAAG 1 cut(s) 677
MspI CCGG 4 cut(s) 565, 974, 1127, 1436
MspR9I CCNGG 5 cut(s) 565, 566, 783, 961, 1128
Mva1269I GAATGC 2 cut(s) 861, 1206
MvaI CCWGG 2 cut(s) 783, 961
MwoI GCNNNNNNNGC 6 cut(s) 68, 126, 798, 815, 1170, 1286
NciI CCSGG 3 cut(s) 565, 566, 1128
NcoI CCATGG 2 cut(s) 327, 813
NdeII GATC 6 cut(s) 87, 189, 261, 667, 976, 1408
NlaIII CATG 7 cut(s) 214, 331, 817, 1144, 1156, 1214, 1303
NlaIV GGNNCC 4 cut(s) 622, 669, 978, 1393
NmeAIII GCCGAG 2 cut(s) 1182, 1420
NmuCI GTSAC 2 cut(s) 152, 1270
NspI RCATGY 2 cut(s) 1144, 1156
PaeR7I CTCGAG 1 cut(s) 516
PagI TCATGA 2 cut(s) 1210, 1299
PceI AGGCCT 1 cut(s) 1023
PciI ACATGT 1 cut(s) 1152
PctI GAATGC 2 cut(s) 861, 1206
PfeI GAWTC 2 cut(s) 569, 1071
PkrI GCNGC 5 cut(s) 73, 238, 811, 944, 1058
PleI GAGTC 2 cut(s) 485, 1190
PpsI GAGTC 2 cut(s) 485, 1190
PscI ACATGT 1 cut(s) 1152
Psp124BI GAGCTC 1 cut(s) 1299
Psp6I CCWGG 2 cut(s) 781, 959
PspEI GGTNACC 1 cut(s) 1270
PspGI CCWGG 2 cut(s) 781, 959
PspN4I GGNNCC 4 cut(s) 622, 669, 978, 1393
PspPI GGNCC 2 cut(s) 776, 1392
PspXI VCTCGAGB 1 cut(s) 516
PstI CTGCAG 2 cut(s) 1238, 1282
PsuI RGATCY 2 cut(s) 667, 976
RsaI GTAC 2 cut(s) 248, 787
RsaNI GTAC 2 cut(s) 247, 786
RseI CAYNNNNRTG 4 cut(s) 326, 485, 629, 1151
SacI GAGCTC 1 cut(s) 1299
SaqAI TTAA 1 cut(s) 678
SatI GCNGC 5 cut(s) 72, 237, 810, 943, 1057
Sau3AI GATC 6 cut(s) 87, 189, 261, 667, 976, 1408
Sau96I GGNCC 2 cut(s) 776, 1392
SchI GAGTC 2 cut(s) 485, 1191
ScrFI CCNGG 5 cut(s) 565, 566, 783, 961, 1128
SduI GDGCHC 2 cut(s) 1265, 1299
SexAI ACCWGGT 1 cut(s) 781
SfaNI GCATC 6 cut(s) 47, 72, 83, 223, 646, 1303
SfcI CTRYAG 2 cut(s) 1234, 1278
Sfr274I CTCGAG 1 cut(s) 516
SinI GGWCC 1 cut(s) 776
SlaI CTCGAG 1 cut(s) 516
SmaI CCCGGG 1 cut(s) 566
SmiMI CAYNNNNRTG 4 cut(s) 326, 485, 629, 1151
SmlI CTYRAG 4 cut(s) 516, 677, 827, 1349
SmoI CTYRAG 4 cut(s) 516, 677, 827, 1349
Sse9I AATT 9 cut(s) 288, 374, 604, 646, 871, 878, 1242, 1342, 1444
SseBI AGGCCT 1 cut(s) 1023
SsiI CCGC 6 cut(s) 91, 127, 239, 612, 1059, 1173
SspMI CTAG 4 cut(s) 455, 578, 858, 1106
SstI GAGCTC 1 cut(s) 1299
StuI AGGCCT 1 cut(s) 1023
StyD4I CCNGG 5 cut(s) 563, 564, 781, 959, 1126
StyI CCWWGG 3 cut(s) 302, 327, 813
TaaI ACNGT 3 cut(s) 447, 776, 869
TaqI TCGA 4 cut(s) 372, 517, 797, 1132
TaqII GACCGA 1 cut(s) 140
TasI AATT 9 cut(s) 288, 374, 604, 646, 871, 878, 1242, 1342, 1444
TfiI GAWTC 2 cut(s) 569, 1071
Tru1I TTAA 1 cut(s) 678
Tru9I TTAA 1 cut(s) 678
TscAI CASTG 1 cut(s) 1270
TseFI GTSAC 2 cut(s) 152, 1270
TseI GCWGC 5 cut(s) 71, 236, 809, 942, 1056
Tsp45I GTSAC 2 cut(s) 152, 1270
TspDTI ATGAA 5 cut(s) 1024, 1199, 1227, 1316, 1394
TspGWI ACGGA 1 cut(s) 997
TspMI CCCGGG 1 cut(s) 564
TspRI CASTG 1 cut(s) 1270
Vha464I CTTAAG 1 cut(s) 677
VpaK11BI GGWCC 1 cut(s) 776
XagI CCTNNNNNAGG 1 cut(s) 786
XapI RAATTY 1 cut(s) 604
XceI RCATGY 2 cut(s) 1144, 1156
XhoI CTCGAG 1 cut(s) 516
XmaI CCCGGG 1 cut(s) 564
XspI CTAG 4 cut(s) 455, 578, 858, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.