FvH4_2g20300
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
17064938 .. 17072074
7137 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g20300.t2

Sequence Viewer

Length: 4281 bp
ATGGAGATCATCAGCTGTGACCTTGAAAGAGCAGGTCACAGTTTCACCAGAAGCGGTTCGTTTTGGACTGACAATGGCAGGGCAGTTTTCTCAGCATCTTCAATTGGAGAAGACGATGAGGAAGCTCTCAAATGGGCAGCTCTGCAGAGGCTGCCTACCTTCGCTCGTTTGAAAAAAGGGTTGCTCACTTCTCCTCAAGGCCATGCCAGCGAAGTCGACCTGCAGCACCTTGAGCTGCAAGAAAGGAAAGACTTGATTGAGAGGCTGGTGGGAGTTGCTGAGGAGGATCATGAGAAATTCTTGTTGAGGCTCAAGAGCCGGATCGATAGAGTTGGAATTAGTCTTCCTACAATTGAAGTTAGGTTCGAGCATTTGAAAATTGCAGCTGAAACTCATGTTGGGGGCAGGGCTCTGCCTTCTGTCTTCAATTATTGTGTTAATGTAGTGGAGGGTTTCTTGAATTGCCTGCACATTCTTCCTCAAAAGAAGGAACATGTTTCTATACTCAAAGATGTCAGTGGGATCATCAAGCCTTGCAGAATGACATTGCTTTTGGGTCCTCCAAGTTCGGGGAAGACCACGCTGTTGCTGGCTTTGGCCGGAGAGCTTGATAAGGATCTCAAGGTTTCTGGAAATGTGACTTACAATGGTCATGGCATGCATGAGTTTGTGCCTCAGAGAACTGCTGTATATATCAGTCAACATGATGTTCATATTCCAGAAATGACAGTTGGAGAAACCTTGGCTTTTTCAGCAAGATGCCAAGGGGTCGGAGCTCGTTATGAGATGCTAGTAGAGTTAAGTAGAAGAGAGAAAGAAGCAAGTATTAAGCCAGATCCTGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGCCAAAGGGCAACATTTATGACAAATTACATTCTAAAGGTGTTGGGATTGGATGGCTGTGCAGATACCTTGGTAGGGGATCAATTATTAAGGGGTATCTCTGGAGGACAAAAGAAGCGAGTCACAACTGGTGAAATGTTGGTTGGACCTTCGAAGGCACTATTTATGGATGAAATATCGACTGGTCTGGATAGTTCAACAACTTATCAAATAGTGAATTCCATCAAGCAATATGTTCACATTCTCCAAGGGACTGCATTCATCTCACTACTGCAGCCAGCCCCTGAGACTTATGATCTATTTGATGATATTATACTTCTTTCTGATGGTCAGATTGTGTATCAAGGACCCCGTGAACATGTCCTCGGTTTTTTTGAGTCTATGGGATTCAGATGTCCTGAGAGAAAAGGTGTGGCCGATTTCCTGCAAGAAGTAACCTCAAGGAAAGATCAGGAGCAGTATTGGGCTAGCAGAGATGAACCTTACAGGTTTATCACAGTCGAAGAATTTTCCCAAGCATTCCAATCTTTTCATGTAGGGCGCGCAATTACACATGAACTTGCAACTCCATTTGACAAGACCAAGAGCCATTCAGCCGCATTAACAACAAAAAAATATGGTGTTAAAAGAGCAGAACTATTTAAAGCTTGTTTCTCAAGGGAGTTCTTGCTTATGAAGAGGAATTCATTTGTTTACCTTTTCAAGCTAATCCAACTCTCAATATTGTCTCTGATTACAATGACACTATTCCTACGAACTGAGATGCACCGCGATTCAGTAATTAATGGAGGAATTTATGCTGGCGCATTATTCTTCTCCTTGGTTGCTGTTATGTTCAATGGAATGGCAGAGCTCTCAATGACTATAGCCAAGCTTCCAGTATTTTATAAGCATAGAAAGCTGCTCTTCTTTCCACCATGGGCATATGCACTTCCATCATGGCTCCTCAAGATCCCTCTCACCTGTGTTGAAGTTGGTGTTTGGGTGTTTATCACCTATTATGTCATTGGATTTGATCCAAATGTTGGAAGGTTGTTTAAGCAATATCTTCTCCTCTTACTCATGAATCAAATGGCTTCTGGATTATTCCGATTCATTGCTGGAGTAGGTAGAAGCTTGACTGTTGCTAATACATTTGGCTCATTTGCACTAGTCATGCTTTTCGCTTTGGGCGGCTTTGTCCTGTCAAGAGATGATATAAAGAAATGGTGGATATGGGGTTACTGGATATCGCCTTTGATGTATGGACAAAATGCAATTGTAGTCAATGAATTCCTGGGCAAGAGTTGGTCACATGTTCTTCCCGGCTCAAATGAATCATTAGGAGTTGAAATTCTGAAGTCTCGGGGATTTCGTACACACGCATATTGGTATTGGATTGGTGCAGGAGCATTGGCTGGATACATGCTCTTTTTCAACGTTTGTTACGCTCTGGCTCTCACTTTTCTAAACCCTTTGGACAAGCCACAAGGTGTTAAATCAGCACAATCTCAAGGCAATAAAGATGATGACAAGAGCTTGACTCCTCGAATCAGCAAAGAGAAAGGAGATGGTAGTACTACTGATAACACGAAAAGAGGAATGGTTCTTCCATTTGAACCATATTCCATCACCTTTGATGAAATTTCATACTCAGTGGACATGCCACAGGAAATGAAGAACCAAGGTATTCCTGAGGATAAATTGGTGCTCCTCAGGCGAGTGAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCTCTGATGGGAGTGAGTGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGGAAAACTGGAGGCTACATAGAGGGAAATATCACAATTTCTGGCCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAATCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATTGATTCAGAAACAAGGAAGATGTTTGTCGAGGAAGTAATGGCCCTTGTGGAGTTGGATCCCTTAAGGCAAGCACTAGTAGGATTACCTGGTGCCAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACAATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACTTCTGGCCTAGATGCAAGAGCTGCTGCGATTGTTATGAGAACAGTTAGAAATACTGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAACCAAGCATCGATATATTTGAATCTTTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTAGGGCCATTGGGGCGTCATTCTTGCCATTTAATCAAGTATTTTGAGGGAATTGATAATGTCAGTAAGATTAAGGATGGCTATAATCCAGCAACTTGGATGTTGGAAGTCACCAGTTCCGCCAAAGAAATAGCTTTAGGTGTTGATTTTTCTGATATTTATAAAAAATCAGATCTATACAGGAGAAACAAAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGGTTCGAAGGACCTGTATTTCCCTACTCAATATTCTCAGCCATTTGTCACACAATGCATGGCTTGCTTATGGAAACAACATTGGTCGTATTGGCGAAATCCAGCATACACTGCCATAAAGTTGATATACACCACCATCATAGCCTTAATGTTGGGAACAATGTTCTGGGACCTCGGCTCCAAAACGGAAAATCAACAGGATCTCTTTAATGCAATTGGTTCCATGTATGCTGCTGTCCTCTTTCTCGGTATTAAGAATTCAACAACAGTTCAGCCAGTAGTTTCTATCGAACGAACAGTCTTTTATAGAGAACGTGCTGCTGGAATGTATTCTCCATTGGCTTATGCATTTTCACAGGTTGCAATTGAGCTGCCTTATATTTTCGCCCAAACAATTCTCTATGGTGTCATAGTTTATGCAATGATCGGATTTGAGTGGACTGTACCTAAATTCTTTTGGTACCTATTTTTCATGTATTTCACATTTCTGTACTTCACCTTTTATGGTATGATGGGAGTGGCCTTCACACCGAACCAGCACGTTGCTGCTATAAGTTCTAGTGCATTTTATGCAGTATGGAATGTCTTCTCCGGGTTCTTAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGCATGTCCAATGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATCTACAGAACAAGCTTGAGTCGGGCGAAACTGTGGAAGAATTTATGAGGACGTACTTTGGCTTCAAACATGAATTTCTAGGAGTGGTTGCAGCAGCAGTTGCTGGATTTGCAGTACTCTTTGCATTTGTCTTTGCCTTTTCGATCAAGATGTTGAATTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1427

Amino Acids

160.72

Weight (kDa)

7.95

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 169 - 350 1.8e-15 ABC transporter
ABC2_membrane PF01061 505 - 717 7.3e-52 ABC-2 type transporter
PDR_assoc PF08370 722 - 783 2.3e-26 Plant PDR ABC transporter associated
ABC_tran PF00005 857 - 1009 2.9e-21 ABC transporter
ABC2_membrane PF01061 1154 - 1368 5.4e-59 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1764, 3348
Acc36I ACCTGC 3 cut(s) 23, 228, 2839
Acc65I GGTACC 1 cut(s) 3870
AccB1I GGYRCC 2 cut(s) 2930, 3870
AccB7I CCANNNNNTGG 2 cut(s) 1901, 3026
AccI GTMKAC 1 cut(s) 216
AccII CGCG 2 cut(s) 1419, 1647
AciI CCGC 5 cut(s) 54, 1473, 1645, 2049, 3306
AclI AACGTT 1 cut(s) 2295
AcoI YGGCCR 3 cut(s) 597, 1290, 2710
AcuI CTGAAG 2 cut(s) 2234, 3182
AcyI GRCGYC 1 cut(s) 3202
AdeI CACNNNGTG 1 cut(s) 2348
AfiI CCNNNNNNNGG 5 cut(s) 569, 951, 1901, 3026, 3410
AflII CTTAAG 1 cut(s) 2902
AflIII ACRYGT 4 cut(s) 493, 1234, 2170, 2782
AhlI ACTAGT 3 cut(s) 2026, 2914, 2983
AjnI CCWGG 4 cut(s) 2151, 2596, 2926, 3409
AjuI GAANNNNNNNTTGG 6 cut(s) 381, 413, 714, 746, 1002, 1034
AloI GAACNNNNNNTCC 2 cut(s) 4012, 4044
Alw21I GWGCWC 5 cut(s) 778, 1731, 2568, 3107, 3401
Alw26I GTCTC 4 cut(s) 1157, 1608, 2223, 2945
Alw44I GTGCAC 1 cut(s) 3103
AlwNI CAGNNNCTG 4 cut(s) 151, 839, 1160, 4211
Ama87I CYCGRG 1 cut(s) 2220
AoxI GGCC 9 cut(s) 199, 597, 1290, 2594, 2710, 2880, 3028, 3191, 3930
ApaLI GTGCAC 1 cut(s) 3103
ArsI GACNNNNNNTTYG 4 cut(s) 535, 567, 3693, 3725
AseI ATTAAT 1 cut(s) 1659
Asp700I GAANNNNTTC 3 cut(s) 55, 3739, 3995
Asp718I GGTACC 1 cut(s) 3870
AspLEI GCGC 3 cut(s) 1419, 1421, 1682
AspS9I GGNCC 7 cut(s) 557, 1022, 1223, 2881, 3191, 3421, 3580
AsuC2I CCSGG 2 cut(s) 2181, 4003
AsuHPI GGTGA 7 cut(s) 37, 1019, 1828, 1861, 2479, 3289, 3898
AsuII TTCGAA 2 cut(s) 1028, 3416
AsuNHI GCTAGC 1 cut(s) 1343
AvaI CYCGRG 1 cut(s) 2220
AvaII GGWCC 5 cut(s) 557, 1022, 1223, 3421, 3580
AxyI CCTNAGG 2 cut(s) 2550, 2570
BaeGI GKGCMC 1 cut(s) 3107
BaeI ACNNNNGTAYC 2 cut(s) 933, 966
BalI TGGCCA 1 cut(s) 2712
BamHI GGATCC 1 cut(s) 2896
BanI GGYRCC 2 cut(s) 2930, 3870
BanII GRGCYC 3 cut(s) 412, 778, 1731
BarI GAAGNNNNNNTAC 2 cut(s) 4154, 4186
BbsI GAAGAC 5 cut(s) 117, 335, 415, 581, 3988
Bbv12I GWGCWC 5 cut(s) 778, 1731, 2568, 3107, 3401
BbvCI CCTCAGC 1 cut(s) 279
BciT130I CCWGG 4 cut(s) 2153, 2598, 2928, 3411
BciVI GTATCC 2 cut(s) 2270, 2744
BcnI CCSGG 2 cut(s) 2181, 4003
BcoDI GTCTC 4 cut(s) 1157, 1608, 2223, 2945
BcuI ACTAGT 3 cut(s) 2026, 2914, 2983
BfmI CTRYAG 6 cut(s) 143, 221, 1148, 1740, 2832, 4112
BfrI CTTAAG 1 cut(s) 2902
BfuAI ACCTGC 3 cut(s) 23, 228, 2839
BfuI GTATCC 2 cut(s) 2270, 2744
BglI GCCNNNNNGGC 1 cut(s) 3199
BglII AGATCT 2 cut(s) 3358, 4108
BmcAI AGTACT 2 cut(s) 2434, 4224
Bme1390I CCNGG 6 cut(s) 2153, 2181, 2598, 2928, 3411, 4003
Bme18I GGWCC 5 cut(s) 557, 1022, 1223, 3421, 3580
BmeT110I CYCGRG 1 cut(s) 2220
BmgT120I GGNCC 7 cut(s) 557, 1022, 1223, 2881, 3191, 3421, 3580
BmiI GGNNCC 9 cut(s) 558, 1225, 1820, 2898, 2932, 3581, 3589, 3631, 3872
BmrFI CCNGG 6 cut(s) 2153, 2181, 2598, 2928, 3411, 4003
BmsI GCATC 7 cut(s) 104, 749, 777, 878, 1629, 3025, 3132
BmtI GCTAGC 1 cut(s) 1347
BpiI GAAGAC 5 cut(s) 117, 335, 415, 581, 3988
BplI GAGNNNNNCTC 4 cut(s) 2383, 2415, 3388, 3420
BpmI CTGGAG 4 cut(s) 999, 1998, 2697, 3393
Bpu10I CCTNAGC 1 cut(s) 279
Bpu14I TTCGAA 2 cut(s) 1028, 3416
BpuEI CTTGAG 9 cut(s) 180, 251, 296, 605, 1300, 1516, 1808, 2352, 4145
BpuMI CCSGG 2 cut(s) 2181, 4003
Bsa29I ATCGAT 2 cut(s) 324, 3126
BsaAI YACGTR 1 cut(s) 3187
BsaBI GATNNNNATC 1 cut(s) 615
BsaHI GRCGYC 1 cut(s) 3202
BsaI GGTCTC 1 cut(s) 2945
BsaWI WCCGGW 1 cut(s) 3086
BsaXI ACNNNNNCTCC 4 cut(s) 3391, 3421, 3572, 3602
Bsc4I CCNNNNNNNGG 5 cut(s) 569, 951, 1901, 3026, 3410
Bse1I ACTGG 7 cut(s) 1009, 1063, 1754, 2105, 2680, 3300, 3686
Bse21I CCTNAGG 2 cut(s) 2550, 2570
Bse3DI GCAATG 3 cut(s) 545, 1971, 3837
Bse8I GATNNNNATC 1 cut(s) 615
BseBI CCWGG 4 cut(s) 2153, 2598, 2928, 3411
BseCI ATCGAT 2 cut(s) 324, 3126
BseGI GGATG 7 cut(s) 934, 1051, 2659, 2769, 3019, 3268, 3291
BseJI GATNNNNATC 1 cut(s) 615
BseLI CCNNNNNNNGG 5 cut(s) 569, 951, 1901, 3026, 3410
BseMI GCAATG 3 cut(s) 545, 1971, 3837
BseNI ACTGG 7 cut(s) 1009, 1063, 1754, 2105, 2680, 3300, 3686
BsePI GCGCGC 1 cut(s) 1417
BseRI GAGGAG 7 cut(s) 183, 296, 1811, 1919, 2391, 2558, 3396
BseSI GKGCMC 1 cut(s) 3107
BsgI GTGCAG 3 cut(s) 452, 957, 2280
Bsh1236I CGCG 2 cut(s) 1419, 1647
BshFI GGCC 9 cut(s) 201, 599, 1292, 2596, 2712, 2882, 3030, 3193, 3932
BshNI GGYRCC 2 cut(s) 2930, 3870
BshVI ATCGAT 2 cut(s) 324, 3126
BsiHKAI GWGCWC 5 cut(s) 778, 1731, 2568, 3107, 3401
BsiHKCI CYCGRG 1 cut(s) 2220
BsiSI CCGG 5 cut(s) 319, 600, 2181, 3087, 4002
BslFI GGGAC 2 cut(s) 1141, 3593
BslI CCNNNNNNNGG 5 cut(s) 569, 951, 1901, 3026, 3410
BsmAI GTCTC 4 cut(s) 1157, 1608, 2223, 2945
BsmFI GGGAC 2 cut(s) 1141, 3593
BsmI GAATGC 2 cut(s) 1133, 1394
BsnI GGCC 9 cut(s) 201, 599, 1292, 2596, 2712, 2882, 3030, 3193, 3932
Bso31I GGTCTC 1 cut(s) 2945
BsoBI CYCGRG 1 cut(s) 2220
Bsp119I TTCGAA 2 cut(s) 1028, 3416
Bsp1286I GDGCHC 6 cut(s) 412, 778, 1731, 2568, 3107, 3401
Bsp19I CCATGG 1 cut(s) 1793
BspACI CCGC 5 cut(s) 54, 1473, 1645, 2049, 3306
BspANI GGCC 9 cut(s) 201, 599, 1292, 2596, 2712, 2882, 3030, 3193, 3932
BspDI ATCGAT 2 cut(s) 324, 3126
BspFNI CGCG 2 cut(s) 1419, 1647
BspHI TCATGA 2 cut(s) 289, 1938
BspLI GGNNCC 9 cut(s) 558, 1225, 1820, 2898, 2932, 3581, 3589, 3631, 3872
BspMAI CTGCAG 4 cut(s) 147, 225, 1152, 2836
BspMI ACCTGC 3 cut(s) 23, 228, 2839
BspOI GCTAGC 1 cut(s) 1347
BspQI GCTCTTC 1 cut(s) 1787
BspT104I TTCGAA 2 cut(s) 1028, 3416
BspT107I GGYRCC 2 cut(s) 2930, 3870
BspTI CTTAAG 1 cut(s) 2902
BspTNI GGTCTC 1 cut(s) 2945
BsrDI GCAATG 3 cut(s) 545, 1971, 3837
BsrI ACTGG 7 cut(s) 1009, 1063, 1754, 2105, 2680, 3300, 3686
BssHII GCGCGC 1 cut(s) 1417
BssNI GRCGYC 1 cut(s) 3202
BssT1I CCWWGG 7 cut(s) 741, 763, 945, 1123, 1695, 1793, 2539
Bst2UI CCWGG 4 cut(s) 2153, 2598, 2928, 3411
Bst6I CTCTTC 3 cut(s) 802, 1547, 1787
BstACI GRCGYC 1 cut(s) 3202
BstAFI CTTAAG 1 cut(s) 2902
BstAPI GCANNNNNTGC 6 cut(s) 151, 3044, 3474, 3521, 3980, 4208
BstBAI YACGTR 1 cut(s) 3187
BstBI TTCGAA 2 cut(s) 1028, 3416
BstDSI CCRYGG 1 cut(s) 1793
BstENI CCTNNNNNAGG 1 cut(s) 3408
BstF5I GGATG 7 cut(s) 934, 1051, 2659, 2769, 3019, 3268, 3291
BstFNI CGCG 2 cut(s) 1419, 1647
BstHHI GCGC 3 cut(s) 1419, 1421, 1682
BstMAI GTCTC 4 cut(s) 1157, 1608, 2223, 2945
BstNI CCWGG 4 cut(s) 2153, 2598, 2928, 3411
BstNSI RCATGY 8 cut(s) 497, 661, 1238, 2174, 2284, 2521, 2786, 4062
BstSCI CCNGG 6 cut(s) 2151, 2179, 2596, 2926, 3409, 4001
BstSFI CTRYAG 6 cut(s) 143, 221, 1148, 1740, 2832, 4112
BstSLI GKGCMC 1 cut(s) 3107
BstSNI TACGTA 1 cut(s) 3187
BstUI CGCG 2 cut(s) 1419, 1647
BstV2I GAAGAC 5 cut(s) 117, 335, 415, 581, 3988
BstX2I RGATCY 7 cut(s) 616, 835, 1827, 2896, 3358, 3610, 4108
BstXI CCANNNNNNTGG 2 cut(s) 3282, 4071
BstYI RGATCY 7 cut(s) 616, 835, 1827, 2896, 3358, 3610, 4108
Bsu15I ATCGAT 2 cut(s) 324, 3126
Bsu36I CCTNAGG 2 cut(s) 2550, 2570
BsuI GTATCC 2 cut(s) 2270, 2744
BsuRI GGCC 9 cut(s) 201, 599, 1292, 2596, 2712, 2882, 3030, 3193, 3932
BsuTUI ATCGAT 2 cut(s) 324, 3126
BtgI CCRYGG 1 cut(s) 1793
BtsCI GGATG 7 cut(s) 934, 1051, 2659, 2769, 3019, 3268, 3291
BtsI GCAGTG 1 cut(s) 3519
BtsIMutI CAGTG 3 cut(s) 523, 2517, 3519
BveI ACCTGC 3 cut(s) 23, 228, 2839
CaiI CAGNNNCTG 4 cut(s) 151, 839, 1160, 4211
CciI TCATGA 2 cut(s) 289, 1938
CfoI GCGC 3 cut(s) 1419, 1421, 1682
Cfr13I GGNCC 7 cut(s) 557, 1022, 1223, 2881, 3191, 3421, 3580
ClaI ATCGAT 2 cut(s) 324, 3126
CseI GACGC 1 cut(s) 3191
CsiI ACCWGGT 1 cut(s) 2926
DraI TTTAAA 1 cut(s) 1519
DraIII CACNNNGTG 1 cut(s) 2348
EaeI YGGCCR 3 cut(s) 597, 1290, 2710
Eam1104I CTCTTC 3 cut(s) 802, 1547, 1787
EarI CTCTTC 3 cut(s) 802, 1547, 1787
EciI GGCGGA 1 cut(s) 3295
Ecl136II GAGCTC 2 cut(s) 776, 1729
Eco105I TACGTA 1 cut(s) 3187
Eco130I CCWWGG 7 cut(s) 741, 763, 945, 1123, 1695, 1793, 2539
Eco24I GRGCYC 3 cut(s) 412, 778, 1731
Eco31I GGTCTC 1 cut(s) 2945
Eco32I GATATC 2 cut(s) 850, 2106
Eco47I GGWCC 5 cut(s) 557, 1022, 1223, 3421, 3580
Eco53kI GAGCTC 2 cut(s) 776, 1729
Eco57I CTGAAG 2 cut(s) 2234, 3182
Eco81I CCTNAGG 2 cut(s) 2550, 2570
Eco88I CYCGRG 1 cut(s) 2220
EcoICRI GAGCTC 2 cut(s) 776, 1729
EcoNI CCTNNNNNAGG 1 cut(s) 3408
EcoO109I RGGNCCY 4 cut(s) 557, 1223, 3421, 3580
EcoRI GAATTC 4 cut(s) 1093, 1558, 2147, 3667
EcoRII CCWGG 4 cut(s) 2151, 2596, 2926, 3409
EcoRV GATATC 2 cut(s) 850, 2106
EcoT14I CCWWGG 7 cut(s) 741, 763, 945, 1123, 1695, 1793, 2539
EcoT22I ATGCAT 3 cut(s) 663, 3470, 3760
EcoT38I GRGCYC 3 cut(s) 412, 778, 1731
ErhI CCWWGG 7 cut(s) 741, 763, 945, 1123, 1695, 1793, 2539
FalI AAGNNNNNCTT 2 cut(s) 1766, 1798
FaqI GGGAC 2 cut(s) 1141, 3593
FauNDI CATATG 1 cut(s) 1801
FblI GTMKAC 1 cut(s) 216
FokI GGATG 7 cut(s) 941, 1058, 2666, 2756, 3026, 3275, 3298
FriOI GRGCYC 3 cut(s) 412, 778, 1731
GlaI GCGC 3 cut(s) 1418, 1420, 1681
GsuI CTGGAG 4 cut(s) 999, 1998, 2697, 3393
HaeIII GGCC 9 cut(s) 201, 599, 1292, 2596, 2712, 2882, 3030, 3193, 3932
HapII CCGG 5 cut(s) 319, 600, 2181, 3087, 4002
HgaI GACGC 1 cut(s) 3191
HhaI GCGC 3 cut(s) 1419, 1421, 1682
Hin1I GRCGYC 1 cut(s) 3202
Hin6I GCGC 3 cut(s) 1417, 1419, 1680
HinP1I GCGC 3 cut(s) 1417, 1419, 1680
HincII GTYRAC 2 cut(s) 217, 701
HindII GTYRAC 2 cut(s) 217, 701
HindIII AAGCTT 4 cut(s) 1521, 1748, 1990, 4121
HpaII CCGG 5 cut(s) 319, 600, 2181, 3087, 4002
HphI GGTGA 7 cut(s) 37, 1019, 1828, 1861, 2479, 3289, 3898
HpyAV CCTTC 9 cut(s) 169, 426, 481, 853, 1024, 1035, 1899, 3412, 3943
HpyCH4IV ACGT 5 cut(s) 2295, 3186, 3724, 3951, 4160
HpySE526I ACGT 5 cut(s) 2295, 3186, 3724, 3951, 4160
Hsp92I GRCGYC 1 cut(s) 3202
HspAI GCGC 3 cut(s) 1417, 1419, 1680
KpnI GGTACC 1 cut(s) 3874
LguI GCTCTTC 1 cut(s) 1787
LmnI GCTCC 7 cut(s) 773, 1330, 1824, 2264, 2571, 3593, 4074
LweI GCATC 7 cut(s) 104, 749, 777, 878, 1629, 3025, 3132
MabI ACCWGGT 1 cut(s) 2926
MaeII ACGT 5 cut(s) 2295, 3186, 3724, 3951, 4160
MfeI CAATTG 6 cut(s) 102, 351, 2133, 2970, 3624, 3774
MflI RGATCY 7 cut(s) 616, 835, 1827, 2896, 3358, 3610, 4108
MhlI GDGCHC 6 cut(s) 412, 778, 1731, 2568, 3107, 3401
MlsI TGGCCA 1 cut(s) 2712
MluNI TGGCCA 1 cut(s) 2712
MlyI GAGTC 4 cut(s) 1005, 1262, 2392, 4136
MmeI TCCRAC 8 cut(s) 313, 712, 751, 1000, 1612, 1882, 2874, 3270
Mox20I TGGCCA 1 cut(s) 2712
Mph1103I ATGCAT 3 cut(s) 663, 3470, 3760
MroXI GAANNNNTTC 3 cut(s) 55, 3739, 3995
MscI TGGCCA 1 cut(s) 2712
Msp20I TGGCCA 1 cut(s) 2712
MspA1I CMGCKG 2 cut(s) 15, 386
MspCI CTTAAG 1 cut(s) 2902
MspI CCGG 5 cut(s) 319, 600, 2181, 3087, 4002
MspR9I CCNGG 6 cut(s) 2153, 2181, 2598, 2928, 3411, 4003
MunI CAATTG 6 cut(s) 102, 351, 2133, 2970, 3624, 3774
Mva1269I GAATGC 2 cut(s) 1133, 1394
MvaI CCWGG 4 cut(s) 2153, 2598, 2928, 3411
MvnI CGCG 2 cut(s) 1419, 1647
NciI CCSGG 2 cut(s) 2181, 4003
NcoI CCATGG 1 cut(s) 1793
NdeI CATATG 1 cut(s) 1801
NheI GCTAGC 1 cut(s) 1343
NlaIV GGNNCC 9 cut(s) 558, 1225, 1820, 2898, 2932, 3581, 3589, 3631, 3872
NmeAIII GCCGAG 1 cut(s) 3564
NmuCI GTSAC 7 cut(s) 17, 35, 637, 997, 2166, 3295, 3457
NsiI ATGCAT 3 cut(s) 663, 3470, 3760
NspI RCATGY 8 cut(s) 497, 661, 1238, 2174, 2284, 2521, 2786, 4062
NspV TTCGAA 2 cut(s) 1028, 3416
PaeI GCATGC 1 cut(s) 661
PagI TCATGA 2 cut(s) 289, 1938
PauI GCGCGC 1 cut(s) 1417
PciI ACATGT 4 cut(s) 493, 1234, 2170, 2782
PciSI GCTCTTC 1 cut(s) 1787
PcsI WCGNNNNNNNCGW 1 cut(s) 2227
PctI GAATGC 2 cut(s) 1133, 1394
PdmI GAANNNNTTC 3 cut(s) 55, 3739, 3995
PflMI CCANNNNNTGG 2 cut(s) 1901, 3026
PleI GAGTC 4 cut(s) 1004, 1261, 2392, 4135
PpsI GAGTC 4 cut(s) 1004, 1261, 2392, 4135
Ppu21I YACGTR 1 cut(s) 3187
PpuMI RGGWCCY 4 cut(s) 557, 1223, 3421, 3580
PscI ACATGT 4 cut(s) 493, 1234, 2170, 2782
PshBI ATTAAT 1 cut(s) 1659
PsiI TTATAA 2 cut(s) 1764, 3348
Psp124BI GAGCTC 2 cut(s) 778, 1731
Psp1406I AACGTT 1 cut(s) 2295
Psp5II RGGWCCY 4 cut(s) 557, 1223, 3421, 3580
Psp6I CCWGG 4 cut(s) 2151, 2596, 2926, 3409
PspGI CCWGG 4 cut(s) 2151, 2596, 2926, 3409
PspN4I GGNNCC 9 cut(s) 558, 1225, 1820, 2898, 2932, 3581, 3589, 3631, 3872
PspPI GGNCC 7 cut(s) 557, 1022, 1223, 2881, 3191, 3421, 3580
PspPPI RGGWCCY 4 cut(s) 557, 1223, 3421, 3580
PstI CTGCAG 4 cut(s) 147, 225, 1152, 2836
PstNI CAGNNNCTG 4 cut(s) 151, 839, 1160, 4211
PsuI RGATCY 7 cut(s) 616, 835, 1827, 2896, 3358, 3610, 4108
PteI GCGCGC 1 cut(s) 1417
PvuII CAGCTG 2 cut(s) 15, 386
SacI GAGCTC 2 cut(s) 778, 1731
SalI GTCGAC 1 cut(s) 215
SapI GCTCTTC 1 cut(s) 1787
Sau96I GGNCC 7 cut(s) 557, 1022, 1223, 2881, 3191, 3421, 3580
ScaI AGTACT 2 cut(s) 2434, 4224
SchI GAGTC 4 cut(s) 1005, 1262, 2392, 4136
ScrFI CCNGG 6 cut(s) 2153, 2181, 2598, 2928, 3411, 4003
SduI GDGCHC 6 cut(s) 412, 778, 1731, 2568, 3107, 3401
SexAI ACCWGGT 1 cut(s) 2926
SfaNI GCATC 7 cut(s) 104, 749, 777, 878, 1629, 3025, 3132
SfcI CTRYAG 6 cut(s) 143, 221, 1148, 1740, 2832, 4112
SfuI TTCGAA 2 cut(s) 1028, 3416
SinI GGWCC 5 cut(s) 557, 1022, 1223, 3421, 3580
SnaBI TACGTA 1 cut(s) 3187
SpeI ACTAGT 3 cut(s) 2026, 2914, 2983
SphI GCATGC 1 cut(s) 661
SsiI CCGC 5 cut(s) 54, 1473, 1645, 2049, 3306
SspI AATATT 2 cut(s) 1599, 3443
SstI GAGCTC 2 cut(s) 778, 1731
StyD4I CCNGG 6 cut(s) 2151, 2179, 2596, 2926, 3409, 4001
StyI CCWWGG 7 cut(s) 741, 763, 945, 1123, 1695, 1793, 2539
TaiI ACGT 5 cut(s) 2298, 3189, 3727, 3954, 4163
TatI WGTACW 5 cut(s) 2432, 2656, 2808, 3900, 4222
TauI GCSGC 2 cut(s) 1475, 2052
TscAI CASTG 3 cut(s) 523, 2517, 3526
TseFI GTSAC 7 cut(s) 17, 35, 637, 997, 2166, 3295, 3457
Tsp45I GTSAC 7 cut(s) 17, 35, 637, 997, 2166, 3295, 3457
TspGWI ACGGA 1 cut(s) 3611
TspRI CASTG 3 cut(s) 523, 2517, 3526
Van91I CCANNNNNTGG 2 cut(s) 1901, 3026
Vha464I CTTAAG 1 cut(s) 2902
VneI GTGCAC 1 cut(s) 3103
VpaK11BI GGWCC 5 cut(s) 557, 1022, 1223, 3421, 3580
VspI ATTAAT 1 cut(s) 1659
XagI CCTNNNNNAGG 1 cut(s) 3408
XceI RCATGY 8 cut(s) 497, 661, 1238, 2174, 2284, 2521, 2786, 4062
XcmI CCANNNNNNNNNTGG 2 cut(s) 586, 3007
XmiI GTMKAC 1 cut(s) 216
XmnI GAANNNNTTC 3 cut(s) 55, 3739, 3995
ZrmI AGTACT 2 cut(s) 2434, 4224
Zsp2I ATGCAT 3 cut(s) 663, 3470, 3760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.