RLG00000016997

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000471
Physical Location & Seq
Forward (+)
12022035 .. 12025962
3928 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016997

Sequence Viewer

Length: 1542 bp
ATGATCAGCATCCGCCAGAACCCGAGGACCAAAAGTGCTGAGAGACAAATAGGAAGCAGTAGCAAACAAGAAGCAGCTAGTACAAGTGATGAATTTTACAAAATGGGAACAAGTAAATTCAACAGCTTAGACAATGCTGCTCATGCCTATGCCTCCCTCACCGCATTCATAATGTTGGTCCGTTCCATAGTTGATCAGCTGATCCCCCACGAGCTCCGCTACTGCATCTACTCGGCCTTCGGCCGCCTCTTCACCCCTCGCCCCTCCGACCTCACTCTCATCGTCGATGAGTGCTGCGGCATGGTTCAAAACCAAATCTATGAGGCGGCGGAGGTCTACCTCCGGACCAAGATCAGTCCCCTAAACGACCGTCTCCGGGTGAAAAAGGCACCTCGGCAGAAGAACATTACCGTCACGATTGAAAAGGGTGAAGAAATCAAAGACAGTTTCGACGGGATAAACATCAACTGGCGTTTTGTGTGCAGCGGAGGAGAGAGTGAGCAGAACAGCCATGCGCAACAGAAGCGTCAGTTTGAGCTGACAGTGAATAAGAAACATCGAGTCAAAGTAATTGAGTCCTACTTGCCGTATGTGCTTGACAGGGCCGAGGCCATTAAGAATGAGGACAAAGTTGTGAAGCTCTATAGCCAAGAGGGGTCATATGATCCGTATGATGATGAATCCAATTCGGACTGGAGTTCGATAAATCTGGAGCATCCGGCTACCTTTGAGACACTTGCCATGGATGCCGAGGTTAAGAGAACGATCATTGAGGATTTGGATAGGTTTTTGAGGAGGAGGGAGTTTTATAAGAAGGTTGGGAAGGCCTGGAAAAGAGGGTATCTGTTGTATGGTCCACCCGGGACTGGCAAATCCAGCTTGATTGCTGCCATGGCTAATTATCTCAAGTTTGATATATATGATGTGGAGCTTACTAGTATTGAAGACAACTCGGAGTTGAGGAGGATACTGCTGACTTCGACAAACCGTTCTATCTTGGTCATTGAGGATATTGATTGCAGTGTGGAGGTGCAAAACCGGGAATGTGAGGAGGATGATCATCAACCATCTAACACCAAGTTAACACTCTCCGGCCTACTGAACTTTATAGATGGTTTGTGGTCAAGCTGCGGAGATGAGAGAATCATTGTGTTCACCACCAACCACAAGCACAAGATAGACCCGGCATTGTTGCGTCCTGGTCGAATGGATGTGCACATTCACATGTCATATTGCACTCCAAGCGGGTTCAGGATCTTGGCCTCTAACTACCTTGGTATGCATGAAAGCAATCCTCATCGCCTATGCGGAGAAGTTGAGGAGTTAATCGAGAGCTCAAAGGTCACCCCCGCGGAGATTGCTGAGCAGCTCATGAAGAGTGAGGATGCTGATGTTGCTCTTGAAGGACTTGTCAATTTCCTGAAAAGAAAGAAGGAAGAGAGCAATAAAATTGGGGATGAAGGGACTAATAAATCTGAAATTCAAGAAACAGATCAAAACGCAGAAAAGTGGAGTTCACACTGTCTTGCGATTAACGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

514

Amino Acids

58.41

Weight (kDa)

5.61

Isoelectric Point (pI)

54.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 68 - 161 2.2e-24 Domain associated at C-terminal with AAA
AAA PF00004 281 - 410 2.1e-20 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 412 - 482 8.4e-22 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18190 AT2G18193
fragaria_vesca FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 810
Acc16I TGCGCA 1 cut(s) 516
AccB1I GGYRCC 1 cut(s) 388
AccI GTMKAC 1 cut(s) 336
AccII CGCG 1 cut(s) 1352
AccIII TCCGGA 1 cut(s) 342
AclWI GGATC 3 cut(s) 196, 659, 1262
AcoI YGGCCR 1 cut(s) 241
AcsI RAATTY 3 cut(s) 92, 116, 1479
AfaI GTAC 1 cut(s) 82
AfiI CCNNNNNNNGG 2 cut(s) 376, 866
AflIII ACRYGT 1 cut(s) 1224
AgsI TTSAA 6 cut(s) 121, 308, 422, 944, 1403, 1484
AhlI ACTAGT 1 cut(s) 935
AjnI CCWGG 2 cut(s) 827, 1198
Alw21I GWGCWC 3 cut(s) 216, 1218, 1337
Alw26I GTCTC 3 cut(s) 37, 377, 725
Alw44I GTGCAC 1 cut(s) 1214
AlwI GGATC 3 cut(s) 196, 659, 1262
Ama87I CYCGRG 2 cut(s) 22, 860
Aor13HI TCCGGA 1 cut(s) 342
AoxI GGCC 7 cut(s) 234, 241, 603, 609, 825, 1093, 1260
ApaLI GTGCAC 1 cut(s) 1214
ApeKI GCWGC 7 cut(s) 74, 137, 294, 483, 887, 1128, 1366
ApoI RAATTY 3 cut(s) 92, 116, 1479
AspLEI GCGC 1 cut(s) 517
AspS9I GGNCC 5 cut(s) 27, 178, 345, 603, 854
AsuC2I CCSGG 5 cut(s) 377, 861, 862, 1040, 1184
AsuHPI GGTGA 6 cut(s) 151, 244, 391, 440, 1147, 1336
AvaI CYCGRG 2 cut(s) 22, 860
AvaII GGWCC 4 cut(s) 27, 178, 345, 854
BaeGI GKGCMC 1 cut(s) 1218
BanI GGYRCC 1 cut(s) 388
BanII GRGCYC 2 cut(s) 216, 1337
BauI CACGAG 1 cut(s) 209
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 3 cut(s) 216, 1218, 1337
BbvI GCAGC 7 cut(s) 86, 124, 281, 495, 874, 1115, 1378
BccI CCATC 2 cut(s) 1075, 1106
BceAI ACGGC 1 cut(s) 571
BciT130I CCWGG 2 cut(s) 829, 1200
BciVI GTATCC 1 cut(s) 960
BclI TGATCA 3 cut(s) 3, 193, 1057
BcnI CCSGG 5 cut(s) 377, 861, 862, 1040, 1184
BcoDI GTCTC 3 cut(s) 37, 377, 725
BcuI ACTAGT 1 cut(s) 935
BfaI CTAG 2 cut(s) 78, 936
BfmI CTRYAG 1 cut(s) 643
BfuI GTATCC 1 cut(s) 960
BlpI GCTNAGC 1 cut(s) 1362
Bme1390I CCNGG 7 cut(s) 377, 829, 861, 862, 1040, 1184, 1200
Bme18I GGWCC 4 cut(s) 27, 178, 345, 854
BmeT110I CYCGRG 2 cut(s) 22, 860
BmgT120I GGNCC 5 cut(s) 27, 178, 345, 603, 854
BmiI GGNNCC 1 cut(s) 390
BmrFI CCNGG 7 cut(s) 377, 829, 861, 862, 1040, 1184, 1200
BmsI GCATC 5 cut(s) 18, 234, 724, 736, 1375
BpiI GAAGAC 1 cut(s) 951
BpmI CTGGAG 2 cut(s) 715, 731
Bpu1102I GCTNAGC 1 cut(s) 1362
BpuEI CTTGAG 1 cut(s) 890
BpuMI CCSGG 5 cut(s) 377, 861, 862, 1040, 1184
BsaBI GATNNNNATC 3 cut(s) 8, 461, 1059
BsaJI CCNNGG 9 cut(s) 23, 392, 606, 741, 750, 860, 891, 1273, 1350
BsaWI WCCGGW 1 cut(s) 342
Bsc4I CCNNNNNNNGG 2 cut(s) 376, 866
Bse1I ACTGG 3 cut(s) 473, 698, 871
Bse8I GATNNNNATC 3 cut(s) 8, 461, 1059
BseAI TCCGGA 1 cut(s) 342
BseBI CCWGG 2 cut(s) 829, 1200
BseDI CCNNGG 9 cut(s) 23, 392, 606, 741, 750, 860, 891, 1273, 1350
BseGI GGATG 7 cut(s) 9, 715, 751, 1060, 1216, 1390, 1462
BseJI GATNNNNATC 3 cut(s) 8, 461, 1059
BseLI CCNNNNNNNGG 2 cut(s) 376, 866
BseMII CTCAG 2 cut(s) 30, 1353
BseNI ACTGG 3 cut(s) 473, 698, 871
BseRI GAGGAG 6 cut(s) 504, 808, 811, 976, 1064, 1334
BseSI GKGCMC 1 cut(s) 1218
BseX3I CGGCCG 1 cut(s) 241
BseXI GCAGC 7 cut(s) 86, 124, 281, 495, 874, 1115, 1378
BsgI GTGCAG 1 cut(s) 502
Bsh1236I CGCG 1 cut(s) 1352
Bsh1285I CGRYCG 2 cut(s) 244, 370
BshFI GGCC 7 cut(s) 236, 243, 605, 611, 827, 1095, 1262
BshNI GGYRCC 1 cut(s) 388
BsiEI CGRYCG 2 cut(s) 244, 370
BsiHKAI GWGCWC 3 cut(s) 216, 1218, 1337
BsiHKCI CYCGRG 2 cut(s) 22, 860
BsiSI CCGG 7 cut(s) 343, 376, 719, 861, 1039, 1092, 1184
BslFI GGGAC 3 cut(s) 342, 877, 1477
BslI CCNNNNNNNGG 2 cut(s) 376, 866
BsmAI GTCTC 3 cut(s) 37, 377, 725
BsmBI CGTCTC 1 cut(s) 377
BsmFI GGGAC 3 cut(s) 342, 877, 1477
BsmI GAATGC 1 cut(s) 164
BsnI GGCC 7 cut(s) 236, 243, 605, 611, 827, 1095, 1262
BsoBI CYCGRG 2 cut(s) 22, 860
Bsp1286I GDGCHC 3 cut(s) 216, 1218, 1337
Bsp13I TCCGGA 1 cut(s) 342
Bsp143I GATC 9 cut(s) 3, 193, 201, 351, 664, 765, 1057, 1254, 1492
Bsp1720I GCTNAGC 1 cut(s) 1362
Bsp19I CCATGG 2 cut(s) 741, 891
BspANI GGCC 7 cut(s) 236, 243, 605, 611, 827, 1095, 1262
BspCNI CTCAG 2 cut(s) 31, 1354
BspEI TCCGGA 1 cut(s) 342
BspFNI CGCG 1 cut(s) 1352
BspHI TCATGA 1 cut(s) 1371
BspLI GGNNCC 1 cut(s) 390
BspPI GGATC 3 cut(s) 196, 659, 1262
BspT107I GGYRCC 1 cut(s) 388
BsrI ACTGG 3 cut(s) 473, 698, 871
BssECI CCNNGG 9 cut(s) 23, 392, 606, 741, 750, 860, 891, 1273, 1350
BssMI GATC 9 cut(s) 3, 193, 201, 351, 664, 765, 1057, 1254, 1492
BssSI CACGAG 1 cut(s) 209
BssT1I CCWWGG 3 cut(s) 741, 891, 1273
Bst2BI CACGAG 1 cut(s) 209
Bst2UI CCWGG 2 cut(s) 829, 1200
Bst4CI ACNGT 6 cut(s) 371, 412, 446, 544, 989, 1523
Bst6I CTCTTC 3 cut(s) 254, 1370, 1431
BstDEI CTNAG 3 cut(s) 39, 127, 1362
BstDSI CCRYGG 3 cut(s) 741, 891, 1350
BstEII GGTNACC 1 cut(s) 1342
BstF5I GGATG 7 cut(s) 9, 715, 751, 1060, 1216, 1390, 1462
BstFNI CGCG 1 cut(s) 1352
BstHHI GCGC 1 cut(s) 517
BstKTI GATC 9 cut(s) 6, 196, 204, 354, 667, 768, 1060, 1257, 1495
BstMAI GTCTC 3 cut(s) 37, 377, 725
BstMBI GATC 9 cut(s) 3, 193, 201, 351, 664, 765, 1057, 1254, 1492
BstMCI CGRYCG 2 cut(s) 244, 370
BstNI CCWGG 2 cut(s) 829, 1200
BstNSI RCATGY 1 cut(s) 1228
BstPI GGTNACC 1 cut(s) 1342
BstSCI CCNGG 7 cut(s) 375, 827, 859, 860, 1038, 1182, 1198
BstSFI CTRYAG 1 cut(s) 643
BstSLI GKGCMC 1 cut(s) 1218
BstUI CGCG 1 cut(s) 1352
BstV1I GCAGC 7 cut(s) 86, 124, 281, 495, 874, 1115, 1378
BstV2I GAAGAC 1 cut(s) 951
BstX2I RGATCY 1 cut(s) 1254
BstYI RGATCY 1 cut(s) 1254
BstZI CGGCCG 1 cut(s) 241
BsuI GTATCC 1 cut(s) 960
BsuRI GGCC 7 cut(s) 236, 243, 605, 611, 827, 1095, 1262
BtgI CCRYGG 3 cut(s) 741, 891, 1350
BtgZI GCGATG 1 cut(s) 1283
BtsCI GGATG 7 cut(s) 9, 715, 751, 1060, 1216, 1390, 1462
BtsI GCAGTG 1 cut(s) 1027
BtsIMutI CAGTG 3 cut(s) 549, 1027, 1519
CciI TCATGA 1 cut(s) 1371
CfoI GCGC 1 cut(s) 517
Cfr13I GGNCC 5 cut(s) 27, 178, 345, 603, 854
Cfr42I CCGCGG 1 cut(s) 1353
Cfr9I CCCGGG 1 cut(s) 860
CseI GACGC 2 cut(s) 515, 1184
Csp6I GTAC 1 cut(s) 81
CviAII CATG 8 cut(s) 143, 301, 512, 742, 892, 1225, 1283, 1372
CviQI GTAC 1 cut(s) 81
DdeI CTNAG 3 cut(s) 39, 127, 1362
DpnI GATC 9 cut(s) 5, 195, 203, 353, 666, 767, 1059, 1256, 1494
DpnII GATC 9 cut(s) 3, 193, 201, 351, 664, 765, 1057, 1254, 1492
EaeI YGGCCR 1 cut(s) 241
EagI CGGCCG 1 cut(s) 241
Eam1104I CTCTTC 3 cut(s) 254, 1370, 1431
EarI CTCTTC 3 cut(s) 254, 1370, 1431
EciI GGCGGA 1 cut(s) 344
Ecl136II GAGCTC 2 cut(s) 214, 1335
EclXI CGGCCG 1 cut(s) 241
Eco130I CCWWGG 3 cut(s) 741, 891, 1273
Eco147I AGGCCT 1 cut(s) 827
Eco24I GRGCYC 2 cut(s) 216, 1337
Eco47I GGWCC 4 cut(s) 27, 178, 345, 854
Eco52I CGGCCG 1 cut(s) 241
Eco53kI GAGCTC 2 cut(s) 214, 1335
Eco88I CYCGRG 2 cut(s) 22, 860
Eco91I GGTNACC 1 cut(s) 1342
EcoICRI GAGCTC 2 cut(s) 214, 1335
EcoO65I GGTNACC 1 cut(s) 1342
EcoRII CCWGG 2 cut(s) 827, 1198
EcoT14I CCWWGG 3 cut(s) 741, 891, 1273
EcoT22I ATGCAT 1 cut(s) 1284
EcoT38I GRGCYC 2 cut(s) 216, 1337
ErhI CCWWGG 3 cut(s) 741, 891, 1273
Esp3I CGTCTC 1 cut(s) 377
FaeI CATG 8 cut(s) 146, 304, 515, 745, 895, 1228, 1286, 1375
FaqI GGGAC 3 cut(s) 342, 877, 1477
FatI CATG 8 cut(s) 142, 300, 511, 741, 891, 1224, 1282, 1371
FauI CCCGC 2 cut(s) 1238, 1357
FauNDI CATATG 1 cut(s) 661
FbaI TGATCA 3 cut(s) 3, 193, 1057
FblI GTMKAC 1 cut(s) 336
FokI GGATG 6 cut(s) 702, 758, 1067, 1223, 1397, 1469
FriOI GRGCYC 2 cut(s) 216, 1337
FspBI CTAG 2 cut(s) 78, 936
FspI TGCGCA 1 cut(s) 516
GlaI GCGC 1 cut(s) 516
GsuI CTGGAG 2 cut(s) 715, 731
HaeIII GGCC 7 cut(s) 236, 243, 605, 611, 827, 1095, 1262
HapII CCGG 7 cut(s) 343, 376, 719, 861, 1039, 1092, 1184
HgaI GACGC 2 cut(s) 515, 1184
HhaI GCGC 1 cut(s) 517
Hin1II CATG 8 cut(s) 146, 304, 515, 745, 895, 1228, 1286, 1375
Hin6I GCGC 1 cut(s) 515
HinP1I GCGC 1 cut(s) 515
HincII GTYRAC 1 cut(s) 1083
HindII GTYRAC 1 cut(s) 1083
HinfI GANTC 4 cut(s) 561, 575, 680, 1143
HpaI GTTAAC 1 cut(s) 1083
HpaII CCGG 7 cut(s) 343, 376, 719, 861, 1039, 1092, 1184
HphI GGTGA 6 cut(s) 151, 244, 391, 440, 1147, 1336
Hpy166II GTNNAC 6 cut(s) 337, 857, 1083, 1155, 1216, 1517
Hpy188I TCNGA 4 cut(s) 268, 691, 955, 1477
Hpy188III TCNNGA 9 cut(s) 343, 415, 710, 1252, 1330, 1372, 1400, 1420, 1484
Hpy8I GTNNAC 6 cut(s) 337, 857, 1083, 1155, 1216, 1517
Hpy99I CGWCG 2 cut(s) 287, 455
HpyAV CCTTC 6 cut(s) 247, 808, 817, 1397, 1426, 1454
HpyCH4III ACNGT 6 cut(s) 371, 412, 446, 544, 989, 1523
HpyCH4V TGCA 7 cut(s) 225, 483, 1020, 1033, 1216, 1236, 1282
HpyF3I CTNAG 3 cut(s) 39, 127, 1362
Hsp92II CATG 8 cut(s) 146, 304, 515, 745, 895, 1228, 1286, 1375
HspAI GCGC 1 cut(s) 515
Kpn2I TCCGGA 1 cut(s) 342
Ksp22I TGATCA 3 cut(s) 3, 193, 1057
KspAI GTTAAC 1 cut(s) 1083
KspI CCGCGG 1 cut(s) 1353
Kzo9I GATC 9 cut(s) 3, 193, 201, 351, 664, 765, 1057, 1254, 1492
LmnI GCTCC 3 cut(s) 219, 712, 928
Lsp1109I GCAGC 7 cut(s) 86, 124, 281, 495, 874, 1115, 1378
LweI GCATC 5 cut(s) 18, 234, 724, 736, 1375
MaeI CTAG 2 cut(s) 78, 936
MaeIII GTNAC 2 cut(s) 412, 1342
MalI GATC 9 cut(s) 5, 195, 203, 353, 666, 767, 1059, 1256, 1494
MboI GATC 9 cut(s) 3, 193, 201, 351, 664, 765, 1057, 1254, 1492
MboII GAAGA 6 cut(s) 241, 412, 443, 956, 1387, 1448
MflI RGATCY 1 cut(s) 1254
MhlI GDGCHC 3 cut(s) 216, 1218, 1337
MluCI AATT 8 cut(s) 92, 116, 570, 685, 898, 1414, 1449, 1479
MlyI GAGTC 2 cut(s) 570, 584
MmeI TCCRAC 1 cut(s) 291
Mph1103I ATGCAT 1 cut(s) 1284
MroI TCCGGA 1 cut(s) 342
MseI TTAA 5 cut(s) 615, 756, 1082, 1325, 1533
MslI CAYNNNNRTG 2 cut(s) 147, 1223
MspA1I CMGCKG 3 cut(s) 199, 486, 1352
MspI CCGG 7 cut(s) 343, 376, 719, 861, 1039, 1092, 1184
MspR9I CCNGG 7 cut(s) 377, 829, 861, 862, 1040, 1184, 1200
Mva1269I GAATGC 1 cut(s) 164
MvaI CCWGG 2 cut(s) 829, 1200
MvnI CGCG 1 cut(s) 1352
NciI CCSGG 5 cut(s) 377, 861, 862, 1040, 1184
NcoI CCATGG 2 cut(s) 741, 891
NdeI CATATG 1 cut(s) 661
NdeII GATC 9 cut(s) 3, 193, 201, 351, 664, 765, 1057, 1254, 1492
NlaIII CATG 8 cut(s) 146, 304, 515, 745, 895, 1228, 1286, 1375
NlaIV GGNNCC 1 cut(s) 390
NmeAIII GCCGAG 4 cut(s) 212, 373, 631, 775
NmuCI GTSAC 2 cut(s) 412, 1342
NsbI TGCGCA 1 cut(s) 516
NsiI ATGCAT 1 cut(s) 1284
NspI RCATGY 1 cut(s) 1228
PagI TCATGA 1 cut(s) 1371
PceI AGGCCT 1 cut(s) 827
PciI ACATGT 1 cut(s) 1224
PctI GAATGC 1 cut(s) 164
PfeI GAWTC 2 cut(s) 680, 1143
PleI GAGTC 2 cut(s) 569, 583
PpsI GAGTC 2 cut(s) 569, 583
PscI ACATGT 1 cut(s) 1224
PsiI TTATAA 1 cut(s) 810
Psp124BI GAGCTC 2 cut(s) 216, 1337
Psp6I CCWGG 2 cut(s) 827, 1198
PspEI GGTNACC 1 cut(s) 1342
PspGI CCWGG 2 cut(s) 827, 1198
PspN4I GGNNCC 1 cut(s) 390
PspPI GGNCC 5 cut(s) 27, 178, 345, 603, 854
PsuI RGATCY 1 cut(s) 1254
PvuII CAGCTG 1 cut(s) 199
RsaI GTAC 1 cut(s) 82
RsaNI GTAC 1 cut(s) 81
RseI CAYNNNNRTG 2 cut(s) 147, 1223
SacI GAGCTC 2 cut(s) 216, 1337
SacII CCGCGG 1 cut(s) 1353
SaqAI TTAA 5 cut(s) 615, 756, 1082, 1325, 1533
Sau3AI GATC 9 cut(s) 3, 193, 201, 351, 664, 765, 1057, 1254, 1492
Sau96I GGNCC 5 cut(s) 27, 178, 345, 603, 854
SchI GAGTC 2 cut(s) 570, 584
ScrFI CCNGG 7 cut(s) 377, 829, 861, 862, 1040, 1184, 1200
SduI GDGCHC 3 cut(s) 216, 1218, 1337
SfaNI GCATC 5 cut(s) 18, 234, 724, 736, 1375
SfcI CTRYAG 1 cut(s) 643
Sfr303I CCGCGG 1 cut(s) 1353
SgrBI CCGCGG 1 cut(s) 1353
SinI GGWCC 4 cut(s) 27, 178, 345, 854
SmaI CCCGGG 1 cut(s) 862
SmiMI CAYNNNNRTG 2 cut(s) 147, 1223
SmlI CTYRAG 1 cut(s) 905
SmoI CTYRAG 1 cut(s) 905
SpeI ACTAGT 1 cut(s) 935
Sse9I AATT 8 cut(s) 92, 116, 570, 685, 898, 1414, 1449, 1479
SseBI AGGCCT 1 cut(s) 827
SspMI CTAG 2 cut(s) 78, 936
SstI GAGCTC 2 cut(s) 216, 1337
StuI AGGCCT 1 cut(s) 827
StyD4I CCNGG 7 cut(s) 375, 827, 859, 860, 1038, 1182, 1198
StyI CCWWGG 3 cut(s) 741, 891, 1273
TaaI ACNGT 6 cut(s) 371, 412, 446, 544, 989, 1523
TaqI TCGA 7 cut(s) 285, 450, 559, 701, 980, 1204, 1329
TasI AATT 8 cut(s) 92, 116, 570, 685, 898, 1414, 1449, 1479
TatI WGTACW 1 cut(s) 80
TauI GCSGC 3 cut(s) 246, 300, 329
TfiI GAWTC 2 cut(s) 680, 1143
Tru1I TTAA 5 cut(s) 615, 756, 1082, 1325, 1533
Tru9I TTAA 5 cut(s) 615, 756, 1082, 1325, 1533
TscAI CASTG 3 cut(s) 549, 1027, 1526
TseFI GTSAC 2 cut(s) 412, 1342
TseI GCWGC 7 cut(s) 74, 137, 294, 483, 887, 1128, 1366
Tsp45I GTSAC 2 cut(s) 412, 1342
TspDTI ATGAA 6 cut(s) 105, 157, 693, 1299, 1388, 1473
TspGWI ACGGA 2 cut(s) 170, 657
TspMI CCCGGG 1 cut(s) 860
TspRI CASTG 3 cut(s) 549, 1027, 1526
VneI GTGCAC 1 cut(s) 1214
VpaK11BI GGWCC 4 cut(s) 27, 178, 345, 854
XapI RAATTY 3 cut(s) 92, 116, 1479
XceI RCATGY 1 cut(s) 1228
XmaI CCCGGG 1 cut(s) 860
XmiI GTMKAC 1 cut(s) 336
XspI CTAG 2 cut(s) 78, 936
Zsp2I ATGCAT 1 cut(s) 1284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.