RchiOBHm_Chr2g0100651

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000471
Physical Location & Seq
Forward (+)
12544560 .. 12546138
1579 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47528

Sequence Viewer

Length: 1494 bp
ATGTTTCCACTCAATTTTGAGAGTCTCAATCTCACAAACATGCCCACAACGGCATCGTCCTTGTTCTCAGCCTATGCCTCCCTCACCGCATTCATAATGTTGGTCCGTTCCATAGTTGATCAGCTGATCCCCCACGAGCTCCGCTACTACATCTACTCGGCCTTCGGCCGCCTCTTCACCCCTCGCCCCTCCGACCTCACTCTCATCGTCGATGAGTGCTGCGGCATGGTTCAAAACCAAATCTATGAGGCGGCGGAGGTCTACCTCCGGACCAAGGTCAGTCCCCTAAACGACCGTCTCCGGGTGAAAAAGGCACCTCGGCAGAAGAACATTACCGTCACGATTGAAAAGGGTGAAGAAATCAAAGACAGTTTCGACGGGATAAACATCAACTGGCGTTTTGTGTGCAGCGGAGGAGAGAATGAGCAGAATAGCCATGCGCAACAGAAGCGTCAGTTTGAGCTGACAGTGAATAAGAAACATCGAGTCAAAGTAATCGAGTCCTACTTGCCGTATGTGCTTGACAGGGCCGAGGCCATTAAGAATGAGGACAAGGTTGTGAAGCTCTATAGCCAAGAGGGGTCTTATGATCCGTATGATGATGAATCCAATTCGGACTGGAGTTCGATAAATCTGGATCATCCGGCTACCTTGGAGACACTTGCCGTGGATGCCGAGGTTAAGAGAACGATCATTGAGGATTTGGATAGGTTTTTGAGGAGGAGAGAGTTTTATAAGAAGGTTGGGAAGGCCTGGAAAAGAGGGTACCTGTTGTATGGTCCACCCGGGACTGGCAAATCCAGCTTGATTGCTGCCATGGCTAATTATCTCAAGTTTGATATATATGATGTGGAGCTTACTAGTATTAAAGACAACTCGGAGTTGAGGAGGACACTGCTGACTACGACAAACCGTTCTATCTTGGTCATTGAGGATATTGATTGCAGTGTGGAGGTGCAAAACCGGGAATGTGAGGTGGAAGATCATCAACCATCTAACACCAAGTTAACACTCTCCGGCCTACTGAACTTTATAGATGGTTTGTGGTCAAGCTGCGGAGATGAGAGAATCATTGTGTTCACCACCAACCACAAGCACAAGATAGACCCGGCATTGTTGCGTCCTGGTCGAATGGATGTGCACATTCACATGTCATATTGCACTCCAAGCGGGTTCAGGATCTTGGCCTCTAACTACCTTGGTATGCATGAAAGCAATCCTCATCGCCTATGCGGAGAAGTTGAGGAGTTAATCGAGAGCTCAAAGGTCACCCCCGCGGAGATTGCTGAGCAGCTCATGAAGAGTGAGGATGCTGATGTTGCTCTTGAACGACTTGTCGATTTCCTGAAAAGAAAGAAGGAAGAGAGCAATAAAATTGGGGATGAAGGGACTAGTAAATCCGAAATTCAAGAAACAGATCAAAACGCAGAAAAGTGGAGCTCAGTCAGTAGCGATGATGAACTTAAATCTTCTCTTTCAGATGCTCAAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

497

Amino Acids

56.65

Weight (kDa)

5.32

Isoelectric Point (pI)

50.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 43 - 136 5.4e-25 Domain associated at C-terminal with AAA
AAA PF00004 256 - 385 3.2e-20 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 387 - 457 7.1e-22 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18190 AT2G18193
fragaria_vesca FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 735
Acc16I TGCGCA 1 cut(s) 441
Acc65I GGTACC 1 cut(s) 765
AccB1I GGYRCC 2 cut(s) 313, 765
AccI GTMKAC 1 cut(s) 261
AccII CGCG 1 cut(s) 1277
AccIII TCCGGA 1 cut(s) 267
AclWI GGATC 4 cut(s) 121, 584, 645, 1187
AcoI YGGCCR 1 cut(s) 166
AcsI RAATTY 1 cut(s) 1404
AfaI GTAC 1 cut(s) 767
AfiI CCNNNNNNNGG 3 cut(s) 274, 301, 791
AflIII ACRYGT 1 cut(s) 1149
AgsI TTSAA 4 cut(s) 233, 347, 1328, 1409
AhlI ACTAGT 2 cut(s) 860, 1391
AjnI CCWGG 2 cut(s) 752, 1123
Alw21I GWGCWC 4 cut(s) 141, 1143, 1262, 1442
Alw26I GTCTC 3 cut(s) 29, 302, 650
Alw44I GTGCAC 1 cut(s) 1139
AlwI GGATC 4 cut(s) 121, 584, 645, 1187
Ama87I CYCGRG 1 cut(s) 785
Aor13HI TCCGGA 1 cut(s) 267
AoxI GGCC 7 cut(s) 159, 166, 528, 534, 750, 1018, 1185
ApaLI GTGCAC 1 cut(s) 1139
ApeKI GCWGC 5 cut(s) 219, 408, 812, 1053, 1291
ApoI RAATTY 1 cut(s) 1404
Asp718I GGTACC 1 cut(s) 765
AspLEI GCGC 1 cut(s) 442
AspS9I GGNCC 4 cut(s) 103, 270, 528, 779
AsuC2I CCSGG 5 cut(s) 302, 786, 787, 965, 1109
AsuHPI GGTGA 6 cut(s) 76, 169, 316, 365, 1072, 1261
AvaI CYCGRG 1 cut(s) 785
AvaII GGWCC 3 cut(s) 103, 270, 779
BaeGI GKGCMC 1 cut(s) 1143
BanI GGYRCC 2 cut(s) 313, 765
BanII GRGCYC 3 cut(s) 141, 1262, 1442
BauI CACGAG 1 cut(s) 134
Bbv12I GWGCWC 4 cut(s) 141, 1143, 1262, 1442
BbvI GCAGC 5 cut(s) 206, 420, 799, 1040, 1303
BccI CCATC 2 cut(s) 1000, 1031
BceAI ACGGC 3 cut(s) 66, 496, 650
BciT130I CCWGG 2 cut(s) 754, 1125
BclI TGATCA 1 cut(s) 118
BcnI CCSGG 5 cut(s) 302, 786, 787, 965, 1109
BcoDI GTCTC 3 cut(s) 29, 302, 650
BcuI ACTAGT 2 cut(s) 860, 1391
BfaI CTAG 2 cut(s) 861, 1392
BfmI CTRYAG 1 cut(s) 568
BisI GCNGC 8 cut(s) 169, 220, 223, 252, 409, 813, 1054, 1292
BlpI GCTNAGC 1 cut(s) 1287
BlsI GCNGC 8 cut(s) 170, 221, 224, 253, 410, 814, 1055, 1293
Bme1390I CCNGG 7 cut(s) 302, 754, 786, 787, 965, 1109, 1125
Bme18I GGWCC 3 cut(s) 103, 270, 779
BmeT110I CYCGRG 1 cut(s) 785
BmgT120I GGNCC 4 cut(s) 103, 270, 528, 779
BmiI GGNNCC 2 cut(s) 315, 767
BmrFI CCNGG 7 cut(s) 302, 754, 786, 787, 965, 1109, 1125
BmsI GCATC 4 cut(s) 62, 661, 1300, 1471
BoxI GACNNNNGTC 1 cut(s) 275
BpmI CTGGAG 1 cut(s) 640
Bpu1102I GCTNAGC 1 cut(s) 1287
BpuEI CTTGAG 2 cut(s) 815, 1470
BpuMI CCSGG 5 cut(s) 302, 786, 787, 965, 1109
BsaBI GATNNNNATC 1 cut(s) 386
BsaWI WCCGGW 1 cut(s) 267
Bsc4I CCNNNNNNNGG 3 cut(s) 274, 301, 791
Bse1I ACTGG 3 cut(s) 398, 623, 796
Bse8I GATNNNNATC 1 cut(s) 386
BseAI TCCGGA 1 cut(s) 267
BseBI CCWGG 2 cut(s) 754, 1125
BseGI GGATG 5 cut(s) 640, 676, 1141, 1315, 1387
BseJI GATNNNNATC 1 cut(s) 386
BseLI CCNNNNNNNGG 3 cut(s) 274, 301, 791
BseMII CTCAG 3 cut(s) 81, 1278, 1455
BseNI ACTGG 3 cut(s) 398, 623, 796
BseRI GAGGAG 5 cut(s) 429, 733, 736, 901, 1259
BseSI GKGCMC 1 cut(s) 1143
BseX3I CGGCCG 1 cut(s) 166
BseXI GCAGC 5 cut(s) 206, 420, 799, 1040, 1303
BsgI GTGCAG 1 cut(s) 427
Bsh1236I CGCG 1 cut(s) 1277
Bsh1285I CGRYCG 2 cut(s) 169, 295
BshFI GGCC 7 cut(s) 161, 168, 530, 536, 752, 1020, 1187
BshNI GGYRCC 2 cut(s) 313, 765
BsiEI CGRYCG 2 cut(s) 169, 295
BsiHKAI GWGCWC 4 cut(s) 141, 1143, 1262, 1442
BsiHKCI CYCGRG 1 cut(s) 785
BsiSI CCGG 7 cut(s) 268, 301, 644, 786, 964, 1017, 1109
BslFI GGGAC 3 cut(s) 267, 802, 1402
BslI CCNNNNNNNGG 3 cut(s) 274, 301, 791
BsmAI GTCTC 3 cut(s) 29, 302, 650
BsmBI CGTCTC 1 cut(s) 302
BsmFI GGGAC 3 cut(s) 267, 802, 1402
BsmI GAATGC 1 cut(s) 89
BsnI GGCC 7 cut(s) 161, 168, 530, 536, 752, 1020, 1187
BsoBI CYCGRG 1 cut(s) 785
Bsp1286I GDGCHC 4 cut(s) 141, 1143, 1262, 1442
Bsp13I TCCGGA 1 cut(s) 267
Bsp143I GATC 8 cut(s) 118, 126, 589, 637, 690, 982, 1179, 1417
Bsp1720I GCTNAGC 1 cut(s) 1287
Bsp19I CCATGG 1 cut(s) 816
BspANI GGCC 7 cut(s) 161, 168, 530, 536, 752, 1020, 1187
BspCNI CTCAG 3 cut(s) 80, 1279, 1454
BspEI TCCGGA 1 cut(s) 267
BspFNI CGCG 1 cut(s) 1277
BspHI TCATGA 1 cut(s) 1296
BspLI GGNNCC 2 cut(s) 315, 767
BspPI GGATC 4 cut(s) 121, 584, 645, 1187
BspT107I GGYRCC 2 cut(s) 313, 765
BsrI ACTGG 3 cut(s) 398, 623, 796
BssMI GATC 8 cut(s) 118, 126, 589, 637, 690, 982, 1179, 1417
BssSI CACGAG 1 cut(s) 134
BssT1I CCWWGG 4 cut(s) 273, 651, 816, 1198
Bst2BI CACGAG 1 cut(s) 134
Bst2UI CCWGG 2 cut(s) 754, 1125
Bst4CI ACNGT 5 cut(s) 296, 337, 371, 469, 914
Bst6I CTCTTC 3 cut(s) 179, 1295, 1356
BstDEI CTNAG 3 cut(s) 67, 1287, 1441
BstDSI CCRYGG 3 cut(s) 666, 816, 1275
BstEII GGTNACC 1 cut(s) 1267
BstF5I GGATG 5 cut(s) 640, 676, 1141, 1315, 1387
BstFNI CGCG 1 cut(s) 1277
BstHHI GCGC 1 cut(s) 442
BstKTI GATC 8 cut(s) 121, 129, 592, 640, 693, 985, 1182, 1420
BstMAI GTCTC 3 cut(s) 29, 302, 650
BstMBI GATC 8 cut(s) 118, 126, 589, 637, 690, 982, 1179, 1417
BstMCI CGRYCG 2 cut(s) 169, 295
BstMWI GCNNNNNNNGC 8 cut(s) 448, 517, 671, 801, 818, 1167, 1283, 1319
BstNI CCWGG 2 cut(s) 754, 1125
BstNSI RCATGY 2 cut(s) 43, 1153
BstPAI GACNNNNGTC 1 cut(s) 275
BstPI GGTNACC 1 cut(s) 1267
BstSCI CCNGG 7 cut(s) 300, 752, 784, 785, 963, 1107, 1123
BstSFI CTRYAG 1 cut(s) 568
BstSLI GKGCMC 1 cut(s) 1143
BstUI CGCG 1 cut(s) 1277
BstV1I GCAGC 5 cut(s) 206, 420, 799, 1040, 1303
BstX2I RGATCY 1 cut(s) 1179
BstYI RGATCY 1 cut(s) 1179
BstZI CGGCCG 1 cut(s) 166
BsuRI GGCC 7 cut(s) 161, 168, 530, 536, 752, 1020, 1187
BtgI CCRYGG 3 cut(s) 666, 816, 1275
BtgZI GCGATG 2 cut(s) 1208, 1467
BtsCI GGATG 5 cut(s) 640, 676, 1141, 1315, 1387
BtsI GCAGTG 2 cut(s) 893, 952
BtsIMutI CAGTG 3 cut(s) 474, 893, 952
CciI TCATGA 1 cut(s) 1296
CfoI GCGC 1 cut(s) 442
Cfr13I GGNCC 4 cut(s) 103, 270, 528, 779
Cfr42I CCGCGG 1 cut(s) 1278
Cfr9I CCCGGG 1 cut(s) 785
CseI GACGC 2 cut(s) 440, 1109
Csp6I GTAC 1 cut(s) 766
CviAII CATG 7 cut(s) 40, 226, 437, 817, 1150, 1208, 1297
CviQI GTAC 1 cut(s) 766
DdeI CTNAG 3 cut(s) 67, 1287, 1441
DpnI GATC 8 cut(s) 120, 128, 591, 639, 692, 984, 1181, 1419
DpnII GATC 8 cut(s) 118, 126, 589, 637, 690, 982, 1179, 1417
EaeI YGGCCR 1 cut(s) 166
EagI CGGCCG 1 cut(s) 166
Eam1104I CTCTTC 3 cut(s) 179, 1295, 1356
EarI CTCTTC 3 cut(s) 179, 1295, 1356
EciI GGCGGA 1 cut(s) 269
Ecl136II GAGCTC 3 cut(s) 139, 1260, 1440
EclXI CGGCCG 1 cut(s) 166
Eco130I CCWWGG 4 cut(s) 273, 651, 816, 1198
Eco147I AGGCCT 1 cut(s) 752
Eco24I GRGCYC 3 cut(s) 141, 1262, 1442
Eco47I GGWCC 3 cut(s) 103, 270, 779
Eco52I CGGCCG 1 cut(s) 166
Eco53kI GAGCTC 3 cut(s) 139, 1260, 1440
Eco88I CYCGRG 1 cut(s) 785
Eco91I GGTNACC 1 cut(s) 1267
EcoICRI GAGCTC 3 cut(s) 139, 1260, 1440
EcoO65I GGTNACC 1 cut(s) 1267
EcoRII CCWGG 2 cut(s) 752, 1123
EcoT14I CCWWGG 4 cut(s) 273, 651, 816, 1198
EcoT22I ATGCAT 1 cut(s) 1209
EcoT38I GRGCYC 3 cut(s) 141, 1262, 1442
ErhI CCWWGG 4 cut(s) 273, 651, 816, 1198
Esp3I CGTCTC 1 cut(s) 302
FaeI CATG 7 cut(s) 43, 229, 440, 820, 1153, 1211, 1300
FaqI GGGAC 3 cut(s) 267, 802, 1402
FatI CATG 7 cut(s) 39, 225, 436, 816, 1149, 1207, 1296
FauI CCCGC 2 cut(s) 1163, 1282
FbaI TGATCA 1 cut(s) 118
FblI GTMKAC 1 cut(s) 261
Fnu4HI GCNGC 8 cut(s) 169, 220, 223, 252, 409, 813, 1054, 1292
FokI GGATG 5 cut(s) 627, 683, 1148, 1322, 1394
FriOI GRGCYC 3 cut(s) 141, 1262, 1442
Fsp4HI GCNGC 8 cut(s) 169, 220, 223, 252, 409, 813, 1054, 1292
FspBI CTAG 2 cut(s) 861, 1392
FspI TGCGCA 1 cut(s) 441
GlaI GCGC 1 cut(s) 441
GluI GCNGC 8 cut(s) 169, 220, 223, 252, 409, 813, 1054, 1292
GsuI CTGGAG 1 cut(s) 640
HaeIII GGCC 7 cut(s) 161, 168, 530, 536, 752, 1020, 1187
HapII CCGG 7 cut(s) 268, 301, 644, 786, 964, 1017, 1109
HgaI GACGC 2 cut(s) 440, 1109
HhaI GCGC 1 cut(s) 442
Hin1II CATG 7 cut(s) 43, 229, 440, 820, 1153, 1211, 1300
Hin6I GCGC 1 cut(s) 440
HinP1I GCGC 1 cut(s) 440
HincII GTYRAC 1 cut(s) 1008
HindII GTYRAC 1 cut(s) 1008
HinfI GANTC 5 cut(s) 22, 486, 500, 605, 1068
HpaI GTTAAC 1 cut(s) 1008
HpaII CCGG 7 cut(s) 268, 301, 644, 786, 964, 1017, 1109
HphI GGTGA 6 cut(s) 76, 169, 316, 365, 1072, 1261
Hpy166II GTNNAC 5 cut(s) 262, 782, 1008, 1080, 1141
Hpy188I TCNGA 5 cut(s) 193, 616, 880, 1402, 1480
Hpy188III TCNNGA 9 cut(s) 268, 340, 635, 1177, 1255, 1297, 1325, 1345, 1409
Hpy8I GTNNAC 5 cut(s) 262, 782, 1008, 1080, 1141
Hpy99I CGWCG 2 cut(s) 212, 380
HpyAV CCTTC 5 cut(s) 172, 733, 742, 1351, 1379
HpyCH4III ACNGT 5 cut(s) 296, 337, 371, 469, 914
HpyCH4V TGCA 6 cut(s) 408, 945, 958, 1141, 1161, 1207
HpyF10VI GCNNNNNNNGC 8 cut(s) 448, 517, 671, 801, 818, 1167, 1283, 1319
HpyF3I CTNAG 3 cut(s) 67, 1287, 1441
Hsp92II CATG 7 cut(s) 43, 229, 440, 820, 1153, 1211, 1300
HspAI GCGC 1 cut(s) 440
Kpn2I TCCGGA 1 cut(s) 267
KpnI GGTACC 1 cut(s) 769
Ksp22I TGATCA 1 cut(s) 118
KspAI GTTAAC 1 cut(s) 1008
KspI CCGCGG 1 cut(s) 1278
Kzo9I GATC 8 cut(s) 118, 126, 589, 637, 690, 982, 1179, 1417
LmnI GCTCC 3 cut(s) 144, 853, 1437
Lsp1109I GCAGC 5 cut(s) 206, 420, 799, 1040, 1303
LweI GCATC 4 cut(s) 62, 661, 1300, 1471
MaeI CTAG 2 cut(s) 861, 1392
MaeIII GTNAC 2 cut(s) 337, 1267
MalI GATC 8 cut(s) 120, 128, 591, 639, 692, 984, 1181, 1419
MboI GATC 8 cut(s) 118, 126, 589, 637, 690, 982, 1179, 1417
MboII GAAGA 7 cut(s) 166, 337, 368, 992, 1312, 1373, 1461
MflI RGATCY 1 cut(s) 1179
MhlI GDGCHC 4 cut(s) 141, 1143, 1262, 1442
MluCI AATT 5 cut(s) 13, 610, 823, 1374, 1404
MlyI GAGTC 3 cut(s) 31, 495, 509
MmeI TCCRAC 1 cut(s) 216
Mph1103I ATGCAT 1 cut(s) 1209
MroI TCCGGA 1 cut(s) 267
MseI TTAA 6 cut(s) 540, 681, 867, 1007, 1250, 1464
MslI CAYNNNNRTG 2 cut(s) 38, 1148
MspA1I CMGCKG 3 cut(s) 124, 411, 1277
MspI CCGG 7 cut(s) 268, 301, 644, 786, 964, 1017, 1109
MspR9I CCNGG 7 cut(s) 302, 754, 786, 787, 965, 1109, 1125
Mva1269I GAATGC 1 cut(s) 89
MvaI CCWGG 2 cut(s) 754, 1125
MvnI CGCG 1 cut(s) 1277
MwoI GCNNNNNNNGC 8 cut(s) 448, 517, 671, 801, 818, 1167, 1283, 1319
NciI CCSGG 5 cut(s) 302, 786, 787, 965, 1109
NcoI CCATGG 1 cut(s) 816
NdeII GATC 8 cut(s) 118, 126, 589, 637, 690, 982, 1179, 1417
NlaIII CATG 7 cut(s) 43, 229, 440, 820, 1153, 1211, 1300
NlaIV GGNNCC 2 cut(s) 315, 767
NmeAIII GCCGAG 4 cut(s) 137, 298, 556, 700
NmuCI GTSAC 2 cut(s) 337, 1267
NsbI TGCGCA 1 cut(s) 441
NsiI ATGCAT 1 cut(s) 1209
NspI RCATGY 2 cut(s) 43, 1153
PagI TCATGA 1 cut(s) 1296
PceI AGGCCT 1 cut(s) 752
PciI ACATGT 1 cut(s) 1149
PctI GAATGC 1 cut(s) 89
PfeI GAWTC 2 cut(s) 605, 1068
PkrI GCNGC 8 cut(s) 170, 221, 224, 253, 410, 814, 1055, 1293
PleI GAGTC 3 cut(s) 30, 494, 508
PpsI GAGTC 3 cut(s) 30, 494, 508
PscI ACATGT 1 cut(s) 1149
PshAI GACNNNNGTC 1 cut(s) 275
PsiI TTATAA 1 cut(s) 735
Psp124BI GAGCTC 3 cut(s) 141, 1262, 1442
Psp6I CCWGG 2 cut(s) 752, 1123
PspEI GGTNACC 1 cut(s) 1267
PspGI CCWGG 2 cut(s) 752, 1123
PspN4I GGNNCC 2 cut(s) 315, 767
PspPI GGNCC 4 cut(s) 103, 270, 528, 779
PsuI RGATCY 1 cut(s) 1179
PvuII CAGCTG 1 cut(s) 124
RsaI GTAC 1 cut(s) 767
RsaNI GTAC 1 cut(s) 766
RseI CAYNNNNRTG 2 cut(s) 38, 1148
SacI GAGCTC 3 cut(s) 141, 1262, 1442
SacII CCGCGG 1 cut(s) 1278
SaqAI TTAA 6 cut(s) 540, 681, 867, 1007, 1250, 1464
SatI GCNGC 8 cut(s) 169, 220, 223, 252, 409, 813, 1054, 1292
Sau3AI GATC 8 cut(s) 118, 126, 589, 637, 690, 982, 1179, 1417
Sau96I GGNCC 4 cut(s) 103, 270, 528, 779
SchI GAGTC 3 cut(s) 31, 495, 509
ScrFI CCNGG 7 cut(s) 302, 754, 786, 787, 965, 1109, 1125
SduI GDGCHC 4 cut(s) 141, 1143, 1262, 1442
SfaNI GCATC 4 cut(s) 62, 661, 1300, 1471
SfcI CTRYAG 1 cut(s) 568
Sfr303I CCGCGG 1 cut(s) 1278
SgrBI CCGCGG 1 cut(s) 1278
SinI GGWCC 3 cut(s) 103, 270, 779
SmaI CCCGGG 1 cut(s) 787
SmiMI CAYNNNNRTG 2 cut(s) 38, 1148
SmlI CTYRAG 2 cut(s) 830, 1485
SmoI CTYRAG 2 cut(s) 830, 1485
SpeI ACTAGT 2 cut(s) 860, 1391
Sse9I AATT 5 cut(s) 13, 610, 823, 1374, 1404
SseBI AGGCCT 1 cut(s) 752
SspMI CTAG 2 cut(s) 861, 1392
SstI GAGCTC 3 cut(s) 141, 1262, 1442
StuI AGGCCT 1 cut(s) 752
StyD4I CCNGG 7 cut(s) 300, 752, 784, 785, 963, 1107, 1123
StyI CCWWGG 4 cut(s) 273, 651, 816, 1198
TaaI ACNGT 5 cut(s) 296, 337, 371, 469, 914
TaqI TCGA 8 cut(s) 210, 375, 484, 498, 626, 1129, 1254, 1338
TasI AATT 5 cut(s) 13, 610, 823, 1374, 1404
TauI GCSGC 3 cut(s) 171, 225, 254
TfiI GAWTC 2 cut(s) 605, 1068
Tru1I TTAA 6 cut(s) 540, 681, 867, 1007, 1250, 1464
Tru9I TTAA 6 cut(s) 540, 681, 867, 1007, 1250, 1464
TscAI CASTG 3 cut(s) 474, 900, 952
TseFI GTSAC 2 cut(s) 337, 1267
TseI GCWGC 5 cut(s) 219, 408, 812, 1053, 1291
Tsp45I GTSAC 2 cut(s) 337, 1267
TspDTI ATGAA 6 cut(s) 82, 618, 1224, 1313, 1398, 1473
TspGWI ACGGA 2 cut(s) 95, 582
TspMI CCCGGG 1 cut(s) 785
TspRI CASTG 3 cut(s) 474, 900, 952
VneI GTGCAC 1 cut(s) 1139
VpaK11BI GGWCC 3 cut(s) 103, 270, 779
XapI RAATTY 1 cut(s) 1404
XceI RCATGY 2 cut(s) 43, 1153
XmaI CCCGGG 1 cut(s) 785
XmiI GTMKAC 1 cut(s) 261
XspI CTAG 2 cut(s) 861, 1392
Zsp2I ATGCAT 1 cut(s) 1209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.