Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0000815

Physical Location & Seq

Genomic Coordinates Reverse (-)

1671994 .. 1675119

Gene Structure 3126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G018100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGTCTAAATCTAGTGCTGTTGGACAGGTCATACGCTGCAGAGCTGCTGTAGCATGGGAAGCAGGGAAGCCACTGGTGATTGAAGAAGTTGAGGTAGCACCACCACAGACAAATGAAGTTCGTTTGAAAATCCTTTATACCTCTTTGTGCCATACTGATGTCTACTTCTGGGAAGCCAAGGGACAAAAGCCTTTGTTTCCTAGAATTTATGGTCATGAGGCAGGAGGGATTGTGGAGAGTGTTGGTGAAGGCGTGACAGATCTTAAAGCCGGCGATCATGTCCTGCCTGTGTTCACAGGGGAATGCAAGGACTGTGCTCACTGTAAATCAGAAGAGAGCAACATGTGTGATCTCCTCAGGATAAACACTGACAGGGGAGTGATGCTGAGTGATGGGAAATCAAGATTTTCAATTAAAGGCAAGCCAATATACCACTTTGTTGGGACTTCCACCTTCAGTGAGTACACTGTTGTTCATGTTGGCTGCCTTGCCAAGATCAATCCCTTGGCTCCTCTGGACAAAGTCTGTGTCCTCAGTTGTGGTATCTCCACAGGTCTGGGAGCTACTCTTAATGTTGCAAAACCGAAAAAGGGATCAACAGTTGCTGTTTTTGGATTGGGAGCTGTAGGCCTTGCAGCTGCTGAAGGAGCCAGGATTTCTGGGGCTTCAAGAATTATTGGTGTTGATTTGAATTCCAGCAGATTTGAAGAGGCAAAAAAGTTTGGCGTAACCGAATTTGTGAACCCAAAGGACCACAAAAAGCCAGTTCAAGAGGTGATTGCTGAGCTGACCAATGGAGGAGTGGACAGAAGCGTTGAATGTACTGGAAATGTTGAAGCCATGATATCTGCATTTGAATGTGTCCATGATGGTTGGGGTGTTGCTGTTCTTGTGGGAGTACCACACAAAGAGGCCGTCTTCAAGACGCATCCCGTGAACTTTCTGAACGAGAGGACTCTCAAGGGTACCTTCTTCGGAAATTACAAGCCTCGAACCGACATTCCCTCTGTTGTGGAGAAGTACATGAATAATGAACTTGAGCTGGAAAAGTTCATCACCCACAAAGTCCCATTCTCAGAAATCAACAAGGCATTTGATTACATGCTTAAAGGGGAAGGTCTTCGATGCATAATCCACATGGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00010 ko00071 ko00350 ko00592 ko00625 ko00626 ko00830 ko00980 ko00982 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00071 map00350 map00592 map00625 map00626 map00830 map00980 map00982 map01100 map01110 map01120 map01130 map01220

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

383

Amino Acids

41.53

Weight (kDa)

6.65

Isoelectric Point (pI)

28.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77120
fragaria_vesca	FvH4_2g14750 FvH4_2g14750 FvH4_2g14760 FvH4_2g14760
malus_domestica	MD05G1013200.v1.1 MD05G1013400.v1.1 MD05G1179800.v1.1 MD05G1180800.v1.1 MD08G1068100.v1.1 MD09G1211500.v1.1 MD10G1013800.v1.1 MD10G1013900.v1.1 MD10G1014200.v1.1 MD10G1014500.v1.1 MD11G1004800.v1.1
prunus_persica	Prupe.8G018100_v2.0.a1 Prupe.8G018300_v2.0.a1 Prupe.8G018300_v2.0.a1 Prupe.8G018400_v2.0.a1 Prupe.8G018400_v2.0.a1 Prupe.8G018400_v2.0.a1 Prupe.8G018600_v2.0.a1 Prupe.8G207100_v2.0.a1 Prupe.8G207400_v2.0.a1
pyrus_communis	pycom05g00790 pycom05g16630 pycom10g00850 pycom10g00860 pycom10g00890
rosa_chinensis	RchiOBHm_Chr1g0331561 RchiOBHm_Chr6g0277181 RchiOBHm_Chr6g0277231 RchiOBHm_Chr6g0277261 RchiOBHm_Chr6g0277281 RchiOBHm_Chr6g0277311 RchiOBHm_Chr6g0277321
rosa_laevigata	RLG00000013310 RLG00000013311 RLG00000013312 RLG00000013313 RLG00000013319 RLG00000013325
rosa_multiflora	Rmu_co8243651.1_g000001 Rmu_sc0000030.1_g000028 Rmu_sc0000030.1_g000031 Rmu_sc0000030.1_g000035
rosa_roxburghii	Rroxscaffold_4G00319070 Rroxscaffold_7G00191450 Rroxscaffold_7G00191460 Rroxscaffold_7G00191470 Rroxscaffold_7G00191540
rosa_rugosa	Rorug01G0094000 Rorug01G0094100 Rorug06G0107000 Rorug06G0107100
rosa_samantha	Rh1BG090100 Rh1CG113500 Rh6BG221900 Rh6DG214200 Rh6DG214400 Rh6DG214700 Rh6DG214900
rosa_wichuraiana	Rw6G019010 Rw6G019020 Rw6G019030 Rw6G019040 Rw6G019080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	965
AccB1I	GGYRCC	1 cut(s)	965
AccI	GTMKAC	1 cut(s)	162
AclWI	GGATC	1 cut(s)	601
AcsI	RAATTY	3 cut(s)	204, 691, 734
AcuI	CTGAAG	2 cut(s)	439, 663
AfaI	GTAC	5 cut(s)	464, 823, 900, 967, 1022
AfiI	CCNNNNNNNGG	2 cut(s)	590, 1141
AflIII	ACRYGT	1 cut(s)	342
AjnI	CCWGG	1 cut(s)	650
AloI	GAACNNNNNNTCC	2 cut(s)	985, 1017
AluBI	AGCT	6 cut(s)	44, 563, 623, 638, 787, 1042
AluI	AGCT	6 cut(s)	44, 563, 623, 638, 787, 1042
Alw21I	GWGCWC	1 cut(s)	319
AlwI	GGATC	1 cut(s)	601
AlwNI	CAGNNNCTG	2 cut(s)	605, 641
AoxI	GGCC	2 cut(s)	628, 912
ApeKI	GCWGC	5 cut(s)	36, 44, 483, 635, 638
ApoI	RAATTY	3 cut(s)	204, 691, 734
ArsI	GACNNNNNNTTYG	4 cut(s)	513, 545, 900, 932
Asp700I	GAANNNNTTC	1 cut(s)	1119
Asp718I	GGTACC	1 cut(s)	965
AspS9I	GGNCC	1 cut(s)	751
AsuHPI	GGTGA	4 cut(s)	88, 257, 787, 1048
AvaII	GGWCC	1 cut(s)	751
AxyI	CCTNAGG	1 cut(s)	356
BanI	GGYRCC	1 cut(s)	965
BbsI	GAAGAC	2 cut(s)	910, 1112
Bbv12I	GWGCWC	1 cut(s)	319
BbvI	GCAGC	5 cut(s)	23, 31, 470, 625, 647
BccI	CCATC	2 cut(s)	386, 863
BceAI	ACGGC	1 cut(s)	899
BciT130I	CCWGG	1 cut(s)	652
BfaI	CTAG	2 cut(s)	12, 201
BfmI	CTRYAG	3 cut(s)	37, 48, 624
BglII	AGATCT	1 cut(s)	259
BisI	GCNGC	5 cut(s)	37, 45, 484, 636, 639
BlpI	GCTNAGC	1 cut(s)	783
BlsI	GCNGC	5 cut(s)	38, 46, 485, 637, 640
Bme1390I	CCNGG	1 cut(s)	652
Bme18I	GGWCC	1 cut(s)	751
BmgT120I	GGNCC	1 cut(s)	751
BmiI	GGNNCC	3 cut(s)	510, 649, 967
BmrFI	CCNGG	1 cut(s)	652
BmsI	GCATC	3 cut(s)	372, 937, 1115
BpiI	GAAGAC	2 cut(s)	910, 1112
Bpu1102I	GCTNAGC	1 cut(s)	783
BpuEI	CTTGAG	2 cut(s)	944, 1058
BsaJI	CCNNGG	2 cut(s)	177, 504
BsaXI	ACNNNNNCTCC	2 cut(s)	216, 246
Bsc4I	CCNNNNNNNGG	2 cut(s)	590, 1141
Bse118I	RCCGGY	1 cut(s)	269
Bse1I	ACTGG	3 cut(s)	78, 764, 829
Bse21I	CCTNAGG	1 cut(s)	356
BseBI	CCWGG	1 cut(s)	652
BseDI	CCNNGG	2 cut(s)	177, 504
BseGI	GGATG	1 cut(s)	928
BseLI	CCNNNNNNNGG	2 cut(s)	590, 1141
BseMII	CTCAG	5 cut(s)	370, 377, 547, 774, 1089
BseNI	ACTGG	3 cut(s)	78, 764, 829
BseRI	GAGGAG	3 cut(s)	344, 501, 813
BseXI	GCAGC	5 cut(s)	23, 31, 470, 625, 647
BshFI	GGCC	2 cut(s)	630, 914
BshNI	GGYRCC	1 cut(s)	965
BsiHKAI	GWGCWC	1 cut(s)	319
BsiSI	CCGG	1 cut(s)	270
BslFI	GGGAC	3 cut(s)	195, 457, 1052
BslI	CCNNNNNNNGG	2 cut(s)	590, 1141
BsmFI	GGGAC	3 cut(s)	195, 457, 1052
BsmI	GAATGC	1 cut(s)	308
BsnI	GGCC	2 cut(s)	630, 914
Bsp1286I	GDGCHC	1 cut(s)	319
Bsp143I	GATC	5 cut(s)	259, 274, 349, 495, 593
Bsp1720I	GCTNAGC	1 cut(s)	783
BspANI	GGCC	2 cut(s)	630, 914
BspCNI	CTCAG	5 cut(s)	369, 378, 546, 775, 1088
BspHI	TCATGA	1 cut(s)	214
BspLI	GGNNCC	3 cut(s)	510, 649, 967
BspMAI	CTGCAG	1 cut(s)	41
BspPI	GGATC	1 cut(s)	601
BspT107I	GGYRCC	1 cut(s)	965
BsrFI	RCCGGY	1 cut(s)	269
BsrI	ACTGG	3 cut(s)	78, 764, 829
BssAI	RCCGGY	1 cut(s)	269
BssECI	CCNNGG	2 cut(s)	177, 504
BssMI	GATC	5 cut(s)	259, 274, 349, 495, 593
BssT1I	CCWWGG	2 cut(s)	177, 504
Bst2UI	CCWGG	1 cut(s)	652
Bst4CI	ACNGT	4 cut(s)	314, 323, 469, 601
Bst6I	CTCTTC	2 cut(s)	327, 702
BstC8I	GCNNGC	2 cut(s)	271, 422
BstDEI	CTNAG	5 cut(s)	356, 386, 533, 783, 1075
BstF5I	GGATG	1 cut(s)	928
BstKTI	GATC	5 cut(s)	262, 277, 352, 498, 596
BstMBI	GATC	5 cut(s)	259, 274, 349, 495, 593
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 59, 647
BstNI	CCWGG	1 cut(s)	652
BstNSI	RCATGY	2 cut(s)	346, 1105
BstSCI	CCNGG	1 cut(s)	650
BstSFI	CTRYAG	3 cut(s)	37, 48, 624
BstV1I	GCAGC	5 cut(s)	23, 31, 470, 625, 647
BstV2I	GAAGAC	2 cut(s)	910, 1112
BstX2I	RGATCY	1 cut(s)	259
BstXI	CCANNNNNNTGG	2 cut(s)	440, 556
BstYI	RGATCY	1 cut(s)	259
Bsu36I	CCTNAGG	1 cut(s)	356
BsuRI	GGCC	2 cut(s)	630, 914
BtsCI	GGATG	1 cut(s)	928
BtsIMutI	CAGTG	5 cut(s)	71, 319, 366, 463, 465
Cac8I	GCNNGC	2 cut(s)	271, 422
CaiI	CAGNNNCTG	2 cut(s)	605, 641
CciI	TCATGA	1 cut(s)	214
Cfr10I	RCCGGY	1 cut(s)	269
Cfr13I	GGNCC	1 cut(s)	751
CseI	GACGC	1 cut(s)	934
Csp6I	GTAC	5 cut(s)	463, 822, 899, 966, 1021
CviQI	GTAC	5 cut(s)	463, 822, 899, 966, 1021
DdeI	CTNAG	5 cut(s)	356, 386, 533, 783, 1075
DpnI	GATC	5 cut(s)	261, 276, 351, 497, 595
DpnII	GATC	5 cut(s)	259, 274, 349, 495, 593
Eam1104I	CTCTTC	2 cut(s)	327, 702
EarI	CTCTTC	2 cut(s)	327, 702
Eco130I	CCWWGG	2 cut(s)	177, 504
Eco147I	AGGCCT	1 cut(s)	630
Eco32I	GATATC	1 cut(s)	846
Eco47I	GGWCC	1 cut(s)	751
Eco57I	CTGAAG	2 cut(s)	439, 663
Eco81I	CCTNAGG	1 cut(s)	356
EcoRI	GAATTC	1 cut(s)	691
EcoRII	CCWGG	1 cut(s)	650
EcoRV	GATATC	1 cut(s)	846
EcoT14I	CCWWGG	2 cut(s)	177, 504
EcoT22I	ATGCAT	1 cut(s)	1130
ErhI	CCWWGG	2 cut(s)	177, 504
FalI	AAGNNNNNCTT	2 cut(s)	953, 985
FaqI	GGGAC	3 cut(s)	195, 457, 1052
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	5 cut(s)	37, 45, 484, 636, 639
FokI	GGATG	1 cut(s)	915
Fsp4HI	GCNGC	5 cut(s)	37, 45, 484, 636, 639
FspBI	CTAG	2 cut(s)	12, 201
GluI	GCNGC	5 cut(s)	37, 45, 484, 636, 639
HaeIII	GGCC	2 cut(s)	630, 914
HapII	CCGG	1 cut(s)	270
HgaI	GACGC	1 cut(s)	934
HinfI	GANTC	1 cut(s)	955
HpaII	CCGG	1 cut(s)	270
HphI	GGTGA	4 cut(s)	88, 257, 787, 1048
Hpy166II	GTNNAC	6 cut(s)	163, 294, 465, 742, 805, 937
Hpy188I	TCNGA	4 cut(s)	331, 945, 977, 1078
Hpy188III	TCNNGA	7 cut(s)	215, 358, 402, 515, 669, 770, 922
Hpy8I	GTNNAC	6 cut(s)	163, 294, 465, 742, 805, 937
HpyAV	CCTTC	5 cut(s)	242, 463, 638, 979, 1109
HpyCH4III	ACNGT	4 cut(s)	314, 323, 469, 601
HpyCH4V	TGCA	6 cut(s)	39, 306, 578, 635, 851, 1128
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 59, 647
HpyF3I	CTNAG	5 cut(s)	356, 386, 533, 783, 1075
KpnI	GGTACC	1 cut(s)	969
KroI	GCCGGC	1 cut(s)	269
KroNI	GCCGGC	1 cut(s)	271
Kzo9I	GATC	5 cut(s)	259, 274, 349, 495, 593
LmnI	GCTCC	4 cut(s)	514, 560, 620, 647
Lsp1109I	GCAGC	5 cut(s)	23, 31, 470, 625, 647
LweI	GCATC	3 cut(s)	372, 937, 1115
MaeI	CTAG	2 cut(s)	12, 201
MaeIII	GTNAC	2 cut(s)	253, 727
MalI	GATC	5 cut(s)	261, 276, 351, 497, 595
MboI	GATC	5 cut(s)	259, 274, 349, 495, 593
MboII	GAAGA	6 cut(s)	95, 344, 719, 910, 964, 1112
MflI	RGATCY	1 cut(s)	259
MhlI	GDGCHC	1 cut(s)	319
MluCI	AATT	6 cut(s)	204, 411, 672, 691, 734, 979
MlyI	GAGTC	1 cut(s)	949
Mph1103I	ATGCAT	1 cut(s)	1130
MroNI	GCCGGC	1 cut(s)	269
MroXI	GAANNNNTTC	1 cut(s)	1119
MseI	TTAA	4 cut(s)	264, 414, 570, 1107
MslI	CAYNNNNRTG	2 cut(s)	156, 856
MspA1I	CMGCKG	1 cut(s)	638
MspI	CCGG	1 cut(s)	270
MspR9I	CCNGG	1 cut(s)	652
Mva1269I	GAATGC	1 cut(s)	308
MvaI	CCWGG	1 cut(s)	652
MwoI	GCNNNNNNNGC	3 cut(s)	50, 59, 647
NaeI	GCCGGC	1 cut(s)	271
NdeII	GATC	5 cut(s)	259, 274, 349, 495, 593
NgoMIV	GCCGGC	1 cut(s)	269
NlaIV	GGNNCC	3 cut(s)	510, 649, 967
NmuCI	GTSAC	1 cut(s)	253
NsiI	ATGCAT	1 cut(s)	1130
NspI	RCATGY	2 cut(s)	346, 1105
PagI	TCATGA	1 cut(s)	214
PceI	AGGCCT	1 cut(s)	630
PciI	ACATGT	1 cut(s)	342
PctI	GAATGC	1 cut(s)	308
PdiI	GCCGGC	1 cut(s)	271
PdmI	GAANNNNTTC	1 cut(s)	1119
PflFI	GACNNNGTC	1 cut(s)	521
PkrI	GCNGC	5 cut(s)	38, 46, 485, 637, 640
PleI	GAGTC	1 cut(s)	949
PpsI	GAGTC	1 cut(s)	949
PscI	ACATGT	1 cut(s)	342
Psp6I	CCWGG	1 cut(s)	650
PspGI	CCWGG	1 cut(s)	650
PspN4I	GGNNCC	3 cut(s)	510, 649, 967
PspPI	GGNCC	1 cut(s)	751
PstI	CTGCAG	1 cut(s)	41
PstNI	CAGNNNCTG	2 cut(s)	605, 641
PsuI	RGATCY	1 cut(s)	259
PsyI	GACNNNGTC	1 cut(s)	521
PvuII	CAGCTG	1 cut(s)	638
RsaI	GTAC	5 cut(s)	464, 823, 900, 967, 1022
RsaNI	GTAC	5 cut(s)	463, 822, 899, 966, 1021
RseI	CAYNNNNRTG	2 cut(s)	156, 856
SaqAI	TTAA	4 cut(s)	264, 414, 570, 1107
SatI	GCNGC	5 cut(s)	37, 45, 484, 636, 639
Sau3AI	GATC	5 cut(s)	259, 274, 349, 495, 593
Sau96I	GGNCC	1 cut(s)	751
SchI	GAGTC	1 cut(s)	949
ScrFI	CCNGG	1 cut(s)	652
SduI	GDGCHC	1 cut(s)	319
SfaNI	GCATC	3 cut(s)	372, 937, 1115
SfcI	CTRYAG	3 cut(s)	37, 48, 624
SinI	GGWCC	1 cut(s)	751
SmiMI	CAYNNNNRTG	2 cut(s)	156, 856
SmlI	CTYRAG	2 cut(s)	959, 1037
SmoI	CTYRAG	2 cut(s)	959, 1037
Sse9I	AATT	6 cut(s)	204, 411, 672, 691, 734, 979
SseBI	AGGCCT	1 cut(s)	630
SspMI	CTAG	2 cut(s)	12, 201
StuI	AGGCCT	1 cut(s)	630
StyD4I	CCNGG	1 cut(s)	650
StyI	CCWWGG	2 cut(s)	177, 504
TaaI	ACNGT	4 cut(s)	314, 323, 469, 601
TaqI	TCGA	2 cut(s)	991, 1123
TasI	AATT	6 cut(s)	204, 411, 672, 691, 734, 979
TatI	WGTACW	3 cut(s)	462, 821, 1020
Tru1I	TTAA	4 cut(s)	264, 414, 570, 1107
Tru9I	TTAA	4 cut(s)	264, 414, 570, 1107
TscAI	CASTG	5 cut(s)	78, 326, 373, 463, 472
TseFI	GTSAC	1 cut(s)	253
TseI	GCWGC	5 cut(s)	36, 44, 483, 635, 638
Tsp45I	GTSAC	1 cut(s)	253
TspDTI	ATGAA	5 cut(s)	129, 464, 1040, 1042, 1047
TspRI	CASTG	5 cut(s)	78, 326, 373, 463, 472
Tth111I	GACNNNGTC	1 cut(s)	521
VpaK11BI	GGWCC	1 cut(s)	751
XapI	RAATTY	3 cut(s)	204, 691, 734
XceI	RCATGY	2 cut(s)	346, 1105
XcmI	CCANNNNNNNNNTGG	1 cut(s)	799
XmiI	GTMKAC	1 cut(s)	162
XmnI	GAANNNNTTC	1 cut(s)	1119
XspI	CTAG	2 cut(s)	12, 201
Zsp2I	ATGCAT	1 cut(s)	1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.