Rh6DG214400

alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
38400189 .. 38403256
3068 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG214400.1

Sequence Viewer

Length: 1143 bp
ATGTCCAACACTGCTGGCAAGGTGATCAAGTGCAAAGCGGCGGTAGCCTGGGAAGCTGGGAAGCCGCTGGTTATTGAGGAAGTGGAGGTGGCACCACCCCAGAAACATGAAGTACGCTTGAAGATCCTCTTTACTGCTCTATGCCACACTGATGTATACTTCTGGGAAGCAAAGGGACAAAATCCACTGTTCCCTCGGATTTTTGGTCATGAAGCTGGAGGAATCGTGGAAAGCGTGGGTGAGGGTGTAACTGAACTCCAACCGGGAGACCATGTCCTCCCAGTTTTCACCGGAGAATGCAAGGAGTGTGCACATTGTAAGTCAGAGGAAAGCAACATGTGTGATCTCCTAAGGATTAATACCGACAGGGGTACTATGCTCAATGACGGCCAGACCCGGTTTTCCAAGGATGGAAAGCCAATTTATCACTTTGTTGGTACCTCTACATTCAGTGAATACACTGTTTCACATGTTGGTTCCGTTGCGAAGATCAACCCTGCAGCGCCTCTTGACAAAGTTTGTGTTCTTAGTTGCGGAATTTGTACAGGTTTTGGTGCAACTGTAAATGTTGCAAAGCCGAAAAAGGGTTCATCTGTTGCCATTTTTGGATTGGGTGCTGTTGGTCTTGCTGCTGCGGAAGGTGCAAGGGTTTCTAGGGCTTCAAGGATCATTGGAGTTGATCTGAACTCCAACCGATTTGAGGAAGCGAAGAAGTTTGGGGTGAGTGAATTTGTGAATCCAAAAGATCATAACAAACCTGTTCAGGAGGTGATTGCTGAGATGACCAATGGTGGAGTTGATAGGAGTGTTGAGTGCACTGGAAGCATCCAAGCTATGATCTCTGCCTTTGAATGTGTTCATGATGGTTGGGGAGTTGCTGTACTTGTTGGAGTGCCAAGCAAAGACGATGCATTCAAAACCCATCCGATGAACTTCTTGAATGAGAGGACTCTTAAGGGTACTTTCTATGGTAACTACAAGCCCCGCAGCGATCTACCTGGTGTTGTGGAGAAGTACATGAACAAGGAGATGGAATTGGACAAATTTATCACTCACTCTGTTCCTTTCTCTGAGATCAACAAGGCATTTGAGTACATGCTGGCAGGAGAGGGAATCCGGTGCATCGTCCGCATGGAGCATTAG

Protein Analysis

380

Amino Acids

41.32

Weight (kDa)

6.33

Isoelectric Point (pI)

32.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 35 - 164 2.5e-19 Alcohol dehydrogenase GroES-like domain
Glu_dehyd_C PF16912 197 - 365 5.6e-06 Glucose dehydrogenase C-terminus
ADH_zinc_N PF00107 206 - 337 2.5e-25 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 437
AccB1I GGYRCC 2 cut(s) 91, 437
AccI GTMKAC 1 cut(s) 156
AciI CCGC 7 cut(s) 38, 41, 65, 534, 635, 985, 1129
AclWI GGATC 2 cut(s) 118, 674
AcoI YGGCCR 1 cut(s) 388
AcsI RAATTY 3 cut(s) 537, 728, 1043
AfaI GTAC 8 cut(s) 114, 373, 439, 544, 882, 961, 1016, 1094
AfiI CCNNNNNNNGG 2 cut(s) 584, 700
AflII CTTAAG 1 cut(s) 953
AflIII ACRYGT 2 cut(s) 336, 469
AgsI TTSAA 5 cut(s) 121, 663, 851, 916, 940
AjnI CCWGG 2 cut(s) 47, 997
AluBI AGCT 3 cut(s) 56, 215, 833
AluI AGCT 3 cut(s) 56, 215, 833
Alw21I GWGCWC 2 cut(s) 313, 818
Alw26I GTCTC 1 cut(s) 261
Alw44I GTGCAC 2 cut(s) 309, 814
AlwI GGATC 2 cut(s) 118, 674
AoxI GGCC 1 cut(s) 388
ApaLI GTGCAC 2 cut(s) 309, 814
ApeKI GCWGC 4 cut(s) 500, 629, 632, 987
ApoI RAATTY 3 cut(s) 537, 728, 1043
AseI ATTAAT 1 cut(s) 357
Asp700I GAANNNNTTC 1 cut(s) 855
Asp718I GGTACC 1 cut(s) 437
AspLEI GCGC 1 cut(s) 505
AsuC2I CCSGG 2 cut(s) 264, 397
AsuHPI GGTGA 5 cut(s) 34, 251, 280, 733, 781
AxyI CCTNAGG 1 cut(s) 350
BaeGI GKGCMC 2 cut(s) 313, 818
BanI GGYRCC 2 cut(s) 91, 437
Bbv12I GWGCWC 2 cut(s) 313, 818
BbvI GCAGC 4 cut(s) 512, 616, 619, 999
BccI CCATC 4 cut(s) 404, 857, 930, 1024
BceAI ACGGC 1 cut(s) 403
BciT130I CCWGG 2 cut(s) 49, 999
BclI TGATCA 1 cut(s) 24
BcnI CCSGG 2 cut(s) 264, 397
BcoDI GTCTC 1 cut(s) 261
BfaI CTAG 1 cut(s) 654
BfmI CTRYAG 1 cut(s) 498
BfoI RGCGCY 1 cut(s) 506
BfrI CTTAAG 1 cut(s) 953
BisI GCNGC 6 cut(s) 39, 65, 501, 630, 633, 988
BlsI GCNGC 6 cut(s) 40, 66, 502, 631, 634, 989
Bme1390I CCNGG 4 cut(s) 49, 264, 397, 999
BmiI GGNNCC 3 cut(s) 93, 439, 478
BmrFI CCNGG 4 cut(s) 49, 264, 397, 999
BmrI ACTGGG 1 cut(s) 275
BmsI GCATC 3 cut(s) 834, 898, 1131
BmuI ACTGGG 1 cut(s) 275
BpmI CTGGAG 1 cut(s) 237
BpuMI CCSGG 2 cut(s) 264, 397
BsaI GGTCTC 1 cut(s) 261
BsaJI CCNNGG 3 cut(s) 48, 194, 405
BsaWI WCCGGW 2 cut(s) 290, 1116
BsaXI ACNNNNNCTCC 6 cut(s) 210, 240, 258, 288, 864, 894
Bsc4I CCNNNNNNNGG 2 cut(s) 584, 700
Bse1I ACTGG 2 cut(s) 281, 823
Bse21I CCTNAGG 1 cut(s) 350
BseBI CCWGG 2 cut(s) 49, 999
BseDI CCNNGG 3 cut(s) 48, 194, 405
BseGI GGATG 3 cut(s) 415, 825, 922
BseLI CCNNNNNNNGG 2 cut(s) 584, 700
BseMII CTCAG 2 cut(s) 768, 1062
BseNI ACTGG 2 cut(s) 281, 823
BseSI GKGCMC 2 cut(s) 313, 818
BseXI GCAGC 4 cut(s) 512, 616, 619, 999
BseYI CCCAGC 1 cut(s) 56
BshFI GGCC 1 cut(s) 390
BshNI GGYRCC 2 cut(s) 91, 437
BsiHKAI GWGCWC 2 cut(s) 313, 818
BsiSI CCGG 4 cut(s) 263, 291, 397, 1117
BslFI GGGAC 1 cut(s) 189
BslI CCNNNNNNNGG 2 cut(s) 584, 700
BsmAI GTCTC 1 cut(s) 261
BsmFI GGGAC 1 cut(s) 189
BsmI GAATGC 2 cut(s) 302, 911
BsnI GGCC 1 cut(s) 390
Bso31I GGTCTC 1 cut(s) 261
Bsp1286I GDGCHC 2 cut(s) 313, 818
Bsp1407I TGTACA 1 cut(s) 542
BspACI CCGC 7 cut(s) 38, 41, 65, 534, 635, 985, 1129
BspANI GGCC 1 cut(s) 390
BspCNI CTCAG 2 cut(s) 769, 1063
BspHI TCATGA 2 cut(s) 208, 859
BspLI GGNNCC 3 cut(s) 93, 439, 478
BspMAI CTGCAG 1 cut(s) 502
BspPI GGATC 2 cut(s) 118, 674
BspT107I GGYRCC 2 cut(s) 91, 437
BspTI CTTAAG 1 cut(s) 953
BspTNI GGTCTC 1 cut(s) 261
BsrGI TGTACA 1 cut(s) 542
BsrI ACTGG 2 cut(s) 281, 823
BssECI CCNNGG 3 cut(s) 48, 194, 405
BssNAI GTATAC 1 cut(s) 157
BssT1I CCWWGG 1 cut(s) 405
Bst1107I GTATAC 1 cut(s) 157
Bst2UI CCWGG 2 cut(s) 49, 999
Bst4CI ACNGT 3 cut(s) 189, 463, 562
BstAFI CTTAAG 1 cut(s) 953
BstAUI TGTACA 1 cut(s) 542
BstC8I GCNNGC 2 cut(s) 16, 1101
BstDEI CTNAG 4 cut(s) 350, 527, 777, 1071
BstF5I GGATG 3 cut(s) 415, 825, 922
BstH2I RGCGCY 1 cut(s) 506
BstHHI GCGC 1 cut(s) 505
BstMAI GTCTC 1 cut(s) 261
BstMWI GCNNNNNNNGC 5 cut(s) 44, 53, 641, 822, 1128
BstNI CCWGG 2 cut(s) 49, 999
BstNSI RCATGY 3 cut(s) 340, 473, 1099
BstSCI CCNGG 4 cut(s) 47, 262, 395, 997
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 2 cut(s) 313, 818
BstV1I GCAGC 4 cut(s) 512, 616, 619, 999
BstX2I RGATCY 1 cut(s) 123
BstYI RGATCY 1 cut(s) 123
BstZ17I GTATAC 1 cut(s) 157
Bsu36I CCTNAGG 1 cut(s) 350
BsuRI GGCC 1 cut(s) 390
BtsCI GGATG 3 cut(s) 415, 825, 922
BtsI GCAGTG 1 cut(s) 9
BtsIMutI CAGTG 6 cut(s) 9, 147, 185, 457, 459, 816
Cac8I GCNNGC 2 cut(s) 16, 1101
CciI TCATGA 2 cut(s) 208, 859
CfoI GCGC 1 cut(s) 505
CsiI ACCWGGT 1 cut(s) 997
Csp6I GTAC 8 cut(s) 113, 372, 438, 543, 881, 960, 1015, 1093
CviAII CATG 9 cut(s) 107, 209, 272, 337, 470, 860, 1018, 1096, 1132
CviQI GTAC 8 cut(s) 113, 372, 438, 543, 881, 960, 1015, 1093
DdeI CTNAG 4 cut(s) 350, 527, 777, 1071
EaeI YGGCCR 1 cut(s) 388
Eco130I CCWWGG 1 cut(s) 405
Eco31I GGTCTC 1 cut(s) 261
Eco81I CCTNAGG 1 cut(s) 350
EcoRII CCWGG 2 cut(s) 47, 997
EcoT14I CCWWGG 1 cut(s) 405
EcoT22I ATGCAT 1 cut(s) 913
ErhI CCWWGG 1 cut(s) 405
FaeI CATG 9 cut(s) 110, 212, 275, 340, 473, 863, 1021, 1099, 1135
FalI AAGNNNNNCTT 2 cut(s) 113, 145
FaqI GGGAC 1 cut(s) 189
FatI CATG 9 cut(s) 106, 208, 271, 336, 469, 859, 1017, 1095, 1131
FauI CCCGC 1 cut(s) 992
FbaI TGATCA 1 cut(s) 24
FblI GTMKAC 1 cut(s) 156
Fnu4HI GCNGC 6 cut(s) 39, 65, 501, 630, 633, 988
FokI GGATG 3 cut(s) 422, 812, 909
Fsp4HI GCNGC 6 cut(s) 39, 65, 501, 630, 633, 988
FspBI CTAG 1 cut(s) 654
GlaI GCGC 1 cut(s) 504
GluI GCNGC 6 cut(s) 39, 65, 501, 630, 633, 988
GsaI CCCAGC 1 cut(s) 60
GsuI CTGGAG 1 cut(s) 237
HaeII RGCGCY 1 cut(s) 506
HaeIII GGCC 1 cut(s) 390
HapII CCGG 4 cut(s) 263, 291, 397, 1117
HhaI GCGC 1 cut(s) 505
Hin1II CATG 9 cut(s) 110, 212, 275, 340, 473, 863, 1021, 1099, 1135
Hin6I GCGC 1 cut(s) 503
HinP1I GCGC 1 cut(s) 503
HinfI GANTC 4 cut(s) 222, 736, 949, 1113
HpaII CCGG 4 cut(s) 263, 291, 397, 1117
HphI GGTGA 5 cut(s) 34, 251, 280, 733, 781
Hpy166II GTNNAC 3 cut(s) 157, 311, 816
Hpy188I TCNGA 5 cut(s) 198, 325, 684, 927, 1072
Hpy188III TCNNGA 5 cut(s) 209, 509, 764, 860, 937
Hpy8I GTNNAC 3 cut(s) 157, 311, 816
HpyAV CCTTC 1 cut(s) 632
HpyCH4III ACNGT 3 cut(s) 189, 463, 562
HpyF10VI GCNNNNNNNGC 5 cut(s) 44, 53, 641, 822, 1128
HpyF3I CTNAG 4 cut(s) 350, 527, 777, 1071
Hsp92II CATG 9 cut(s) 110, 212, 275, 340, 473, 863, 1021, 1099, 1135
HspAI GCGC 1 cut(s) 503
KpnI GGTACC 1 cut(s) 441
Ksp22I TGATCA 1 cut(s) 24
LmnI GCTCC 1 cut(s) 1135
Lsp1109I GCAGC 4 cut(s) 512, 616, 619, 999
LweI GCATC 3 cut(s) 834, 898, 1131
MabI ACCWGGT 1 cut(s) 997
MaeI CTAG 1 cut(s) 654
MaeIII GTNAC 2 cut(s) 247, 971
MboII GAAGA 3 cut(s) 133, 499, 721
MflI RGATCY 1 cut(s) 123
MhlI GDGCHC 2 cut(s) 313, 818
MluCI AATT 5 cut(s) 420, 537, 728, 1034, 1043
MlyI GAGTC 1 cut(s) 943
MmeI TCCRAC 4 cut(s) 30, 283, 714, 868
Mph1103I ATGCAT 1 cut(s) 913
MroXI GAANNNNTTC 1 cut(s) 855
MseI TTAA 2 cut(s) 357, 954
MslI CAYNNNNRTG 1 cut(s) 150
MspA1I CMGCKG 1 cut(s) 67
MspCI CTTAAG 1 cut(s) 953
MspI CCGG 4 cut(s) 263, 291, 397, 1117
MspR9I CCNGG 4 cut(s) 49, 264, 397, 999
Mva1269I GAATGC 2 cut(s) 302, 911
MvaI CCWGG 2 cut(s) 49, 999
MwoI GCNNNNNNNGC 5 cut(s) 44, 53, 641, 822, 1128
NciI CCSGG 2 cut(s) 264, 397
NlaIII CATG 9 cut(s) 110, 212, 275, 340, 473, 863, 1021, 1099, 1135
NlaIV GGNNCC 3 cut(s) 93, 439, 478
NsiI ATGCAT 1 cut(s) 913
NspI RCATGY 3 cut(s) 340, 473, 1099
PagI TCATGA 2 cut(s) 208, 859
PciI ACATGT 2 cut(s) 336, 469
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PctI GAATGC 2 cut(s) 302, 911
PdmI GAANNNNTTC 1 cut(s) 855
PfeI GAWTC 3 cut(s) 222, 736, 1113
PflFI GACNNNGTC 1 cut(s) 272
PkrI GCNGC 6 cut(s) 40, 66, 502, 631, 634, 989
PleI GAGTC 1 cut(s) 943
PpsI GAGTC 1 cut(s) 943
PscI ACATGT 2 cut(s) 336, 469
PshBI ATTAAT 1 cut(s) 357
Psp6I CCWGG 2 cut(s) 47, 997
PspFI CCCAGC 1 cut(s) 56
PspGI CCWGG 2 cut(s) 47, 997
PspN4I GGNNCC 3 cut(s) 93, 439, 478
PstI CTGCAG 1 cut(s) 502
PsuI RGATCY 1 cut(s) 123
PsyI GACNNNGTC 1 cut(s) 272
RsaI GTAC 8 cut(s) 114, 373, 439, 544, 882, 961, 1016, 1094
RsaNI GTAC 8 cut(s) 113, 372, 438, 543, 881, 960, 1015, 1093
RseI CAYNNNNRTG 1 cut(s) 150
SaqAI TTAA 2 cut(s) 357, 954
SatI GCNGC 6 cut(s) 39, 65, 501, 630, 633, 988
SchI GAGTC 1 cut(s) 943
ScrFI CCNGG 4 cut(s) 49, 264, 397, 999
SduI GDGCHC 2 cut(s) 313, 818
SexAI ACCWGGT 1 cut(s) 997
SfaNI GCATC 3 cut(s) 834, 898, 1131
SfcI CTRYAG 1 cut(s) 498
SmiMI CAYNNNNRTG 1 cut(s) 150
SmlI CTYRAG 1 cut(s) 953
SmoI CTYRAG 1 cut(s) 953
Sse9I AATT 5 cut(s) 420, 537, 728, 1034, 1043
SsiI CCGC 7 cut(s) 38, 41, 65, 534, 635, 985, 1129
SspMI CTAG 1 cut(s) 654
StyD4I CCNGG 4 cut(s) 47, 262, 395, 997
StyI CCWWGG 1 cut(s) 405
TaaI ACNGT 3 cut(s) 189, 463, 562
TasI AATT 5 cut(s) 420, 537, 728, 1034, 1043
TatI WGTACW 4 cut(s) 542, 880, 1014, 1092
TauI GCSGC 2 cut(s) 41, 67
TfiI GAWTC 3 cut(s) 222, 736, 1113
Tru1I TTAA 2 cut(s) 357, 954
Tru9I TTAA 2 cut(s) 357, 954
TscAI CASTG 6 cut(s) 16, 154, 192, 457, 466, 823
TseI GCWGC 4 cut(s) 500, 629, 632, 987
TspDTI ATGAA 6 cut(s) 123, 225, 579, 848, 944, 1034
TspGWI ACGGA 1 cut(s) 469
TspRI CASTG 6 cut(s) 16, 154, 192, 457, 466, 823
Tth111I GACNNNGTC 1 cut(s) 272
Vha464I CTTAAG 1 cut(s) 953
VneI GTGCAC 2 cut(s) 309, 814
VspI ATTAAT 1 cut(s) 357
XapI RAATTY 3 cut(s) 537, 728, 1043
XceI RCATGY 3 cut(s) 340, 473, 1099
XcmI CCANNNNNNNNNTGG 1 cut(s) 607
XmiI GTMKAC 1 cut(s) 156
XmnI GAANNNNTTC 1 cut(s) 855
XspI CTAG 1 cut(s) 654
Zsp2I ATGCAT 1 cut(s) 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.