MD10G1013800.v1.1

alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
1853619 .. 1856065
2447 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1013800.v1.1.491

Sequence Viewer

Length: 1119 bp
ATGTATGATACTGCTGGTCAGGTCATACGCTGCAGAGCTGCTGTAGCTTGGGAAGCAGGGAAGCCACTGGTGGTTGAAGAAGTTGAGGTGGCACCACCACAAGCAAATGAAGTTCGCTTGAAGATCCTTTTTACCTCTTTGTGCCACACTGATGTCTACTTCTGGGAAGCCAAGGGACAAAACCCTTTATTTCCTAGAATTTATGGTCATGAGGCAGGAGGGATCGTGGAGAGTGTTGGTGAGGGCGTGACGGATCTGAAAGCTGGCGACCATGTCCTGCCGGTATTCATGGGGGAATGCAAGGACTGCGCTCACTGCAAATCAGAAGAGAGCAACATGTGTGACCTCCTCAGGATAAACACTGACAGGGGAGTGATGCTCGGGGATGGCAAATCAAGATTTTCAATTGTTGGGACATCCACCTTCAGTGAGTACACTGTTGTTCATGTTGGCTGCGTTGCCAAGATCAATCCCTCGGCGCCTCTAGACAAAGTCTGTCTCCTCAGTTGTGGAATCTCCACAGGTCTCGGAGCTACTTTAAATGTTGCAAAACCGAAAAGGGGATCAACTGTGGCTGTTTTCGGATTGGGAGCTGTAGGCCTTGCAGCTGCCGAAGGAGCCAGGTTGTCTGGTGCTTCAAGAATTATCGGTGTTGATTTGAATTCAAGCAAATTTGAAGAAGCGAAAAAGTTTGGTGTGACGGAATTCGTGAACCCAAAAGAGCACAAAAAACCAGTTCAAGAGGTGATTGCTGAGCTGACGAATGGAGGAGTGGACAGAAGCATTGAATGTACAGGAAGTGTTGAAGCCATGATATCTGCATTTGAATGTGTCCATGATGGTTGGGGTGTTGCCGTTCTTGTGGGAGTACCACACAAAGAAGCCGTCTTCAAGACGCATCCGGTTAACTTTCTGACCGAGAGGACTCTCAAGGGTACATTCTACGGAAACTACAAGCCTCGAACGGACATTCCCTCTGTTGTGGAGAAGTACATGAACAAGGAACTGGAGCTAGAAAAATTCATCACCCACGAAGTCCCGTTCTCAGAAATCAACAAGGCCTTTGAGTACATGGTTAAAGGGGAAGGTCTTCGTTGCCTAATCCACATGGAGGAATGA

Protein Analysis

373

Amino Acids

40.37

Weight (kDa)

5.84

Isoelectric Point (pI)

32.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 35 - 156 2.1e-20 Alcohol dehydrogenase GroES-like domain
Glu_dehyd_C PF16912 189 - 356 2.3e-06 Glucose dehydrogenase C-terminus
ADH_zinc_N PF00107 198 - 329 1.4e-28 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 91, 478
AccI GTMKAC 1 cut(s) 156
AclWI GGATC 4 cut(s) 118, 230, 261, 571
AcsI RAATTY 5 cut(s) 198, 661, 671, 704, 1019
AcuI CTGAAG 1 cut(s) 409
AcyI GRCGYC 1 cut(s) 479
AfaI GTAC 6 cut(s) 434, 793, 870, 937, 992, 1070
AfiI CCNNNNNNNGG 2 cut(s) 560, 1111
AflIII ACRYGT 1 cut(s) 336
AjnI CCWGG 1 cut(s) 620
AloI GAACNNNNNNTCC 2 cut(s) 955, 987
AluBI AGCT 8 cut(s) 38, 47, 263, 533, 593, 608, 757, 1012
AluI AGCT 8 cut(s) 38, 47, 263, 533, 593, 608, 757, 1012
Alw21I GWGCWC 1 cut(s) 726
Alw26I GTCTC 2 cut(s) 503, 530
AlwI GGATC 4 cut(s) 118, 230, 261, 571
Ama87I CYCGRG 1 cut(s) 380
AoxI GGCC 2 cut(s) 598, 1059
ApeKI GCWGC 5 cut(s) 30, 38, 453, 605, 608
ApoI RAATTY 5 cut(s) 198, 661, 671, 704, 1019
ArsI GACNNNNNNTTYG 2 cut(s) 870, 902
Asp700I GAANNNNTTC 1 cut(s) 1089
AspLEI GCGC 2 cut(s) 311, 481
AsuHPI GGTGA 3 cut(s) 251, 757, 1018
AvaI CYCGRG 1 cut(s) 380
AxyI CCTNAGG 1 cut(s) 350
BanI GGYRCC 2 cut(s) 91, 478
BbsI GAAGAC 2 cut(s) 880, 1082
Bbv12I GWGCWC 1 cut(s) 726
BbvI GCAGC 5 cut(s) 17, 25, 440, 595, 617
BccI CCATC 2 cut(s) 380, 833
BceAI ACGGC 2 cut(s) 839, 869
BciT130I CCWGG 1 cut(s) 622
BcoDI GTCTC 2 cut(s) 503, 530
BfaI CTAG 3 cut(s) 195, 485, 1013
BfmI CTRYAG 3 cut(s) 31, 42, 594
BfoI RGCGCY 1 cut(s) 482
BisI GCNGC 5 cut(s) 31, 39, 454, 606, 609
BlpI GCTNAGC 1 cut(s) 753
BlsI GCNGC 5 cut(s) 32, 40, 455, 607, 610
Bme1390I CCNGG 1 cut(s) 622
BmeT110I CYCGRG 1 cut(s) 380
BmiI GGNNCC 3 cut(s) 93, 480, 619
BmrFI CCNGG 1 cut(s) 622
BmsI GCATC 2 cut(s) 366, 907
BpiI GAAGAC 2 cut(s) 880, 1082
BplI GAGNNNNNCTC 2 cut(s) 363, 395
BpmI CTGGAG 1 cut(s) 1028
Bpu1102I GCTNAGC 1 cut(s) 753
BpuEI CTTGAG 1 cut(s) 914
BsaHI GRCGYC 1 cut(s) 479
BsaI GGTCTC 1 cut(s) 530
BsaJI CCNNGG 2 cut(s) 171, 474
BsaWI WCCGGW 1 cut(s) 901
BsaXI ACNNNNNCTCC 2 cut(s) 210, 240
Bsc4I CCNNNNNNNGG 2 cut(s) 560, 1111
Bse118I RCCGGY 1 cut(s) 280
Bse1I ACTGG 3 cut(s) 72, 734, 1011
Bse21I CCTNAGG 1 cut(s) 350
BseBI CCWGG 1 cut(s) 622
BseDI CCNNGG 2 cut(s) 171, 474
BseGI GGATG 3 cut(s) 391, 416, 898
BseLI CCNNNNNNNGG 2 cut(s) 560, 1111
BseMII CTCAG 4 cut(s) 364, 517, 744, 1059
BseNI ACTGG 3 cut(s) 72, 734, 1011
BseRI GAGGAG 3 cut(s) 338, 491, 783
BseXI GCAGC 5 cut(s) 17, 25, 440, 595, 617
BshFI GGCC 2 cut(s) 600, 1061
BshNI GGYRCC 2 cut(s) 91, 478
BsiHKAI GWGCWC 1 cut(s) 726
BsiHKCI CYCGRG 1 cut(s) 380
BsiSI CCGG 2 cut(s) 281, 902
BslFI GGGAC 3 cut(s) 189, 427, 1022
BslI CCNNNNNNNGG 2 cut(s) 560, 1111
BsmAI GTCTC 2 cut(s) 503, 530
BsmFI GGGAC 3 cut(s) 189, 427, 1022
BsmI GAATGC 1 cut(s) 302
BsnI GGCC 2 cut(s) 600, 1061
Bso31I GGTCTC 1 cut(s) 530
BsoBI CYCGRG 1 cut(s) 380
Bsp1286I GDGCHC 1 cut(s) 726
Bsp1407I TGTACA 1 cut(s) 791
Bsp143I GATC 5 cut(s) 123, 222, 253, 465, 563
Bsp1720I GCTNAGC 1 cut(s) 753
BspANI GGCC 2 cut(s) 600, 1061
BspCNI CTCAG 4 cut(s) 363, 516, 745, 1058
BspHI TCATGA 1 cut(s) 208
BspLI GGNNCC 3 cut(s) 93, 480, 619
BspMAI CTGCAG 1 cut(s) 35
BspPI GGATC 4 cut(s) 118, 230, 261, 571
BspT107I GGYRCC 2 cut(s) 91, 478
BspTNI GGTCTC 1 cut(s) 530
BsrFI RCCGGY 1 cut(s) 280
BsrGI TGTACA 1 cut(s) 791
BsrI ACTGG 3 cut(s) 72, 734, 1011
BssAI RCCGGY 1 cut(s) 280
BssECI CCNNGG 2 cut(s) 171, 474
BssMI GATC 5 cut(s) 123, 222, 253, 465, 563
BssNI GRCGYC 1 cut(s) 479
BssT1I CCWWGG 1 cut(s) 171
Bst2UI CCWGG 1 cut(s) 622
Bst4CI ACNGT 2 cut(s) 439, 571
Bst6I CTCTTC 1 cut(s) 321
BstACI GRCGYC 1 cut(s) 479
BstAPI GCANNNNNTGC 1 cut(s) 306
BstAUI TGTACA 1 cut(s) 791
BstC8I GCNNGC 1 cut(s) 265
BstDEI CTNAG 4 cut(s) 350, 503, 753, 1045
BstF5I GGATG 3 cut(s) 391, 416, 898
BstH2I RGCGCY 1 cut(s) 482
BstHHI GCGC 2 cut(s) 311, 481
BstKTI GATC 5 cut(s) 126, 225, 256, 468, 566
BstMAI GTCTC 2 cut(s) 503, 530
BstMBI GATC 5 cut(s) 123, 222, 253, 465, 563
BstMWI GCNNNNNNNGC 5 cut(s) 44, 53, 306, 315, 617
BstNI CCWGG 1 cut(s) 622
BstNSI RCATGY 1 cut(s) 340
BstSCI CCNGG 1 cut(s) 620
BstSFI CTRYAG 3 cut(s) 31, 42, 594
BstV1I GCAGC 5 cut(s) 17, 25, 440, 595, 617
BstV2I GAAGAC 2 cut(s) 880, 1082
BstX2I RGATCY 2 cut(s) 123, 253
BstYI RGATCY 2 cut(s) 123, 253
Bsu36I CCTNAGG 1 cut(s) 350
BsuRI GGCC 2 cut(s) 600, 1061
BtsCI GGATG 3 cut(s) 391, 416, 898
BtsI GCAGTG 1 cut(s) 313
BtsIMutI CAGTG 6 cut(s) 65, 147, 313, 360, 433, 435
Cac8I GCNNGC 1 cut(s) 265
CciI TCATGA 1 cut(s) 208
CfoI GCGC 2 cut(s) 311, 481
Cfr10I RCCGGY 1 cut(s) 280
CseI GACGC 1 cut(s) 904
Csp6I GTAC 6 cut(s) 433, 792, 869, 936, 991, 1069
CviQI GTAC 6 cut(s) 433, 792, 869, 936, 991, 1069
DdeI CTNAG 4 cut(s) 350, 503, 753, 1045
DinI GGCGCC 1 cut(s) 480
DpnI GATC 5 cut(s) 125, 224, 255, 467, 565
DpnII GATC 5 cut(s) 123, 222, 253, 465, 563
DraI TTTAAA 1 cut(s) 540
Eam1104I CTCTTC 1 cut(s) 321
EarI CTCTTC 1 cut(s) 321
Eco130I CCWWGG 1 cut(s) 171
Eco147I AGGCCT 2 cut(s) 600, 1061
Eco31I GGTCTC 1 cut(s) 530
Eco32I GATATC 1 cut(s) 816
Eco57I CTGAAG 1 cut(s) 409
Eco81I CCTNAGG 1 cut(s) 350
Eco88I CYCGRG 1 cut(s) 380
EcoRI GAATTC 2 cut(s) 661, 704
EcoRII CCWGG 1 cut(s) 620
EcoRV GATATC 1 cut(s) 816
EcoT14I CCWWGG 1 cut(s) 171
EgeI GGCGCC 1 cut(s) 480
EheI GGCGCC 1 cut(s) 480
ErhI CCWWGG 1 cut(s) 171
FaqI GGGAC 3 cut(s) 189, 427, 1022
FblI GTMKAC 1 cut(s) 156
Fnu4HI GCNGC 5 cut(s) 31, 39, 454, 606, 609
FokI GGATG 3 cut(s) 398, 403, 885
Fsp4HI GCNGC 5 cut(s) 31, 39, 454, 606, 609
FspBI CTAG 3 cut(s) 195, 485, 1013
GlaI GCGC 2 cut(s) 310, 480
GluI GCNGC 5 cut(s) 31, 39, 454, 606, 609
GsuI CTGGAG 1 cut(s) 1028
HaeII RGCGCY 1 cut(s) 482
HaeIII GGCC 2 cut(s) 600, 1061
HapII CCGG 2 cut(s) 281, 902
HgaI GACGC 1 cut(s) 904
HhaI GCGC 2 cut(s) 311, 481
Hin1I GRCGYC 1 cut(s) 479
Hin6I GCGC 2 cut(s) 309, 479
HinP1I GCGC 2 cut(s) 309, 479
HincII GTYRAC 1 cut(s) 907
HindII GTYRAC 1 cut(s) 907
HinfI GANTC 2 cut(s) 513, 925
HpaI GTTAAC 1 cut(s) 907
HpaII CCGG 2 cut(s) 281, 902
HphI GGTGA 3 cut(s) 251, 757, 1018
Hpy166II GTNNAC 5 cut(s) 157, 435, 712, 775, 907
Hpy188I TCNGA 6 cut(s) 258, 325, 530, 584, 915, 1048
Hpy188III TCNNGA 8 cut(s) 209, 352, 396, 485, 639, 709, 740, 892
Hpy8I GTNNAC 5 cut(s) 157, 435, 712, 775, 907
HpyAV CCTTC 3 cut(s) 433, 608, 1079
HpyCH4III ACNGT 2 cut(s) 439, 571
HpyCH4V TGCA 6 cut(s) 33, 300, 318, 548, 605, 821
HpyF10VI GCNNNNNNNGC 5 cut(s) 44, 53, 306, 315, 617
HpyF3I CTNAG 4 cut(s) 350, 503, 753, 1045
Hsp92I GRCGYC 1 cut(s) 479
HspAI GCGC 2 cut(s) 309, 479
KasI GGCGCC 1 cut(s) 478
KspAI GTTAAC 1 cut(s) 907
Kzo9I GATC 5 cut(s) 123, 222, 253, 465, 563
LmnI GCTCC 4 cut(s) 530, 590, 617, 1009
Lsp1109I GCAGC 5 cut(s) 17, 25, 440, 595, 617
LweI GCATC 2 cut(s) 366, 907
MaeI CTAG 3 cut(s) 195, 485, 1013
MaeIII GTNAC 3 cut(s) 247, 341, 697
MalI GATC 5 cut(s) 125, 224, 255, 467, 565
MboI GATC 5 cut(s) 123, 222, 253, 465, 563
MboII GAAGA 6 cut(s) 89, 133, 338, 689, 880, 1082
MfeI CAATTG 1 cut(s) 405
MflI RGATCY 2 cut(s) 123, 253
MhlI GDGCHC 1 cut(s) 726
MluCI AATT 7 cut(s) 198, 405, 642, 661, 671, 704, 1019
Mly113I GGCGCC 1 cut(s) 479
MlyI GAGTC 1 cut(s) 919
MroXI GAANNNNTTC 1 cut(s) 1089
MseI TTAA 3 cut(s) 539, 906, 1077
MslI CAYNNNNRTG 2 cut(s) 150, 826
MspA1I CMGCKG 1 cut(s) 608
MspI CCGG 2 cut(s) 281, 902
MspR9I CCNGG 1 cut(s) 622
MunI CAATTG 1 cut(s) 405
Mva1269I GAATGC 1 cut(s) 302
MvaI CCWGG 1 cut(s) 622
MwoI GCNNNNNNNGC 5 cut(s) 44, 53, 306, 315, 617
NarI GGCGCC 1 cut(s) 479
NdeII GATC 5 cut(s) 123, 222, 253, 465, 563
NlaIV GGNNCC 3 cut(s) 93, 480, 619
NmeAIII GCCGAG 1 cut(s) 455
NmuCI GTSAC 3 cut(s) 247, 341, 697
NspI RCATGY 1 cut(s) 340
PagI TCATGA 1 cut(s) 208
PceI AGGCCT 2 cut(s) 600, 1061
PciI ACATGT 1 cut(s) 336
PctI GAATGC 1 cut(s) 302
PdmI GAANNNNTTC 1 cut(s) 1089
PfeI GAWTC 1 cut(s) 513
PflFI GACNNNGTC 2 cut(s) 272, 491
PkrI GCNGC 5 cut(s) 32, 40, 455, 607, 610
PleI GAGTC 1 cut(s) 919
PluTI GGCGCC 1 cut(s) 482
PpsI GAGTC 1 cut(s) 919
PscI ACATGT 1 cut(s) 336
Psp6I CCWGG 1 cut(s) 620
PspGI CCWGG 1 cut(s) 620
PspN4I GGNNCC 3 cut(s) 93, 480, 619
PstI CTGCAG 1 cut(s) 35
PsuI RGATCY 2 cut(s) 123, 253
PsyI GACNNNGTC 2 cut(s) 272, 491
PvuII CAGCTG 1 cut(s) 608
RsaI GTAC 6 cut(s) 434, 793, 870, 937, 992, 1070
RsaNI GTAC 6 cut(s) 433, 792, 869, 936, 991, 1069
RseI CAYNNNNRTG 2 cut(s) 150, 826
SaqAI TTAA 3 cut(s) 539, 906, 1077
SatI GCNGC 5 cut(s) 31, 39, 454, 606, 609
Sau3AI GATC 5 cut(s) 123, 222, 253, 465, 563
SchI GAGTC 1 cut(s) 919
ScrFI CCNGG 1 cut(s) 622
SduI GDGCHC 1 cut(s) 726
SfaNI GCATC 2 cut(s) 366, 907
SfcI CTRYAG 3 cut(s) 31, 42, 594
SfoI GGCGCC 1 cut(s) 480
SmiMI CAYNNNNRTG 2 cut(s) 150, 826
SmlI CTYRAG 1 cut(s) 929
SmoI CTYRAG 1 cut(s) 929
Sse9I AATT 7 cut(s) 198, 405, 642, 661, 671, 704, 1019
SseBI AGGCCT 2 cut(s) 600, 1061
SspDI GGCGCC 1 cut(s) 478
SspMI CTAG 3 cut(s) 195, 485, 1013
StuI AGGCCT 2 cut(s) 600, 1061
StyD4I CCNGG 1 cut(s) 620
StyI CCWWGG 1 cut(s) 171
TaaI ACNGT 2 cut(s) 439, 571
TaqI TCGA 1 cut(s) 961
TaqII GACCGA 1 cut(s) 932
TasI AATT 7 cut(s) 198, 405, 642, 661, 671, 704, 1019
TatI WGTACW 4 cut(s) 432, 791, 990, 1068
TfiI GAWTC 1 cut(s) 513
Tru1I TTAA 3 cut(s) 539, 906, 1077
Tru9I TTAA 3 cut(s) 539, 906, 1077
TscAI CASTG 6 cut(s) 72, 154, 320, 367, 433, 442
TseFI GTSAC 3 cut(s) 247, 341, 697
TseI GCWGC 5 cut(s) 30, 38, 453, 605, 608
Tsp45I GTSAC 3 cut(s) 247, 341, 697
TspDTI ATGAA 5 cut(s) 123, 277, 434, 1010, 1012
TspGWI ACGGA 4 cut(s) 266, 716, 960, 980
TspRI CASTG 6 cut(s) 72, 154, 320, 367, 433, 442
Tth111I GACNNNGTC 2 cut(s) 272, 491
XapI RAATTY 5 cut(s) 198, 661, 671, 704, 1019
XbaI TCTAGA 1 cut(s) 484
XceI RCATGY 1 cut(s) 340
XmiI GTMKAC 1 cut(s) 156
XmnI GAANNNNTTC 1 cut(s) 1089
XspI CTAG 3 cut(s) 195, 485, 1013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.