Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000471

Physical Location & Seq

Genomic Coordinates Reverse (-)

12569884 .. 12571869

Gene Structure 1986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47534

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGTTTGCTTCCAATCCCACAGCTATGCCCACCACAGCCTCGACTATGTTCTCGGCCTACGCCTCATTTGCTGCCTCAATGATGCTGGTCCGTTCCATAACGGACCAGCTCATCCCAGGGCTGCTCCGAACCTACATTTCCTCATCCCTCAGGCACCTATTCACCCCTCTCTCCACCACCTTGACTGTCGTCATCGAAGAGTACGATGGCATCATCGCCCGGAATGAAGTCTTTGACGCGGCGGAGCTCTATCTCCGGGCCAAGATCAGTCCTCTCACAGAACGTCTCAGGGTCAGCAAAACTCCTAAGCAAAAGGCCATCAGCTCCGCCATTGATAAAAACCAAGAGCTAGTGGACACATTCGAGAACATGAAGCTCAAGTGGAAATTTGTGTGTGTAGAGCCCAAAAATGGTGGACATTACTCTTATGATAAGCGTCACTACGACCTGAGCTTCCACAGAAAGCACAAGGAGAAAGTGATGGAGTGTTACTTGCCATATGTGTTAGCTAAGGCCAAGGCCATTAAGGAAGAGGAGCAATTTTTGAAGCTCTTCACCCTCGACCGCGATGAGAACTCTCGCGGTTCGGGGTTGTGGAAGTCCATTAATCTGGAGCACCCCTCCACCTTTGACACAGTGGCGATGGAGCCGGAGATGAAGAAGAGGATTATTGAAGATTTGGACAGGTTTGTGAGGAGGAAAGAGTTTTACAAGAAGGTGGGGAAGGCTTGGAAGAGGGGCTACTTGCTTTATGGTCCTCCGGGGACCGGGAAATCGAGCTTGATTGCGGCAATGGCGAACTATTTGAATTTTAGTATCTATGATTTGGAGCTGAGCAGCATTTCCAGCAACACTGAGTTGAGGAAGGCCTTGCTGTCTACGTCGAATCGGTCTATATTGGTGATAGAGGATATTGATTGCTCTGTGGAAATCCAAAACAGAGAGGCAGAGGAGGGTGCTTTTCAGAGTAATAAGTCCAAAAAGATGTTGACGCTTTCGGGGTTGTTGAACTTTATTGATGGTTTGTGGTCGAGTTGTGGTGATGAGAGGATCATAGTGTTCACAACAAACCATAAGGATCGGCTTGACCCGGCATTGCTGCGTCCAGGGCGAATGGACATGCACATTAACATGTCCTATTGCACTGCAGGGGGTTTTAACACACTTGCTTCGAACTATCTTGGCATTCATCGCAGCAACCGTCACAGGCTTTGTGGCGAAATTGAAGGACTAATTGAAAGCAGTGAGGTCACTCCTGCAGAGGTTGCTGAGGAGCTAATGAGGATCGATGATGCTGATGTTGCTCTTGAAGGACTAGTGAGCTTGCTCAAGAGAAAAAAAGTTGAGAGAAATGAAGCAAAGGAGGAGGCGAGTAACAAAATTGAGATTCAATATGTAAAGAGGCAGAAAACCGAGCCAAATGTTAATGGTGACAATCAAAACATGTTGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

484

Amino Acids

55.01

Weight (kDa)

8.3

Isoelectric Point (pI)

53.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	38 - 132	2.2e-24	Domain associated at C-terminal with AAA
AAA	PF00004	248 - 379	7.8e-21	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	381 - 454	1.3e-19	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18190 AT2G18193
fragaria_vesca	FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica	MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica	Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis	pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis	RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata	RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora	Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii	Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa	Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha	Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana	Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	153
AccI	GTMKAC	1 cut(s)	878
AccII	CGCG	3 cut(s)	239, 567, 582
AciI	CCGC	6 cut(s)	239, 242, 327, 565, 582, 788
AclWI	GGATC	3 cut(s)	1058, 1086, 1292
AcsI	RAATTY	2 cut(s)	386, 808
AfaI	GTAC	1 cut(s)	203
AfiI	CCNNNNNNNGG	2 cut(s)	410, 767
AflIII	ACRYGT	2 cut(s)	1131, 1443
AgsI	TTSAA	8 cut(s)	547, 674, 808, 1009, 1226, 1238, 1310, 1391
AhlI	ACTAGT	1 cut(s)	1315
AjnI	CCWGG	2 cut(s)	115, 1105
Alw21I	GWGCWC	2 cut(s)	249, 618
Alw26I	GTCTC	1 cut(s)	290
AlwI	GGATC	3 cut(s)	1058, 1086, 1292
AoxI	GGCC	6 cut(s)	54, 258, 315, 513, 519, 867
ApeKI	GCWGC	5 cut(s)	71, 121, 837, 1099, 1194
ApoI	RAATTY	2 cut(s)	386, 808
AseI	ATTAAT	1 cut(s)	606
Asp700I	GAANNNNTTC	1 cut(s)	551
AspS9I	GGNCC	5 cut(s)	88, 103, 258, 755, 765
AsuC2I	CCSGG	5 cut(s)	220, 257, 762, 769, 1091
AsuHPI	GGTGA	5 cut(s)	154, 547, 913, 1052, 1442
AsuII	TTCGAA	1 cut(s)	1172
AvaII	GGWCC	4 cut(s)	88, 103, 755, 765
AxyI	CCTNAGG	1 cut(s)	149
BanI	GGYRCC	1 cut(s)	153
BanII	GRGCYC	2 cut(s)	249, 405
BarI	GAAGNNNNNNTAC	2 cut(s)	725, 757
Bbv12I	GWGCWC	2 cut(s)	249, 618
BbvCI	CCTCAGC	1 cut(s)	1269
BbvI	GCAGC	5 cut(s)	58, 108, 849, 1086, 1206
BccI	CCATC	5 cut(s)	200, 326, 475, 637, 1013
BciT130I	CCWGG	2 cut(s)	117, 1107
BcnI	CCSGG	5 cut(s)	220, 257, 762, 769, 1091
BcoDI	GTCTC	1 cut(s)	290
BcuI	ACTAGT	1 cut(s)	1315
BfaI	CTAG	2 cut(s)	350, 1316
BfmI	CTRYAG	2 cut(s)	1146, 1257
BisI	GCNGC	7 cut(s)	72, 122, 240, 789, 838, 1100, 1195
BlpI	GCTNAGC	1 cut(s)	833
BlsI	GCNGC	7 cut(s)	73, 123, 241, 790, 839, 1101, 1196
Bme1390I	CCNGG	7 cut(s)	117, 220, 257, 762, 769, 1091, 1107
Bme18I	GGWCC	4 cut(s)	88, 103, 755, 765
BmgT120I	GGNCC	5 cut(s)	88, 103, 258, 755, 765
BmiI	GGNNCC	3 cut(s)	155, 648, 766
BmrFI	CCNGG	7 cut(s)	117, 220, 257, 762, 769, 1091, 1107
BmsI	GCATC	3 cut(s)	72, 219, 1282
BoxI	GACNNNNGTC	1 cut(s)	188
BplI	GAGNNNNNCTC	2 cut(s)	605, 637
BpmI	CTGGAG	1 cut(s)	632
Bpu10I	CCTNAGC	4 cut(s)	306, 449, 510, 1269
Bpu1102I	GCTNAGC	1 cut(s)	833
Bpu14I	TTCGAA	1 cut(s)	1172
BpuEI	CTTGAG	2 cut(s)	362, 1313
BpuMI	CCSGG	5 cut(s)	220, 257, 762, 769, 1091
Bsa29I	ATCGAT	1 cut(s)	1287
BsaJI	CCNNGG	5 cut(s)	115, 116, 516, 761, 1106
Bsc4I	CCNNNNNNNGG	2 cut(s)	410, 767
Bse21I	CCTNAGG	1 cut(s)	149
Bse3DI	GCAATG	2 cut(s)	798, 1094
BseBI	CCWGG	2 cut(s)	117, 1107
BseCI	ATCGAT	1 cut(s)	1287
BseDI	CCNNGG	5 cut(s)	115, 116, 516, 761, 1106
BseGI	GGATG	2 cut(s)	111, 143
BseLI	CCNNNNNNNGG	2 cut(s)	410, 767
BseMI	GCAATG	2 cut(s)	798, 1094
BseMII	CTCAG	6 cut(s)	163, 301, 440, 824, 846, 1260
BseRI	GAGGAG	5 cut(s)	548, 709, 965, 1286, 1379
BseXI	GCAGC	5 cut(s)	58, 108, 849, 1086, 1206
Bsh1236I	CGCG	3 cut(s)	239, 567, 582
Bsh1285I	CGRYCG	1 cut(s)	565
BshFI	GGCC	6 cut(s)	56, 260, 317, 515, 521, 869
BshNI	GGYRCC	1 cut(s)	153
BshVI	ATCGAT	1 cut(s)	1287
BsiEI	CGRYCG	1 cut(s)	565
BsiHKAI	GWGCWC	2 cut(s)	249, 618
BsiSI	CCGG	6 cut(s)	220, 256, 650, 761, 768, 1091
BslFI	GGGAC	1 cut(s)	778
BslI	CCNNNNNNNGG	2 cut(s)	410, 767
BsmAI	GTCTC	1 cut(s)	290
BsmBI	CGTCTC	1 cut(s)	290
BsmFI	GGGAC	1 cut(s)	778
BsmI	GAATGC	1 cut(s)	1185
BsnI	GGCC	6 cut(s)	56, 260, 317, 515, 521, 869
Bsp119I	TTCGAA	1 cut(s)	1172
Bsp1286I	GDGCHC	3 cut(s)	249, 405, 618
Bsp143I	GATC	4 cut(s)	264, 1050, 1078, 1284
Bsp1720I	GCTNAGC	1 cut(s)	833
BspACI	CCGC	6 cut(s)	239, 242, 327, 565, 582, 788
BspANI	GGCC	6 cut(s)	56, 260, 317, 515, 521, 869
BspCNI	CTCAG	6 cut(s)	162, 300, 441, 825, 847, 1261
BspDI	ATCGAT	1 cut(s)	1287
BspFNI	CGCG	3 cut(s)	239, 567, 582
BspLI	GGNNCC	3 cut(s)	155, 648, 766
BspMAI	CTGCAG	2 cut(s)	1150, 1261
BspPI	GGATC	3 cut(s)	1058, 1086, 1292
BspQI	GCTCTTC	1 cut(s)	557
BspT104I	TTCGAA	1 cut(s)	1172
BspT107I	GGYRCC	1 cut(s)	153
BsrDI	GCAATG	2 cut(s)	798, 1094
BssECI	CCNNGG	5 cut(s)	115, 116, 516, 761, 1106
BssMI	GATC	4 cut(s)	264, 1050, 1078, 1284
BssT1I	CCWWGG	1 cut(s)	516
Bst2UI	CCWGG	2 cut(s)	117, 1107
Bst4CI	ACNGT	3 cut(s)	187, 637, 1202
Bst6I	CTCTTC	5 cut(s)	192, 525, 557, 656, 728
BstAPI	GCANNNNNTGC	1 cut(s)	1265
BstBI	TTCGAA	1 cut(s)	1172
BstC8I	GCNNGC	1 cut(s)	1325
BstDEI	CTNAG	8 cut(s)	149, 287, 306, 449, 510, 833, 855, 1269
BstF5I	GGATG	2 cut(s)	111, 143
BstFNI	CGCG	3 cut(s)	239, 567, 582
BstKTI	GATC	4 cut(s)	267, 1053, 1081, 1287
BstMAI	GTCTC	1 cut(s)	290
BstMBI	GATC	4 cut(s)	264, 1050, 1078, 1284
BstMCI	CGRYCG	1 cut(s)	565
BstMWI	GCNNNNNNNGC	7 cut(s)	68, 794, 846, 1108, 1191, 1265, 1301
BstNI	CCWGG	2 cut(s)	117, 1107
BstNSI	RCATGY	3 cut(s)	1123, 1135, 1447
BstPAI	GACNNNNGTC	1 cut(s)	188
BstSCI	CCNGG	7 cut(s)	115, 218, 255, 760, 767, 1089, 1105
BstSFI	CTRYAG	2 cut(s)	1146, 1257
BstUI	CGCG	3 cut(s)	239, 567, 582
BstV1I	GCAGC	5 cut(s)	58, 108, 849, 1086, 1206
BstXI	CCANNNNNNTGG	1 cut(s)	610
Bsu15I	ATCGAT	1 cut(s)	1287
Bsu36I	CCTNAGG	1 cut(s)	149
BsuRI	GGCC	6 cut(s)	56, 260, 317, 515, 521, 869
BsuTUI	ATCGAT	1 cut(s)	1287
BtgZI	GCGATG	4 cut(s)	199, 582, 656, 1175
BtsCI	GGATG	2 cut(s)	111, 143
BtsI	GCAGTG	2 cut(s)	1143, 1249
BtsIMutI	CAGTG	4 cut(s)	642, 852, 1143, 1249
Cac8I	GCNNGC	1 cut(s)	1325
Cfr13I	GGNCC	5 cut(s)	88, 103, 258, 755, 765
ClaI	ATCGAT	1 cut(s)	1287
CseI	GACGC	4 cut(s)	245, 425, 1000, 1091
Csp6I	GTAC	1 cut(s)	202
CspCI	CAANNNNNGTGG	2 cut(s)	394, 429
CviAII	CATG	4 cut(s)	370, 1120, 1132, 1444
CviQI	GTAC	1 cut(s)	202
DdeI	CTNAG	8 cut(s)	149, 287, 306, 449, 510, 833, 855, 1269
DpnI	GATC	4 cut(s)	266, 1052, 1080, 1286
DpnII	GATC	4 cut(s)	264, 1050, 1078, 1284
Eam1104I	CTCTTC	5 cut(s)	192, 525, 557, 656, 728
EarI	CTCTTC	5 cut(s)	192, 525, 557, 656, 728
EciI	GGCGGA	2 cut(s)	257, 316
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	1 cut(s)	516
Eco147I	AGGCCT	1 cut(s)	869
Eco24I	GRGCYC	2 cut(s)	249, 405
Eco47I	GGWCC	4 cut(s)	88, 103, 755, 765
Eco53kI	GAGCTC	1 cut(s)	247
Eco81I	CCTNAGG	1 cut(s)	149
EcoICRI	GAGCTC	1 cut(s)	247
EcoRII	CCWGG	2 cut(s)	115, 1105
EcoT14I	CCWWGG	1 cut(s)	516
EcoT38I	GRGCYC	2 cut(s)	249, 405
ErhI	CCWWGG	1 cut(s)	516
Esp3I	CGTCTC	1 cut(s)	290
FaeI	CATG	4 cut(s)	373, 1123, 1135, 1447
FaqI	GGGAC	1 cut(s)	778
FatI	CATG	4 cut(s)	369, 1119, 1131, 1443
FauNDI	CATATG	1 cut(s)	499
FblI	GTMKAC	1 cut(s)	878
Fnu4HI	GCNGC	7 cut(s)	72, 122, 240, 789, 838, 1100, 1195
FokI	GGATG	2 cut(s)	98, 130
FriOI	GRGCYC	2 cut(s)	249, 405
Fsp4HI	GCNGC	7 cut(s)	72, 122, 240, 789, 838, 1100, 1195
FspBI	CTAG	2 cut(s)	350, 1316
GluI	GCNGC	7 cut(s)	72, 122, 240, 789, 838, 1100, 1195
GsuI	CTGGAG	1 cut(s)	632
HaeIII	GGCC	6 cut(s)	56, 260, 317, 515, 521, 869
HapII	CCGG	6 cut(s)	220, 256, 650, 761, 768, 1091
HgaI	GACGC	4 cut(s)	245, 425, 1000, 1091
Hin1II	CATG	4 cut(s)	373, 1123, 1135, 1447
HincII	GTYRAC	1 cut(s)	990
HindII	GTYRAC	1 cut(s)	990
HinfI	GANTC	2 cut(s)	886, 1387
HpaII	CCGG	6 cut(s)	220, 256, 650, 761, 768, 1091
HphI	GGTGA	5 cut(s)	154, 547, 913, 1052, 1442
Hpy166II	GTNNAC	5 cut(s)	355, 416, 879, 990, 1062
Hpy188I	TCNGA	2 cut(s)	128, 966
Hpy188III	TCNNGA	4 cut(s)	364, 611, 1307, 1330
Hpy8I	GTNNAC	5 cut(s)	355, 416, 879, 990, 1062
Hpy99I	CGWCG	1 cut(s)	886
HpyAV	CCTTC	5 cut(s)	709, 718, 859, 1220, 1304
HpyCH4III	ACNGT	3 cut(s)	187, 637, 1202
HpyCH4IV	ACGT	2 cut(s)	283, 881
HpyCH4V	TGCA	4 cut(s)	1123, 1143, 1148, 1259
HpyF10VI	GCNNNNNNNGC	7 cut(s)	68, 794, 846, 1108, 1191, 1265, 1301
HpyF3I	CTNAG	8 cut(s)	149, 287, 306, 449, 510, 833, 855, 1269
HpySE526I	ACGT	2 cut(s)	283, 881
Hsp92II	CATG	4 cut(s)	373, 1123, 1135, 1447
Kzo9I	GATC	4 cut(s)	264, 1050, 1078, 1284
LguI	GCTCTTC	1 cut(s)	557
LmnI	GCTCC	8 cut(s)	129, 244, 329, 535, 613, 646, 829, 1273
Lsp1109I	GCAGC	5 cut(s)	58, 108, 849, 1086, 1206
LweI	GCATC	3 cut(s)	72, 219, 1282
MaeI	CTAG	2 cut(s)	350, 1316
MaeII	ACGT	2 cut(s)	283, 881
MaeIII	GTNAC	6 cut(s)	437, 488, 1202, 1249, 1373, 1430
MalI	GATC	4 cut(s)	266, 1052, 1080, 1286
MboI	GATC	4 cut(s)	264, 1050, 1078, 1284
MboII	GAAGA	7 cut(s)	209, 542, 544, 670, 673, 686, 745
MhlI	GDGCHC	3 cut(s)	249, 405, 618
MluCI	AATT	6 cut(s)	386, 539, 808, 1221, 1233, 1380
MroXI	GAANNNNTTC	1 cut(s)	551
MseI	TTAA	5 cut(s)	525, 606, 1128, 1158, 1425
MslI	CAYNNNNRTG	2 cut(s)	23, 1130
MspI	CCGG	6 cut(s)	220, 256, 650, 761, 768, 1091
MspR9I	CCNGG	7 cut(s)	117, 220, 257, 762, 769, 1091, 1107
Mva1269I	GAATGC	1 cut(s)	1185
MvaI	CCWGG	2 cut(s)	117, 1107
MvnI	CGCG	3 cut(s)	239, 567, 582
MwoI	GCNNNNNNNGC	7 cut(s)	68, 794, 846, 1108, 1191, 1265, 1301
NciI	CCSGG	5 cut(s)	220, 257, 762, 769, 1091
NdeI	CATATG	1 cut(s)	499
NdeII	GATC	4 cut(s)	264, 1050, 1078, 1284
NlaIII	CATG	4 cut(s)	373, 1123, 1135, 1447
NlaIV	GGNNCC	3 cut(s)	155, 648, 766
NmeAIII	GCCGAG	1 cut(s)	32
NmuCI	GTSAC	4 cut(s)	437, 1202, 1249, 1430
NspI	RCATGY	3 cut(s)	1123, 1135, 1447
NspV	TTCGAA	1 cut(s)	1172
PasI	CCCWGGG	1 cut(s)	116
PceI	AGGCCT	1 cut(s)	869
PciI	ACATGT	2 cut(s)	1131, 1443
PciSI	GCTCTTC	1 cut(s)	557
PcsI	WCGNNNNNNNCGW	2 cut(s)	201, 1198
PctI	GAATGC	1 cut(s)	1185
PdmI	GAANNNNTTC	1 cut(s)	551
PfeI	GAWTC	2 cut(s)	886, 1387
PkrI	GCNGC	7 cut(s)	73, 123, 241, 790, 839, 1101, 1196
PscI	ACATGT	2 cut(s)	1131, 1443
PshAI	GACNNNNGTC	1 cut(s)	188
PshBI	ATTAAT	1 cut(s)	606
Psp124BI	GAGCTC	1 cut(s)	249
Psp6I	CCWGG	2 cut(s)	115, 1105
PspGI	CCWGG	2 cut(s)	115, 1105
PspN4I	GGNNCC	3 cut(s)	155, 648, 766
PspPI	GGNCC	5 cut(s)	88, 103, 258, 755, 765
PstI	CTGCAG	2 cut(s)	1150, 1261
RsaI	GTAC	1 cut(s)	203
RsaNI	GTAC	1 cut(s)	202
RseI	CAYNNNNRTG	2 cut(s)	23, 1130
SacI	GAGCTC	1 cut(s)	249
SapI	GCTCTTC	1 cut(s)	557
SaqAI	TTAA	5 cut(s)	525, 606, 1128, 1158, 1425
SatI	GCNGC	7 cut(s)	72, 122, 240, 789, 838, 1100, 1195
Sau3AI	GATC	4 cut(s)	264, 1050, 1078, 1284
Sau96I	GGNCC	5 cut(s)	88, 103, 258, 755, 765
ScrFI	CCNGG	7 cut(s)	117, 220, 257, 762, 769, 1091, 1107
SduI	GDGCHC	3 cut(s)	249, 405, 618
SfaNI	GCATC	3 cut(s)	72, 219, 1282
SfcI	CTRYAG	2 cut(s)	1146, 1257
SfuI	TTCGAA	1 cut(s)	1172
SinI	GGWCC	4 cut(s)	88, 103, 755, 765
SmiMI	CAYNNNNRTG	2 cut(s)	23, 1130
SmlI	CTYRAG	2 cut(s)	377, 1328
SmoI	CTYRAG	2 cut(s)	377, 1328
SpeI	ACTAGT	1 cut(s)	1315
Sse9I	AATT	6 cut(s)	386, 539, 808, 1221, 1233, 1380
SseBI	AGGCCT	1 cut(s)	869
SsiI	CCGC	6 cut(s)	239, 242, 327, 565, 582, 788
SspMI	CTAG	2 cut(s)	350, 1316
SstI	GAGCTC	1 cut(s)	249
StuI	AGGCCT	1 cut(s)	869
StyD4I	CCNGG	7 cut(s)	115, 218, 255, 760, 767, 1089, 1105
StyI	CCWWGG	1 cut(s)	516
TaaI	ACNGT	3 cut(s)	187, 637, 1202
TaiI	ACGT	2 cut(s)	286, 884
TaqI	TCGA	9 cut(s)	41, 195, 363, 561, 776, 884, 1031, 1172, 1287
TaqII	GACCGA	1 cut(s)	879
TasI	AATT	6 cut(s)	386, 539, 808, 1221, 1233, 1380
TauI	GCSGC	2 cut(s)	242, 791
TfiI	GAWTC	2 cut(s)	886, 1387
Tru1I	TTAA	5 cut(s)	525, 606, 1128, 1158, 1425
Tru9I	TTAA	5 cut(s)	525, 606, 1128, 1158, 1425
TscAI	CASTG	4 cut(s)	642, 859, 1150, 1249
TseFI	GTSAC	4 cut(s)	437, 1202, 1249, 1430
TseI	GCWGC	5 cut(s)	71, 121, 837, 1099, 1194
Tsp45I	GTSAC	4 cut(s)	437, 1202, 1249, 1430
TspDTI	ATGAA	5 cut(s)	240, 386, 671, 1178, 1368
TspGWI	ACGGA	2 cut(s)	80, 116
TspRI	CASTG	4 cut(s)	642, 859, 1150, 1249
VpaK11BI	GGWCC	4 cut(s)	88, 103, 755, 765
VspI	ATTAAT	1 cut(s)	606
XapI	RAATTY	2 cut(s)	386, 808
XceI	RCATGY	3 cut(s)	1123, 1135, 1447
XmiI	GTMKAC	1 cut(s)	878
XmnI	GAANNNNTTC	1 cut(s)	551
XspI	CTAG	2 cut(s)	350, 1316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.