Rroxscaffold_2G00141960

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000471
Physical Location & Seq
Reverse (-)
80148595 .. 80150472
1878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00141960.1

Sequence Viewer

Length: 1413 bp
ATGTATCCTTTCGATTTCAAAGACATGCCCACCACGGCTTCGTCCTTGTTCTCGGCCTATGCCTCAATGGCGGCATTCATCATGTTGGTCCGCTCCATGGTGGACCAACTCCTTCCTCCTGAGTTGCGTTCATATATTTACTCATTTATTCACCAATTCTTCTACACCCCTCGATCGTTGGACATGACAATCATTATTGATGAGAAGTGTGGCTACGTCAACAACCAAGTTTATGAAGCAGCGGAAGTCTACCTCCAGACCAAGATTAGTGATTCGAATGAGCGTCTCCGAGTGACCAAAACACCAGGGCAGAAGAGTCTCAACATTGCCGTTGACAAAGACCAAGAAATCATTGATTTCTTCGATGGCGTTAAGCTTCGGTGGCATTTTGTGTGCGCTGAAGACAAGAATAGTCGTTCTGGTGGTGATGATGAAAAGCGTAAGTTTGAGCTGATTTTTCCCAAGAAGCACAGGACCAAGGTGATAGACTCGTACCTGTCACATGTGTTGGCTCGGGCTAATGCAATTAGAGAAGAAGGAAAGGTTCTTAAGCTTGATTCCCAGCTGACCCAGCATTCGGGTTCAGTAGATCTGGAGCACCCATCAACTTTCGACACATTGGCTATGGACCCCGAGCTTAAGAGGACGATTATCGAGGATTTGGATAGGTTTGTGAGGAGGAAGGACTTCTATAGGAAGGTTGGCAAGGCTTGGAAAAGAGGGTATTTGTTGTATGGTCCACCTGGTACTGGCAAATCAAGCTTGATTGCAGCCATGGCTAATTATCTCAAGTTTGATGTGTATGATTTGGAGCTTACTAGTGTTTATAACAACTCGGAATTGAGGAGGATAATGCTGTCTACCTCAAATCGTTCTATTTTGGTCATTGAGGATATTGATTGCACTGTGGACATACAAAATAGGGAATCTGAGGAGGATAATAATGAACAATCTAGCACCAGGGTAACACTCTCAGGCCTATTGAACTTCATAGATGGTCTGTGGTCGAGCTGTGGTGACGAGAGAATTATAGTGTTCACCACCAACAAGAAGGATAAATTAGACCCTGCATTGCTGCGTCCTGGTCGAATGGACGTGCACATTCACATGTCGTATTGCACCCCGAGCGGGTTCAGGGTCTTAGCCTCTAACTACCTTGGAATTCATGAAAGTAACCCTCATCGTCTTTGTGGAGAAATTGAAGGTTTGATAGAAAGCACTGAAGTTACCCCTGCAGAAATTGCTGAGGAGCTTATGAAGAGTGATGATGTTGATGTTGCTCTTGAAGGACTCGTCAATTTCCTCAAAAGAAAGAAATCCGAGAGGAGTAAAATAAACGATGAGGGGAGTCAGGGGACTAACAACATTGAAATTGAAGAAACAAACGAAGATGCAGAGAGAAAACAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

470

Amino Acids

53.68

Weight (kDa)

5.36

Isoelectric Point (pI)

52.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 38 - 132 1.3e-24 Domain associated at C-terminal with AAA
AAA PF00004 242 - 371 5.9e-22 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 373 - 442 1.9e-22 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18190 AT2G18193
fragaria_vesca FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 828
AccBSI CCGCTC 2 cut(s) 93, 1128
AccI GTMKAC 2 cut(s) 249, 860
AciI CCGC 4 cut(s) 71, 91, 242, 1128
AcsI RAATTY 1 cut(s) 1161
AcuI CTGAAG 2 cut(s) 420, 1242
AfaI GTAC 2 cut(s) 494, 748
AfiI CCNNNNNNNGG 4 cut(s) 97, 577, 749, 1128
AflII CTTAAG 2 cut(s) 548, 638
AflIII ACRYGT 2 cut(s) 502, 1107
AgsI TTSAA 6 cut(s) 19, 985, 1202, 1286, 1370, 1376
AhlI ACTAGT 1 cut(s) 818
AjiI CACGTC 1 cut(s) 1096
AjnI CCWGG 4 cut(s) 304, 742, 959, 1081
AluBI AGCT 9 cut(s) 376, 451, 553, 565, 637, 762, 814, 1011, 1252
AluI AGCT 9 cut(s) 376, 451, 553, 565, 637, 762, 814, 1011, 1252
Alw21I GWGCWC 2 cut(s) 600, 1101
Alw26I GTCTC 2 cut(s) 290, 323
Alw44I GTGCAC 1 cut(s) 1097
Ama87I CYCGRG 3 cut(s) 513, 632, 1123
AoxI GGCC 2 cut(s) 54, 976
ApaLI GTGCAC 1 cut(s) 1097
ApeKI GCWGC 3 cut(s) 239, 770, 1075
ApoI RAATTY 1 cut(s) 1161
ArsI GACNNNNNNTTYG 2 cut(s) 559, 591
Asp700I GAANNNNTTC 1 cut(s) 686
AspLEI GCGC 1 cut(s) 398
AspS9I GGNCC 5 cut(s) 88, 103, 474, 628, 737
AsuHPI GGTGA 5 cut(s) 143, 437, 493, 1028, 1030
AsuII TTCGAA 1 cut(s) 275
AvaI CYCGRG 3 cut(s) 513, 632, 1123
AvaII GGWCC 5 cut(s) 88, 103, 474, 628, 737
BaeGI GKGCMC 1 cut(s) 1101
BarI GAAGNNNNNNTAC 2 cut(s) 197, 229
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 2 cut(s) 600, 1101
BbvCI CCTCAGC 1 cut(s) 1245
BbvI GCAGC 3 cut(s) 251, 782, 1062
BccI CCATC 3 cut(s) 359, 610, 989
BceAI ACGGC 2 cut(s) 51, 314
BciT130I CCWGG 4 cut(s) 306, 744, 961, 1083
BciVI GTATCC 1 cut(s) 15
BcoDI GTCTC 2 cut(s) 290, 323
BcuI ACTAGT 1 cut(s) 818
BfaI CTAG 2 cut(s) 819, 954
BfmI CTRYAG 2 cut(s) 691, 1233
BfrI CTTAAG 2 cut(s) 548, 638
BfuI GTATCC 1 cut(s) 15
BglI GCCNNNNNGGC 1 cut(s) 68
BglII AGATCT 1 cut(s) 589
BisI GCNGC 4 cut(s) 72, 240, 771, 1076
BlsI GCNGC 4 cut(s) 73, 241, 772, 1077
Bme1390I CCNGG 4 cut(s) 306, 744, 961, 1083
Bme18I GGWCC 5 cut(s) 88, 103, 474, 628, 737
BmeT110I CYCGRG 3 cut(s) 513, 632, 1123
BmgBI CACGTC 1 cut(s) 1096
BmgT120I GGNCC 5 cut(s) 88, 103, 474, 628, 737
BmiI GGNNCC 1 cut(s) 630
BmrFI CCNGG 4 cut(s) 306, 744, 961, 1083
BmsI GCATC 1 cut(s) 1381
BpiI GAAGAC 1 cut(s) 408
BpmI CTGGAG 2 cut(s) 239, 614
Bpu10I CCTNAGC 1 cut(s) 1245
Bpu14I TTCGAA 1 cut(s) 275
BpuEI CTTGAG 1 cut(s) 773
BsaJI CCNNGG 7 cut(s) 33, 96, 305, 477, 774, 960, 1156
Bsc4I CCNNNNNNNGG 4 cut(s) 97, 577, 749, 1128
Bse1I ACTGG 1 cut(s) 754
Bse3DI GCAATG 2 cut(s) 324, 1070
BseBI CCWGG 4 cut(s) 306, 744, 961, 1083
BseDI CCNNGG 7 cut(s) 33, 96, 305, 477, 774, 960, 1156
BseLI CCNNNNNNNGG 4 cut(s) 97, 577, 749, 1128
BseMI GCAATG 2 cut(s) 324, 1070
BseMII CTCAG 4 cut(s) 111, 921, 987, 1236
BseNI ACTGG 1 cut(s) 754
BseRI GAGGAG 5 cut(s) 691, 859, 947, 1262, 1339
BseSI GKGCMC 1 cut(s) 1101
BseXI GCAGC 3 cut(s) 251, 782, 1062
BseYI CCCAGC 2 cut(s) 561, 570
Bsh1285I CGRYCG 1 cut(s) 176
BshFI GGCC 2 cut(s) 56, 978
BsiEI CGRYCG 1 cut(s) 176
BsiHKAI GWGCWC 2 cut(s) 600, 1101
BsiHKCI CYCGRG 3 cut(s) 513, 632, 1123
BslFI GGGAC 1 cut(s) 1369
BslI CCNNNNNNNGG 4 cut(s) 97, 577, 749, 1128
BsmAI GTCTC 2 cut(s) 290, 323
BsmBI CGTCTC 1 cut(s) 290
BsmFI GGGAC 1 cut(s) 1369
BsmI GAATGC 2 cut(s) 74, 574
BsnI GGCC 2 cut(s) 56, 978
BsoBI CYCGRG 3 cut(s) 513, 632, 1123
Bsp119I TTCGAA 1 cut(s) 275
Bsp1286I GDGCHC 2 cut(s) 600, 1101
Bsp143I GATC 2 cut(s) 173, 589
Bsp19I CCATGG 2 cut(s) 96, 774
BspACI CCGC 4 cut(s) 71, 91, 242, 1128
BspANI GGCC 2 cut(s) 56, 978
BspCNI CTCAG 4 cut(s) 112, 922, 986, 1237
BspHI TCATGA 1 cut(s) 1165
BspLI GGNNCC 1 cut(s) 630
BspMAI CTGCAG 1 cut(s) 1237
BspT104I TTCGAA 1 cut(s) 275
BspTI CTTAAG 2 cut(s) 548, 638
BsrBI CCGCTC 2 cut(s) 93, 1128
BsrDI GCAATG 2 cut(s) 324, 1070
BsrI ACTGG 1 cut(s) 754
BssECI CCNNGG 7 cut(s) 33, 96, 305, 477, 774, 960, 1156
BssMI GATC 2 cut(s) 173, 589
BssT1I CCWWGG 4 cut(s) 96, 477, 774, 1156
Bst2UI CCWGG 4 cut(s) 306, 744, 961, 1083
Bst4CI ACNGT 1 cut(s) 907
Bst6I CTCTTC 2 cut(s) 308, 1253
BstAFI CTTAAG 2 cut(s) 548, 638
BstAPI GCANNNNNTGC 1 cut(s) 1241
BstBI TTCGAA 1 cut(s) 275
BstDEI CTNAG 5 cut(s) 120, 930, 973, 1141, 1245
BstDSI CCRYGG 3 cut(s) 33, 96, 774
BstHHI GCGC 1 cut(s) 398
BstKTI GATC 2 cut(s) 176, 592
BstMAI GTCTC 2 cut(s) 290, 323
BstMBI GATC 2 cut(s) 173, 589
BstMCI CGRYCG 1 cut(s) 176
BstMWI GCNNNNNNNGC 7 cut(s) 68, 382, 571, 759, 776, 1125, 1241
BstNI CCWGG 4 cut(s) 306, 744, 961, 1083
BstNSI RCATGY 3 cut(s) 28, 506, 1111
BstSCI CCNGG 4 cut(s) 304, 742, 959, 1081
BstSFI CTRYAG 2 cut(s) 691, 1233
BstSLI GKGCMC 1 cut(s) 1101
BstV1I GCAGC 3 cut(s) 251, 782, 1062
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 1 cut(s) 589
BstYI RGATCY 1 cut(s) 589
BsuI GTATCC 1 cut(s) 15
BsuRI GGCC 2 cut(s) 56, 978
BtgI CCRYGG 3 cut(s) 33, 96, 774
BtrI CACGTC 1 cut(s) 1096
BtsIMutI CAGTG 2 cut(s) 903, 1218
CciI TCATGA 1 cut(s) 1165
CfoI GCGC 1 cut(s) 398
Cfr13I GGNCC 5 cut(s) 88, 103, 474, 628, 737
CseI GACGC 2 cut(s) 272, 1067
CsiI ACCWGGT 1 cut(s) 742
Csp6I GTAC 2 cut(s) 493, 747
CviAII CATG 8 cut(s) 25, 82, 97, 184, 503, 775, 1108, 1166
CviQI GTAC 2 cut(s) 493, 747
DdeI CTNAG 5 cut(s) 120, 930, 973, 1141, 1245
DpnI GATC 2 cut(s) 175, 591
DpnII GATC 2 cut(s) 173, 589
Eam1104I CTCTTC 2 cut(s) 308, 1253
EarI CTCTTC 2 cut(s) 308, 1253
Eco130I CCWWGG 4 cut(s) 96, 477, 774, 1156
Eco147I AGGCCT 1 cut(s) 978
Eco47I GGWCC 5 cut(s) 88, 103, 474, 628, 737
Eco57I CTGAAG 2 cut(s) 420, 1242
Eco88I CYCGRG 3 cut(s) 513, 632, 1123
EcoRI GAATTC 1 cut(s) 1161
EcoRII CCWGG 4 cut(s) 304, 742, 959, 1081
EcoT14I CCWWGG 4 cut(s) 96, 477, 774, 1156
ErhI CCWWGG 4 cut(s) 96, 477, 774, 1156
Esp3I CGTCTC 1 cut(s) 290
FaeI CATG 8 cut(s) 28, 85, 100, 187, 506, 778, 1111, 1169
FaqI GGGAC 1 cut(s) 1369
FatI CATG 8 cut(s) 24, 81, 96, 183, 502, 774, 1107, 1165
FauI CCCGC 1 cut(s) 1121
FblI GTMKAC 2 cut(s) 249, 860
Fnu4HI GCNGC 4 cut(s) 72, 240, 771, 1076
Fsp4HI GCNGC 4 cut(s) 72, 240, 771, 1076
FspBI CTAG 2 cut(s) 819, 954
GlaI GCGC 1 cut(s) 397
GluI GCNGC 4 cut(s) 72, 240, 771, 1076
GsaI CCCAGC 2 cut(s) 565, 574
GsuI CTGGAG 2 cut(s) 239, 614
HaeIII GGCC 2 cut(s) 56, 978
HgaI GACGC 2 cut(s) 272, 1067
HhaI GCGC 1 cut(s) 398
Hin1II CATG 8 cut(s) 28, 85, 100, 187, 506, 778, 1111, 1169
Hin6I GCGC 1 cut(s) 396
HinP1I GCGC 1 cut(s) 396
HincII GTYRAC 2 cut(s) 220, 334
HindII GTYRAC 2 cut(s) 220, 334
HindIII AAGCTT 3 cut(s) 374, 551, 760
HinfI GANTC 7 cut(s) 272, 316, 488, 557, 926, 1290, 1348
HphI GGTGA 5 cut(s) 143, 437, 493, 1028, 1030
Hpy166II GTNNAC 9 cut(s) 103, 220, 250, 334, 740, 861, 910, 1038, 1099
Hpy188I TCNGA 4 cut(s) 290, 838, 931, 1321
Hpy188III TCNNGA 5 cut(s) 119, 256, 593, 1166, 1283
Hpy8I GTNNAC 9 cut(s) 103, 220, 250, 334, 740, 861, 910, 1038, 1099
HpyAV CCTTC 7 cut(s) 122, 530, 676, 691, 1045, 1196, 1280
HpyCH4III ACNGT 1 cut(s) 907
HpyCH4IV ACGT 2 cut(s) 216, 1095
HpyCH4V TGCA 8 cut(s) 524, 770, 903, 1070, 1099, 1119, 1235, 1394
HpyF10VI GCNNNNNNNGC 7 cut(s) 68, 382, 571, 759, 776, 1125, 1241
HpyF3I CTNAG 5 cut(s) 120, 930, 973, 1141, 1245
HpySE526I ACGT 2 cut(s) 216, 1095
Hsp92II CATG 8 cut(s) 28, 85, 100, 187, 506, 778, 1111, 1169
HspAI GCGC 1 cut(s) 396
Kzo9I GATC 2 cut(s) 173, 589
LmnI GCTCC 4 cut(s) 98, 595, 811, 1249
Lsp1109I GCAGC 3 cut(s) 251, 782, 1062
LweI GCATC 1 cut(s) 1381
MabI ACCWGGT 1 cut(s) 742
MaeI CTAG 2 cut(s) 819, 954
MaeII ACGT 2 cut(s) 216, 1095
MaeIII GTNAC 6 cut(s) 292, 498, 964, 1016, 1172, 1225
MalI GATC 2 cut(s) 175, 591
MbiI CCGCTC 2 cut(s) 93, 1128
MboI GATC 2 cut(s) 173, 589
MboII GAAGA 8 cut(s) 151, 325, 352, 413, 545, 1270, 1388, 1400
MflI RGATCY 1 cut(s) 589
MhlI GDGCHC 2 cut(s) 600, 1101
MlyI GAGTC 4 cut(s) 325, 482, 1284, 1357
MmeI TCCRAC 1 cut(s) 159
MroXI GAANNNNTTC 1 cut(s) 686
MseI TTAA 3 cut(s) 372, 549, 639
MslI CAYNNNNRTG 1 cut(s) 1106
MspA1I CMGCKG 2 cut(s) 242, 565
MspCI CTTAAG 2 cut(s) 548, 638
MspR9I CCNGG 4 cut(s) 306, 744, 961, 1083
Mva1269I GAATGC 2 cut(s) 74, 574
MvaI CCWGG 4 cut(s) 306, 744, 961, 1083
MwoI GCNNNNNNNGC 7 cut(s) 68, 382, 571, 759, 776, 1125, 1241
NcoI CCATGG 2 cut(s) 96, 774
NdeII GATC 2 cut(s) 173, 589
NlaIII CATG 8 cut(s) 28, 85, 100, 187, 506, 778, 1111, 1169
NlaIV GGNNCC 1 cut(s) 630
NmeAIII GCCGAG 1 cut(s) 32
NmuCI GTSAC 3 cut(s) 292, 498, 1016
NspI RCATGY 3 cut(s) 28, 506, 1111
NspV TTCGAA 1 cut(s) 275
PagI TCATGA 1 cut(s) 1165
PceI AGGCCT 1 cut(s) 978
PciI ACATGT 2 cut(s) 502, 1107
PctI GAATGC 2 cut(s) 74, 574
PdmI GAANNNNTTC 1 cut(s) 686
PfeI GAWTC 3 cut(s) 272, 557, 926
PkrI GCNGC 4 cut(s) 73, 241, 772, 1077
Ple19I CGATCG 1 cut(s) 176
PleI GAGTC 4 cut(s) 324, 482, 1284, 1356
PpsI GAGTC 4 cut(s) 324, 482, 1284, 1356
PscI ACATGT 2 cut(s) 502, 1107
PsiI TTATAA 1 cut(s) 828
Psp6I CCWGG 4 cut(s) 304, 742, 959, 1081
PspFI CCCAGC 2 cut(s) 561, 570
PspGI CCWGG 4 cut(s) 304, 742, 959, 1081
PspN4I GGNNCC 1 cut(s) 630
PspPI GGNCC 5 cut(s) 88, 103, 474, 628, 737
PstI CTGCAG 1 cut(s) 1237
PsuI RGATCY 1 cut(s) 589
PvuI CGATCG 1 cut(s) 176
PvuII CAGCTG 1 cut(s) 565
RsaI GTAC 2 cut(s) 494, 748
RsaNI GTAC 2 cut(s) 493, 747
RseI CAYNNNNRTG 1 cut(s) 1106
SaqAI TTAA 3 cut(s) 372, 549, 639
SatI GCNGC 4 cut(s) 72, 240, 771, 1076
Sau3AI GATC 2 cut(s) 173, 589
Sau96I GGNCC 5 cut(s) 88, 103, 474, 628, 737
SchI GAGTC 4 cut(s) 325, 482, 1284, 1357
ScrFI CCNGG 4 cut(s) 306, 744, 961, 1083
SduI GDGCHC 2 cut(s) 600, 1101
SexAI ACCWGGT 1 cut(s) 742
SfaNI GCATC 1 cut(s) 1381
SfcI CTRYAG 2 cut(s) 691, 1233
SfuI TTCGAA 1 cut(s) 275
SinI GGWCC 5 cut(s) 88, 103, 474, 628, 737
SmiMI CAYNNNNRTG 1 cut(s) 1106
SmlI CTYRAG 3 cut(s) 548, 638, 788
SmoI CTYRAG 3 cut(s) 548, 638, 788
SpeI ACTAGT 1 cut(s) 818
SseBI AGGCCT 1 cut(s) 978
SsiI CCGC 4 cut(s) 71, 91, 242, 1128
SspMI CTAG 2 cut(s) 819, 954
StuI AGGCCT 1 cut(s) 978
StyD4I CCNGG 4 cut(s) 304, 742, 959, 1081
StyI CCWWGG 4 cut(s) 96, 477, 774, 1156
TaaI ACNGT 1 cut(s) 907
TaiI ACGT 2 cut(s) 219, 1098
TaqI TCGA 8 cut(s) 12, 172, 275, 363, 612, 654, 1007, 1087
TauI GCSGC 1 cut(s) 74
TfiI GAWTC 3 cut(s) 272, 557, 926
Tru1I TTAA 3 cut(s) 372, 549, 639
Tru9I TTAA 3 cut(s) 372, 549, 639
TscAI CASTG 2 cut(s) 910, 1225
TseFI GTSAC 3 cut(s) 292, 498, 1016
TseI GCWGC 3 cut(s) 239, 770, 1075
Tsp45I GTSAC 3 cut(s) 292, 498, 1016
TspDTI ATGAA 9 cut(s) 67, 120, 249, 447, 960, 979, 1154, 1182, 1271
TspRI CASTG 2 cut(s) 910, 1225
Vha464I CTTAAG 2 cut(s) 548, 638
VneI GTGCAC 1 cut(s) 1097
VpaK11BI GGWCC 5 cut(s) 88, 103, 474, 628, 737
XapI RAATTY 1 cut(s) 1161
XceI RCATGY 3 cut(s) 28, 506, 1111
XmiI GTMKAC 2 cut(s) 249, 860
XmnI GAANNNNTTC 1 cut(s) 686
XspI CTAG 2 cut(s) 819, 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.