Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0000471

Physical Location & Seq

Genomic Coordinates Reverse (-)

11749479 .. 11751501

Gene Structure 2023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1141400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGTTTTCTCTCAATAATCTGAAAGAAATGCCCCCCACAGCGTCGTCTCTGTTCTCAGCCTACGCCTCCGTCGCCGGATCCATGATGCTGGTCCGCTCCATGGCCAACGACCTCCTCCCGCCGCCCCTCCGCTCATACATTTCCTCCAAACTCTCTTACCTTTTCACCCCCCTCTCCTCCATAACTCTTGTCATCGAAGAGTACTCCGGCGCTGCCTGCAACCAGGTCTACCAGGCCGCCGAGGTCTACCTTCCGACCATCAACATCAGCCCTTCTACCAAAAGCTTCCGTGTCCGAAAAACAAACCGGCAGAGGAGCATCAGCCGCGCCATGGACAAAAACCAGCAAGTCGCCGACACCTTCGAGAACGTCGATCTGACATGGCAGTACACGGTGACGGAGAATAAAAAGCACGGGAACACACATCAGTTCGAGCTCAGCTTCCACAGGAAGCACAGGGACAAAGTGATAGGGTCCTACTTGCCGTACGTGCTTGCTAGGGCTGACGCCATCAAAGAAGAGGAAAAGGTTGTGAAGCTTTACTCCAGCCATTTGTGCTCCGAGTACGATCGTTCGTACAGCAAGAGGAAATGGGGTTCGGTGAATCTGGAGCACCCGTCGACGTTCGACACGGTGGCGATGGAACCGGAGATGAAGAAGATGATTGTGGAGGATTTGGACAGGTTTGTGAGGAGGAAGGAGTTTTATAAGAAGGTTGGGAAGGCATGGAAAAGGGGTTACTTGCTGTACGGTCCACCGGGAACGGGAAAATCGAGCTTGATCGCCGCCATGGCTAATTATCTCAGGTTTGATGTGTATGATTTGGAGCTCAGTGGCGTTCAGAACAACAGTGATTTGAGGAAGCTGTTGTTGTCCACCACGAATCGTTCGATTTTGGTGATTGAGGATATCGATTGCACTGTGGATTTGCAGAACCGGGATAACTGGGAGGATAAGTCTCAAGACCCTACACGTTCTACTTCTAACAAGTTGACGCTTTCGGGGCTACTGAATTTCATCGATGGTTTGTGGTCGAGTTGTGGCGACGAGAGAATTATCGTGTTTACGACCAACCACAAGGATCGGTTAGACCCTGCATTGTTACGTCCGGGGCGAATGGACGTGCACATTCACATGTCATACTGCACTCCAAGTGGATTCAAGGTCTTGGCTTCTAATTACCTCGATATTCATGAGGACAACCTTCATAGTCTTTGCGGGGAAGTCGAAGGGTTGATCAAGAGCACAGAGGTGACCCCTGCAGAGGTTGCTGAAGAGCTCATGAAAAGCGACGATGCTGATGTTGCCCTCGGAGGACTTGTCAATTTTCTCAAACGTAAGAGGATCGAGAGCGAAAAAAGAAAGGAGGAGGAGGAGGCCAGAAAAGCGAAGAGGCCGAAAACGGATCACAATGCCAGTGATGAAGGTGAAGCAGTAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

481

Amino Acids

54.56

Weight (kDa)

6.88

Isoelectric Point (pI)

47.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	39 - 131	3.4e-20	Domain associated at C-terminal with AAA
AAA	PF00004	247 - 380	8.1e-20	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	382 - 455	4.5e-23	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000471)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18190 AT2G18193
fragaria_vesca	FvH4_1g12130 FvH4_1g12690 FvH4_1g12700 FvH4_1g12712 FvH4_1g12716 FvH4_1g12731
malus_domestica	MD02G1141300.v1.1 MD02G1141400.v1.1 MD02G1141600.v1.1 MD02G1141800.v1.1 MD02G1142200.v1.1 MD15G1254200.v1.1
prunus_persica	Prupe.7G159500_v2.0.a1 Prupe.7G159600_v2.0.a1 Prupe.7G165500_v2.0.a1
pyrus_communis	pycom02g11130 pycom02g11150 pycom02g11160 pycom02g11180 pycom15g22350
rosa_chinensis	RchiOBHm_Chr2g0099791 RchiOBHm_Chr2g0099801 RchiOBHm_Chr2g0100651 RchiOBHm_Chr2g0100681 RchiOBHm_Chr2g0100691 RchiOBHm_Chr2g0100701 RchiOBHm_Chr2g0100721 RchiOBHm_Chr2g0100801 RchiOBHm_Chr3g0459141
rosa_laevigata	RLG00000016914 RLG00000016915 RLG00000016997 RLG00000016998 RLG00000017000 RLG00000017002 RLG00000017012 RLG00000025114
rosa_multiflora	Rmu_co8416275.1_g000001 Rmu_sc0001187.1_g000004 Rmu_sc0001497.1_g000006 Rmu_sc0001659.1_g000004 Rmu_sc0001659.1_g000006 Rmu_sc0001659.1_g000008 Rmu_sc0001659.1_g000010 Rmu_sc0008864.1_g000008 Rmu_sc0028022.1_g000001
rosa_roxburghii	Rroxscaffold_2G00141850 Rroxscaffold_2G00141930 Rroxscaffold_2G00141940 Rroxscaffold_2G00141950 Rroxscaffold_2G00141960 Rroxscaffold_2G00141970
rosa_rugosa	Rorug02G0091800 Rorug02G0091800 Rorug02G0091800 Rorug02G0091900 Rorug02G0092900 Rorug03G0033500
rosa_samantha	Rh2BG135600 Rh2BG143900 Rh2BG144000 Rh2BG144200 Rh2BG144300 Rh2BG144400 Rh2BG144500 Rh2BG145500 Rh2CG136900 Rh2CG137000 Rh2CG144800 Rh2CG145000 Rh2CG145100 Rh2CG145200 Rh2CG145500 Rh2CG146400 Rh2DG137400 Rh2DG137500 Rh2DG144300 Rh2DG144500 Rh2DG144600 Rh2DG144700 Rh2DG145000 Rh2DG145900 Rh3BG094700 Rh3DG095300
rosa_wichuraiana	Rw2G010920 Rw2G010950 Rw2G010990 Rw3G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	708
AccBSI	CCGCTC	2 cut(s)	96, 132
AccI	GTMKAC	3 cut(s)	228, 246, 620
AccII	CGCG	1 cut(s)	327
AciI	CCGC	8 cut(s)	94, 119, 122, 130, 237, 325, 786, 1218
AclWI	GGATC	5 cut(s)	72, 85, 1089, 1352, 1413
AcoI	YGGCCR	1 cut(s)	102
AcsI	RAATTY	1 cut(s)	1012
AcuI	CTGAAG	1 cut(s)	1293
AcyI	GRCGYC	1 cut(s)	507
AfaI	GTAC	6 cut(s)	203, 389, 488, 566, 578, 749
AfiI	CCNNNNNNNGG	4 cut(s)	100, 331, 764, 1264
AflIII	ACRYGT	2 cut(s)	971, 1134
AgsI	TTSAA	1 cut(s)	1162
AjiI	CACGTC	1 cut(s)	1123
AjnI	CCWGG	2 cut(s)	222, 231
AleI	CACNNNNGTG	1 cut(s)	1250
AloI	GAACNNNNNNTCC	2 cut(s)	580, 612
AluBI	AGCT	8 cut(s)	285, 436, 441, 538, 777, 829, 865, 1279
AluI	AGCT	8 cut(s)	285, 436, 441, 538, 777, 829, 865, 1279
Alw21I	GWGCWC	7 cut(s)	438, 560, 615, 831, 1128, 1247, 1281
Alw26I	GTCTC	2 cut(s)	51, 963
Alw44I	GTGCAC	1 cut(s)	1124
AlwI	GGATC	5 cut(s)	72, 85, 1089, 1352, 1413
AoxI	GGCC	4 cut(s)	102, 234, 1377, 1394
ApaLI	GTGCAC	1 cut(s)	1124
ApeKI	GCWGC	1 cut(s)	212
ApoI	RAATTY	1 cut(s)	1012
AspLEI	GCGC	2 cut(s)	212, 329
AspS9I	GGNCC	3 cut(s)	91, 474, 752
AsuC2I	CCSGG	3 cut(s)	759, 938, 1110
AsuHPI	GGTGA	6 cut(s)	157, 406, 613, 910, 1264, 1439
AvaII	GGWCC	3 cut(s)	91, 474, 752
BaeGI	GKGCMC	1 cut(s)	1128
BalI	TGGCCA	1 cut(s)	104
BamHI	GGATCC	1 cut(s)	77
BanII	GRGCYC	3 cut(s)	438, 831, 1281
Bbv12I	GWGCWC	7 cut(s)	438, 560, 615, 831, 1128, 1247, 1281
BbvI	GCAGC	1 cut(s)	199
BccI	CCATC	4 cut(s)	266, 518, 634, 1016
BceAI	ACGGC	1 cut(s)	469
BciT130I	CCWGG	2 cut(s)	224, 233
BclI	TGATCA	1 cut(s)	1236
BcnI	CCSGG	3 cut(s)	759, 938, 1110
BcoDI	GTCTC	2 cut(s)	51, 963
BfaI	CTAG	1 cut(s)	498
BfmI	CTRYAG	1 cut(s)	1260
BfoI	RGCGCY	1 cut(s)	213
BglI	GCCNNNNNGGC	1 cut(s)	791
BisI	GCNGC	5 cut(s)	122, 213, 237, 325, 786
BlpI	GCTNAGC	1 cut(s)	437
BlsI	GCNGC	5 cut(s)	123, 214, 238, 326, 787
BmcAI	AGTACT	1 cut(s)	203
Bme1390I	CCNGG	5 cut(s)	224, 233, 759, 938, 1110
Bme18I	GGWCC	3 cut(s)	91, 474, 752
BmgBI	CACGTC	1 cut(s)	1123
BmgT120I	GGNCC	3 cut(s)	91, 474, 752
BmiI	GGNNCC	3 cut(s)	79, 475, 645
BmrFI	CCNGG	5 cut(s)	224, 233, 759, 938, 1110
BmrI	ACTGGG	1 cut(s)	955
BmsI	GCATC	3 cut(s)	75, 327, 1285
BmuI	ACTGGG	1 cut(s)	955
BpmI	CTGGAG	2 cut(s)	529, 629
Bpu1102I	GCTNAGC	1 cut(s)	437
BpuEI	CTTGAG	1 cut(s)	945
BpuMI	CCSGG	3 cut(s)	759, 938, 1110
Bsa29I	ATCGAT	2 cut(s)	912, 1020
BsaAI	YACGTR	1 cut(s)	490
BsaHI	GRCGYC	1 cut(s)	507
BsaJI	CCNNGG	6 cut(s)	99, 240, 330, 789, 1109, 1309
BsaWI	WCCGGW	1 cut(s)	646
BsaXI	ACNNNNNCTCC	8 cut(s)	128, 158, 602, 632, 941, 971, 1305, 1335
Bsc4I	CCNNNNNNNGG	4 cut(s)	100, 331, 764, 1264
Bse118I	RCCGGY	1 cut(s)	306
Bse1I	ACTGG	2 cut(s)	950, 1416
BseBI	CCWGG	2 cut(s)	224, 233
BseCI	ATCGAT	2 cut(s)	912, 1020
BseDI	CCNNGG	6 cut(s)	99, 240, 330, 789, 1109, 1309
BseLI	CCNNNNNNNGG	4 cut(s)	100, 331, 764, 1264
BseMII	CTCAG	4 cut(s)	69, 451, 817, 844
BseNI	ACTGG	2 cut(s)	950, 1416
BseRI	GAGGAG	7 cut(s)	104, 166, 328, 706, 1382, 1385, 1388
BseSI	GKGCMC	1 cut(s)	1128
BseXI	GCAGC	1 cut(s)	199
BsgI	GTGCAG	1 cut(s)	1129
Bsh1236I	CGCG	1 cut(s)	327
Bsh1285I	CGRYCG	1 cut(s)	571
BshFI	GGCC	4 cut(s)	104, 236, 1379, 1396
BshVI	ATCGAT	2 cut(s)	912, 1020
BsiEI	CGRYCG	1 cut(s)	571
BsiHKAI	GWGCWC	7 cut(s)	438, 560, 615, 831, 1128, 1247, 1281
BsiSI	CCGG	7 cut(s)	75, 207, 307, 647, 758, 937, 1109
BsiWI	CGTACG	1 cut(s)	486
BslFI	GGGAC	1 cut(s)	473
BslI	CCNNNNNNNGG	4 cut(s)	100, 331, 764, 1264
BsmAI	GTCTC	2 cut(s)	51, 963
BsmBI	CGTCTC	1 cut(s)	51
BsmFI	GGGAC	1 cut(s)	473
BsnI	GGCC	4 cut(s)	104, 236, 1379, 1396
Bsp1286I	GDGCHC	7 cut(s)	438, 560, 615, 831, 1128, 1247, 1281
Bsp143I	GATC	8 cut(s)	77, 373, 568, 780, 1081, 1236, 1344, 1405
Bsp1720I	GCTNAGC	1 cut(s)	437
Bsp19I	CCATGG	3 cut(s)	99, 330, 789
BspACI	CCGC	8 cut(s)	94, 119, 122, 130, 237, 325, 786, 1218
BspANI	GGCC	4 cut(s)	104, 236, 1379, 1396
BspCNI	CTCAG	4 cut(s)	68, 450, 816, 843
BspDI	ATCGAT	2 cut(s)	912, 1020
BspFNI	CGCG	1 cut(s)	327
BspHI	TCATGA	2 cut(s)	1192, 1281
BspLI	GGNNCC	3 cut(s)	79, 475, 645
BspMAI	CTGCAG	1 cut(s)	1264
BspPI	GGATC	5 cut(s)	72, 85, 1089, 1352, 1413
BspQI	GCTCTTC	1 cut(s)	1269
BsrBI	CCGCTC	2 cut(s)	96, 132
BsrFI	RCCGGY	1 cut(s)	306
BsrI	ACTGG	2 cut(s)	950, 1416
BssAI	RCCGGY	1 cut(s)	306
BssECI	CCNNGG	6 cut(s)	99, 240, 330, 789, 1109, 1309
BssMI	GATC	8 cut(s)	77, 373, 568, 780, 1081, 1236, 1344, 1405
BssNI	GRCGYC	1 cut(s)	507
BssT1I	CCWWGG	3 cut(s)	99, 330, 789
Bst2UI	CCWGG	2 cut(s)	224, 233
Bst4CI	ACNGT	5 cut(s)	394, 634, 752, 851, 922
Bst6I	CTCTTC	4 cut(s)	192, 513, 1269, 1385
BstACI	GRCGYC	1 cut(s)	507
BstAPI	GCANNNNNTGC	1 cut(s)	1268
BstBAI	YACGTR	1 cut(s)	490
BstC8I	GCNNGC	2 cut(s)	217, 495
BstDEI	CTNAG	4 cut(s)	55, 437, 803, 830
BstDSI	CCRYGG	3 cut(s)	99, 330, 789
BstEII	GGTNACC	1 cut(s)	1252
BstFNI	CGCG	1 cut(s)	327
BstH2I	RGCGCY	1 cut(s)	213
BstHHI	GCGC	2 cut(s)	212, 329
BstKTI	GATC	8 cut(s)	80, 376, 571, 783, 1084, 1239, 1347, 1408
BstMAI	GTCTC	2 cut(s)	51, 963
BstMBI	GATC	8 cut(s)	77, 373, 568, 780, 1081, 1236, 1344, 1405
BstMCI	CGRYCG	1 cut(s)	571
BstNI	CCWGG	2 cut(s)	224, 233
BstNSI	RCATGY	1 cut(s)	1138
BstPI	GGTNACC	1 cut(s)	1252
BstSCI	CCNGG	5 cut(s)	222, 231, 757, 936, 1108
BstSFI	CTRYAG	1 cut(s)	1260
BstSLI	GKGCMC	1 cut(s)	1128
BstUI	CGCG	1 cut(s)	327
BstV1I	GCAGC	1 cut(s)	199
BstX2I	RGATCY	1 cut(s)	77
BstXI	CCANNNNNNTGG	1 cut(s)	88
BstYI	RGATCY	1 cut(s)	77
Bsu15I	ATCGAT	2 cut(s)	912, 1020
BsuRI	GGCC	4 cut(s)	104, 236, 1379, 1396
BsuTUI	ATCGAT	2 cut(s)	912, 1020
BtgI	CCRYGG	3 cut(s)	99, 330, 789
BtgZI	GCGATG	1 cut(s)	653
BtrI	CACGTC	1 cut(s)	1123
BtsIMutI	CAGTG	4 cut(s)	838, 856, 918, 1423
Cac8I	GCNNGC	2 cut(s)	217, 495
CciI	TCATGA	2 cut(s)	1192, 1281
CfoI	GCGC	2 cut(s)	212, 329
Cfr10I	RCCGGY	1 cut(s)	306
Cfr13I	GGNCC	3 cut(s)	91, 474, 752
ClaI	ATCGAT	2 cut(s)	912, 1020
CseI	GACGC	3 cut(s)	30, 515, 1003
CsiI	ACCWGGT	1 cut(s)	222
Csp6I	GTAC	6 cut(s)	202, 388, 487, 565, 577, 748
CviAII	CATG	9 cut(s)	82, 100, 331, 381, 726, 790, 1135, 1193, 1282
CviQI	GTAC	6 cut(s)	202, 388, 487, 565, 577, 748
DdeI	CTNAG	4 cut(s)	55, 437, 803, 830
DpnI	GATC	8 cut(s)	79, 375, 570, 782, 1083, 1238, 1346, 1407
DpnII	GATC	8 cut(s)	77, 373, 568, 780, 1081, 1236, 1344, 1405
EaeI	YGGCCR	1 cut(s)	102
Eam1104I	CTCTTC	4 cut(s)	192, 513, 1269, 1385
EarI	CTCTTC	4 cut(s)	192, 513, 1269, 1385
Ecl136II	GAGCTC	3 cut(s)	436, 829, 1279
Eco130I	CCWWGG	3 cut(s)	99, 330, 789
Eco24I	GRGCYC	3 cut(s)	438, 831, 1281
Eco32I	GATATC	1 cut(s)	910
Eco47I	GGWCC	3 cut(s)	91, 474, 752
Eco53kI	GAGCTC	3 cut(s)	436, 829, 1279
Eco57I	CTGAAG	1 cut(s)	1293
Eco91I	GGTNACC	1 cut(s)	1252
EcoICRI	GAGCTC	3 cut(s)	436, 829, 1279
EcoO109I	RGGNCCY	1 cut(s)	474
EcoO65I	GGTNACC	1 cut(s)	1252
EcoRII	CCWGG	2 cut(s)	222, 231
EcoRV	GATATC	1 cut(s)	910
EcoT14I	CCWWGG	3 cut(s)	99, 330, 789
EcoT38I	GRGCYC	3 cut(s)	438, 831, 1281
ErhI	CCWWGG	3 cut(s)	99, 330, 789
Esp3I	CGTCTC	1 cut(s)	51
FaeI	CATG	9 cut(s)	85, 103, 334, 384, 729, 793, 1138, 1196, 1285
FaqI	GGGAC	1 cut(s)	473
FatI	CATG	9 cut(s)	81, 99, 330, 380, 725, 789, 1134, 1192, 1281
FauI	CCCGC	2 cut(s)	126, 1211
FbaI	TGATCA	1 cut(s)	1236
FblI	GTMKAC	3 cut(s)	228, 246, 620
Fnu4HI	GCNGC	5 cut(s)	122, 213, 237, 325, 786
FriOI	GRGCYC	3 cut(s)	438, 831, 1281
Fsp4HI	GCNGC	5 cut(s)	122, 213, 237, 325, 786
FspBI	CTAG	1 cut(s)	498
GlaI	GCGC	2 cut(s)	211, 328
GluI	GCNGC	5 cut(s)	122, 213, 237, 325, 786
GsuI	CTGGAG	2 cut(s)	529, 629
HaeII	RGCGCY	1 cut(s)	213
HaeIII	GGCC	4 cut(s)	104, 236, 1379, 1396
HapII	CCGG	7 cut(s)	75, 207, 307, 647, 758, 937, 1109
HgaI	GACGC	3 cut(s)	30, 515, 1003
HhaI	GCGC	2 cut(s)	212, 329
Hin1I	GRCGYC	1 cut(s)	507
Hin1II	CATG	9 cut(s)	85, 103, 334, 384, 729, 793, 1138, 1196, 1285
Hin6I	GCGC	2 cut(s)	210, 327
HinP1I	GCGC	2 cut(s)	210, 327
HincII	GTYRAC	2 cut(s)	621, 993
HindII	GTYRAC	2 cut(s)	621, 993
HindIII	AAGCTT	2 cut(s)	283, 536
HinfI	GANTC	3 cut(s)	604, 883, 1158
HpaII	CCGG	7 cut(s)	75, 207, 307, 647, 758, 937, 1109
HphI	GGTGA	6 cut(s)	157, 406, 613, 910, 1264, 1439
Hpy166II	GTNNAC	9 cut(s)	229, 247, 390, 621, 755, 876, 993, 1065, 1126
Hpy188I	TCNGA	7 cut(s)	21, 255, 296, 378, 562, 843, 1313
Hpy188III	TCNNGA	7 cut(s)	364, 608, 962, 1193, 1240, 1282, 1348
Hpy8I	GTNNAC	9 cut(s)	229, 247, 390, 621, 755, 876, 993, 1065, 1126
Hpy99I	CGWCG	7 cut(s)	46, 74, 374, 622, 625, 1049, 1295
HpyAV	CCTTC	9 cut(s)	260, 282, 370, 691, 706, 715, 1214, 1223, 1418
HpyCH4III	ACNGT	5 cut(s)	394, 634, 752, 851, 922
HpyCH4IV	ACGT	7 cut(s)	369, 489, 623, 973, 1105, 1122, 1336
HpyCH4V	TGCA	7 cut(s)	219, 918, 931, 1097, 1126, 1146, 1262
HpyF3I	CTNAG	4 cut(s)	55, 437, 803, 830
HpySE526I	ACGT	7 cut(s)	369, 489, 623, 973, 1105, 1122, 1336
Hsp92I	GRCGYC	1 cut(s)	507
Hsp92II	CATG	9 cut(s)	85, 103, 334, 384, 729, 793, 1138, 1196, 1285
HspAI	GCGC	2 cut(s)	210, 327
Ksp22I	TGATCA	1 cut(s)	1236
Kzo9I	GATC	8 cut(s)	77, 373, 568, 780, 1081, 1236, 1344, 1405
LguI	GCTCTTC	1 cut(s)	1269
LmnI	GCTCC	5 cut(s)	101, 315, 563, 610, 826
Lsp1109I	GCAGC	1 cut(s)	199
LweI	GCATC	3 cut(s)	75, 327, 1285
MabI	ACCWGGT	1 cut(s)	222
MaeI	CTAG	1 cut(s)	498
MaeII	ACGT	7 cut(s)	369, 489, 623, 973, 1105, 1122, 1336
MaeIII	GTNAC	4 cut(s)	394, 737, 1101, 1252
MalI	GATC	8 cut(s)	79, 375, 570, 782, 1083, 1238, 1346, 1407
MbiI	CCGCTC	2 cut(s)	96, 132
MboI	GATC	8 cut(s)	77, 373, 568, 780, 1081, 1236, 1344, 1405
MboII	GAAGA	6 cut(s)	209, 530, 667, 670, 1286, 1402
MflI	RGATCY	1 cut(s)	77
MhlI	GDGCHC	7 cut(s)	438, 560, 615, 831, 1128, 1247, 1281
MlsI	TGGCCA	1 cut(s)	104
MluCI	AATT	5 cut(s)	796, 1012, 1053, 1177, 1324
MluNI	TGGCCA	1 cut(s)	104
MmeI	TCCRAC	1 cut(s)	278
Mox20I	TGGCCA	1 cut(s)	104
MscI	TGGCCA	1 cut(s)	104
MslI	CAYNNNNRTG	2 cut(s)	1133, 1250
Msp20I	TGGCCA	1 cut(s)	104
MspI	CCGG	7 cut(s)	75, 207, 307, 647, 758, 937, 1109
MspR9I	CCNGG	5 cut(s)	224, 233, 759, 938, 1110
MvaI	CCWGG	2 cut(s)	224, 233
MvnI	CGCG	1 cut(s)	327
NciI	CCSGG	3 cut(s)	759, 938, 1110
NcoI	CCATGG	3 cut(s)	99, 330, 789
NdeII	GATC	8 cut(s)	77, 373, 568, 780, 1081, 1236, 1344, 1405
NlaIII	CATG	9 cut(s)	85, 103, 334, 384, 729, 793, 1138, 1196, 1285
NlaIV	GGNNCC	3 cut(s)	79, 475, 645
NmeAIII	GCCGAG	1 cut(s)	265
NmuCI	GTSAC	2 cut(s)	394, 1252
NspI	RCATGY	1 cut(s)	1138
OliI	CACNNNNGTG	1 cut(s)	1250
PagI	TCATGA	2 cut(s)	1192, 1281
PciI	ACATGT	1 cut(s)	1134
PciSI	GCTCTTC	1 cut(s)	1269
PcsI	WCGNNNNNNNCGW	4 cut(s)	369, 770, 887, 1111
PfeI	GAWTC	3 cut(s)	604, 883, 1158
Pfl23II	CGTACG	1 cut(s)	486
PkrI	GCNGC	5 cut(s)	123, 214, 238, 326, 787
Ple19I	CGATCG	1 cut(s)	571
Ppu21I	YACGTR	1 cut(s)	490
PpuMI	RGGWCCY	1 cut(s)	474
PscI	ACATGT	1 cut(s)	1134
PsiI	TTATAA	1 cut(s)	708
Psp124BI	GAGCTC	3 cut(s)	438, 831, 1281
Psp5II	RGGWCCY	1 cut(s)	474
Psp6I	CCWGG	2 cut(s)	222, 231
PspEI	GGTNACC	1 cut(s)	1252
PspGI	CCWGG	2 cut(s)	222, 231
PspLI	CGTACG	1 cut(s)	486
PspN4I	GGNNCC	3 cut(s)	79, 475, 645
PspPI	GGNCC	3 cut(s)	91, 474, 752
PspPPI	RGGWCCY	1 cut(s)	474
PstI	CTGCAG	1 cut(s)	1264
PsuI	RGATCY	1 cut(s)	77
PvuI	CGATCG	1 cut(s)	571
RsaI	GTAC	6 cut(s)	203, 389, 488, 566, 578, 749
RsaNI	GTAC	6 cut(s)	202, 388, 487, 565, 577, 748
RseI	CAYNNNNRTG	2 cut(s)	1133, 1250
SacI	GAGCTC	3 cut(s)	438, 831, 1281
SalI	GTCGAC	1 cut(s)	619
SapI	GCTCTTC	1 cut(s)	1269
SatI	GCNGC	5 cut(s)	122, 213, 237, 325, 786
Sau3AI	GATC	8 cut(s)	77, 373, 568, 780, 1081, 1236, 1344, 1405
Sau96I	GGNCC	3 cut(s)	91, 474, 752
ScaI	AGTACT	1 cut(s)	203
ScrFI	CCNGG	5 cut(s)	224, 233, 759, 938, 1110
SduI	GDGCHC	7 cut(s)	438, 560, 615, 831, 1128, 1247, 1281
SexAI	ACCWGGT	1 cut(s)	222
SfaNI	GCATC	3 cut(s)	75, 327, 1285
SfcI	CTRYAG	1 cut(s)	1260
SgrDI	CGTCGACG	1 cut(s)	619
SinI	GGWCC	3 cut(s)	91, 474, 752
SmiMI	CAYNNNNRTG	2 cut(s)	1133, 1250
SmlI	CTYRAG	1 cut(s)	960
SmoI	CTYRAG	1 cut(s)	960
Sse9I	AATT	5 cut(s)	796, 1012, 1053, 1177, 1324
SsiI	CCGC	8 cut(s)	94, 119, 122, 130, 237, 325, 786, 1218
SspMI	CTAG	1 cut(s)	498
SstI	GAGCTC	3 cut(s)	438, 831, 1281
StyD4I	CCNGG	5 cut(s)	222, 231, 757, 936, 1108
StyI	CCWWGG	3 cut(s)	99, 330, 789
TaaI	ACNGT	5 cut(s)	394, 634, 752, 851, 922
TaiI	ACGT	7 cut(s)	372, 492, 626, 976, 1108, 1125, 1339
TasI	AATT	5 cut(s)	796, 1012, 1053, 1177, 1324
TatI	WGTACW	2 cut(s)	201, 387
TauI	GCSGC	4 cut(s)	124, 239, 327, 788
TfiI	GAWTC	3 cut(s)	604, 883, 1158
TscAI	CASTG	4 cut(s)	838, 856, 925, 1423
TseFI	GTSAC	2 cut(s)	394, 1252
TseI	GCWGC	1 cut(s)	212
Tsp45I	GTSAC	2 cut(s)	394, 1252
TspDTI	ATGAA	6 cut(s)	668, 1006, 1181, 1196, 1298, 1437
TspGWI	ACGGA	4 cut(s)	58, 278, 413, 1418
TspRI	CASTG	4 cut(s)	838, 856, 925, 1423
VneI	GTGCAC	1 cut(s)	1124
VpaK11BI	GGWCC	3 cut(s)	91, 474, 752
XapI	RAATTY	1 cut(s)	1012
XceI	RCATGY	1 cut(s)	1138
XmiI	GTMKAC	3 cut(s)	228, 246, 620
XspI	CTAG	1 cut(s)	498
ZrmI	AGTACT	1 cut(s)	203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.