FvH4_2g14750

alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
12938966 .. 12942414
3449 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g14750.t2

Sequence Viewer

Length: 1143 bp
ATGTTTGACACTGCTGGCAAGGTTATCAAGTGCAAAGCTGCGGTTGCCTGGGAAGCTGGGAAGCCGCTGGTAATTGAGGAAGTGGAGGTGGCACCACCCCAGAAACATGAAGTCCGATTGAAGATCCTCTTCACTGCCCTGTGCCACACTGATGTATACTTCTGGGAAGCAAAGGGACAAAATCCACTGTTCCCTCGGATTTTAGGTCATGAAGCTGGAGGAATTGTGGAAAGCGTAGGCGAGGGTGTAACTGAACTCCAACCGGGAGACCATGTCCTCCCAGTGTTCACTGGAGAGTGCAAGGAGTGCACACATTGTAAGTCAGAGGAAAGCAACATGTGTGATCTCCTAAGGATCAATACCGATAGGGGTACTATGCTTAGTGATGGCAAAACCAGGTTTTCCAAGGATGGAAAGCCAATTTATCACTTTGTTGGTACCTCTACATTCAGTGAATACACTGTTTCACATGTTGGTTCCATTGCGAAGATCAACCCTGCAGCACCTCTTGACAAAGTTTGTGTTCTTAGTTGTGGAATTTGTACAGGTTTCGGTGCCACTGTAAATGTTGCAAAGCCAAAAAAGGGTTCATCTGTTGCCATTTTCGGATTGGGTGCTGTTGGTCTTGCTGCTGCTGAAGGTGCAAGGGTTTCAGGGGCTTCAAGGATCATTGGAGTTGATCTCAACTCCAACCGATTTGAGGAAGCCAAGAAGTTTGGGGTGAATGAATTTGTGAATCCAAAAGATCATAAGAAACCTGTTCAGGAGGTGATAGCTGAGATGACTAATGGTGGAGTTGATAGGAGTGTCGAGTGCACTGGAAGCATCCAGGCTATGATCTCTGCCTTTGAATGTGTTCATGATGGATGGGGGGTTGCTGTACTTGTTGGAGTGCCAAACAAAGATGATGCGTTCAAAACCCATCCGATGAACTTTTTGAACGAGAGGACTCTTAAGGGTACTTTTTATGGTAACTACAAGCCCCGCACTGACCTCCCTGGTGTTGTGGAGAAGTACATGAACAAGGAGCTGGAATTGGACAAATTCATCACTCACTCTGTTCCTTTCTCTGAGATCAACAAGGCATTCGACTACATGCTGGCAGGAGAAGGAATCCGGTGCATCATCCGCATGGAGCATTAG

Protein Analysis

381

Amino Acids

41.33

Weight (kDa)

6.33

Isoelectric Point (pI)

30.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_zinc_N PF00107 94 - 225 4.7e-27 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 437
AccB1I GGYRCC 3 cut(s) 91, 437, 554
AccI GTMKAC 1 cut(s) 156
AciI CCGC 4 cut(s) 41, 65, 985, 1129
AclWI GGATC 3 cut(s) 118, 362, 674
AcsI RAATTY 3 cut(s) 537, 728, 1043
AcuI CTGAAG 1 cut(s) 657
AfaI GTAC 6 cut(s) 373, 439, 544, 882, 961, 1016
AfiI CCNNNNNNNGG 2 cut(s) 584, 700
AflII CTTAAG 1 cut(s) 953
AflIII ACRYGT 2 cut(s) 336, 469
AgsI TTSAA 5 cut(s) 121, 663, 851, 916, 940
AjnI CCWGG 4 cut(s) 47, 395, 828, 997
AjuI GAANNNNNNNTTGG 2 cut(s) 571, 603
AluBI AGCT 5 cut(s) 38, 56, 215, 776, 1030
AluI AGCT 5 cut(s) 38, 56, 215, 776, 1030
Alw21I GWGCWC 2 cut(s) 311, 818
Alw26I GTCTC 1 cut(s) 261
Alw44I GTGCAC 2 cut(s) 307, 814
AlwI GGATC 3 cut(s) 118, 362, 674
ApaLI GTGCAC 2 cut(s) 307, 814
ApeKI GCWGC 4 cut(s) 38, 500, 629, 632
ApoI RAATTY 3 cut(s) 537, 728, 1043
Asp700I GAANNNNTTC 1 cut(s) 855
Asp718I GGTACC 1 cut(s) 437
AsuC2I CCSGG 1 cut(s) 264
AsuHPI GGTGA 2 cut(s) 733, 781
AxyI CCTNAGG 1 cut(s) 350
BaeGI GKGCMC 2 cut(s) 311, 818
BanI GGYRCC 3 cut(s) 91, 437, 554
Bbv12I GWGCWC 2 cut(s) 311, 818
BbvI GCAGC 4 cut(s) 25, 512, 616, 619
BccI CCATC 5 cut(s) 380, 404, 857, 861, 930
BciT130I CCWGG 4 cut(s) 49, 397, 830, 999
BcnI CCSGG 1 cut(s) 264
BcoDI GTCTC 1 cut(s) 261
BfmI CTRYAG 1 cut(s) 498
BfrI CTTAAG 1 cut(s) 953
BisI GCNGC 5 cut(s) 39, 65, 501, 630, 633
BlsI GCNGC 5 cut(s) 40, 66, 502, 631, 634
Bme1390I CCNGG 5 cut(s) 49, 264, 397, 830, 999
BmiI GGNNCC 4 cut(s) 93, 439, 478, 556
BmrFI CCNGG 5 cut(s) 49, 264, 397, 830, 999
BmrI ACTGGG 1 cut(s) 275
BmsI GCATC 3 cut(s) 834, 898, 1131
BmuI ACTGGG 1 cut(s) 275
BplI GAGNNNNNCTC 2 cut(s) 666, 698
BpmI CTGGAG 2 cut(s) 237, 312
BpuMI CCSGG 1 cut(s) 264
BsaI GGTCTC 1 cut(s) 261
BsaJI CCNNGG 4 cut(s) 48, 194, 405, 997
BsaWI WCCGGW 1 cut(s) 1116
BsaXI ACNNNNNCTCC 4 cut(s) 210, 240, 258, 288
Bsc4I CCNNNNNNNGG 2 cut(s) 584, 700
Bse1I ACTGG 3 cut(s) 281, 295, 823
Bse21I CCTNAGG 1 cut(s) 350
Bse3DI GCAATG 1 cut(s) 480
BseBI CCWGG 4 cut(s) 49, 397, 830, 999
BseDI CCNNGG 4 cut(s) 48, 194, 405, 997
BseGI GGATG 5 cut(s) 415, 825, 872, 922, 1125
BseLI CCNNNNNNNGG 2 cut(s) 584, 700
BseMI GCAATG 1 cut(s) 480
BseMII CTCAG 2 cut(s) 768, 1062
BseNI ACTGG 3 cut(s) 281, 295, 823
BseSI GKGCMC 2 cut(s) 311, 818
BseXI GCAGC 4 cut(s) 25, 512, 616, 619
BseYI CCCAGC 1 cut(s) 56
BshNI GGYRCC 3 cut(s) 91, 437, 554
BsiHKAI GWGCWC 2 cut(s) 311, 818
BsiSI CCGG 2 cut(s) 263, 1117
BslFI GGGAC 1 cut(s) 189
BslI CCNNNNNNNGG 2 cut(s) 584, 700
BsmAI GTCTC 1 cut(s) 261
BsmFI GGGAC 1 cut(s) 189
BsmI GAATGC 1 cut(s) 1085
Bso31I GGTCTC 1 cut(s) 261
Bsp1286I GDGCHC 2 cut(s) 311, 818
Bsp1407I TGTACA 1 cut(s) 542
Bsp143I GATC 9 cut(s) 123, 343, 354, 489, 666, 679, 745, 837, 1074
BspACI CCGC 4 cut(s) 41, 65, 985, 1129
BspCNI CTCAG 2 cut(s) 769, 1063
BspHI TCATGA 2 cut(s) 208, 859
BspLI GGNNCC 4 cut(s) 93, 439, 478, 556
BspMAI CTGCAG 1 cut(s) 502
BspPI GGATC 3 cut(s) 118, 362, 674
BspT107I GGYRCC 3 cut(s) 91, 437, 554
BspTI CTTAAG 1 cut(s) 953
BspTNI GGTCTC 1 cut(s) 261
BsrDI GCAATG 1 cut(s) 480
BsrGI TGTACA 1 cut(s) 542
BsrI ACTGG 3 cut(s) 281, 295, 823
BssECI CCNNGG 4 cut(s) 48, 194, 405, 997
BssMI GATC 9 cut(s) 123, 343, 354, 489, 666, 679, 745, 837, 1074
BssNAI GTATAC 1 cut(s) 157
BssT1I CCWWGG 1 cut(s) 405
Bst1107I GTATAC 1 cut(s) 157
Bst2UI CCWGG 4 cut(s) 49, 397, 830, 999
Bst4CI ACNGT 3 cut(s) 189, 463, 562
Bst6I CTCTTC 1 cut(s) 134
BstAFI CTTAAG 1 cut(s) 953
BstAPI GCANNNNNTGC 1 cut(s) 306
BstAUI TGTACA 1 cut(s) 542
BstC8I GCNNGC 2 cut(s) 16, 1101
BstDEI CTNAG 5 cut(s) 350, 380, 527, 777, 1071
BstF5I GGATG 5 cut(s) 415, 825, 872, 922, 1125
BstKTI GATC 9 cut(s) 126, 346, 357, 492, 669, 682, 748, 840, 1077
BstMAI GTCTC 1 cut(s) 261
BstMBI GATC 9 cut(s) 123, 343, 354, 489, 666, 679, 745, 837, 1074
BstMWI GCNNNNNNNGC 6 cut(s) 44, 53, 306, 641, 822, 1128
BstNI CCWGG 4 cut(s) 49, 397, 830, 999
BstNSI RCATGY 3 cut(s) 340, 473, 1099
BstSCI CCNGG 5 cut(s) 47, 262, 395, 828, 997
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 2 cut(s) 311, 818
BstV1I GCAGC 4 cut(s) 25, 512, 616, 619
BstX2I RGATCY 1 cut(s) 123
BstYI RGATCY 1 cut(s) 123
BstZ17I GTATAC 1 cut(s) 157
Bsu36I CCTNAGG 1 cut(s) 350
BtsCI GGATG 5 cut(s) 415, 825, 872, 922, 1125
BtsI GCAGTG 2 cut(s) 9, 132
Cac8I GCNNGC 2 cut(s) 16, 1101
CciI TCATGA 2 cut(s) 208, 859
CsiI ACCWGGT 1 cut(s) 395
Csp6I GTAC 6 cut(s) 372, 438, 543, 881, 960, 1015
CviAII CATG 9 cut(s) 107, 209, 272, 337, 470, 860, 1018, 1096, 1132
CviQI GTAC 6 cut(s) 372, 438, 543, 881, 960, 1015
DdeI CTNAG 5 cut(s) 350, 380, 527, 777, 1071
DpnI GATC 9 cut(s) 125, 345, 356, 491, 668, 681, 747, 839, 1076
DpnII GATC 9 cut(s) 123, 343, 354, 489, 666, 679, 745, 837, 1074
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
Eco130I CCWWGG 1 cut(s) 405
Eco31I GGTCTC 1 cut(s) 261
Eco57I CTGAAG 1 cut(s) 657
Eco81I CCTNAGG 1 cut(s) 350
EcoRII CCWGG 4 cut(s) 47, 395, 828, 997
EcoT14I CCWWGG 1 cut(s) 405
ErhI CCWWGG 1 cut(s) 405
FaeI CATG 9 cut(s) 110, 212, 275, 340, 473, 863, 1021, 1099, 1135
FalI AAGNNNNNCTT 2 cut(s) 113, 145
FaqI GGGAC 1 cut(s) 189
FatI CATG 9 cut(s) 106, 208, 271, 336, 469, 859, 1017, 1095, 1131
FauI CCCGC 1 cut(s) 992
FblI GTMKAC 1 cut(s) 156
Fnu4HI GCNGC 5 cut(s) 39, 65, 501, 630, 633
FokI GGATG 5 cut(s) 422, 812, 879, 909, 1112
Fsp4HI GCNGC 5 cut(s) 39, 65, 501, 630, 633
GluI GCNGC 5 cut(s) 39, 65, 501, 630, 633
GsaI CCCAGC 1 cut(s) 60
GsuI CTGGAG 2 cut(s) 237, 312
HapII CCGG 2 cut(s) 263, 1117
Hin1II CATG 9 cut(s) 110, 212, 275, 340, 473, 863, 1021, 1099, 1135
HinfI GANTC 3 cut(s) 736, 949, 1113
HpaII CCGG 2 cut(s) 263, 1117
HphI GGTGA 2 cut(s) 733, 781
Hpy166II GTNNAC 4 cut(s) 157, 288, 309, 816
Hpy188I TCNGA 6 cut(s) 116, 198, 325, 608, 927, 1072
Hpy188III TCNNGA 4 cut(s) 209, 509, 764, 860
Hpy8I GTNNAC 4 cut(s) 157, 288, 309, 816
HpyAV CCTTC 2 cut(s) 632, 1103
HpyCH4III ACNGT 3 cut(s) 189, 463, 562
HpyCH4V TGCA 8 cut(s) 33, 300, 309, 500, 572, 644, 816, 1122
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 53, 306, 641, 822, 1128
HpyF3I CTNAG 5 cut(s) 350, 380, 527, 777, 1071
Hsp92II CATG 9 cut(s) 110, 212, 275, 340, 473, 863, 1021, 1099, 1135
KpnI GGTACC 1 cut(s) 441
Kzo9I GATC 9 cut(s) 123, 343, 354, 489, 666, 679, 745, 837, 1074
LmnI GCTCC 2 cut(s) 1027, 1135
Lsp1109I GCAGC 4 cut(s) 25, 512, 616, 619
LweI GCATC 3 cut(s) 834, 898, 1131
MabI ACCWGGT 1 cut(s) 395
MaeIII GTNAC 2 cut(s) 247, 971
MalI GATC 9 cut(s) 125, 345, 356, 491, 668, 681, 747, 839, 1076
MboI GATC 9 cut(s) 123, 343, 354, 489, 666, 679, 745, 837, 1074
MboII GAAGA 3 cut(s) 121, 133, 499
MflI RGATCY 1 cut(s) 123
MhlI GDGCHC 2 cut(s) 311, 818
MluCI AATT 7 cut(s) 72, 222, 420, 537, 728, 1034, 1043
MlyI GAGTC 1 cut(s) 943
MmeI TCCRAC 3 cut(s) 283, 714, 868
MroXI GAANNNNTTC 1 cut(s) 855
MseI TTAA 1 cut(s) 954
MslI CAYNNNNRTG 2 cut(s) 150, 1130
MspA1I CMGCKG 1 cut(s) 67
MspCI CTTAAG 1 cut(s) 953
MspI CCGG 2 cut(s) 263, 1117
MspR9I CCNGG 5 cut(s) 49, 264, 397, 830, 999
Mva1269I GAATGC 1 cut(s) 1085
MvaI CCWGG 4 cut(s) 49, 397, 830, 999
MwoI GCNNNNNNNGC 6 cut(s) 44, 53, 306, 641, 822, 1128
NciI CCSGG 1 cut(s) 264
NdeII GATC 9 cut(s) 123, 343, 354, 489, 666, 679, 745, 837, 1074
NlaIII CATG 9 cut(s) 110, 212, 275, 340, 473, 863, 1021, 1099, 1135
NlaIV GGNNCC 4 cut(s) 93, 439, 478, 556
NspI RCATGY 3 cut(s) 340, 473, 1099
PagI TCATGA 2 cut(s) 208, 859
PciI ACATGT 2 cut(s) 336, 469
PctI GAATGC 1 cut(s) 1085
PdmI GAANNNNTTC 1 cut(s) 855
PfeI GAWTC 2 cut(s) 736, 1113
PflFI GACNNNGTC 1 cut(s) 272
PkrI GCNGC 5 cut(s) 40, 66, 502, 631, 634
PleI GAGTC 1 cut(s) 943
PpsI GAGTC 1 cut(s) 943
PscI ACATGT 2 cut(s) 336, 469
Psp6I CCWGG 4 cut(s) 47, 395, 828, 997
PspFI CCCAGC 1 cut(s) 56
PspGI CCWGG 4 cut(s) 47, 395, 828, 997
PspN4I GGNNCC 4 cut(s) 93, 439, 478, 556
PstI CTGCAG 1 cut(s) 502
PsuI RGATCY 1 cut(s) 123
PsyI GACNNNGTC 1 cut(s) 272
RsaI GTAC 6 cut(s) 373, 439, 544, 882, 961, 1016
RsaNI GTAC 6 cut(s) 372, 438, 543, 881, 960, 1015
RseI CAYNNNNRTG 2 cut(s) 150, 1130
SaqAI TTAA 1 cut(s) 954
SatI GCNGC 5 cut(s) 39, 65, 501, 630, 633
Sau3AI GATC 9 cut(s) 123, 343, 354, 489, 666, 679, 745, 837, 1074
SchI GAGTC 1 cut(s) 943
ScrFI CCNGG 5 cut(s) 49, 264, 397, 830, 999
SduI GDGCHC 2 cut(s) 311, 818
SexAI ACCWGGT 1 cut(s) 395
SfaNI GCATC 3 cut(s) 834, 898, 1131
SfcI CTRYAG 1 cut(s) 498
SmiMI CAYNNNNRTG 2 cut(s) 150, 1130
SmlI CTYRAG 1 cut(s) 953
SmoI CTYRAG 1 cut(s) 953
Sse9I AATT 7 cut(s) 72, 222, 420, 537, 728, 1034, 1043
SsiI CCGC 4 cut(s) 41, 65, 985, 1129
StyD4I CCNGG 5 cut(s) 47, 262, 395, 828, 997
StyI CCWWGG 1 cut(s) 405
TaaI ACNGT 3 cut(s) 189, 463, 562
TaqI TCGA 2 cut(s) 810, 1089
TasI AATT 7 cut(s) 72, 222, 420, 537, 728, 1034, 1043
TatI WGTACW 3 cut(s) 542, 880, 1014
TauI GCSGC 1 cut(s) 67
TfiI GAWTC 2 cut(s) 736, 1113
Tru1I TTAA 1 cut(s) 954
Tru9I TTAA 1 cut(s) 954
TseI GCWGC 4 cut(s) 38, 500, 629, 632
TspDTI ATGAA 8 cut(s) 123, 225, 579, 741, 848, 944, 1034, 1036
Tth111I GACNNNGTC 1 cut(s) 272
Vha464I CTTAAG 1 cut(s) 953
VneI GTGCAC 2 cut(s) 307, 814
XapI RAATTY 3 cut(s) 537, 728, 1043
XceI RCATGY 3 cut(s) 340, 473, 1099
XcmI CCANNNNNNNNNTGG 1 cut(s) 607
XmiI GTMKAC 1 cut(s) 156
XmnI GAANNNNTTC 1 cut(s) 855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.