MD10G1014200.v1.1

alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
1919365 .. 1921890
2526 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1014200.v1.1.491

Sequence Viewer

Length: 1143 bp
ATGTCTAATACTGCTGGTCAGGTCATACGCTGCAGAGCTGCTGTAGCTTGGGAAGCAGGGAAGCCACTAGTGATTGAAGAAATTGAGGTGGCACCACCACAAGCAAATGAAGTTCGCATAAAGATCCTTTTTACCTCTTTGTGCCACACTGATGTCCACTTCTGGGAAGCCAAGGGACAAAACCCTTTATTTCCTAGAATTTATGGTCATGAGGCAGGAGGGATTGTGGAGAGTGTTGGTGAGGGCGTGACGGATCTGAAAGCCGGCGATCATGTCCTGCCGGTGTTCACAGGGGAATGCAAGGACTGCGCTCACTGCAAATCAGAAGAGAGCAACATGTGTGACCTCCTCAGGATAAACACTGACAGGGGAGTGATGCTCAGTGATGGAAAATCAAGATTTTCAATCAAAGGCAAGCCTATCTACCATTTTGTTGGGACTTCCACCTTCAGCGAGTACACTGTTGTTCACGTTGGCTGCCTTGCCAAGATCAATCCCTCGGCGCCTCTAGACAAAGTCTGTCTCCTCAGTTGTGGAATCTCCACAGGTCTCGGAGCTACTCTAAATGTTGCAAAACCAAAAAAGGGATCAACCGTGGCTGTTTTCGGATTGGGAGCTGTAGGCCTTGCAGCTGCTGAAGGAGCCAGGTTGTCTGGCGCTTCAAGAATTATCGGTGTTGATTTGCATTCGGGCAGATTTGAAGAAGCAAAAAAGTTTGGCGTGACAGAATTCGTGAACCCAAAAGAGCACGAAAAACCAGTTCAAGAGGTGATTGCTGAGTTGACGAATGGAGGAGTGGACAGAAGCATTGAATGTACAGGAAGCACTGAAGCCATGATATCTGCATTTGAATGTGTCCATGATGGTTGGGGTGTTGCTGTTCTTGTGGGAGTACCACACAAAGATGCCGTCTTCAAGACGCATCCGGTTAACTTTCTGAATGAGAGGACTCTCAAGGGTACATTCTTCGGAAACTACAAGACTCGAACGGACATTCCCTCTGTCGTGGAGAAGTACATGAACAAGGAACTGGAGCTAGAGAAATTCATCACCCACAAAGTCCCGTTCTCAGAAATCAACAAGGCATTTGAGTACATGCTTAAAGGGGAAGGTCTTCGTTGCATAATCCGCATGGAGGAATGA

Protein Analysis

381

Amino Acids

41.3

Weight (kDa)

6.37

Isoelectric Point (pI)

32.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 35 - 164 1.1e-20 Alcohol dehydrogenase GroES-like domain
Glu_dehyd_C PF16912 197 - 364 9.9e-07 Glucose dehydrogenase C-terminus
ADH_zinc_N PF00107 206 - 336 3e-28 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 91, 502
AciI CCGC 1 cut(s) 1129
AclWI GGATC 3 cut(s) 118, 261, 595
AcsI RAATTY 3 cut(s) 198, 728, 1043
AcuI CTGAAG 3 cut(s) 433, 657, 849
AcyI GRCGYC 1 cut(s) 503
AfaI GTAC 6 cut(s) 458, 817, 894, 961, 1016, 1094
AfiI CCNNNNNNNGG 3 cut(s) 163, 584, 1135
AflIII ACRYGT 1 cut(s) 336
AgsI TTSAA 8 cut(s) 77, 405, 663, 701, 764, 812, 851, 916
AhlI ACTAGT 1 cut(s) 67
AjnI CCWGG 1 cut(s) 644
AloI GAACNNNNNNTCC 2 cut(s) 979, 1011
AluBI AGCT 6 cut(s) 38, 47, 557, 617, 632, 1036
AluI AGCT 6 cut(s) 38, 47, 557, 617, 632, 1036
Alw21I GWGCWC 1 cut(s) 750
Alw26I GTCTC 2 cut(s) 527, 554
AlwI GGATC 3 cut(s) 118, 261, 595
AlwNI CAGNNNCTG 1 cut(s) 635
AoxI GGCC 1 cut(s) 622
ApeKI GCWGC 5 cut(s) 30, 38, 477, 629, 632
ApoI RAATTY 3 cut(s) 198, 728, 1043
ArsI GACNNNNNNTTYG 2 cut(s) 894, 926
Asp700I GAANNNNTTC 1 cut(s) 1113
AspLEI GCGC 3 cut(s) 311, 505, 659
AsuHPI GGTGA 3 cut(s) 251, 781, 1042
AxyI CCTNAGG 1 cut(s) 350
BanI GGYRCC 2 cut(s) 91, 502
BbsI GAAGAC 2 cut(s) 904, 1106
Bbv12I GWGCWC 1 cut(s) 750
BbvI GCAGC 5 cut(s) 17, 25, 464, 619, 641
BccI CCATC 2 cut(s) 380, 857
BceAI ACGGC 1 cut(s) 893
BciT130I CCWGG 1 cut(s) 646
BcoDI GTCTC 2 cut(s) 527, 554
BcuI ACTAGT 1 cut(s) 67
BfaI CTAG 4 cut(s) 68, 195, 509, 1037
BfmI CTRYAG 3 cut(s) 31, 42, 618
BfoI RGCGCY 2 cut(s) 506, 660
BisI GCNGC 5 cut(s) 31, 39, 478, 630, 633
BlsI GCNGC 5 cut(s) 32, 40, 479, 631, 634
Bme1390I CCNGG 1 cut(s) 646
BmiI GGNNCC 3 cut(s) 93, 504, 643
BmrFI CCNGG 1 cut(s) 646
BmsI GCATC 3 cut(s) 366, 895, 931
BpiI GAAGAC 2 cut(s) 904, 1106
BplI GAGNNNNNCTC 2 cut(s) 363, 395
BpmI CTGGAG 1 cut(s) 1052
BpuEI CTTGAG 1 cut(s) 938
BsaHI GRCGYC 1 cut(s) 503
BsaI GGTCTC 1 cut(s) 554
BsaJI CCNNGG 3 cut(s) 171, 498, 594
BsaWI WCCGGW 1 cut(s) 925
BsaXI ACNNNNNCTCC 2 cut(s) 210, 240
Bsc4I CCNNNNNNNGG 3 cut(s) 163, 584, 1135
Bse118I RCCGGY 2 cut(s) 263, 280
Bse1I ACTGG 2 cut(s) 758, 1035
Bse21I CCTNAGG 1 cut(s) 350
BseBI CCWGG 1 cut(s) 646
BseDI CCNNGG 3 cut(s) 171, 498, 594
BseGI GGATG 1 cut(s) 922
BseLI CCNNNNNNNGG 3 cut(s) 163, 584, 1135
BseMII CTCAG 5 cut(s) 364, 394, 541, 768, 1083
BseNI ACTGG 2 cut(s) 758, 1035
BseRI GAGGAG 3 cut(s) 338, 515, 807
BseXI GCAGC 5 cut(s) 17, 25, 464, 619, 641
BshFI GGCC 1 cut(s) 624
BshNI GGYRCC 2 cut(s) 91, 502
BsiHKAI GWGCWC 1 cut(s) 750
BsiSI CCGG 3 cut(s) 264, 281, 926
BslFI GGGAC 3 cut(s) 189, 451, 1046
BslI CCNNNNNNNGG 3 cut(s) 163, 584, 1135
BsmAI GTCTC 2 cut(s) 527, 554
BsmFI GGGAC 3 cut(s) 189, 451, 1046
BsmI GAATGC 2 cut(s) 302, 685
BsnI GGCC 1 cut(s) 624
Bso31I GGTCTC 1 cut(s) 554
Bsp1286I GDGCHC 1 cut(s) 750
Bsp1407I TGTACA 1 cut(s) 815
Bsp143I GATC 5 cut(s) 123, 253, 268, 489, 587
BspACI CCGC 1 cut(s) 1129
BspANI GGCC 1 cut(s) 624
BspCNI CTCAG 5 cut(s) 363, 393, 540, 769, 1082
BspHI TCATGA 1 cut(s) 208
BspLI GGNNCC 3 cut(s) 93, 504, 643
BspMAI CTGCAG 1 cut(s) 35
BspPI GGATC 3 cut(s) 118, 261, 595
BspT107I GGYRCC 2 cut(s) 91, 502
BspTNI GGTCTC 1 cut(s) 554
BsrFI RCCGGY 2 cut(s) 263, 280
BsrGI TGTACA 1 cut(s) 815
BsrI ACTGG 2 cut(s) 758, 1035
BssAI RCCGGY 2 cut(s) 263, 280
BssECI CCNNGG 3 cut(s) 171, 498, 594
BssMI GATC 5 cut(s) 123, 253, 268, 489, 587
BssNI GRCGYC 1 cut(s) 503
BssT1I CCWWGG 1 cut(s) 171
Bst2UI CCWGG 1 cut(s) 646
Bst4CI ACNGT 2 cut(s) 463, 595
Bst6I CTCTTC 1 cut(s) 321
BstACI GRCGYC 1 cut(s) 503
BstAPI GCANNNNNTGC 1 cut(s) 306
BstAUI TGTACA 1 cut(s) 815
BstC8I GCNNGC 2 cut(s) 265, 416
BstDEI CTNAG 5 cut(s) 350, 380, 527, 777, 1069
BstDSI CCRYGG 1 cut(s) 594
BstF5I GGATG 1 cut(s) 922
BstH2I RGCGCY 2 cut(s) 506, 660
BstHHI GCGC 3 cut(s) 311, 505, 659
BstKTI GATC 5 cut(s) 126, 256, 271, 492, 590
BstMAI GTCTC 2 cut(s) 527, 554
BstMBI GATC 5 cut(s) 123, 253, 268, 489, 587
BstMWI GCNNNNNNNGC 6 cut(s) 44, 53, 306, 315, 641, 1128
BstNI CCWGG 1 cut(s) 646
BstNSI RCATGY 2 cut(s) 340, 1099
BstSCI CCNGG 1 cut(s) 644
BstSFI CTRYAG 3 cut(s) 31, 42, 618
BstV1I GCAGC 5 cut(s) 17, 25, 464, 619, 641
BstV2I GAAGAC 2 cut(s) 904, 1106
BstX2I RGATCY 2 cut(s) 123, 253
BstXI CCANNNNNNTGG 1 cut(s) 434
BstYI RGATCY 2 cut(s) 123, 253
Bsu36I CCTNAGG 1 cut(s) 350
BsuRI GGCC 1 cut(s) 624
BtgI CCRYGG 1 cut(s) 594
BtsCI GGATG 1 cut(s) 922
BtsI GCAGTG 1 cut(s) 313
BtsIMutI CAGTG 6 cut(s) 147, 313, 360, 388, 459, 825
Cac8I GCNNGC 2 cut(s) 265, 416
CaiI CAGNNNCTG 1 cut(s) 635
CciI TCATGA 1 cut(s) 208
CfoI GCGC 3 cut(s) 311, 505, 659
Cfr10I RCCGGY 2 cut(s) 263, 280
CseI GACGC 1 cut(s) 928
Csp6I GTAC 6 cut(s) 457, 816, 893, 960, 1015, 1093
CviAII CATG 8 cut(s) 209, 272, 337, 835, 860, 1018, 1096, 1132
CviQI GTAC 6 cut(s) 457, 816, 893, 960, 1015, 1093
DdeI CTNAG 5 cut(s) 350, 380, 527, 777, 1069
DinI GGCGCC 1 cut(s) 504
DpnI GATC 5 cut(s) 125, 255, 270, 491, 589
DpnII GATC 5 cut(s) 123, 253, 268, 489, 587
Eam1104I CTCTTC 1 cut(s) 321
EarI CTCTTC 1 cut(s) 321
Eco130I CCWWGG 1 cut(s) 171
Eco147I AGGCCT 1 cut(s) 624
Eco31I GGTCTC 1 cut(s) 554
Eco32I GATATC 1 cut(s) 840
Eco57I CTGAAG 3 cut(s) 433, 657, 849
Eco81I CCTNAGG 1 cut(s) 350
EcoRI GAATTC 1 cut(s) 728
EcoRII CCWGG 1 cut(s) 644
EcoRV GATATC 1 cut(s) 840
EcoT14I CCWWGG 1 cut(s) 171
EgeI GGCGCC 1 cut(s) 504
EheI GGCGCC 1 cut(s) 504
ErhI CCWWGG 1 cut(s) 171
FaeI CATG 8 cut(s) 212, 275, 340, 838, 863, 1021, 1099, 1135
FaqI GGGAC 3 cut(s) 189, 451, 1046
FatI CATG 8 cut(s) 208, 271, 336, 834, 859, 1017, 1095, 1131
Fnu4HI GCNGC 5 cut(s) 31, 39, 478, 630, 633
FokI GGATG 1 cut(s) 909
Fsp4HI GCNGC 5 cut(s) 31, 39, 478, 630, 633
FspBI CTAG 4 cut(s) 68, 195, 509, 1037
GlaI GCGC 3 cut(s) 310, 504, 658
GluI GCNGC 5 cut(s) 31, 39, 478, 630, 633
GsuI CTGGAG 1 cut(s) 1052
HaeII RGCGCY 2 cut(s) 506, 660
HaeIII GGCC 1 cut(s) 624
HapII CCGG 3 cut(s) 264, 281, 926
HgaI GACGC 1 cut(s) 928
HhaI GCGC 3 cut(s) 311, 505, 659
Hin1I GRCGYC 1 cut(s) 503
Hin1II CATG 8 cut(s) 212, 275, 340, 838, 863, 1021, 1099, 1135
Hin6I GCGC 3 cut(s) 309, 503, 657
HinP1I GCGC 3 cut(s) 309, 503, 657
HincII GTYRAC 2 cut(s) 783, 931
HindII GTYRAC 2 cut(s) 783, 931
HinfI GANTC 3 cut(s) 537, 949, 982
HpaI GTTAAC 1 cut(s) 931
HpaII CCGG 3 cut(s) 264, 281, 926
HphI GGTGA 3 cut(s) 251, 781, 1042
Hpy166II GTNNAC 8 cut(s) 157, 288, 459, 469, 736, 783, 799, 931
Hpy188I TCNGA 7 cut(s) 258, 325, 554, 608, 939, 971, 1072
Hpy188III TCNNGA 8 cut(s) 209, 352, 396, 509, 663, 733, 764, 916
Hpy8I GTNNAC 8 cut(s) 157, 288, 459, 469, 736, 783, 799, 931
HpyAV CCTTC 3 cut(s) 457, 632, 1103
HpyCH4III ACNGT 2 cut(s) 463, 595
HpyCH4IV ACGT 1 cut(s) 471
HpyCH4V TGCA 8 cut(s) 33, 300, 318, 572, 629, 685, 845, 1122
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 53, 306, 315, 641, 1128
HpyF3I CTNAG 5 cut(s) 350, 380, 527, 777, 1069
HpySE526I ACGT 1 cut(s) 471
Hsp92I GRCGYC 1 cut(s) 503
Hsp92II CATG 8 cut(s) 212, 275, 340, 838, 863, 1021, 1099, 1135
HspAI GCGC 3 cut(s) 309, 503, 657
KasI GGCGCC 1 cut(s) 502
KroI GCCGGC 1 cut(s) 263
KroNI GCCGGC 1 cut(s) 265
KspAI GTTAAC 1 cut(s) 931
Kzo9I GATC 5 cut(s) 123, 253, 268, 489, 587
LmnI GCTCC 4 cut(s) 554, 614, 641, 1033
Lsp1109I GCAGC 5 cut(s) 17, 25, 464, 619, 641
LweI GCATC 3 cut(s) 366, 895, 931
MaeI CTAG 4 cut(s) 68, 195, 509, 1037
MaeII ACGT 1 cut(s) 471
MaeIII GTNAC 3 cut(s) 247, 341, 721
MalI GATC 5 cut(s) 125, 255, 270, 491, 589
MboI GATC 5 cut(s) 123, 253, 268, 489, 587
MboII GAAGA 6 cut(s) 89, 338, 713, 904, 958, 1106
MflI RGATCY 2 cut(s) 123, 253
MhlI GDGCHC 1 cut(s) 750
MluCI AATT 5 cut(s) 81, 198, 666, 728, 1043
Mly113I GGCGCC 1 cut(s) 503
MlyI GAGTC 2 cut(s) 943, 976
MroNI GCCGGC 1 cut(s) 263
MroXI GAANNNNTTC 1 cut(s) 1113
MseI TTAA 2 cut(s) 930, 1101
MslI CAYNNNNRTG 3 cut(s) 150, 850, 903
MspA1I CMGCKG 1 cut(s) 632
MspI CCGG 3 cut(s) 264, 281, 926
MspR9I CCNGG 1 cut(s) 646
Mva1269I GAATGC 2 cut(s) 302, 685
MvaI CCWGG 1 cut(s) 646
MwoI GCNNNNNNNGC 6 cut(s) 44, 53, 306, 315, 641, 1128
NaeI GCCGGC 1 cut(s) 265
NarI GGCGCC 1 cut(s) 503
NdeII GATC 5 cut(s) 123, 253, 268, 489, 587
NgoMIV GCCGGC 1 cut(s) 263
NlaIII CATG 8 cut(s) 212, 275, 340, 838, 863, 1021, 1099, 1135
NlaIV GGNNCC 3 cut(s) 93, 504, 643
NmeAIII GCCGAG 1 cut(s) 479
NmuCI GTSAC 3 cut(s) 247, 341, 721
NspI RCATGY 2 cut(s) 340, 1099
PagI TCATGA 1 cut(s) 208
PceI AGGCCT 1 cut(s) 624
PciI ACATGT 1 cut(s) 336
PctI GAATGC 2 cut(s) 302, 685
PdiI GCCGGC 1 cut(s) 265
PdmI GAANNNNTTC 1 cut(s) 1113
PfeI GAWTC 1 cut(s) 537
PflFI GACNNNGTC 1 cut(s) 515
PkrI GCNGC 5 cut(s) 32, 40, 479, 631, 634
PleI GAGTC 2 cut(s) 943, 976
PluTI GGCGCC 1 cut(s) 506
PpsI GAGTC 2 cut(s) 943, 976
PscI ACATGT 1 cut(s) 336
Psp6I CCWGG 1 cut(s) 644
PspGI CCWGG 1 cut(s) 644
PspN4I GGNNCC 3 cut(s) 93, 504, 643
PstI CTGCAG 1 cut(s) 35
PstNI CAGNNNCTG 1 cut(s) 635
PsuI RGATCY 2 cut(s) 123, 253
PsyI GACNNNGTC 1 cut(s) 515
PvuII CAGCTG 1 cut(s) 632
RsaI GTAC 6 cut(s) 458, 817, 894, 961, 1016, 1094
RsaNI GTAC 6 cut(s) 457, 816, 893, 960, 1015, 1093
RseI CAYNNNNRTG 3 cut(s) 150, 850, 903
SaqAI TTAA 2 cut(s) 930, 1101
SatI GCNGC 5 cut(s) 31, 39, 478, 630, 633
Sau3AI GATC 5 cut(s) 123, 253, 268, 489, 587
SchI GAGTC 2 cut(s) 943, 976
ScrFI CCNGG 1 cut(s) 646
SduI GDGCHC 1 cut(s) 750
SfaNI GCATC 3 cut(s) 366, 895, 931
SfcI CTRYAG 3 cut(s) 31, 42, 618
SfoI GGCGCC 1 cut(s) 504
SmiMI CAYNNNNRTG 3 cut(s) 150, 850, 903
SmlI CTYRAG 1 cut(s) 953
SmoI CTYRAG 1 cut(s) 953
SpeI ACTAGT 1 cut(s) 67
Sse9I AATT 5 cut(s) 81, 198, 666, 728, 1043
SseBI AGGCCT 1 cut(s) 624
SsiI CCGC 1 cut(s) 1129
SspDI GGCGCC 1 cut(s) 502
SspMI CTAG 4 cut(s) 68, 195, 509, 1037
StuI AGGCCT 1 cut(s) 624
StyD4I CCNGG 1 cut(s) 644
StyI CCWWGG 1 cut(s) 171
TaaI ACNGT 2 cut(s) 463, 595
TaiI ACGT 1 cut(s) 474
TaqI TCGA 1 cut(s) 985
TasI AATT 5 cut(s) 81, 198, 666, 728, 1043
TatI WGTACW 4 cut(s) 456, 815, 1014, 1092
TfiI GAWTC 1 cut(s) 537
Tru1I TTAA 2 cut(s) 930, 1101
Tru9I TTAA 2 cut(s) 930, 1101
TscAI CASTG 6 cut(s) 154, 320, 367, 388, 466, 832
TseFI GTSAC 3 cut(s) 247, 341, 721
TseI GCWGC 5 cut(s) 30, 38, 477, 629, 632
Tsp45I GTSAC 3 cut(s) 247, 341, 721
TspDTI ATGAA 3 cut(s) 123, 1034, 1036
TspGWI ACGGA 2 cut(s) 266, 1004
TspRI CASTG 6 cut(s) 154, 320, 367, 388, 466, 832
Tth111I GACNNNGTC 1 cut(s) 515
XapI RAATTY 3 cut(s) 198, 728, 1043
XbaI TCTAGA 1 cut(s) 508
XceI RCATGY 2 cut(s) 340, 1099
XmnI GAANNNNTTC 1 cut(s) 1113
XspI CTAG 4 cut(s) 68, 195, 509, 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.