FvH4_1g12731

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000471
Physical Location & Seq
Reverse (-)
7012225 .. 7013793
1569 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g12731.t1

Sequence Viewer

Length: 1371 bp
ATGCCCACAACAGCCTCGTCCTTGTTCTCCGCCTACGCCTCCTTGACAGCATTCCTCATGTTGGCTAATTCCATGGCGGACCAGCTCATCCCCCACTGGCTCCGCTCCTACCTCCACTCCGTCCTCCCCTTCTTCTACACCCCTAAATCCTCCACCCTCACTCTCATAGTCGACGAGATGTCCGGCATGAACAACAACCAAGTCTACGAGGCGGCGCAGGTCTACCTCCAAACCAAGATCAGTTCTATCAACGAACGTCTAAAGGTCAGCAAAACCCCTAGGCAAAAGACCATAACTCTCTCCATTGAGCAAAACGAGGAGATCATTGACGCTTTCGAGAACATCAAGCTCAAGTGGCGCTACGTGTGCAGCGAAAGCAAGGATCATCATCATGGTGATGGTGATAAGAAACACTTTGAGCTAACGTTTCTCAAGAAGCACAAAGCGTCGGTGGTGGAAGCATACTTGCCATATGTGTTGGCTAGGGCAAAGGCGATTAACGAAGAGGAGAAGGTGCTCAAGCTCGACTCGAGTCACTCCGGTTCGGTTGATCTTGAGCACCCTTCGACTTTTGACACATTGGCTATTGATCCGGAGCTAAAGAGCATGATTATCGACGATTTGGATAGGTTTGTGAAGAGGAAGGAGTTCTATAAGAAGGTTGGGAAGGCTTGGAAAAGAGGGTACTTGCTATATGGTCCGCCTGGCACTGGCAAGTCTAGCTTGATTGCAGCCATGGCCAATTACCTCAAGTTTGATGTGTATGATTTGGAGCTTAGTAATGTTTACTGCGACCGTGATTTGAAGAGGAGATTGCTGGCTACTTCAAATCGGTCCATCTTGGTGATTGAGGACATTGACTGCAACGCCGAAACCGAAAACCGGGAGACAGATAGGCAGGTTCAACGCTCTAGCAACAATACGTTCTCGCTGTCAGGTCTGCTCAACTTCATAGATGGTTTGTGGTCAAGTATTGGTGATGAGAGGATCATTATCTTCACCACTAACCATAAGGATCGGCTAGACCCTGCATTGTTGCGACCGGGACGTATGGACGTGCACATTCATATGTCTTATTGCACTCCAAGCGGCTTCAGGATCTTGGCCTCGAACTACCTTGGCATTCATGAGAGCAACCCTCATCGGCTCTGCGGAGAGATTGAAGGGTTGATAGAGAGCACAAACGTCACCCCTGCGGAGGTTGCGGAGGAGCTAATGAAGAGTGATGATGCTGATGTTGCTCTACAAGGACTTGTCAATTTCCTCAAAAGAAAGGAGATCGAGAACAATGAGACCAAGGATGAAGGGACTAATAAAACTGAAGATCAAGAAGCAAAAAAAGGGAACGAGTCTGTTTTATCTGAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

457

Amino Acids

51.73

Weight (kDa)

5.76

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 30 - 123 1.7e-24 Domain associated at C-terminal with AAA
AAA PF00004 229 - 358 4.9e-20 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 360 - 432 5e-23 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18190 AT2G18193
fragaria_vesca FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 208, 889
AccBSI CCGCTC 1 cut(s) 105
AccI GTMKAC 3 cut(s) 171, 204, 222
AccIII TCCGGA 1 cut(s) 592
AciI CCGC 9 cut(s) 30, 77, 103, 212, 701, 1089, 1152, 1196, 1205
AclI AACGTT 1 cut(s) 425
AclWI GGATC 5 cut(s) 390, 584, 995, 1023, 1106
AcoI YGGCCR 1 cut(s) 738
AcuI CTGAAG 2 cut(s) 1078, 1341
AfaI GTAC 1 cut(s) 686
AfiI CCNNNNNNNGG 4 cut(s) 61, 710, 882, 1198
AflIII ACRYGT 1 cut(s) 363
AgsI TTSAA 4 cut(s) 805, 828, 905, 1163
AhdI GACNNNNNGTC 1 cut(s) 178
AjiI CACGTC 1 cut(s) 1057
AjnI CCWGG 1 cut(s) 703
AluBI AGCT 8 cut(s) 85, 349, 421, 523, 598, 723, 775, 1213
AluI AGCT 8 cut(s) 85, 349, 421, 523, 598, 723, 775, 1213
Alw21I GWGCWC 4 cut(s) 519, 561, 1062, 1181
Alw26I GTCTC 2 cut(s) 881, 1286
Alw44I GTGCAC 1 cut(s) 1058
AlwI GGATC 5 cut(s) 390, 584, 995, 1023, 1106
Ama87I CYCGRG 1 cut(s) 529
Aor13HI TCCGGA 1 cut(s) 592
AoxI GGCC 2 cut(s) 738, 1104
ApaLI GTGCAC 1 cut(s) 1058
ApeKI GCWGC 2 cut(s) 369, 731
Asp700I GAANNNNTTC 1 cut(s) 647
AspA2I CCTAGG 1 cut(s) 278
AspLEI GCGC 2 cut(s) 217, 360
AspS9I GGNCC 3 cut(s) 79, 698, 834
AsuC2I CCSGG 2 cut(s) 884, 1044
AsuHPI GGTGA 6 cut(s) 407, 413, 856, 989, 991, 1180
AvaI CYCGRG 1 cut(s) 529
AvaII GGWCC 3 cut(s) 79, 698, 834
AvrII CCTAGG 1 cut(s) 278
BaeGI GKGCMC 1 cut(s) 1062
BalI TGGCCA 1 cut(s) 740
Bbv12I GWGCWC 4 cut(s) 519, 561, 1062, 1181
BbvI GCAGC 2 cut(s) 381, 743
BccI CCATC 3 cut(s) 392, 845, 950
BcgI CGANNNNNNTGC 2 cut(s) 595, 629
BciT130I CCWGG 1 cut(s) 705
BcnI CCSGG 2 cut(s) 884, 1044
BcoDI GTCTC 2 cut(s) 881, 1286
BfaI CTAG 5 cut(s) 279, 483, 720, 912, 1022
BfoI RGCGCY 1 cut(s) 361
BfuAI ACCTGC 2 cut(s) 208, 889
BisI GCNGC 4 cut(s) 213, 370, 732, 1090
BlnI CCTAGG 1 cut(s) 278
BlsI GCNGC 4 cut(s) 214, 371, 733, 1091
Bme1390I CCNGG 3 cut(s) 705, 884, 1044
Bme18I GGWCC 3 cut(s) 79, 698, 834
BmeRI GACNNNNNGTC 1 cut(s) 178
BmeT110I CYCGRG 1 cut(s) 529
BmgBI CACGTC 1 cut(s) 1057
BmgT120I GGNCC 3 cut(s) 79, 698, 834
BmiI GGNNCC 1 cut(s) 101
BmrFI CCNGG 3 cut(s) 705, 884, 1044
BmsI GCATC 1 cut(s) 1219
BoxI GACNNNNGTC 1 cut(s) 531
BplI GAGNNNNNCTC 2 cut(s) 1123, 1155
BpuEI CTTGAG 5 cut(s) 335, 416, 503, 575, 734
BpuMI CCSGG 2 cut(s) 884, 1044
BsaAI YACGTR 1 cut(s) 364
BsaBI GATNNNNATC 2 cut(s) 387, 992
BsaI GGTCTC 1 cut(s) 1286
BsaJI CCNNGG 5 cut(s) 72, 278, 735, 1117, 1296
BsaWI WCCGGW 2 cut(s) 539, 592
BsaXI ACNNNNNCTCC 2 cut(s) 101, 131
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 710, 882, 1198
Bse1I ACTGG 2 cut(s) 101, 715
Bse8I GATNNNNATC 2 cut(s) 387, 992
BseAI TCCGGA 1 cut(s) 592
BseBI CCWGG 1 cut(s) 705
BseDI CCNNGG 5 cut(s) 72, 278, 735, 1117, 1296
BseGI GGATG 2 cut(s) 87, 1306
BseJI GATNNNNATC 2 cut(s) 387, 992
BseLI CCNNNNNNNGG 4 cut(s) 61, 710, 882, 1198
BseNI ACTGG 2 cut(s) 101, 715
BseRI GAGGAG 4 cut(s) 332, 521, 823, 1223
BseSI GKGCMC 1 cut(s) 1062
BseXI GCAGC 2 cut(s) 381, 743
BsgI GTGCAG 1 cut(s) 388
Bsh1285I CGRYCG 2 cut(s) 796, 1043
BshFI GGCC 2 cut(s) 740, 1106
BsiEI CGRYCG 2 cut(s) 796, 1043
BsiHKAI GWGCWC 4 cut(s) 519, 561, 1062, 1181
BsiHKCI CYCGRG 1 cut(s) 529
BsiSI CCGG 5 cut(s) 183, 540, 593, 883, 1043
BslFI GGGAC 2 cut(s) 1059, 1321
BslI CCNNNNNNNGG 4 cut(s) 61, 710, 882, 1198
BsmAI GTCTC 2 cut(s) 881, 1286
BsmFI GGGAC 2 cut(s) 1059, 1321
BsmI GAATGC 2 cut(s) 50, 1122
BsnI GGCC 2 cut(s) 740, 1106
Bso31I GGTCTC 1 cut(s) 1286
BsoBI CYCGRG 1 cut(s) 529
Bsp1286I GDGCHC 4 cut(s) 519, 561, 1062, 1181
Bsp13I TCCGGA 1 cut(s) 592
Bsp19I CCATGG 2 cut(s) 72, 735
BspACI CCGC 9 cut(s) 30, 77, 103, 212, 701, 1089, 1152, 1196, 1205
BspANI GGCC 2 cut(s) 740, 1106
BspEI TCCGGA 1 cut(s) 592
BspHI TCATGA 1 cut(s) 1126
BspLI GGNNCC 1 cut(s) 101
BspMI ACCTGC 2 cut(s) 208, 889
BspPI GGATC 5 cut(s) 390, 584, 995, 1023, 1106
BspTNI GGTCTC 1 cut(s) 1286
BsrBI CCGCTC 1 cut(s) 105
BsrI ACTGG 2 cut(s) 101, 715
BssECI CCNNGG 5 cut(s) 72, 278, 735, 1117, 1296
BssT1I CCWWGG 5 cut(s) 72, 278, 735, 1117, 1296
Bst2UI CCWGG 1 cut(s) 705
Bst4CI ACNGT 1 cut(s) 797
Bst6I CTCTTC 4 cut(s) 498, 632, 800, 1214
BstBAI YACGTR 1 cut(s) 364
BstC8I GCNNGC 1 cut(s) 819
BstDEI CTNAG 1 cut(s) 776
BstDSI CCRYGG 2 cut(s) 72, 735
BstF5I GGATG 2 cut(s) 87, 1306
BstH2I RGCGCY 1 cut(s) 361
BstHHI GCGC 2 cut(s) 217, 360
BstMAI GTCTC 2 cut(s) 881, 1286
BstMCI CGRYCG 2 cut(s) 796, 1043
BstMWI GCNNNNNNNGC 8 cut(s) 355, 366, 375, 720, 737, 1086, 1202, 1238
BstNI CCWGG 1 cut(s) 705
BstPAI GACNNNNGTC 1 cut(s) 531
BstSCI CCNGG 3 cut(s) 703, 882, 1042
BstSLI GKGCMC 1 cut(s) 1062
BstV1I GCAGC 2 cut(s) 381, 743
BstX2I RGATCY 1 cut(s) 1098
BstYI RGATCY 1 cut(s) 1098
BsuRI GGCC 2 cut(s) 740, 1106
BtgI CCRYGG 2 cut(s) 72, 735
BtrI CACGTC 1 cut(s) 1057
BtsCI GGATG 2 cut(s) 87, 1306
BtsIMutI CAGTG 2 cut(s) 94, 708
BveI ACCTGC 2 cut(s) 208, 889
Cac8I GCNNGC 1 cut(s) 819
CciI TCATGA 1 cut(s) 1126
CfoI GCGC 2 cut(s) 217, 360
Cfr13I GGNCC 3 cut(s) 79, 698, 834
CseI GACGC 2 cut(s) 338, 435
Csp6I GTAC 1 cut(s) 685
CviAII CATG 7 cut(s) 58, 73, 187, 392, 607, 736, 1127
CviQI GTAC 1 cut(s) 685
DdeI CTNAG 1 cut(s) 776
DriI GACNNNNNGTC 1 cut(s) 178
EaeI YGGCCR 1 cut(s) 738
Eam1104I CTCTTC 4 cut(s) 498, 632, 800, 1214
Eam1105I GACNNNNNGTC 1 cut(s) 178
EarI CTCTTC 4 cut(s) 498, 632, 800, 1214
EciI GGCGGA 3 cut(s) 19, 92, 690
Eco130I CCWWGG 5 cut(s) 72, 278, 735, 1117, 1296
Eco31I GGTCTC 1 cut(s) 1286
Eco47I GGWCC 3 cut(s) 79, 698, 834
Eco57I CTGAAG 2 cut(s) 1078, 1341
Eco88I CYCGRG 1 cut(s) 529
EcoRII CCWGG 1 cut(s) 703
EcoT14I CCWWGG 5 cut(s) 72, 278, 735, 1117, 1296
ErhI CCWWGG 5 cut(s) 72, 278, 735, 1117, 1296
FaeI CATG 7 cut(s) 61, 76, 190, 395, 610, 739, 1130
FalI AAGNNNNNCTT 4 cut(s) 398, 430, 707, 739
FaqI GGGAC 2 cut(s) 1059, 1321
FatI CATG 7 cut(s) 57, 72, 186, 391, 606, 735, 1126
FauNDI CATATG 2 cut(s) 472, 1068
FblI GTMKAC 3 cut(s) 171, 204, 222
Fnu4HI GCNGC 4 cut(s) 213, 370, 732, 1090
FokI GGATG 2 cut(s) 74, 1313
Fsp4HI GCNGC 4 cut(s) 213, 370, 732, 1090
FspBI CTAG 5 cut(s) 279, 483, 720, 912, 1022
GlaI GCGC 2 cut(s) 216, 359
GluI GCNGC 4 cut(s) 213, 370, 732, 1090
HaeII RGCGCY 1 cut(s) 361
HaeIII GGCC 2 cut(s) 740, 1106
HapII CCGG 5 cut(s) 183, 540, 593, 883, 1043
HgaI GACGC 2 cut(s) 338, 435
HhaI GCGC 2 cut(s) 217, 360
Hin1II CATG 7 cut(s) 61, 76, 190, 395, 610, 739, 1130
Hin6I GCGC 2 cut(s) 215, 358
HinP1I GCGC 2 cut(s) 215, 358
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HinfI GANTC 3 cut(s) 527, 532, 1349
HpaII CCGG 5 cut(s) 183, 540, 593, 883, 1043
HphI GGTGA 6 cut(s) 407, 413, 856, 989, 991, 1180
Hpy166II GTNNAC 5 cut(s) 172, 205, 223, 787, 1060
Hpy188I TCNGA 1 cut(s) 1363
Hpy188III TCNNGA 8 cut(s) 337, 433, 554, 593, 1096, 1127, 1282, 1328
Hpy8I GTNNAC 5 cut(s) 172, 205, 223, 787, 1060
Hpy99I CGWCG 3 cut(s) 176, 451, 620
HpyAV CCTTC 8 cut(s) 139, 505, 573, 637, 652, 661, 1157, 1298
HpyCH4III ACNGT 1 cut(s) 797
HpyCH4IV ACGT 7 cut(s) 256, 363, 425, 923, 1048, 1056, 1185
HpyCH4V TGCA 6 cut(s) 369, 731, 864, 1031, 1060, 1080
HpyF10VI GCNNNNNNNGC 8 cut(s) 355, 366, 375, 720, 737, 1086, 1202, 1238
HpyF3I CTNAG 1 cut(s) 776
HpySE526I ACGT 7 cut(s) 256, 363, 425, 923, 1048, 1056, 1185
Hsp92II CATG 7 cut(s) 61, 76, 190, 395, 610, 739, 1130
HspAI GCGC 2 cut(s) 215, 358
Kpn2I TCCGGA 1 cut(s) 592
LmnI GCTCC 5 cut(s) 105, 110, 595, 772, 1210
Lsp1109I GCAGC 2 cut(s) 381, 743
LweI GCATC 1 cut(s) 1219
MaeI CTAG 5 cut(s) 279, 483, 720, 912, 1022
MaeII ACGT 7 cut(s) 256, 363, 425, 923, 1048, 1056, 1185
MaeIII GTNAC 2 cut(s) 533, 1186
MbiI CCGCTC 1 cut(s) 105
MboII GAAGA 7 cut(s) 124, 515, 649, 817, 988, 1231, 1334
MflI RGATCY 1 cut(s) 1098
MhlI GDGCHC 4 cut(s) 519, 561, 1062, 1181
MlsI TGGCCA 1 cut(s) 740
MluCI AATT 4 cut(s) 67, 742, 1258, 1364
MluNI TGGCCA 1 cut(s) 740
MlyI GAGTC 3 cut(s) 521, 541, 1358
Mox20I TGGCCA 1 cut(s) 740
MroI TCCGGA 1 cut(s) 592
MroXI GAANNNNTTC 1 cut(s) 647
MscI TGGCCA 1 cut(s) 740
MseI TTAA 1 cut(s) 498
MslI CAYNNNNRTG 5 cut(s) 390, 393, 396, 842, 1067
Msp20I TGGCCA 1 cut(s) 740
MspI CCGG 5 cut(s) 183, 540, 593, 883, 1043
MspR9I CCNGG 3 cut(s) 705, 884, 1044
Mva1269I GAATGC 2 cut(s) 50, 1122
MvaI CCWGG 1 cut(s) 705
MwoI GCNNNNNNNGC 8 cut(s) 355, 366, 375, 720, 737, 1086, 1202, 1238
NciI CCSGG 2 cut(s) 884, 1044
NcoI CCATGG 2 cut(s) 72, 735
NdeI CATATG 2 cut(s) 472, 1068
NlaIII CATG 7 cut(s) 61, 76, 190, 395, 610, 739, 1130
NlaIV GGNNCC 1 cut(s) 101
NmuCI GTSAC 2 cut(s) 533, 1186
PaeR7I CTCGAG 1 cut(s) 529
PagI TCATGA 1 cut(s) 1126
PcsI WCGNNNNNNNCGW 2 cut(s) 369, 873
PctI GAATGC 2 cut(s) 50, 1122
PdmI GAANNNNTTC 1 cut(s) 647
PkrI GCNGC 4 cut(s) 214, 371, 733, 1091
PleI GAGTC 3 cut(s) 521, 540, 1357
PpsI GAGTC 3 cut(s) 521, 540, 1357
Ppu21I YACGTR 1 cut(s) 364
PshAI GACNNNNGTC 1 cut(s) 531
Psp1406I AACGTT 1 cut(s) 425
Psp6I CCWGG 1 cut(s) 703
PspGI CCWGG 1 cut(s) 703
PspN4I GGNNCC 1 cut(s) 101
PspPI GGNCC 3 cut(s) 79, 698, 834
PspXI VCTCGAGB 1 cut(s) 529
PsuI RGATCY 1 cut(s) 1098
RsaI GTAC 1 cut(s) 686
RsaNI GTAC 1 cut(s) 685
RseI CAYNNNNRTG 5 cut(s) 390, 393, 396, 842, 1067
SalI GTCGAC 1 cut(s) 170
SaqAI TTAA 1 cut(s) 498
SatI GCNGC 4 cut(s) 213, 370, 732, 1090
Sau96I GGNCC 3 cut(s) 79, 698, 834
SchI GAGTC 3 cut(s) 521, 541, 1358
ScrFI CCNGG 3 cut(s) 705, 884, 1044
SduI GDGCHC 4 cut(s) 519, 561, 1062, 1181
SfaNI GCATC 1 cut(s) 1219
Sfr274I CTCGAG 1 cut(s) 529
SinI GGWCC 3 cut(s) 79, 698, 834
SlaI CTCGAG 1 cut(s) 529
SmiMI CAYNNNNRTG 5 cut(s) 390, 393, 396, 842, 1067
SmlI CTYRAG 6 cut(s) 350, 431, 518, 529, 554, 749
SmoI CTYRAG 6 cut(s) 350, 431, 518, 529, 554, 749
Sse9I AATT 4 cut(s) 67, 742, 1258, 1364
SsiI CCGC 9 cut(s) 30, 77, 103, 212, 701, 1089, 1152, 1196, 1205
SspMI CTAG 5 cut(s) 279, 483, 720, 912, 1022
StyD4I CCNGG 3 cut(s) 703, 882, 1042
StyI CCWWGG 5 cut(s) 72, 278, 735, 1117, 1296
TaaI ACNGT 1 cut(s) 797
TaiI ACGT 7 cut(s) 259, 366, 428, 926, 1051, 1059, 1188
TaqI TCGA 8 cut(s) 171, 336, 525, 530, 566, 615, 1109, 1281
TaqII GACCGA 1 cut(s) 822
TasI AATT 4 cut(s) 67, 742, 1258, 1364
TauI GCSGC 2 cut(s) 215, 1092
Tru1I TTAA 1 cut(s) 498
Tru9I TTAA 1 cut(s) 498
TscAI CASTG 2 cut(s) 101, 715
TseFI GTSAC 2 cut(s) 533, 1186
TseI GCWGC 2 cut(s) 369, 731
Tsp45I GTSAC 2 cut(s) 533, 1186
TspDTI ATGAA 6 cut(s) 203, 940, 1055, 1115, 1232, 1317
TspGWI ACGGA 1 cut(s) 109
TspRI CASTG 2 cut(s) 101, 715
VneI GTGCAC 1 cut(s) 1058
VpaK11BI GGWCC 3 cut(s) 79, 698, 834
XhoI CTCGAG 1 cut(s) 529
XmaJI CCTAGG 1 cut(s) 278
XmiI GTMKAC 3 cut(s) 171, 204, 222
XmnI GAANNNNTTC 1 cut(s) 647
XspI CTAG 5 cut(s) 279, 483, 720, 912, 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.