Rh2DG144300

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000471
Physical Location & Seq
Forward (+)
12163594 .. 12165425
1832 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG144300.1

Sequence Viewer

Length: 1500 bp
ATGACAATGTTTCCACTCAATTTTGAGAGTCTCAATCTCACAAACATGCCCACAACGGCATCGTCCTTGTTCTCAGCCTATGCCTCCCTCACCGCATTCATAATGTTGGTCCGTTCCATAGTTGATCAGCTGATCCCCCACGAGCTCCGCTACTACATCTACTCGGCCTTCGGCCGCCTCTTCACCCCTCGCCCCTCCGACCTCACTCTCATCGTCGATGAGTGCTGCGGCATGGTTCAAAACCAAATCTATGAGGCGGCGGAGGTCTACCTCCGGACCAAGGTCAGTCCCCTAAACGACCGTCTCCGGGTGAAAAAGGCACCTCGGCAGAAGAACATTACCGTCACGATTGAAAAGGGTGAAGAAATCAAAGACAGTTTCGACGGGATAAACATCAACTGGCGTTTTGTGTGCAGCGGAGGAGAGAATGAGCAGAATAGCCATGCGCAACAGAAGCGTCAGTTTGAGCTGACAGTGAATAAGAAACATCGAGTCAAAGTAATCGAGTCCTACTTGCCGTATGTGCTTGACAGGGCCGAGGCCATTAAGAATGAGGACAAGGTTGTGAAGCTCTATAGCCAAGAGGGGTCTTATGATCCGTATGATGATGAATCCAATTCGGACTGGAGTTCGATAAATCTGGATCATCCGGCTACCTTGGAGACACTTGCCGTGGATGCCGAGGTTAAGAGAACGATCATTGAGGATTTGGATAGGTTTTTGAGGAGGAGAGAGTTTTATAAGAAGGTTGGGAAGGCCTGGAAAAGAGGGTACCTGTTGTATGGTCCACCCGGGACTGGCAAATCCAGCTTGATTGCTGCCATGGCTAATTATCTCAAGTTTGATATATATGATGTGGAGCTTACTAGTATTAAAGACAACTCGGAGTTGAGGAGGACACTGCTGACTACGACAAACCGTTCTATCTTGGTCATTGAGGATATTGATTGCAGTGTGGAGGTGCAAAACCGGGAATGTGAGGTGGAAGATCATCAACCATCTAACACCAAGTTAACACTCTCCGGCCTACTGAACTTTATAGATGGTTTGTGGTCAAGCTGCGGAGATGAGAGAATCATTGTGTTCACCACCAACCACAAGCACAAGATAGACCCGGCATTGTTGCGTCCTGGTCGAATGGATGTGCACATTCACATGTCATATTGCACTCCAAGCGGGTTCAGGATCTTGGCCTCTAACTACCTTGGTATGCATGAAAGCAATCCTCATCGCCTATGCGGAGAAGTTGAGGAGTTAATCGAGAGCTCAAAGGTCACCCCCGCGGAGATTGCTGAGCAGCTCATGAAGAGTGAGGATGCTGATGTTGCTCTTGAACGACTTGTCGATTTCCTGAAAAGAAAGAAGGAAGAGAGCAATAAAATTGGGGATGAAGGGACTAGTAAATCCGAAATTCAAGAAACAGATCAAAACGCAGAAAAGTGGAGCTCAGTCAGTAGCGATGATGAACTTAAATCTTCTCTTTCAGATGCTCAAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

499

Amino Acids

56.88

Weight (kDa)

5.32

Isoelectric Point (pI)

49.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 45 - 138 5.5e-25 Domain associated at C-terminal with AAA
AAA PF00004 258 - 387 3.2e-20 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 389 - 459 7.1e-22 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18190 AT2G18193
fragaria_vesca FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 741
Acc16I TGCGCA 1 cut(s) 447
Acc65I GGTACC 1 cut(s) 771
AccB1I GGYRCC 2 cut(s) 319, 771
AccI GTMKAC 1 cut(s) 267
AccII CGCG 1 cut(s) 1283
AccIII TCCGGA 1 cut(s) 273
AclWI GGATC 4 cut(s) 127, 590, 651, 1193
AcoI YGGCCR 1 cut(s) 172
AcsI RAATTY 1 cut(s) 1410
AfaI GTAC 1 cut(s) 773
AfiI CCNNNNNNNGG 3 cut(s) 280, 307, 797
AflIII ACRYGT 1 cut(s) 1155
AgsI TTSAA 4 cut(s) 239, 353, 1334, 1415
AhlI ACTAGT 2 cut(s) 866, 1397
AjnI CCWGG 2 cut(s) 758, 1129
Alw21I GWGCWC 4 cut(s) 147, 1149, 1268, 1448
Alw26I GTCTC 3 cut(s) 35, 308, 656
Alw44I GTGCAC 1 cut(s) 1145
AlwI GGATC 4 cut(s) 127, 590, 651, 1193
Ama87I CYCGRG 1 cut(s) 791
Aor13HI TCCGGA 1 cut(s) 273
AoxI GGCC 7 cut(s) 165, 172, 534, 540, 756, 1024, 1191
ApaLI GTGCAC 1 cut(s) 1145
ApeKI GCWGC 5 cut(s) 225, 414, 818, 1059, 1297
ApoI RAATTY 1 cut(s) 1410
Asp718I GGTACC 1 cut(s) 771
AspLEI GCGC 1 cut(s) 448
AspS9I GGNCC 4 cut(s) 109, 276, 534, 785
AsuC2I CCSGG 5 cut(s) 308, 792, 793, 971, 1115
AsuHPI GGTGA 6 cut(s) 82, 175, 322, 371, 1078, 1267
AvaI CYCGRG 1 cut(s) 791
AvaII GGWCC 3 cut(s) 109, 276, 785
BaeGI GKGCMC 1 cut(s) 1149
BanI GGYRCC 2 cut(s) 319, 771
BanII GRGCYC 3 cut(s) 147, 1268, 1448
BauI CACGAG 1 cut(s) 140
Bbv12I GWGCWC 4 cut(s) 147, 1149, 1268, 1448
BbvI GCAGC 5 cut(s) 212, 426, 805, 1046, 1309
BccI CCATC 2 cut(s) 1006, 1037
BceAI ACGGC 3 cut(s) 72, 502, 656
BciT130I CCWGG 2 cut(s) 760, 1131
BclI TGATCA 1 cut(s) 124
BcnI CCSGG 5 cut(s) 308, 792, 793, 971, 1115
BcoDI GTCTC 3 cut(s) 35, 308, 656
BcuI ACTAGT 2 cut(s) 866, 1397
BfaI CTAG 2 cut(s) 867, 1398
BfmI CTRYAG 1 cut(s) 574
BisI GCNGC 8 cut(s) 175, 226, 229, 258, 415, 819, 1060, 1298
BlpI GCTNAGC 1 cut(s) 1293
BlsI GCNGC 8 cut(s) 176, 227, 230, 259, 416, 820, 1061, 1299
Bme1390I CCNGG 7 cut(s) 308, 760, 792, 793, 971, 1115, 1131
Bme18I GGWCC 3 cut(s) 109, 276, 785
BmeT110I CYCGRG 1 cut(s) 791
BmgT120I GGNCC 4 cut(s) 109, 276, 534, 785
BmiI GGNNCC 2 cut(s) 321, 773
BmrFI CCNGG 7 cut(s) 308, 760, 792, 793, 971, 1115, 1131
BmsI GCATC 4 cut(s) 68, 667, 1306, 1477
BoxI GACNNNNGTC 1 cut(s) 281
BpmI CTGGAG 1 cut(s) 646
Bpu1102I GCTNAGC 1 cut(s) 1293
BpuEI CTTGAG 2 cut(s) 821, 1476
BpuMI CCSGG 5 cut(s) 308, 792, 793, 971, 1115
BsaBI GATNNNNATC 1 cut(s) 392
BsaWI WCCGGW 1 cut(s) 273
Bsc4I CCNNNNNNNGG 3 cut(s) 280, 307, 797
Bse1I ACTGG 3 cut(s) 404, 629, 802
Bse8I GATNNNNATC 1 cut(s) 392
BseAI TCCGGA 1 cut(s) 273
BseBI CCWGG 2 cut(s) 760, 1131
BseGI GGATG 5 cut(s) 646, 682, 1147, 1321, 1393
BseJI GATNNNNATC 1 cut(s) 392
BseLI CCNNNNNNNGG 3 cut(s) 280, 307, 797
BseMII CTCAG 3 cut(s) 87, 1284, 1461
BseNI ACTGG 3 cut(s) 404, 629, 802
BseRI GAGGAG 5 cut(s) 435, 739, 742, 907, 1265
BseSI GKGCMC 1 cut(s) 1149
BseX3I CGGCCG 1 cut(s) 172
BseXI GCAGC 5 cut(s) 212, 426, 805, 1046, 1309
BsgI GTGCAG 1 cut(s) 433
Bsh1236I CGCG 1 cut(s) 1283
Bsh1285I CGRYCG 2 cut(s) 175, 301
BshFI GGCC 7 cut(s) 167, 174, 536, 542, 758, 1026, 1193
BshNI GGYRCC 2 cut(s) 319, 771
BsiEI CGRYCG 2 cut(s) 175, 301
BsiHKAI GWGCWC 4 cut(s) 147, 1149, 1268, 1448
BsiHKCI CYCGRG 1 cut(s) 791
BsiSI CCGG 7 cut(s) 274, 307, 650, 792, 970, 1023, 1115
BslFI GGGAC 3 cut(s) 273, 808, 1408
BslI CCNNNNNNNGG 3 cut(s) 280, 307, 797
BsmAI GTCTC 3 cut(s) 35, 308, 656
BsmBI CGTCTC 1 cut(s) 308
BsmFI GGGAC 3 cut(s) 273, 808, 1408
BsmI GAATGC 1 cut(s) 95
BsnI GGCC 7 cut(s) 167, 174, 536, 542, 758, 1026, 1193
BsoBI CYCGRG 1 cut(s) 791
Bsp1286I GDGCHC 4 cut(s) 147, 1149, 1268, 1448
Bsp13I TCCGGA 1 cut(s) 273
Bsp143I GATC 8 cut(s) 124, 132, 595, 643, 696, 988, 1185, 1423
Bsp1720I GCTNAGC 1 cut(s) 1293
Bsp19I CCATGG 1 cut(s) 822
BspANI GGCC 7 cut(s) 167, 174, 536, 542, 758, 1026, 1193
BspCNI CTCAG 3 cut(s) 86, 1285, 1460
BspEI TCCGGA 1 cut(s) 273
BspFNI CGCG 1 cut(s) 1283
BspHI TCATGA 1 cut(s) 1302
BspLI GGNNCC 2 cut(s) 321, 773
BspPI GGATC 4 cut(s) 127, 590, 651, 1193
BspT107I GGYRCC 2 cut(s) 319, 771
BsrI ACTGG 3 cut(s) 404, 629, 802
BssMI GATC 8 cut(s) 124, 132, 595, 643, 696, 988, 1185, 1423
BssSI CACGAG 1 cut(s) 140
BssT1I CCWWGG 4 cut(s) 279, 657, 822, 1204
Bst2BI CACGAG 1 cut(s) 140
Bst2UI CCWGG 2 cut(s) 760, 1131
Bst4CI ACNGT 5 cut(s) 302, 343, 377, 475, 920
Bst6I CTCTTC 3 cut(s) 185, 1301, 1362
BstDEI CTNAG 3 cut(s) 73, 1293, 1447
BstDSI CCRYGG 3 cut(s) 672, 822, 1281
BstEII GGTNACC 1 cut(s) 1273
BstF5I GGATG 5 cut(s) 646, 682, 1147, 1321, 1393
BstFNI CGCG 1 cut(s) 1283
BstHHI GCGC 1 cut(s) 448
BstKTI GATC 8 cut(s) 127, 135, 598, 646, 699, 991, 1188, 1426
BstMAI GTCTC 3 cut(s) 35, 308, 656
BstMBI GATC 8 cut(s) 124, 132, 595, 643, 696, 988, 1185, 1423
BstMCI CGRYCG 2 cut(s) 175, 301
BstMWI GCNNNNNNNGC 8 cut(s) 454, 523, 677, 807, 824, 1173, 1289, 1325
BstNI CCWGG 2 cut(s) 760, 1131
BstNSI RCATGY 2 cut(s) 49, 1159
BstPAI GACNNNNGTC 1 cut(s) 281
BstPI GGTNACC 1 cut(s) 1273
BstSCI CCNGG 7 cut(s) 306, 758, 790, 791, 969, 1113, 1129
BstSFI CTRYAG 1 cut(s) 574
BstSLI GKGCMC 1 cut(s) 1149
BstUI CGCG 1 cut(s) 1283
BstV1I GCAGC 5 cut(s) 212, 426, 805, 1046, 1309
BstX2I RGATCY 1 cut(s) 1185
BstYI RGATCY 1 cut(s) 1185
BstZI CGGCCG 1 cut(s) 172
BsuRI GGCC 7 cut(s) 167, 174, 536, 542, 758, 1026, 1193
BtgI CCRYGG 3 cut(s) 672, 822, 1281
BtgZI GCGATG 2 cut(s) 1214, 1473
BtsCI GGATG 5 cut(s) 646, 682, 1147, 1321, 1393
BtsI GCAGTG 2 cut(s) 899, 958
BtsIMutI CAGTG 3 cut(s) 480, 899, 958
CciI TCATGA 1 cut(s) 1302
CfoI GCGC 1 cut(s) 448
Cfr13I GGNCC 4 cut(s) 109, 276, 534, 785
Cfr42I CCGCGG 1 cut(s) 1284
Cfr9I CCCGGG 1 cut(s) 791
CseI GACGC 2 cut(s) 446, 1115
Csp6I GTAC 1 cut(s) 772
CviAII CATG 7 cut(s) 46, 232, 443, 823, 1156, 1214, 1303
CviQI GTAC 1 cut(s) 772
DdeI CTNAG 3 cut(s) 73, 1293, 1447
DpnI GATC 8 cut(s) 126, 134, 597, 645, 698, 990, 1187, 1425
DpnII GATC 8 cut(s) 124, 132, 595, 643, 696, 988, 1185, 1423
EaeI YGGCCR 1 cut(s) 172
EagI CGGCCG 1 cut(s) 172
Eam1104I CTCTTC 3 cut(s) 185, 1301, 1362
EarI CTCTTC 3 cut(s) 185, 1301, 1362
EciI GGCGGA 1 cut(s) 275
Ecl136II GAGCTC 3 cut(s) 145, 1266, 1446
EclXI CGGCCG 1 cut(s) 172
Eco130I CCWWGG 4 cut(s) 279, 657, 822, 1204
Eco147I AGGCCT 1 cut(s) 758
Eco24I GRGCYC 3 cut(s) 147, 1268, 1448
Eco47I GGWCC 3 cut(s) 109, 276, 785
Eco52I CGGCCG 1 cut(s) 172
Eco53kI GAGCTC 3 cut(s) 145, 1266, 1446
Eco88I CYCGRG 1 cut(s) 791
Eco91I GGTNACC 1 cut(s) 1273
EcoICRI GAGCTC 3 cut(s) 145, 1266, 1446
EcoO65I GGTNACC 1 cut(s) 1273
EcoRII CCWGG 2 cut(s) 758, 1129
EcoT14I CCWWGG 4 cut(s) 279, 657, 822, 1204
EcoT22I ATGCAT 1 cut(s) 1215
EcoT38I GRGCYC 3 cut(s) 147, 1268, 1448
ErhI CCWWGG 4 cut(s) 279, 657, 822, 1204
Esp3I CGTCTC 1 cut(s) 308
FaeI CATG 7 cut(s) 49, 235, 446, 826, 1159, 1217, 1306
FaqI GGGAC 3 cut(s) 273, 808, 1408
FatI CATG 7 cut(s) 45, 231, 442, 822, 1155, 1213, 1302
FauI CCCGC 2 cut(s) 1169, 1288
FbaI TGATCA 1 cut(s) 124
FblI GTMKAC 1 cut(s) 267
Fnu4HI GCNGC 8 cut(s) 175, 226, 229, 258, 415, 819, 1060, 1298
FokI GGATG 5 cut(s) 633, 689, 1154, 1328, 1400
FriOI GRGCYC 3 cut(s) 147, 1268, 1448
Fsp4HI GCNGC 8 cut(s) 175, 226, 229, 258, 415, 819, 1060, 1298
FspBI CTAG 2 cut(s) 867, 1398
FspI TGCGCA 1 cut(s) 447
GlaI GCGC 1 cut(s) 447
GluI GCNGC 8 cut(s) 175, 226, 229, 258, 415, 819, 1060, 1298
GsuI CTGGAG 1 cut(s) 646
HaeIII GGCC 7 cut(s) 167, 174, 536, 542, 758, 1026, 1193
HapII CCGG 7 cut(s) 274, 307, 650, 792, 970, 1023, 1115
HgaI GACGC 2 cut(s) 446, 1115
HhaI GCGC 1 cut(s) 448
Hin1II CATG 7 cut(s) 49, 235, 446, 826, 1159, 1217, 1306
Hin6I GCGC 1 cut(s) 446
HinP1I GCGC 1 cut(s) 446
HincII GTYRAC 1 cut(s) 1014
HindII GTYRAC 1 cut(s) 1014
HinfI GANTC 5 cut(s) 28, 492, 506, 611, 1074
HpaI GTTAAC 1 cut(s) 1014
HpaII CCGG 7 cut(s) 274, 307, 650, 792, 970, 1023, 1115
HphI GGTGA 6 cut(s) 82, 175, 322, 371, 1078, 1267
Hpy166II GTNNAC 5 cut(s) 268, 788, 1014, 1086, 1147
Hpy188I TCNGA 5 cut(s) 199, 622, 886, 1408, 1486
Hpy188III TCNNGA 9 cut(s) 274, 346, 641, 1183, 1261, 1303, 1331, 1351, 1415
Hpy8I GTNNAC 5 cut(s) 268, 788, 1014, 1086, 1147
Hpy99I CGWCG 2 cut(s) 218, 386
HpyAV CCTTC 5 cut(s) 178, 739, 748, 1357, 1385
HpyCH4III ACNGT 5 cut(s) 302, 343, 377, 475, 920
HpyCH4V TGCA 6 cut(s) 414, 951, 964, 1147, 1167, 1213
HpyF10VI GCNNNNNNNGC 8 cut(s) 454, 523, 677, 807, 824, 1173, 1289, 1325
HpyF3I CTNAG 3 cut(s) 73, 1293, 1447
Hsp92II CATG 7 cut(s) 49, 235, 446, 826, 1159, 1217, 1306
HspAI GCGC 1 cut(s) 446
Kpn2I TCCGGA 1 cut(s) 273
KpnI GGTACC 1 cut(s) 775
Ksp22I TGATCA 1 cut(s) 124
KspAI GTTAAC 1 cut(s) 1014
KspI CCGCGG 1 cut(s) 1284
Kzo9I GATC 8 cut(s) 124, 132, 595, 643, 696, 988, 1185, 1423
LmnI GCTCC 3 cut(s) 150, 859, 1443
Lsp1109I GCAGC 5 cut(s) 212, 426, 805, 1046, 1309
LweI GCATC 4 cut(s) 68, 667, 1306, 1477
MaeI CTAG 2 cut(s) 867, 1398
MaeIII GTNAC 2 cut(s) 343, 1273
MalI GATC 8 cut(s) 126, 134, 597, 645, 698, 990, 1187, 1425
MboI GATC 8 cut(s) 124, 132, 595, 643, 696, 988, 1185, 1423
MboII GAAGA 7 cut(s) 172, 343, 374, 998, 1318, 1379, 1467
MflI RGATCY 1 cut(s) 1185
MhlI GDGCHC 4 cut(s) 147, 1149, 1268, 1448
MluCI AATT 5 cut(s) 19, 616, 829, 1380, 1410
MlyI GAGTC 3 cut(s) 37, 501, 515
MmeI TCCRAC 1 cut(s) 222
Mph1103I ATGCAT 1 cut(s) 1215
MroI TCCGGA 1 cut(s) 273
MseI TTAA 6 cut(s) 546, 687, 873, 1013, 1256, 1470
MslI CAYNNNNRTG 2 cut(s) 44, 1154
MspA1I CMGCKG 3 cut(s) 130, 417, 1283
MspI CCGG 7 cut(s) 274, 307, 650, 792, 970, 1023, 1115
MspR9I CCNGG 7 cut(s) 308, 760, 792, 793, 971, 1115, 1131
Mva1269I GAATGC 1 cut(s) 95
MvaI CCWGG 2 cut(s) 760, 1131
MvnI CGCG 1 cut(s) 1283
MwoI GCNNNNNNNGC 8 cut(s) 454, 523, 677, 807, 824, 1173, 1289, 1325
NciI CCSGG 5 cut(s) 308, 792, 793, 971, 1115
NcoI CCATGG 1 cut(s) 822
NdeII GATC 8 cut(s) 124, 132, 595, 643, 696, 988, 1185, 1423
NlaIII CATG 7 cut(s) 49, 235, 446, 826, 1159, 1217, 1306
NlaIV GGNNCC 2 cut(s) 321, 773
NmeAIII GCCGAG 4 cut(s) 143, 304, 562, 706
NmuCI GTSAC 2 cut(s) 343, 1273
NsbI TGCGCA 1 cut(s) 447
NsiI ATGCAT 1 cut(s) 1215
NspI RCATGY 2 cut(s) 49, 1159
PagI TCATGA 1 cut(s) 1302
PceI AGGCCT 1 cut(s) 758
PciI ACATGT 1 cut(s) 1155
PctI GAATGC 1 cut(s) 95
PfeI GAWTC 2 cut(s) 611, 1074
PkrI GCNGC 8 cut(s) 176, 227, 230, 259, 416, 820, 1061, 1299
PleI GAGTC 3 cut(s) 36, 500, 514
PpsI GAGTC 3 cut(s) 36, 500, 514
PscI ACATGT 1 cut(s) 1155
PshAI GACNNNNGTC 1 cut(s) 281
PsiI TTATAA 1 cut(s) 741
Psp124BI GAGCTC 3 cut(s) 147, 1268, 1448
Psp6I CCWGG 2 cut(s) 758, 1129
PspEI GGTNACC 1 cut(s) 1273
PspGI CCWGG 2 cut(s) 758, 1129
PspN4I GGNNCC 2 cut(s) 321, 773
PspPI GGNCC 4 cut(s) 109, 276, 534, 785
PsuI RGATCY 1 cut(s) 1185
PvuII CAGCTG 1 cut(s) 130
RsaI GTAC 1 cut(s) 773
RsaNI GTAC 1 cut(s) 772
RseI CAYNNNNRTG 2 cut(s) 44, 1154
SacI GAGCTC 3 cut(s) 147, 1268, 1448
SacII CCGCGG 1 cut(s) 1284
SaqAI TTAA 6 cut(s) 546, 687, 873, 1013, 1256, 1470
SatI GCNGC 8 cut(s) 175, 226, 229, 258, 415, 819, 1060, 1298
Sau3AI GATC 8 cut(s) 124, 132, 595, 643, 696, 988, 1185, 1423
Sau96I GGNCC 4 cut(s) 109, 276, 534, 785
SchI GAGTC 3 cut(s) 37, 501, 515
ScrFI CCNGG 7 cut(s) 308, 760, 792, 793, 971, 1115, 1131
SduI GDGCHC 4 cut(s) 147, 1149, 1268, 1448
SfaNI GCATC 4 cut(s) 68, 667, 1306, 1477
SfcI CTRYAG 1 cut(s) 574
Sfr303I CCGCGG 1 cut(s) 1284
SgrBI CCGCGG 1 cut(s) 1284
SinI GGWCC 3 cut(s) 109, 276, 785
SmaI CCCGGG 1 cut(s) 793
SmiMI CAYNNNNRTG 2 cut(s) 44, 1154
SmlI CTYRAG 2 cut(s) 836, 1491
SmoI CTYRAG 2 cut(s) 836, 1491
SpeI ACTAGT 2 cut(s) 866, 1397
Sse9I AATT 5 cut(s) 19, 616, 829, 1380, 1410
SseBI AGGCCT 1 cut(s) 758
SspMI CTAG 2 cut(s) 867, 1398
SstI GAGCTC 3 cut(s) 147, 1268, 1448
StuI AGGCCT 1 cut(s) 758
StyD4I CCNGG 7 cut(s) 306, 758, 790, 791, 969, 1113, 1129
StyI CCWWGG 4 cut(s) 279, 657, 822, 1204
TaaI ACNGT 5 cut(s) 302, 343, 377, 475, 920
TaqI TCGA 8 cut(s) 216, 381, 490, 504, 632, 1135, 1260, 1344
TasI AATT 5 cut(s) 19, 616, 829, 1380, 1410
TauI GCSGC 3 cut(s) 177, 231, 260
TfiI GAWTC 2 cut(s) 611, 1074
Tru1I TTAA 6 cut(s) 546, 687, 873, 1013, 1256, 1470
Tru9I TTAA 6 cut(s) 546, 687, 873, 1013, 1256, 1470
TscAI CASTG 3 cut(s) 480, 906, 958
TseFI GTSAC 2 cut(s) 343, 1273
TseI GCWGC 5 cut(s) 225, 414, 818, 1059, 1297
Tsp45I GTSAC 2 cut(s) 343, 1273
TspDTI ATGAA 6 cut(s) 88, 624, 1230, 1319, 1404, 1479
TspGWI ACGGA 2 cut(s) 101, 588
TspMI CCCGGG 1 cut(s) 791
TspRI CASTG 3 cut(s) 480, 906, 958
VneI GTGCAC 1 cut(s) 1145
VpaK11BI GGWCC 3 cut(s) 109, 276, 785
XapI RAATTY 1 cut(s) 1410
XceI RCATGY 2 cut(s) 49, 1159
XmaI CCCGGG 1 cut(s) 791
XmiI GTMKAC 1 cut(s) 267
XspI CTAG 2 cut(s) 867, 1398
Zsp2I ATGCAT 1 cut(s) 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.