Rroxscaffold_2G00141940

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000471
Physical Location & Seq
Reverse (-)
80131754 .. 80134881
3128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00141940.1

Sequence Viewer

Length: 1380 bp
ATGTTGGTTGCATTGTCCCAAAACCTGGATATTCCCAGTAACTTCAAAATGTATCCTCTGAATCTCAGAGAGATGCCCACAACAGCATCGTCCTTGTTCTCCGCCTATGCCTCCTTCACTGCACTCATCATGTTGATCAAGTCCATGGCGGACCAACTCATGTCACTCATCCCTCCTCAACTCCGCTCATACTTGTCCTCAATCCTCCACCACTTCTACGCCCCTCGCTCCGCTGACCTCACTCTTATTGTGGACGAGAAGTGTGGCCATATGATAAACCAAGTCTATGAAGCCGTGGAGGTCTACCTCAAGACCAAGATCAGTCCTCTCAATGAGCGTCTGCGGGTGAGCAGAACACCCGGACAGAAAACTCTCAGCATTACCATCGACAGAAACGAAGAGATCATCGATTACTCCGACAACATCACACTAAAGTGGCGTTATGTGTGCACTGAAGCACAAAAAGGTGGGGGTGGACCGGGGTGTGACAGGGAAAAGCGCAAGTTTGAGCTCACTTTCAACAAGAAACACAAGGCCGAGGTGATAGACTCCTACCTACACCATGTGTTGGCTCGGGCTGATGCACTTAGGCAAGAGGAAAAGGTTCTCAAGCTTGCTTCCCAAAATTCGGGTAGTTCCATAGATCTGCAGCACCCTTCAACTTTCGACACACTGGCTATGGACCCCAAGCTCAAGAGAATGATTATCGAGGATTTGGACAGGTTCTTAAGGAGGAAGGAGTTTTATAAGAAGGTTGGCAAGGCTTGGAAAAGAGGTTACTTGTTGTATGGTCCACCTGGTACTGGAAAATCAAGCTTGATTGCAGCCATGGCTAATTATCTTAAGTTTGATGTCCATGATTTGGACCTCAGTAGAATTTTCAACAACAGTGAATTGAGGAGGATTCTGCTGTCTTCTTCAAATCGTTCTATTTTGGTCATTGAGGACATTGATTGCAGCGTGCAAATAGAAAACCGGAAAGAGGAGAAAAGTAGACAATCTAATACCAATCAGTTTACTCTCTCGGGCCTACTGAACTTCATTGATGGTCTGTGGTCAAGCTGCGGTGATGGGAGAATCATTGTGTTCACCACCAACCACAAGGACAAACTAGACCCTGCATTGTTGCGTCCCGGTCGAATGGATGTGCACATTCACATGTCGTATTGCACTGCGAGTGGGTTCAGAATCTTGGCCTCTAACTACCTCGGCATTCAAGAAAGCAACCCTCATAACCTTTGCAGAGAAATTGAAGGTTTAATAGAGAGCACTGAGGTAACCCCTGCAGAGGTTGCTGAGGAGCTCTTGAAGAGTGATGATGCTGATGTTGTTCTTGAAGGACTTGTTGATTTCCTGAAAAGAAAGAAGGAAGAGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

459

Amino Acids

52.17

Weight (kDa)

8.03

Isoelectric Point (pI)

53.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 57 - 150 1.9e-20 Domain associated at C-terminal with AAA
AAA PF00004 260 - 388 3.7e-22 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 390 - 458 3.7e-21 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18190 AT2G18193
fragaria_vesca FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 747
AccB7I CCANNNNNTGG 3 cut(s) 25, 568, 862
AccBSI CCGCTC 1 cut(s) 186
AccI GTMKAC 2 cut(s) 303, 994
AciI CCGC 6 cut(s) 102, 149, 184, 231, 343, 1065
AcoI YGGCCR 1 cut(s) 265
AcsI RAATTY 2 cut(s) 625, 876
AcuI CTGAAG 1 cut(s) 474
AdeI CACNNNGTG 1 cut(s) 565
AfaI GTAC 1 cut(s) 802
AfiI CCNNNNNNNGG 7 cut(s) 25, 568, 628, 803, 862, 982, 1288
AflII CTTAAG 2 cut(s) 727, 842
AflIII ACRYGT 1 cut(s) 1158
AgsI TTSAA 9 cut(s) 46, 520, 660, 883, 921, 1217, 1253, 1309, 1337
AjnI CCWGG 2 cut(s) 24, 796
AleI CACNNNNGTG 1 cut(s) 433
AluBI AGCT 6 cut(s) 511, 613, 691, 816, 1062, 1303
AluI AGCT 6 cut(s) 511, 613, 691, 816, 1062, 1303
Alw21I GWGCWC 5 cut(s) 452, 513, 1152, 1271, 1305
Alw44I GTGCAC 2 cut(s) 448, 1148
Ama87I CYCGRG 2 cut(s) 573, 1024
AoxI GGCC 4 cut(s) 265, 534, 1027, 1194
ApaLI GTGCAC 2 cut(s) 448, 1148
ApeKI GCWGC 4 cut(s) 649, 824, 957, 1062
ApoI RAATTY 2 cut(s) 625, 876
Asp700I GAANNNNTTC 1 cut(s) 603
AspLEI GCGC 1 cut(s) 501
AspS9I GGNCC 6 cut(s) 151, 476, 682, 791, 865, 1027
AsuC2I CCSGG 3 cut(s) 360, 480, 1134
AsuHPI GGTGA 4 cut(s) 358, 553, 1079, 1081
AvaI CYCGRG 2 cut(s) 573, 1024
AvaII GGWCC 5 cut(s) 151, 476, 682, 791, 865
BaeGI GKGCMC 2 cut(s) 452, 1152
BalI TGGCCA 1 cut(s) 267
BanII GRGCYC 2 cut(s) 513, 1305
BbsI GAAGAC 1 cut(s) 906
Bbv12I GWGCWC 5 cut(s) 452, 513, 1152, 1271, 1305
BbvCI CCTCAGC 1 cut(s) 1296
BbvI GCAGC 4 cut(s) 661, 836, 969, 1049
BccI CCATC 3 cut(s) 392, 1040, 1064
BceAI ACGGC 1 cut(s) 278
BcgI CGANNNNNNTGC 2 cut(s) 367, 401
BciT130I CCWGG 2 cut(s) 26, 798
BciVI GTATCC 1 cut(s) 63
BclI TGATCA 1 cut(s) 135
BcnI CCSGG 3 cut(s) 360, 480, 1134
BfaI CTAG 1 cut(s) 1112
BfmI CTRYAG 2 cut(s) 647, 1284
BfrI CTTAAG 2 cut(s) 727, 842
BfuI GTATCC 1 cut(s) 63
BglII AGATCT 1 cut(s) 643
BisI GCNGC 4 cut(s) 650, 825, 958, 1063
BlsI GCNGC 4 cut(s) 651, 826, 959, 1064
Bme1390I CCNGG 5 cut(s) 26, 360, 480, 798, 1134
Bme18I GGWCC 5 cut(s) 151, 476, 682, 791, 865
BmeT110I CYCGRG 2 cut(s) 573, 1024
BmgT120I GGNCC 6 cut(s) 151, 476, 682, 791, 865, 1027
BmiI GGNNCC 1 cut(s) 684
BmrFI CCNGG 5 cut(s) 26, 360, 480, 798, 1134
BmrI ACTGGG 1 cut(s) 30
BmsI GCATC 4 cut(s) 63, 95, 571, 1309
BmuI ACTGGG 1 cut(s) 30
BpiI GAAGAC 1 cut(s) 906
Bpu10I CCTNAGC 1 cut(s) 1296
BpuEI CTTGAG 3 cut(s) 293, 593, 677
BpuMI CCSGG 3 cut(s) 360, 480, 1134
Bsa29I ATCGAT 1 cut(s) 408
BsaJI CCNNGG 6 cut(s) 144, 294, 479, 537, 828, 1207
BsaWI WCCGGW 1 cut(s) 975
Bsc4I CCNNNNNNNGG 7 cut(s) 25, 568, 628, 803, 862, 982, 1288
Bse1I ACTGG 3 cut(s) 36, 678, 808
BseBI CCWGG 2 cut(s) 26, 798
BseCI ATCGAT 1 cut(s) 408
BseDI CCNNGG 6 cut(s) 144, 294, 479, 537, 828, 1207
BseGI GGATG 2 cut(s) 168, 1150
BseLI CCNNNNNNNGG 7 cut(s) 25, 568, 628, 803, 862, 982, 1288
BseMII CTCAG 5 cut(s) 79, 388, 883, 1263, 1287
BseNI ACTGG 3 cut(s) 36, 678, 808
BseRI GAGGAG 4 cut(s) 165, 913, 998, 1313
BseSI GKGCMC 2 cut(s) 452, 1152
BseXI GCAGC 4 cut(s) 661, 836, 969, 1049
BsgI GTGCAG 1 cut(s) 105
Bsh1285I CGRYCG 1 cut(s) 1138
BshFI GGCC 4 cut(s) 267, 536, 1029, 1196
BshVI ATCGAT 1 cut(s) 408
BsiEI CGRYCG 1 cut(s) 1138
BsiHKAI GWGCWC 5 cut(s) 452, 513, 1152, 1271, 1305
BsiHKCI CYCGRG 2 cut(s) 573, 1024
BsiSI CCGG 4 cut(s) 360, 479, 976, 1134
BslFI GGGAC 1 cut(s) 1116
BslI CCNNNNNNNGG 7 cut(s) 25, 568, 628, 803, 862, 982, 1288
BsmFI GGGAC 1 cut(s) 1116
BsmI GAATGC 1 cut(s) 1212
BsnI GGCC 4 cut(s) 267, 536, 1029, 1196
BsoBI CYCGRG 2 cut(s) 573, 1024
Bsp1286I GDGCHC 5 cut(s) 452, 513, 1152, 1271, 1305
Bsp143I GATC 4 cut(s) 135, 318, 402, 643
Bsp19I CCATGG 2 cut(s) 144, 828
BspACI CCGC 6 cut(s) 102, 149, 184, 231, 343, 1065
BspANI GGCC 4 cut(s) 267, 536, 1029, 1196
BspCNI CTCAG 5 cut(s) 78, 387, 882, 1264, 1288
BspDI ATCGAT 1 cut(s) 408
BspLI GGNNCC 1 cut(s) 684
BspMAI CTGCAG 2 cut(s) 651, 1288
BspTI CTTAAG 2 cut(s) 727, 842
BsrBI CCGCTC 1 cut(s) 186
BsrI ACTGG 3 cut(s) 36, 678, 808
BssECI CCNNGG 6 cut(s) 144, 294, 479, 537, 828, 1207
BssMI GATC 4 cut(s) 135, 318, 402, 643
BssT1I CCWWGG 2 cut(s) 144, 828
Bst2UI CCWGG 2 cut(s) 26, 798
Bst4CI ACNGT 1 cut(s) 890
Bst6I CTCTTC 3 cut(s) 393, 1304, 1365
BstAFI CTTAAG 2 cut(s) 727, 842
BstAPI GCANNNNNTGC 1 cut(s) 1292
BstC8I GCNNGC 2 cut(s) 615, 962
BstDEI CTNAG 6 cut(s) 65, 374, 587, 869, 1272, 1296
BstDSI CCRYGG 3 cut(s) 144, 294, 828
BstEII GGTNACC 1 cut(s) 1276
BstF5I GGATG 2 cut(s) 168, 1150
BstHHI GCGC 1 cut(s) 501
BstKTI GATC 4 cut(s) 138, 321, 405, 646
BstMBI GATC 4 cut(s) 135, 318, 402, 643
BstMCI CGRYCG 1 cut(s) 1138
BstMWI GCNNNNNNNGC 2 cut(s) 830, 1292
BstNI CCWGG 2 cut(s) 26, 798
BstNSI RCATGY 1 cut(s) 1162
BstPI GGTNACC 1 cut(s) 1276
BstSCI CCNGG 5 cut(s) 24, 358, 478, 796, 1132
BstSFI CTRYAG 2 cut(s) 647, 1284
BstSLI GKGCMC 2 cut(s) 452, 1152
BstV1I GCAGC 4 cut(s) 661, 836, 969, 1049
BstV2I GAAGAC 1 cut(s) 906
BstX2I RGATCY 1 cut(s) 643
BstYI RGATCY 1 cut(s) 643
Bsu15I ATCGAT 1 cut(s) 408
BsuI GTATCC 1 cut(s) 63
BsuRI GGCC 4 cut(s) 267, 536, 1029, 1196
BsuTUI ATCGAT 1 cut(s) 408
BtgI CCRYGG 3 cut(s) 144, 294, 828
BtsCI GGATG 2 cut(s) 168, 1150
BtsI GCAGTG 2 cut(s) 117, 1170
BtsIMutI CAGTG 6 cut(s) 117, 450, 671, 895, 1170, 1269
Cac8I GCNNGC 2 cut(s) 615, 962
CfoI GCGC 1 cut(s) 501
Cfr13I GGNCC 6 cut(s) 151, 476, 682, 791, 865, 1027
ClaI ATCGAT 1 cut(s) 408
CseI GACGC 2 cut(s) 326, 1118
CsiI ACCWGGT 1 cut(s) 796
Csp6I GTAC 1 cut(s) 801
CviAII CATG 7 cut(s) 130, 145, 160, 563, 829, 857, 1159
CviQI GTAC 1 cut(s) 801
DdeI CTNAG 6 cut(s) 65, 374, 587, 869, 1272, 1296
DpnI GATC 4 cut(s) 137, 320, 404, 645
DpnII GATC 4 cut(s) 135, 318, 402, 643
DraIII CACNNNGTG 1 cut(s) 565
EaeI YGGCCR 1 cut(s) 265
Eam1104I CTCTTC 3 cut(s) 393, 1304, 1365
EarI CTCTTC 3 cut(s) 393, 1304, 1365
EciI GGCGGA 2 cut(s) 91, 164
Ecl136II GAGCTC 2 cut(s) 511, 1303
Eco130I CCWWGG 2 cut(s) 144, 828
Eco24I GRGCYC 2 cut(s) 513, 1305
Eco47I GGWCC 5 cut(s) 151, 476, 682, 791, 865
Eco53kI GAGCTC 2 cut(s) 511, 1303
Eco57I CTGAAG 1 cut(s) 474
Eco88I CYCGRG 2 cut(s) 573, 1024
Eco91I GGTNACC 1 cut(s) 1276
EcoICRI GAGCTC 2 cut(s) 511, 1303
EcoO65I GGTNACC 1 cut(s) 1276
EcoRII CCWGG 2 cut(s) 24, 796
EcoT14I CCWWGG 2 cut(s) 144, 828
EcoT38I GRGCYC 2 cut(s) 513, 1305
ErhI CCWWGG 2 cut(s) 144, 828
FaeI CATG 7 cut(s) 133, 148, 163, 566, 832, 860, 1162
FaqI GGGAC 1 cut(s) 1116
FatI CATG 7 cut(s) 129, 144, 159, 562, 828, 856, 1158
FauI CCCGC 1 cut(s) 336
FauNDI CATATG 1 cut(s) 270
FbaI TGATCA 1 cut(s) 135
FblI GTMKAC 2 cut(s) 303, 994
Fnu4HI GCNGC 4 cut(s) 650, 825, 958, 1063
FokI GGATG 2 cut(s) 155, 1157
FriOI GRGCYC 2 cut(s) 513, 1305
Fsp4HI GCNGC 4 cut(s) 650, 825, 958, 1063
FspBI CTAG 1 cut(s) 1112
GlaI GCGC 1 cut(s) 500
GluI GCNGC 4 cut(s) 650, 825, 958, 1063
HaeIII GGCC 4 cut(s) 267, 536, 1029, 1196
HapII CCGG 4 cut(s) 360, 479, 976, 1134
HgaI GACGC 2 cut(s) 326, 1118
HhaI GCGC 1 cut(s) 501
Hin1II CATG 7 cut(s) 133, 148, 163, 566, 832, 860, 1162
Hin6I GCGC 1 cut(s) 499
HinP1I GCGC 1 cut(s) 499
HindIII AAGCTT 2 cut(s) 611, 814
HinfI GANTC 5 cut(s) 61, 548, 904, 1077, 1188
HpaII CCGG 4 cut(s) 360, 479, 976, 1134
HphI GGTGA 4 cut(s) 358, 553, 1079, 1081
Hpy166II GTNNAC 9 cut(s) 253, 304, 450, 476, 794, 995, 1017, 1089, 1150
Hpy188I TCNGA 4 cut(s) 60, 68, 418, 1187
Hpy188III TCNNGA 6 cut(s) 310, 694, 1217, 1306, 1334, 1354
Hpy8I GTNNAC 9 cut(s) 253, 304, 450, 476, 794, 995, 1017, 1089, 1150
HpyAV CCTTC 7 cut(s) 124, 666, 730, 745, 1247, 1331, 1360
HpyCH4III ACNGT 1 cut(s) 890
HpyF10VI GCNNNNNNNGC 2 cut(s) 830, 1292
HpyF3I CTNAG 6 cut(s) 65, 374, 587, 869, 1272, 1296
Hsp92II CATG 7 cut(s) 133, 148, 163, 566, 832, 860, 1162
HspAI GCGC 1 cut(s) 499
Ksp22I TGATCA 1 cut(s) 135
Kzo9I GATC 4 cut(s) 135, 318, 402, 643
LmnI GCTCC 2 cut(s) 233, 1300
Lsp1109I GCAGC 4 cut(s) 661, 836, 969, 1049
LweI GCATC 4 cut(s) 63, 95, 571, 1309
MabI ACCWGGT 1 cut(s) 796
MaeI CTAG 1 cut(s) 1112
MaeIII GTNAC 5 cut(s) 38, 162, 485, 776, 1276
MalI GATC 4 cut(s) 137, 320, 404, 645
MbiI CCGCTC 1 cut(s) 186
MboI GATC 4 cut(s) 135, 318, 402, 643
MboII GAAGA 4 cut(s) 410, 906, 909, 1321
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 5 cut(s) 452, 513, 1152, 1271, 1305
MlsI TGGCCA 1 cut(s) 267
MluCI AATT 5 cut(s) 625, 835, 876, 893, 1248
MluNI TGGCCA 1 cut(s) 267
MlyI GAGTC 1 cut(s) 542
MmeI TCCRAC 1 cut(s) 441
Mox20I TGGCCA 1 cut(s) 267
MroXI GAANNNNTTC 1 cut(s) 603
MscI TGGCCA 1 cut(s) 267
MseI TTAA 3 cut(s) 728, 843, 1259
MslI CAYNNNNRTG 2 cut(s) 433, 1157
Msp20I TGGCCA 1 cut(s) 267
MspA1I CMGCKG 1 cut(s) 233
MspCI CTTAAG 2 cut(s) 727, 842
MspI CCGG 4 cut(s) 360, 479, 976, 1134
MspR9I CCNGG 5 cut(s) 26, 360, 480, 798, 1134
Mva1269I GAATGC 1 cut(s) 1212
MvaI CCWGG 2 cut(s) 26, 798
MwoI GCNNNNNNNGC 2 cut(s) 830, 1292
NciI CCSGG 3 cut(s) 360, 480, 1134
NcoI CCATGG 2 cut(s) 144, 828
NdeI CATATG 1 cut(s) 270
NdeII GATC 4 cut(s) 135, 318, 402, 643
NlaIII CATG 7 cut(s) 133, 148, 163, 566, 832, 860, 1162
NlaIV GGNNCC 1 cut(s) 684
NmeAIII GCCGAG 2 cut(s) 562, 1188
NmuCI GTSAC 2 cut(s) 162, 485
NspI RCATGY 1 cut(s) 1162
OliI CACNNNNGTG 1 cut(s) 433
PciI ACATGT 1 cut(s) 1158
PcsI WCGNNNNNNNCGW 2 cut(s) 393, 414
PctI GAATGC 1 cut(s) 1212
PdmI GAANNNNTTC 1 cut(s) 603
PfeI GAWTC 4 cut(s) 61, 904, 1077, 1188
PflMI CCANNNNNTGG 3 cut(s) 25, 568, 862
PkrI GCNGC 4 cut(s) 651, 826, 959, 1064
PleI GAGTC 1 cut(s) 542
PpsI GAGTC 1 cut(s) 542
PscI ACATGT 1 cut(s) 1158
PsiI TTATAA 1 cut(s) 747
Psp124BI GAGCTC 2 cut(s) 513, 1305
Psp6I CCWGG 2 cut(s) 24, 796
PspEI GGTNACC 1 cut(s) 1276
PspGI CCWGG 2 cut(s) 24, 796
PspN4I GGNNCC 1 cut(s) 684
PspPI GGNCC 6 cut(s) 151, 476, 682, 791, 865, 1027
PstI CTGCAG 2 cut(s) 651, 1288
PsuI RGATCY 1 cut(s) 643
RsaI GTAC 1 cut(s) 802
RsaNI GTAC 1 cut(s) 801
RseI CAYNNNNRTG 2 cut(s) 433, 1157
SacI GAGCTC 2 cut(s) 513, 1305
SaqAI TTAA 3 cut(s) 728, 843, 1259
SatI GCNGC 4 cut(s) 650, 825, 958, 1063
Sau3AI GATC 4 cut(s) 135, 318, 402, 643
Sau96I GGNCC 6 cut(s) 151, 476, 682, 791, 865, 1027
SchI GAGTC 1 cut(s) 542
ScrFI CCNGG 5 cut(s) 26, 360, 480, 798, 1134
SduI GDGCHC 5 cut(s) 452, 513, 1152, 1271, 1305
SexAI ACCWGGT 1 cut(s) 796
SfaNI GCATC 4 cut(s) 63, 95, 571, 1309
SfcI CTRYAG 2 cut(s) 647, 1284
SinI GGWCC 5 cut(s) 151, 476, 682, 791, 865
SmiMI CAYNNNNRTG 2 cut(s) 433, 1157
SmlI CTYRAG 5 cut(s) 308, 608, 692, 727, 842
SmoI CTYRAG 5 cut(s) 308, 608, 692, 727, 842
Sse9I AATT 5 cut(s) 625, 835, 876, 893, 1248
SsiI CCGC 6 cut(s) 102, 149, 184, 231, 343, 1065
SspMI CTAG 1 cut(s) 1112
SstI GAGCTC 2 cut(s) 513, 1305
StyD4I CCNGG 5 cut(s) 24, 358, 478, 796, 1132
StyI CCWWGG 2 cut(s) 144, 828
TaaI ACNGT 1 cut(s) 890
TaqI TCGA 5 cut(s) 387, 408, 666, 708, 1138
TasI AATT 5 cut(s) 625, 835, 876, 893, 1248
TfiI GAWTC 4 cut(s) 61, 904, 1077, 1188
Tru1I TTAA 3 cut(s) 728, 843, 1259
Tru9I TTAA 3 cut(s) 728, 843, 1259
TscAI CASTG 6 cut(s) 124, 457, 678, 895, 1177, 1276
TseFI GTSAC 2 cut(s) 162, 485
TseI GCWGC 4 cut(s) 649, 824, 957, 1062
Tsp45I GTSAC 2 cut(s) 162, 485
TspDTI ATGAA 2 cut(s) 303, 1030
TspRI CASTG 6 cut(s) 124, 457, 678, 895, 1177, 1276
Van91I CCANNNNNTGG 3 cut(s) 25, 568, 862
Vha464I CTTAAG 2 cut(s) 727, 842
VneI GTGCAC 2 cut(s) 448, 1148
VpaK11BI GGWCC 5 cut(s) 151, 476, 682, 791, 865
XapI RAATTY 2 cut(s) 625, 876
XceI RCATGY 1 cut(s) 1162
XmiI GTMKAC 2 cut(s) 303, 994
XmnI GAANNNNTTC 1 cut(s) 603
XspI CTAG 1 cut(s) 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.