Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0000471

Physical Location & Seq

Genomic Coordinates Forward (+)

11819806 .. 11821317

Gene Structure 1512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1142200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGTTTTCTTCTCTCAATCTCAAAGAAATGCCAACAAACGCGTCCTCCTTGTTCTCAGCCTATGCCTCCTTCGCTGCATTCATGATGTTGGTCCGCACCGCGGCCAACGAACTCGTAAACCTTGTACCCGACAGGGTCCGCGCATACATAGAATCTGTCCTTCTCCGTCTATTCACCCCTCTCTCGGCTTCCCATGACCTAACTCTCGTCATTGATGAGAACGCTGGCATGACAAGAAACGAAGTCTACGAGGCCGCGGATGTCTACCTCCAAACCAAGATCGGTCCCTCAAACGAACGTCTTCGGGTCAGCAAAACACCTCGACAGAAAATCATCAGCCTCGCCATCGAAAAAGGCCAAGAAGTCATCGATACCTTCGATAACATTGTCCTAAAATGGCGTTACGTCTGCATTGAATCCGATAATAACTCTAGTCGTGATCAAAAGCGTCAATTCGAGCTAATATTCCACAAGAGGCACAAGGACAAAGTTGTCCTCTCCTACTTGCCTTACATGCTTGATCGAGCCAATGCAATTAAAGAACAAGACACAGTTGTGAAAATTTATACACGACATTCATATTCGTACTATAGTGATGATGACGATGGTGATTGGGGTTCGATAAGTCTGGAGCACCCGGCTACGTTTGAAACAATGGCGATGGACCCCGAGCTTAAGATGATGATTAAAAATGATTTGGACAGGTTTGTGAGGCGGAGGGAGTTCTATAAGAAGGTGGGGAAGGCTTGGAAAAGAGGCTACTTGTTGTACGGTCCTCCCGGCACCGGAAAATCTAGCTTGATCGCGGCCATGGCAAATTATCTCCATTTTAACATATATGATTTGGAGCTTTCTAGCATTAACGGCGACTCGGAATTGAAGGAGATATTGTTGTCCACTAAAAATCGTTCGATTTTAACAATTGAGGACATTGATTCCAGCATTGATGTCGAAAATCGTGAATCGGAGGAGGAGAAGCAACAGTCTTCTAAAACCAAATTGACGCTTTCGGGCCTATTGAACTTTATTGATGGTTTGTGGTCGAGCTGCGGTGACGAGAGAATTATTGTGTTCACAACCAACCACAAGGATCGGTTAGACCCTGCATTGTTGCGTCCGGGACGAATGGACGTGCACATTCACTTGTCTTACTGCACCGCAAGTGGATTCAAGGTCTTGGCGTCGAACTACCTTGGCATTGGTGACGAAAACCCTCATCGGCTCTGTGGGGAAATTGAAGGGTTGATAGAGAGCGCGGAGGTGACCCCTGCAGAGGTTGCTGAGCAGCTCATGACGAGCGAGGACGCTGATGTGGTGCTCAAAGGACTTGTCGATTTCCTCAAATGTAAGAAGGCCGAGAGGCAGCGAAAAAAGGAGGAAGAGAGTAACCAAATTAAAGATCGGGAAGCAGCAATGCAGAAAACGGATGGTGCTGACCATGTTGACGACGACGGCGAAGGGATCGTTGGATTCGAAAACTCTGAATCTGATGTAATGGCTTGCTTAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

504

Amino Acids

57.01

Weight (kDa)

5.17

Isoelectric Point (pI)

44.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	42 - 137	7.6e-22	Domain associated at C-terminal with AAA
AAA	PF00004	254 - 383	7.1e-22	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	385 - 458	3e-22	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18190 AT2G18193
fragaria_vesca	FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica	MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica	Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis	pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis	RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata	RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora	Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii	Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa	Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha	Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana	Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	491
AccB1I	GGYRCC	1 cut(s)	782
AccI	GTMKAC	2 cut(s)	246, 264
AccII	CGCG	6 cut(s)	41, 101, 141, 257, 806, 1256
AclWI	GGATC	2 cut(s)	1098, 1469
AcoI	YGGCCR	2 cut(s)	102, 807
AcsI	RAATTY	1 cut(s)	561
AcyI	GRCGYC	1 cut(s)	1181
AfaI	GTAC	3 cut(s)	126, 587, 770
AfiI	CCNNNNNNNGG	4 cut(s)	100, 184, 785, 1273
AflII	CTTAAG	1 cut(s)	674
AflIII	ACRYGT	1 cut(s)	39
AgsI	TTSAA	6 cut(s)	416, 650, 880, 1021, 1171, 1238
AjiI	CACGTC	1 cut(s)	1132
AjuI	GAANNNNNNNTTGG	2 cut(s)	1449, 1481
AleI	CACNNNNGTG	1 cut(s)	554
AluBI	AGCT	6 cut(s)	460, 673, 798, 850, 1047, 1288
AluI	AGCT	6 cut(s)	460, 673, 798, 850, 1047, 1288
Alw21I	GWGCWC	3 cut(s)	636, 1137, 1320
Alw44I	GTGCAC	1 cut(s)	1133
AlwI	GGATC	2 cut(s)	1098, 1469
Ama87I	CYCGRG	1 cut(s)	668
AoxI	GGCC	6 cut(s)	102, 252, 355, 807, 1012, 1353
ApaLI	GTGCAC	1 cut(s)	1133
ApeKI	GCWGC	5 cut(s)	74, 1047, 1285, 1363, 1409
ApoI	RAATTY	1 cut(s)	561
ArsI	GACNNNNNNTTYG	2 cut(s)	1314, 1346
Asp700I	GAANNNNTTC	1 cut(s)	300
AspLEI	GCGC	2 cut(s)	143, 1256
AspS9I	GGNCC	6 cut(s)	91, 136, 284, 664, 773, 1012
AsuC2I	CCSGG	3 cut(s)	638, 780, 1119
AsuHPI	GGTGA	5 cut(s)	166, 620, 1064, 1214, 1273
AsuII	TTCGAA	1 cut(s)	1473
AvaI	CYCGRG	1 cut(s)	668
AvaII	GGWCC	5 cut(s)	91, 136, 284, 664, 773
BaeGI	GKGCMC	1 cut(s)	1137
BanI	GGYRCC	1 cut(s)	782
BbsI	GAAGAC	2 cut(s)	293, 978
Bbv12I	GWGCWC	3 cut(s)	636, 1137, 1320
BbvI	GCAGC	5 cut(s)	61, 1034, 1297, 1375, 1421
BccI	CCATC	5 cut(s)	353, 599, 655, 1025, 1421
BceAI	ACGGC	2 cut(s)	880, 1468
BcgI	CGANNNNNNTGC	2 cut(s)	931, 965
BclI	TGATCA	1 cut(s)	439
BcnI	CCSGG	3 cut(s)	638, 780, 1119
BfaI	CTAG	3 cut(s)	432, 795, 855
BfmI	CTRYAG	2 cut(s)	589, 1269
BfrI	CTTAAG	1 cut(s)	674
BisI	GCNGC	8 cut(s)	75, 102, 255, 807, 1048, 1286, 1364, 1410
BlpI	GCTNAGC	1 cut(s)	1281
BlsI	GCNGC	8 cut(s)	76, 103, 256, 808, 1049, 1287, 1365, 1411
Bme1390I	CCNGG	3 cut(s)	638, 780, 1119
Bme18I	GGWCC	5 cut(s)	91, 136, 284, 664, 773
BmeT110I	CYCGRG	1 cut(s)	668
BmgBI	CACGTC	1 cut(s)	1132
BmgT120I	GGNCC	6 cut(s)	91, 136, 284, 664, 773, 1012
BmiI	GGNNCC	4 cut(s)	137, 286, 666, 784
BmrFI	CCNGG	3 cut(s)	638, 780, 1119
BpiI	GAAGAC	2 cut(s)	293, 978
BpmI	CTGGAG	1 cut(s)	650
Bpu1102I	GCTNAGC	1 cut(s)	1281
Bpu14I	TTCGAA	1 cut(s)	1473
BpuMI	CCSGG	3 cut(s)	638, 780, 1119
Bsa29I	ATCGAT	1 cut(s)	369
BsaHI	GRCGYC	1 cut(s)	1181
BsaJI	CCNNGG	4 cut(s)	99, 255, 810, 1192
BsaWI	WCCGGW	1 cut(s)	785
BsaXI	ACNNNNNCTCC	4 cut(s)	29, 59, 875, 905
Bsc4I	CCNNNNNNNGG	4 cut(s)	100, 184, 785, 1273
Bse3DI	GCAATG	1 cut(s)	1419
BseCI	ATCGAT	1 cut(s)	369
BseDI	CCNNGG	4 cut(s)	99, 255, 810, 1192
BseGI	GGATG	2 cut(s)	265, 1432
BseLI	CCNNNNNNNGG	4 cut(s)	100, 184, 785, 1273
BseMI	GCAATG	1 cut(s)	1419
BseMII	CTCAG	2 cut(s)	69, 1272
BseRI	GAGGAG	2 cut(s)	983, 986
BseSI	GKGCMC	1 cut(s)	1137
BseXI	GCAGC	5 cut(s)	61, 1034, 1297, 1375, 1421
BsgI	GTGCAG	1 cut(s)	1138
Bsh1236I	CGCG	6 cut(s)	41, 101, 141, 257, 806, 1256
BshFI	GGCC	6 cut(s)	104, 254, 357, 809, 1014, 1355
BshNI	GGYRCC	1 cut(s)	782
BshVI	ATCGAT	1 cut(s)	369
BsiHKAI	GWGCWC	3 cut(s)	636, 1137, 1320
BsiHKCI	CYCGRG	1 cut(s)	668
BsiSI	CCGG	4 cut(s)	638, 780, 786, 1118
BslFI	GGGAC	2 cut(s)	270, 1134
BslI	CCNNNNNNNGG	4 cut(s)	100, 184, 785, 1273
BsmFI	GGGAC	2 cut(s)	270, 1134
BsmI	GAATGC	1 cut(s)	77
BsnI	GGCC	6 cut(s)	104, 254, 357, 809, 1014, 1355
BsoBI	CYCGRG	1 cut(s)	668
Bsp119I	TTCGAA	1 cut(s)	1473
Bsp1286I	GDGCHC	3 cut(s)	636, 1137, 1320
Bsp143I	GATC	7 cut(s)	279, 439, 520, 801, 1090, 1399, 1461
Bsp1720I	GCTNAGC	1 cut(s)	1281
Bsp19I	CCATGG	1 cut(s)	810
BspANI	GGCC	6 cut(s)	104, 254, 357, 809, 1014, 1355
BspCNI	CTCAG	2 cut(s)	68, 1273
BspDI	ATCGAT	1 cut(s)	369
BspFNI	CGCG	6 cut(s)	41, 101, 141, 257, 806, 1256
BspHI	TCATGA	2 cut(s)	81, 1290
BspLI	GGNNCC	4 cut(s)	137, 286, 666, 784
BspMAI	CTGCAG	1 cut(s)	1273
BspPI	GGATC	2 cut(s)	1098, 1469
BspT104I	TTCGAA	1 cut(s)	1473
BspT107I	GGYRCC	1 cut(s)	782
BspTI	CTTAAG	1 cut(s)	674
BsrDI	GCAATG	1 cut(s)	1419
BssECI	CCNNGG	4 cut(s)	99, 255, 810, 1192
BssMI	GATC	7 cut(s)	279, 439, 520, 801, 1090, 1399, 1461
BssNI	GRCGYC	1 cut(s)	1181
BssT1I	CCWWGG	2 cut(s)	810, 1192
Bst4CI	ACNGT	3 cut(s)	553, 773, 984
Bst6I	CTCTTC	1 cut(s)	1374
BstACI	GRCGYC	1 cut(s)	1181
BstAFI	CTTAAG	1 cut(s)	674
BstAPI	GCANNNNNTGC	1 cut(s)	1277
BstBI	TTCGAA	1 cut(s)	1473
BstC8I	GCNNGC	2 cut(s)	226, 1501
BstDEI	CTNAG	2 cut(s)	55, 1281
BstDSI	CCRYGG	3 cut(s)	99, 255, 810
BstEII	GGTNACC	1 cut(s)	1261
BstF5I	GGATG	2 cut(s)	265, 1432
BstFNI	CGCG	6 cut(s)	41, 101, 141, 257, 806, 1256
BstHHI	GCGC	2 cut(s)	143, 1256
BstKTI	GATC	7 cut(s)	282, 442, 523, 804, 1093, 1402, 1464
BstMBI	GATC	7 cut(s)	279, 439, 520, 801, 1090, 1399, 1461
BstMWI	GCNNNNNNNGC	5 cut(s)	71, 514, 812, 864, 1277
BstNSI	RCATGY	1 cut(s)	517
BstPI	GGTNACC	1 cut(s)	1261
BstSCI	CCNGG	3 cut(s)	636, 778, 1117
BstSFI	CTRYAG	2 cut(s)	589, 1269
BstSLI	GKGCMC	1 cut(s)	1137
BstUI	CGCG	6 cut(s)	41, 101, 141, 257, 806, 1256
BstV1I	GCAGC	5 cut(s)	61, 1034, 1297, 1375, 1421
BstV2I	GAAGAC	2 cut(s)	293, 978
Bsu15I	ATCGAT	1 cut(s)	369
BsuRI	GGCC	6 cut(s)	104, 254, 357, 809, 1014, 1355
BsuTUI	ATCGAT	1 cut(s)	369
BtgI	CCRYGG	3 cut(s)	99, 255, 810
BtgZI	GCGATG	1 cut(s)	674
BtrI	CACGTC	1 cut(s)	1132
BtsCI	GGATG	2 cut(s)	265, 1432
Cac8I	GCNNGC	2 cut(s)	226, 1501
CciI	TCATGA	2 cut(s)	81, 1290
CfoI	GCGC	2 cut(s)	143, 1256
Cfr13I	GGNCC	6 cut(s)	91, 136, 284, 664, 773, 1012
Cfr42I	CCGCGG	2 cut(s)	102, 258
ClaI	ATCGAT	1 cut(s)	369
CseI	GACGC	6 cut(s)	30, 437, 1012, 1103, 1170, 1313
Csp6I	GTAC	3 cut(s)	125, 586, 769
CviAII	CATG	7 cut(s)	82, 194, 229, 514, 811, 1291, 1439
CviQI	GTAC	3 cut(s)	125, 586, 769
DdeI	CTNAG	2 cut(s)	55, 1281
DpnI	GATC	7 cut(s)	281, 441, 522, 803, 1092, 1401, 1463
DpnII	GATC	7 cut(s)	279, 439, 520, 801, 1090, 1399, 1461
DrdI	GACNNNNNNGTC	1 cut(s)	491
DseDI	GACNNNNNNGTC	1 cut(s)	491
EaeI	YGGCCR	2 cut(s)	102, 807
Eam1104I	CTCTTC	1 cut(s)	1374
EarI	CTCTTC	1 cut(s)	1374
EciI	GGCGGA	1 cut(s)	730
Eco130I	CCWWGG	2 cut(s)	810, 1192
Eco47I	GGWCC	5 cut(s)	91, 136, 284, 664, 773
Eco88I	CYCGRG	1 cut(s)	668
Eco91I	GGTNACC	1 cut(s)	1261
EcoO65I	GGTNACC	1 cut(s)	1261
EcoT14I	CCWWGG	2 cut(s)	810, 1192
ErhI	CCWWGG	2 cut(s)	810, 1192
FaeI	CATG	7 cut(s)	85, 197, 232, 517, 814, 1294, 1442
FaqI	GGGAC	2 cut(s)	270, 1134
FatI	CATG	7 cut(s)	81, 193, 228, 513, 810, 1290, 1438
FbaI	TGATCA	1 cut(s)	439
FblI	GTMKAC	2 cut(s)	246, 264
Fnu4HI	GCNGC	8 cut(s)	75, 102, 255, 807, 1048, 1286, 1364, 1410
FokI	GGATG	2 cut(s)	272, 1439
Fsp4HI	GCNGC	8 cut(s)	75, 102, 255, 807, 1048, 1286, 1364, 1410
FspBI	CTAG	3 cut(s)	432, 795, 855
GlaI	GCGC	2 cut(s)	142, 1255
GluI	GCNGC	8 cut(s)	75, 102, 255, 807, 1048, 1286, 1364, 1410
GsuI	CTGGAG	1 cut(s)	650
HaeIII	GGCC	6 cut(s)	104, 254, 357, 809, 1014, 1355
HapII	CCGG	4 cut(s)	638, 780, 786, 1118
HgaI	GACGC	6 cut(s)	30, 437, 1012, 1103, 1170, 1313
HhaI	GCGC	2 cut(s)	143, 1256
Hin1I	GRCGYC	1 cut(s)	1181
Hin1II	CATG	7 cut(s)	85, 197, 232, 517, 814, 1294, 1442
Hin6I	GCGC	2 cut(s)	141, 1254
HinP1I	GCGC	2 cut(s)	141, 1254
HincII	GTYRAC	1 cut(s)	1444
HindII	GTYRAC	1 cut(s)	1444
HinfI	GANTC	8 cut(s)	152, 416, 869, 935, 962, 1167, 1470, 1484
HpaII	CCGG	4 cut(s)	638, 780, 786, 1118
HphI	GGTGA	5 cut(s)	166, 620, 1064, 1214, 1273
Hpy166II	GTNNAC	7 cut(s)	118, 247, 265, 897, 1074, 1135, 1444
Hpy188I	TCNGA	5 cut(s)	421, 874, 967, 1483, 1489
Hpy188III	TCNNGA	6 cut(s)	82, 437, 629, 959, 1291, 1403
Hpy8I	GTNNAC	7 cut(s)	118, 247, 265, 897, 1074, 1135, 1444
Hpy99I	CGWCG	3 cut(s)	1186, 1451, 1454
HpyAV	CCTTC	9 cut(s)	79, 170, 385, 727, 736, 874, 1232, 1345, 1451
HpyCH4III	ACNGT	3 cut(s)	553, 773, 984
HpyCH4IV	ACGT	4 cut(s)	298, 405, 644, 1131
HpyCH4V	TGCA	8 cut(s)	77, 411, 533, 1106, 1135, 1155, 1271, 1417
HpyF10VI	GCNNNNNNNGC	5 cut(s)	71, 514, 812, 864, 1277
HpyF3I	CTNAG	2 cut(s)	55, 1281
HpySE526I	ACGT	4 cut(s)	298, 405, 644, 1131
Hsp92I	GRCGYC	1 cut(s)	1181
Hsp92II	CATG	7 cut(s)	85, 197, 232, 517, 814, 1294, 1442
HspAI	GCGC	2 cut(s)	141, 1254
Ksp22I	TGATCA	1 cut(s)	439
KspI	CCGCGG	2 cut(s)	102, 258
Kzo9I	GATC	7 cut(s)	279, 439, 520, 801, 1090, 1399, 1461
LmnI	GCTCC	2 cut(s)	631, 847
Lsp1109I	GCAGC	5 cut(s)	61, 1034, 1297, 1375, 1421
MaeI	CTAG	3 cut(s)	432, 795, 855
MaeII	ACGT	4 cut(s)	298, 405, 644, 1131
MaeIII	GTNAC	5 cut(s)	401, 1052, 1202, 1261, 1385
MalI	GATC	7 cut(s)	281, 441, 522, 803, 1092, 1401, 1463
MboI	GATC	7 cut(s)	279, 439, 520, 801, 1090, 1399, 1461
MboII	GAAGA	3 cut(s)	293, 978, 1391
MfeI	CAATTG	1 cut(s)	921
MhlI	GDGCHC	3 cut(s)	636, 1137, 1320
MluI	ACGCGT	1 cut(s)	39
MlyI	GAGTC	1 cut(s)	863
MmeI	TCCRAC	1 cut(s)	1447
MroXI	GAANNNNTTC	1 cut(s)	300
MseI	TTAA	8 cut(s)	537, 675, 687, 831, 861, 917, 1395, 1505
MslI	CAYNNNNRTG	1 cut(s)	554
MspA1I	CMGCKG	2 cut(s)	101, 257
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	4 cut(s)	638, 780, 786, 1118
MspR9I	CCNGG	3 cut(s)	638, 780, 1119
MunI	CAATTG	1 cut(s)	921
Mva1269I	GAATGC	1 cut(s)	77
MvnI	CGCG	6 cut(s)	41, 101, 141, 257, 806, 1256
MwoI	GCNNNNNNNGC	5 cut(s)	71, 514, 812, 864, 1277
NciI	CCSGG	3 cut(s)	638, 780, 1119
NcoI	CCATGG	1 cut(s)	810
NdeII	GATC	7 cut(s)	279, 439, 520, 801, 1090, 1399, 1461
NlaIII	CATG	7 cut(s)	85, 197, 232, 517, 814, 1294, 1442
NlaIV	GGNNCC	4 cut(s)	137, 286, 666, 784
NmeAIII	GCCGAG	2 cut(s)	164, 1381
NmuCI	GTSAC	3 cut(s)	1052, 1202, 1261
NspI	RCATGY	1 cut(s)	517
NspV	TTCGAA	1 cut(s)	1473
OliI	CACNNNNGTG	1 cut(s)	554
PagI	TCATGA	2 cut(s)	81, 1290
PcsI	WCGNNNNNNNCGW	4 cut(s)	246, 375, 1452, 1470
PctI	GAATGC	1 cut(s)	77
PdmI	GAANNNNTTC	1 cut(s)	300
PfeI	GAWTC	7 cut(s)	152, 416, 935, 962, 1167, 1470, 1484
PflFI	GACNNNGTC	1 cut(s)	134
PfoI	TCCNGGA	1 cut(s)	1117
PkrI	GCNGC	8 cut(s)	76, 103, 256, 808, 1049, 1287, 1365, 1411
PleI	GAGTC	1 cut(s)	863
PpsI	GAGTC	1 cut(s)	863
PspEI	GGTNACC	1 cut(s)	1261
PspN4I	GGNNCC	4 cut(s)	137, 286, 666, 784
PspPI	GGNCC	6 cut(s)	91, 136, 284, 664, 773, 1012
PstI	CTGCAG	1 cut(s)	1273
PsyI	GACNNNGTC	1 cut(s)	134
RsaI	GTAC	3 cut(s)	126, 587, 770
RsaNI	GTAC	3 cut(s)	125, 586, 769
RseI	CAYNNNNRTG	1 cut(s)	554
SacII	CCGCGG	2 cut(s)	102, 258
SaqAI	TTAA	8 cut(s)	537, 675, 687, 831, 861, 917, 1395, 1505
SatI	GCNGC	8 cut(s)	75, 102, 255, 807, 1048, 1286, 1364, 1410
Sau3AI	GATC	7 cut(s)	279, 439, 520, 801, 1090, 1399, 1461
Sau96I	GGNCC	6 cut(s)	91, 136, 284, 664, 773, 1012
SchI	GAGTC	1 cut(s)	863
ScrFI	CCNGG	3 cut(s)	638, 780, 1119
SduI	GDGCHC	3 cut(s)	636, 1137, 1320
SfcI	CTRYAG	2 cut(s)	589, 1269
Sfr303I	CCGCGG	2 cut(s)	102, 258
SfuI	TTCGAA	1 cut(s)	1473
SgrBI	CCGCGG	2 cut(s)	102, 258
SinI	GGWCC	5 cut(s)	91, 136, 284, 664, 773
SmiMI	CAYNNNNRTG	1 cut(s)	554
SmlI	CTYRAG	1 cut(s)	674
SmoI	CTYRAG	1 cut(s)	674
SspI	AATATT	1 cut(s)	465
SspMI	CTAG	3 cut(s)	432, 795, 855
StyD4I	CCNGG	3 cut(s)	636, 778, 1117
StyI	CCWWGG	2 cut(s)	810, 1192
TaaI	ACNGT	3 cut(s)	553, 773, 984
TaiI	ACGT	4 cut(s)	301, 408, 647, 1134
TaqII	GACCGA	1 cut(s)	272
TauI	GCSGC	3 cut(s)	104, 257, 809
TfiI	GAWTC	7 cut(s)	152, 416, 935, 962, 1167, 1470, 1484
Tru1I	TTAA	8 cut(s)	537, 675, 687, 831, 861, 917, 1395, 1505
Tru9I	TTAA	8 cut(s)	537, 675, 687, 831, 861, 917, 1395, 1505
TseFI	GTSAC	3 cut(s)	1052, 1202, 1261
TseI	GCWGC	5 cut(s)	74, 1047, 1285, 1363, 1409
Tsp45I	GTSAC	3 cut(s)	1052, 1202, 1261
TspDTI	ATGAA	2 cut(s)	70, 567
TspGWI	ACGGA	2 cut(s)	155, 1439
Tth111I	GACNNNGTC	1 cut(s)	134
Vha464I	CTTAAG	1 cut(s)	674
VneI	GTGCAC	1 cut(s)	1133
VpaK11BI	GGWCC	5 cut(s)	91, 136, 284, 664, 773
XapI	RAATTY	1 cut(s)	561
XceI	RCATGY	1 cut(s)	517
XmiI	GTMKAC	2 cut(s)	246, 264
XmnI	GAANNNNTTC	1 cut(s)	300
XspI	CTAG	3 cut(s)	432, 795, 855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.