FvH4_1g12690

Domain associated at C-terminal with AAA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000471
Physical Location & Seq
Forward (+)
6972258 .. 6974142
1885 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g12690.t1

Sequence Viewer

Length: 1461 bp
ATGACAATGTTTCCACTCAACTTTGAGAGCCTCAACCTTACAAACATGCCCACAACCGCATCGTCCTTGTTCTCAGCCTATGCCTCCCTCAACGCTTTCATAATGTTGGTCCGTTCCATGCTTGATCAGCTCATCCCCCACGAGCTCCGCTACTACATCTTCTCCTTCTTCCGCCGCCTCTTCACCTTCCCCTCCTCCGAGCTCACTCTTATCGTCGACGAGAGCTGCGGGATGGAACACAACACAATCTATGAGGCTGCCGAGGTCTACCTCCGGACCAAGATCAGTCCCACCAACGACCGTCTCCGAGTGAGAAAGGCACCTCGGCAGAAGAACATAACTGTCACCATTGAGAAAGGAGAAGAAATCAAAGACAGTTTCGAGGGGATAAACATCAACTGGCGCTGCGTGTGCAGCGGAGGAGAGGATGAGCAGAACCGCCATGCGCAACAGAAGCGTCAGTTTGAGCTGACGGTGAAGAAGAAACATAGAGTCAAAGTGATCGAGTCCTACTTGCCCTATGTGCTCGAAAGAGCCGAGGTTATTAAGAATGAGAACAAGGTTGTGAAGCTCTACAGCCAAATGGCGGAATATGATCCGTATGATAGTGATGGTGGAAGTTCGGACTGGAATTCTATAAATTTAGAGCAGCCGGCTAACTTTGCGACACTCGCCATGGATCCGGAGGTGAAGAGGACAATCATTGAGGATTTGGATAGGTTTTTGAGGAGGAGTGAGTTTTATAAGAAGGTTGGGAAGGCTTGGAAAAGAGGGTATTTGTTGTACGGTCCACCCGGGACTGGCAAATCCAGCTTGATTGCAGCCATGGCTAACTACCTCAAGTTTGATATATATGATGTGGAGCTTACTAGTATTCTAGACAACTCGGAGTTGAGGAGGATACTGCTGAGTACTACAAACCGTTCTATCTTGGTCATCGAGGATATTGATTGCAGTGTGGAGATGCAAAACCGGGATTGTGAGGAAGATGATCATCAACCATCTAACACTAAGATAACACTCTCCGGGCTATTGAACTTTATAGATGGTTTATGGTCAAGCTGTGGAGATGAGAGAATCATTGTGTTCACCACCAACCACAAGCACAAGATAGACCCGGCATTGTTGCGTCCTGGTCGAATGGATGTGCACATTCACATGTCGTATTGCACTCCAAGCGGGTTCAGGATCTTGGCCTCTAACTACCTTGGTATACAAGAGAGCAATCCTCATCGCCTATGCGGAGAAATTGAGGAGTTAATAGAGAGCACAAAGGTCACCCCCGCGGAGATTGCTGAGGAGTTCATGAGGAGTGAGGATGCTGATGTTGCTCTCGAAGGACTTGTAGAGCTCCTAAAGAAAAAGAAGGAAGAGAGTAACAAAATTGTGAATGAAAGGATCGATAAATCTAAAATTCAAAAAACAGATCAAGATGAAGAGAAGGGGGAGCTCAGTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

487

Amino Acids

55.89

Weight (kDa)

5.46

Isoelectric Point (pI)

56.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 45 - 138 1.9e-26 Domain associated at C-terminal with AAA
AAA PF00004 259 - 388 1e-20 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 390 - 460 1e-22 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18190 AT2G18193
fragaria_vesca FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 744
Acc16I TGCGCA 1 cut(s) 447
AccB1I GGYRCC 1 cut(s) 319
AccI GTMKAC 3 cut(s) 216, 267, 1213
AccII CGCG 1 cut(s) 1286
AccIII TCCGGA 2 cut(s) 273, 682
AclWI GGATC 5 cut(s) 590, 674, 687, 1196, 1406
AcsI RAATTY 3 cut(s) 631, 640, 1413
AfaI GTAC 2 cut(s) 785, 913
AfiI CCNNNNNNNGG 2 cut(s) 586, 800
AflIII ACRYGT 1 cut(s) 1158
AgsI TTSAA 2 cut(s) 1036, 1418
AhlI ACTAGT 1 cut(s) 869
AjnI CCWGG 1 cut(s) 1132
Alw21I GWGCWC 7 cut(s) 147, 204, 528, 1152, 1271, 1353, 1452
Alw26I GTCTC 1 cut(s) 308
Alw44I GTGCAC 1 cut(s) 1148
AlwI GGATC 5 cut(s) 590, 674, 687, 1196, 1406
Ama87I CYCGRG 1 cut(s) 794
Aor13HI TCCGGA 2 cut(s) 273, 682
AoxI GGCC 1 cut(s) 1194
ApaLI GTGCAC 1 cut(s) 1148
ApeKI GCWGC 6 cut(s) 225, 257, 405, 414, 649, 821
ApoI RAATTY 3 cut(s) 631, 640, 1413
AspLEI GCGC 2 cut(s) 405, 448
AspS9I GGNCC 3 cut(s) 109, 276, 788
AsuC2I CCSGG 5 cut(s) 795, 796, 974, 1027, 1118
AsuHPI GGTGA 6 cut(s) 175, 337, 487, 700, 1081, 1270
AvaI CYCGRG 1 cut(s) 794
AvaII GGWCC 3 cut(s) 109, 276, 788
BaeGI GKGCMC 1 cut(s) 1152
BamHI GGATCC 1 cut(s) 679
BanI GGYRCC 1 cut(s) 319
BanII GRGCYC 4 cut(s) 147, 204, 1353, 1452
BauI CACGAG 1 cut(s) 140
Bbv12I GWGCWC 7 cut(s) 147, 204, 528, 1152, 1271, 1353, 1452
BbvCI CCTCAGC 1 cut(s) 1296
BbvI GCAGC 6 cut(s) 212, 244, 392, 426, 661, 833
BccI CCATC 4 cut(s) 226, 605, 1009, 1040
BciT130I CCWGG 1 cut(s) 1134
BciVI GTATCC 1 cut(s) 894
BclI TGATCA 2 cut(s) 124, 991
BcnI CCSGG 5 cut(s) 795, 796, 974, 1027, 1118
BcoDI GTCTC 1 cut(s) 308
BcuI ACTAGT 1 cut(s) 869
BfaI CTAG 2 cut(s) 870, 878
BfmI CTRYAG 1 cut(s) 574
BfoI RGCGCY 1 cut(s) 406
BfuI GTATCC 1 cut(s) 894
BisI GCNGC 7 cut(s) 175, 226, 258, 406, 415, 650, 822
BlsI GCNGC 7 cut(s) 176, 227, 259, 407, 416, 651, 823
BmcAI AGTACT 1 cut(s) 913
Bme1390I CCNGG 6 cut(s) 795, 796, 974, 1027, 1118, 1134
Bme18I GGWCC 3 cut(s) 109, 276, 788
BmeT110I CYCGRG 1 cut(s) 794
BmgT120I GGNCC 3 cut(s) 109, 276, 788
BmiI GGNNCC 2 cut(s) 321, 681
BmrFI CCNGG 6 cut(s) 795, 796, 974, 1027, 1118, 1134
BmsI GCATC 3 cut(s) 68, 954, 1309
BplI GAGNNNNNCTC 2 cut(s) 1213, 1245
Bpu10I CCTNAGC 1 cut(s) 1296
BpuEI CTTGAG 1 cut(s) 824
BpuMI CCSGG 5 cut(s) 795, 796, 974, 1027, 1118
Bsa29I ATCGAT 1 cut(s) 1401
BsaBI GATNNNNATC 2 cut(s) 392, 993
BsaJI CCNNGG 8 cut(s) 261, 323, 537, 675, 794, 825, 1207, 1284
BsaWI WCCGGW 2 cut(s) 273, 682
BsaXI ACNNNNNCTCC 2 cut(s) 146, 176
Bsc4I CCNNNNNNNGG 2 cut(s) 586, 800
Bse118I RCCGGY 1 cut(s) 652
Bse1I ACTGG 3 cut(s) 404, 632, 805
Bse8I GATNNNNATC 2 cut(s) 392, 993
BseAI TCCGGA 2 cut(s) 273, 682
BseBI CCWGG 1 cut(s) 1134
BseCI ATCGAT 1 cut(s) 1401
BseDI CCNNGG 8 cut(s) 261, 323, 537, 675, 794, 825, 1207, 1284
BseGI GGATG 5 cut(s) 132, 237, 433, 1150, 1324
BseJI GATNNNNATC 2 cut(s) 392, 993
BseLI CCNNNNNNNGG 2 cut(s) 586, 800
BseMII CTCAG 3 cut(s) 87, 899, 1287
BseNI ACTGG 3 cut(s) 404, 632, 805
BseRI GAGGAG 8 cut(s) 184, 435, 742, 745, 910, 1268, 1313, 1324
BseSI GKGCMC 1 cut(s) 1152
BseXI GCAGC 6 cut(s) 212, 244, 392, 426, 661, 833
BsgI GTGCAG 1 cut(s) 433
Bsh1236I CGCG 1 cut(s) 1286
Bsh1285I CGRYCG 1 cut(s) 301
BshFI GGCC 1 cut(s) 1196
BshNI GGYRCC 1 cut(s) 319
BshVI ATCGAT 1 cut(s) 1401
BsiEI CGRYCG 1 cut(s) 301
BsiHKAI GWGCWC 7 cut(s) 147, 204, 528, 1152, 1271, 1353, 1452
BsiHKCI CYCGRG 1 cut(s) 794
BsiSI CCGG 7 cut(s) 274, 653, 683, 795, 973, 1026, 1118
BslFI GGGAC 2 cut(s) 273, 811
BslI CCNNNNNNNGG 2 cut(s) 586, 800
BsmAI GTCTC 1 cut(s) 308
BsmBI CGTCTC 1 cut(s) 308
BsmFI GGGAC 2 cut(s) 273, 811
BsnI GGCC 1 cut(s) 1196
BsoBI CYCGRG 1 cut(s) 794
Bsp1286I GDGCHC 7 cut(s) 147, 204, 528, 1152, 1271, 1353, 1452
Bsp13I TCCGGA 2 cut(s) 273, 682
Bsp143I GATC 9 cut(s) 124, 282, 501, 595, 679, 991, 1188, 1398, 1426
Bsp19I CCATGG 2 cut(s) 675, 825
BspANI GGCC 1 cut(s) 1196
BspCNI CTCAG 3 cut(s) 86, 900, 1288
BspDI ATCGAT 1 cut(s) 1401
BspEI TCCGGA 2 cut(s) 273, 682
BspFNI CGCG 1 cut(s) 1286
BspHI TCATGA 1 cut(s) 1305
BspLI GGNNCC 2 cut(s) 321, 681
BspPI GGATC 5 cut(s) 590, 674, 687, 1196, 1406
BspT107I GGYRCC 1 cut(s) 319
BsrFI RCCGGY 1 cut(s) 652
BsrI ACTGG 3 cut(s) 404, 632, 805
BssAI RCCGGY 1 cut(s) 652
BssECI CCNNGG 8 cut(s) 261, 323, 537, 675, 794, 825, 1207, 1284
BssMI GATC 9 cut(s) 124, 282, 501, 595, 679, 991, 1188, 1398, 1426
BssNAI GTATAC 1 cut(s) 1214
BssSI CACGAG 1 cut(s) 140
BssT1I CCWWGG 3 cut(s) 675, 825, 1207
Bst1107I GTATAC 1 cut(s) 1214
Bst2BI CACGAG 1 cut(s) 140
Bst2UI CCWGG 1 cut(s) 1134
Bst4CI ACNGT 6 cut(s) 302, 343, 377, 475, 788, 923
Bst6I CTCTTC 4 cut(s) 185, 686, 1365, 1431
BstC8I GCNNGC 1 cut(s) 654
BstDEI CTNAG 5 cut(s) 73, 908, 1011, 1296, 1451
BstDSI CCRYGG 3 cut(s) 675, 825, 1284
BstEII GGTNACC 1 cut(s) 1276
BstF5I GGATG 5 cut(s) 132, 237, 433, 1150, 1324
BstFNI CGCG 1 cut(s) 1286
BstH2I RGCGCY 1 cut(s) 406
BstHHI GCGC 2 cut(s) 405, 448
BstKTI GATC 9 cut(s) 127, 285, 504, 598, 682, 994, 1191, 1401, 1429
BstMAI GTCTC 1 cut(s) 308
BstMBI GATC 9 cut(s) 124, 282, 501, 595, 679, 991, 1188, 1398, 1426
BstMCI CGRYCG 1 cut(s) 301
BstNI CCWGG 1 cut(s) 1134
BstNSI RCATGY 2 cut(s) 49, 1162
BstPI GGTNACC 1 cut(s) 1276
BstSCI CCNGG 6 cut(s) 793, 794, 972, 1025, 1116, 1132
BstSFI CTRYAG 1 cut(s) 574
BstSLI GKGCMC 1 cut(s) 1152
BstUI CGCG 1 cut(s) 1286
BstV1I GCAGC 6 cut(s) 212, 244, 392, 426, 661, 833
BstX2I RGATCY 2 cut(s) 679, 1188
BstYI RGATCY 2 cut(s) 679, 1188
BstZ17I GTATAC 1 cut(s) 1214
Bsu15I ATCGAT 1 cut(s) 1401
BsuI GTATCC 1 cut(s) 894
BsuRI GGCC 1 cut(s) 1196
BsuTUI ATCGAT 1 cut(s) 1401
BtgI CCRYGG 3 cut(s) 675, 825, 1284
BtgZI GCGATG 1 cut(s) 1217
BtsCI GGATG 5 cut(s) 132, 237, 433, 1150, 1324
BtsI GCAGTG 1 cut(s) 961
BtsIMutI CAGTG 1 cut(s) 961
Cac8I GCNNGC 1 cut(s) 654
CciI TCATGA 1 cut(s) 1305
CfoI GCGC 2 cut(s) 405, 448
Cfr10I RCCGGY 1 cut(s) 652
Cfr13I GGNCC 3 cut(s) 109, 276, 788
Cfr42I CCGCGG 1 cut(s) 1287
Cfr9I CCCGGG 1 cut(s) 794
ClaI ATCGAT 1 cut(s) 1401
CseI GACGC 2 cut(s) 446, 1118
Csp6I GTAC 2 cut(s) 784, 912
CviAII CATG 7 cut(s) 46, 118, 443, 676, 826, 1159, 1306
CviQI GTAC 2 cut(s) 784, 912
DdeI CTNAG 5 cut(s) 73, 908, 1011, 1296, 1451
DpnI GATC 9 cut(s) 126, 284, 503, 597, 681, 993, 1190, 1400, 1428
DpnII GATC 9 cut(s) 124, 282, 501, 595, 679, 991, 1188, 1398, 1426
Eam1104I CTCTTC 4 cut(s) 185, 686, 1365, 1431
EarI CTCTTC 4 cut(s) 185, 686, 1365, 1431
EciI GGCGGA 2 cut(s) 161, 602
Ecl136II GAGCTC 4 cut(s) 145, 202, 1351, 1450
Eco130I CCWWGG 3 cut(s) 675, 825, 1207
Eco24I GRGCYC 4 cut(s) 147, 204, 1353, 1452
Eco47I GGWCC 3 cut(s) 109, 276, 788
Eco53kI GAGCTC 4 cut(s) 145, 202, 1351, 1450
Eco88I CYCGRG 1 cut(s) 794
Eco91I GGTNACC 1 cut(s) 1276
EcoICRI GAGCTC 4 cut(s) 145, 202, 1351, 1450
EcoO65I GGTNACC 1 cut(s) 1276
EcoRI GAATTC 1 cut(s) 631
EcoRII CCWGG 1 cut(s) 1132
EcoT14I CCWWGG 3 cut(s) 675, 825, 1207
EcoT38I GRGCYC 4 cut(s) 147, 204, 1353, 1452
ErhI CCWWGG 3 cut(s) 675, 825, 1207
Esp3I CGTCTC 1 cut(s) 308
FaeI CATG 7 cut(s) 49, 121, 446, 679, 829, 1162, 1309
FaqI GGGAC 2 cut(s) 273, 811
FatI CATG 7 cut(s) 45, 117, 442, 675, 825, 1158, 1305
FauI CCCGC 3 cut(s) 221, 1172, 1291
FbaI TGATCA 2 cut(s) 124, 991
FblI GTMKAC 3 cut(s) 216, 267, 1213
Fnu4HI GCNGC 7 cut(s) 175, 226, 258, 406, 415, 650, 822
FokI GGATG 5 cut(s) 119, 244, 440, 1157, 1331
FriOI GRGCYC 4 cut(s) 147, 204, 1353, 1452
Fsp4HI GCNGC 7 cut(s) 175, 226, 258, 406, 415, 650, 822
FspBI CTAG 2 cut(s) 870, 878
FspI TGCGCA 1 cut(s) 447
GlaI GCGC 2 cut(s) 404, 447
GluI GCNGC 7 cut(s) 175, 226, 258, 406, 415, 650, 822
HaeII RGCGCY 1 cut(s) 406
HaeIII GGCC 1 cut(s) 1196
HapII CCGG 7 cut(s) 274, 653, 683, 795, 973, 1026, 1118
HgaI GACGC 2 cut(s) 446, 1118
HhaI GCGC 2 cut(s) 405, 448
Hin1II CATG 7 cut(s) 49, 121, 446, 679, 829, 1162, 1309
Hin6I GCGC 2 cut(s) 403, 446
HinP1I GCGC 2 cut(s) 403, 446
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HinfI GANTC 3 cut(s) 492, 506, 1077
HpaII CCGG 7 cut(s) 274, 653, 683, 795, 973, 1026, 1118
HphI GGTGA 6 cut(s) 175, 337, 487, 700, 1081, 1270
Hpy166II GTNNAC 6 cut(s) 217, 268, 791, 1089, 1150, 1214
Hpy188I TCNGA 4 cut(s) 199, 308, 625, 889
Hpy188III TCNNGA 7 cut(s) 274, 683, 878, 1186, 1306, 1334, 1430
Hpy8I GTNNAC 6 cut(s) 217, 268, 791, 1089, 1150, 1214
Hpy99I CGWCG 2 cut(s) 218, 221
HpyAV CCTTC 7 cut(s) 175, 196, 742, 751, 1331, 1360, 1435
HpyCH4III ACNGT 6 cut(s) 302, 343, 377, 475, 788, 923
HpyCH4V TGCA 6 cut(s) 414, 821, 954, 967, 1150, 1170
HpyF3I CTNAG 5 cut(s) 73, 908, 1011, 1296, 1451
Hsp92II CATG 7 cut(s) 49, 121, 446, 679, 829, 1162, 1309
HspAI GCGC 2 cut(s) 403, 446
Kpn2I TCCGGA 2 cut(s) 273, 682
KroI GCCGGC 1 cut(s) 652
KroNI GCCGGC 1 cut(s) 654
Ksp22I TGATCA 2 cut(s) 124, 991
KspI CCGCGG 1 cut(s) 1287
Kzo9I GATC 9 cut(s) 124, 282, 501, 595, 679, 991, 1188, 1398, 1426
LmnI GCTCC 4 cut(s) 150, 862, 1356, 1447
Lsp1109I GCAGC 6 cut(s) 212, 244, 392, 426, 661, 833
LweI GCATC 3 cut(s) 68, 954, 1309
MaeI CTAG 2 cut(s) 870, 878
MaeIII GTNAC 3 cut(s) 343, 1276, 1376
MalI GATC 9 cut(s) 126, 284, 503, 597, 681, 993, 1190, 1400, 1428
MboI GATC 9 cut(s) 124, 282, 501, 595, 679, 991, 1188, 1398, 1426
MflI RGATCY 2 cut(s) 679, 1188
MhlI GDGCHC 7 cut(s) 147, 204, 528, 1152, 1271, 1353, 1452
MluCI AATT 5 cut(s) 631, 640, 1248, 1383, 1413
MlyI GAGTC 2 cut(s) 501, 515
MroI TCCGGA 2 cut(s) 273, 682
MroNI GCCGGC 1 cut(s) 652
MseI TTAA 2 cut(s) 546, 1259
MslI CAYNNNNRTG 1 cut(s) 1157
MspA1I CMGCKG 2 cut(s) 417, 1286
MspI CCGG 7 cut(s) 274, 653, 683, 795, 973, 1026, 1118
MspR9I CCNGG 6 cut(s) 795, 796, 974, 1027, 1118, 1134
MvaI CCWGG 1 cut(s) 1134
MvnI CGCG 1 cut(s) 1286
NaeI GCCGGC 1 cut(s) 654
NciI CCSGG 5 cut(s) 795, 796, 974, 1027, 1118
NcoI CCATGG 2 cut(s) 675, 825
NdeII GATC 9 cut(s) 124, 282, 501, 595, 679, 991, 1188, 1398, 1426
NgoMIV GCCGGC 1 cut(s) 652
NlaIII CATG 7 cut(s) 49, 121, 446, 679, 829, 1162, 1309
NlaIV GGNNCC 2 cut(s) 321, 681
NmeAIII GCCGAG 3 cut(s) 286, 304, 562
NmuCI GTSAC 2 cut(s) 343, 1276
NsbI TGCGCA 1 cut(s) 447
NspI RCATGY 2 cut(s) 49, 1162
PagI TCATGA 1 cut(s) 1305
PciI ACATGT 1 cut(s) 1158
PcsI WCGNNNNNNNCGW 1 cut(s) 534
PdiI GCCGGC 1 cut(s) 654
PfeI GAWTC 1 cut(s) 1077
PkrI GCNGC 7 cut(s) 176, 227, 259, 407, 416, 651, 823
PleI GAGTC 2 cut(s) 500, 514
PpsI GAGTC 2 cut(s) 500, 514
PscI ACATGT 1 cut(s) 1158
PsiI TTATAA 1 cut(s) 744
Psp124BI GAGCTC 4 cut(s) 147, 204, 1353, 1452
Psp6I CCWGG 1 cut(s) 1132
PspEI GGTNACC 1 cut(s) 1276
PspGI CCWGG 1 cut(s) 1132
PspN4I GGNNCC 2 cut(s) 321, 681
PspPI GGNCC 3 cut(s) 109, 276, 788
PsuI RGATCY 2 cut(s) 679, 1188
RsaI GTAC 2 cut(s) 785, 913
RsaNI GTAC 2 cut(s) 784, 912
RseI CAYNNNNRTG 1 cut(s) 1157
SacI GAGCTC 4 cut(s) 147, 204, 1353, 1452
SacII CCGCGG 1 cut(s) 1287
SalI GTCGAC 1 cut(s) 215
SaqAI TTAA 2 cut(s) 546, 1259
SatI GCNGC 7 cut(s) 175, 226, 258, 406, 415, 650, 822
Sau3AI GATC 9 cut(s) 124, 282, 501, 595, 679, 991, 1188, 1398, 1426
Sau96I GGNCC 3 cut(s) 109, 276, 788
ScaI AGTACT 1 cut(s) 913
SchI GAGTC 2 cut(s) 501, 515
ScrFI CCNGG 6 cut(s) 795, 796, 974, 1027, 1118, 1134
SduI GDGCHC 7 cut(s) 147, 204, 528, 1152, 1271, 1353, 1452
SfaNI GCATC 3 cut(s) 68, 954, 1309
SfcI CTRYAG 1 cut(s) 574
Sfr303I CCGCGG 1 cut(s) 1287
SgrBI CCGCGG 1 cut(s) 1287
SgrDI CGTCGACG 1 cut(s) 215
SinI GGWCC 3 cut(s) 109, 276, 788
SmaI CCCGGG 1 cut(s) 796
SmiMI CAYNNNNRTG 1 cut(s) 1157
SmlI CTYRAG 1 cut(s) 839
SmoI CTYRAG 1 cut(s) 839
SpeI ACTAGT 1 cut(s) 869
Sse9I AATT 5 cut(s) 631, 640, 1248, 1383, 1413
SspMI CTAG 2 cut(s) 870, 878
SstI GAGCTC 4 cut(s) 147, 204, 1353, 1452
StyD4I CCNGG 6 cut(s) 793, 794, 972, 1025, 1116, 1132
StyI CCWWGG 3 cut(s) 675, 825, 1207
TaaI ACNGT 6 cut(s) 302, 343, 377, 475, 788, 923
TaqI TCGA 8 cut(s) 216, 381, 504, 528, 939, 1138, 1335, 1401
TasI AATT 5 cut(s) 631, 640, 1248, 1383, 1413
TatI WGTACW 1 cut(s) 911
TauI GCSGC 1 cut(s) 177
TfiI GAWTC 1 cut(s) 1077
Tru1I TTAA 2 cut(s) 546, 1259
Tru9I TTAA 2 cut(s) 546, 1259
TscAI CASTG 1 cut(s) 961
TseFI GTSAC 2 cut(s) 343, 1276
TseI GCWGC 6 cut(s) 225, 257, 405, 414, 649, 821
Tsp45I GTSAC 2 cut(s) 343, 1276
TspDTI ATGAA 4 cut(s) 88, 1294, 1407, 1449
TspGWI ACGGA 2 cut(s) 101, 588
TspMI CCCGGG 1 cut(s) 794
TspRI CASTG 1 cut(s) 961
VneI GTGCAC 1 cut(s) 1148
VpaK11BI GGWCC 3 cut(s) 109, 276, 788
XapI RAATTY 3 cut(s) 631, 640, 1413
XbaI TCTAGA 1 cut(s) 877
XceI RCATGY 2 cut(s) 49, 1162
XmaI CCCGGG 1 cut(s) 794
XmiI GTMKAC 3 cut(s) 216, 267, 1213
XspI CTAG 2 cut(s) 870, 878
ZrmI AGTACT 1 cut(s) 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.