RchiOBHm_Chr6g0286401
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
49797315 .. 49809588
12274 bp
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UTR
Exon/CDS
Intron
PRQ25688

Sequence Viewer

Length: 4281 bp
ATGGAGATCATCAGCTGTGACCTTGAAAAAGCCGGTCACAGTTTCAACAGAAGGGGTTCGTTTTGGACTGACGATGGCAGGGCGGTTTTCTCAGCATCTTCAGTTGGAGAGGACGACGAGGAAGCTCTCAAATGGGCAGCTTTGCAGAGACTTCCTACATTCACTCGCTTGAAAAAAGGTCTGCTCACTACTCCTCAAGGCCATGCCAACGAAGTCGATGTGCATCACCTTGAACTGCAAGAAAGGAAAGACTTGATTGAGAGGCTAGTGGGAGTTGCTGAGGAGGATCATGAGAAATTTTTGTTGAGGCTTAAGAGCCGAATCGATAGAGTTGGAATTAGTGTTCCTACAATTGAAGTTAGGTTCGAGCATTTGAAAATTGCAGCTGAAACTCATGTTGGAGGCAGGGCTCTTCCTTCTGTCTTCAATTATTGTGTTAATGTAGTGGAGGGTTTCTTGAATTGCCTGCACGTTCTTCCTGAAAAGAAGGAACATTTGTCTATACTGAAAGATGTCAGTGGGATCATCAAGCCTTGCAGGATGACATTGCTTTTGGGTCCTCCAAGTTCGGGGAAGACCACGCTCTTGCTGGCTTTGGCCGGAGAGCTTGATAAGGATCTCAAGGTTTCAGGAAGTGTGACTTACAATGGTCATGGCATGCACGAGTTTGTGCCTCAGAGAAGTGCTGCGTATATCAGTCAACATGATGTTCATATTGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCTGCAAGATGCCAAGGGGTCGGACCTCGTTATGAGATGCTAGCAGAGCTAAGTAGAAGAGAGAAAGATGCAAGTATTAAGCCAGATCCAGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGTAAAAGAGCAGCATTTGTGACAAATTATATTCTGAAGGTTTTGGGATTGGAGGGCTGTGCAAATACCTTGGTAGGGGATCAATTGATAAGGGGTATCTCTGGAGGACAAAAGAAGCGAGTCACAACTGGTGAGATGTTAGTTGGTCCTGCTAAGGCACTATTCATGGACGAAATATCGACTGGTTTGGATAGTTCAACAACTTATCAAATAGTGAATTCCATCAAGCAATATGTTCATATTCTCCAAGGGACTGCATTCATCTCACTACTGCAGCCAGCACCCGAGACTTATGATCTATTTGATGACATTATTCTCCTTTCTGATGGTCAAATTGTGTATCAAGGTCCCCGTGAACATGTTCTCGATTTTTTTGAGTCTATGGGCTTCAGATGTCCAGAGAGAAAAGGCGTGGCCGATTTCCTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAGTATTGGTTTAGCAGAGATGAACCTTACAGGTTCATCACAGTCGAAGAATTTTCCGTGGCATTCCAATCTTTCCACGTAGGGTGCGCAATTACACATGAACTTGCTACTCCATTTGACAAGACCAAGAGCCACTCAGCTGCATTAACGACAAAAAAATATGGTGTTAAAAGAGCAGAACTGCTGAAAGCTTGTTTCTCAAGGGAGTTCTTGCTCATGAAGAGGAATTCATTTGTTTACCTTTTCAAGCTTATCCAACTCTCAATATTGTCTCTGATTACAATGACACTGTTCCTACGAACTGAGATGCACCGCGATTCAGTAATTAATGGAGGAATTTATGCTGGCGCATTATTCTTCTCCTTGGTTGCTGTTATGTTCAATGGAATGGCAGAGCTTTCGATGACTATAGCCAAGCTTCCAGTGTTTTATAAGCACAGAAAGCTGCTCTTCTTTCCACCGTGGGCATATGCACTTCCGGCATGGCTCCTCAAGATCCCTCTCACCTGTGTTGAAGTTGGTGTTTGGGTATTTATCACCTATTATGTCATTGGCTTTGATCCAAATGTTGGAAGATTGTTTAAGCAATACCTTCTCCTCCTACTCATGAATCAAATGGCTTCTGGATTATTCCGATTCATTGCTGGAGTAGGTAGAAGCTTGACTGTTGCTAATACATTTGGCTCATTTGCACTAGTCATGCTTTTCGCTTTGGGGGGCTTTGTCCTGTCAAGAGAAAGTATAAAGAAATGGTGGATATGGGGCTACTGGATATCACCTTTGATGTATGGGCAGAATGCAATTGTAGTTAATGAATTCCTTGGCAAGACTTGGTCACATGTTCTTCCAAACTCAAACGAATCATTAGGAGTTGAAATTCTGAAATCTCGTGGATTTCGTACACATGTATATTGGTATTGGATTGGCACAGGAGCATTGGCTGGATACATGCTCTTATTCAACATTTGTTACACTCTGGCTCTCACTTATCTAAACCCTTTGGACAAGCCACAGGGTGTTAAATCAGAAGAATCTCAAGGCAATAAAGATGATGACAAAAGCTTGACTCCTCAAATCAGCAAAGAGAAAGGGGATGGAAGTACTACGCATAACACGAAAAGAGGAATGGTTCTTCCATTTGAACCATATTCCATCACCTTTGATGAAATCTCATACTCAGTGGACATGCCACAGGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTCCTCAGGCGCGTGAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCTCTTATGGGAGTGAGTGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGAAAAACTGGGGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAATCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATCGATTCCGAAACAAGGAAGATGTTTGTCGAGGAAGTGATGGCACTTGTGGAGTTGGATCCGTTAAGGCAAGCACTTGTAGGGTTGCCTGGTGCAAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACTTCTGGCCTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTTAGGAATACTGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATCTTTGAATCTTTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTTGGGCCATTGGGGCGTCATTCTTGCCATTTAATCAAGTACTTTGAGGGAATTGATAATGTCAGTAAGATTAAGGATGGTTATAATCCGGCAACTTGGATGTTGGAAGTCACCAGTTCTGCAAAAGAAATAGCTTCTGGTGTTGATTTTGCTGATATTTATAAAAATTCAGAGCTATACAGGAGAAACAAAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGATTCCAAGGACCTGTATTTCCCTACTCAATATTCTCAGCCATTTTTAACACAATGCATGGCTTGCTTATGGAAACAACATTGGTCATATTGGCGCAATCCAGCATATACTGCCATAAAGTTGATATACACAACCATCATAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAACGAAAAAACAACAGGATCTGTTCAATGCAATTGGTTCTATGTATGCTGCTGTTCTGTTTCTTGGTATTAAGAATTCAACAACAGTTCAGCCAGTAGTGTCTGTCGAACGAACAGTCTTTTATAGAGAACGAGCTGCTGGAATGTATTCTCCATTGGCTTATGCATTTGCACAGGTTGCAATTGAGCTCCCATATATTTTTGCCCAAACAATTCTCTATGGTGTCATAGTCTATGCAATGATCGGTTTTGAGTGGACTGTGACTAAATTCTTATGGTACCTATTTTTCATGTATTTCACATTTCTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCTTTACACCGAACCAGCACGTTGCTGCTATAAGCTCTAGTGCATTTTATGCAGTATGGAATGTCTTCTCCGGGTTCTTAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGCATGTCCAATGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATCTACAGAACGAGCTTGAGACGGGCGAAACTGTGGAACAATTTATGAGGACTTACTTTGGCTTCAAACATGAATTTCTAGGAGTGGTTGCAGCAGTAGTTGCTGGATTTGCAGTACTCTTTGCATTTGTCTTTGCCTTTTCAATTAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1426

Amino Acids

160.84

Weight (kDa)

7.57

Isoelectric Point (pI)

36.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 169 - 350 4.3e-15 ABC transporter
ABC2_membrane_7 PF19055 384 - 437 6.4e-06 ABC-2 type transporter
ABC2_membrane PF01061 505 - 717 1.4e-50 ABC-2 type transporter
PDR_assoc PF08370 722 - 783 7.6e-28 Plant PDR ABC transporter associated
ABC_tran PF00005 857 - 1009 2.9e-21 ABC transporter
ABC2_membrane PF01061 1154 - 1368 1.6e-58 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1764, 3270, 3348
Acc16I TGCGCA 1 cut(s) 1420
Acc36I ACCTGC 1 cut(s) 2839
Acc65I GGTACC 1 cut(s) 3870
AccB1I GGYRCC 2 cut(s) 2712, 3870
AccB7I CCANNNNNTGG 2 cut(s) 1901, 3026
AccII CGCG 2 cut(s) 1647, 2577
AciI CCGC 2 cut(s) 83, 1645
AcoI YGGCCR 2 cut(s) 597, 1290
AcuI CTGAAG 4 cut(s) 84, 932, 1249, 3182
AcyI GRCGYC 1 cut(s) 3202
AdeI CACNNNGTG 1 cut(s) 2348
AfaI GTAC 9 cut(s) 2233, 2434, 2658, 2810, 3227, 3872, 3902, 4049, 4224
AfiI CCNNNNNNNGG 5 cut(s) 569, 951, 1901, 2853, 3026
AflII CTTAAG 1 cut(s) 311
AflIII ACRYGT 4 cut(s) 1234, 2170, 2236, 2782
AhlI ACTAGT 2 cut(s) 2026, 2983
AjnI CCWGG 2 cut(s) 2596, 2926
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
AloI GAACNNNNNNTCC 4 cut(s) 327, 359, 4012, 4044
Alw21I GWGCWC 4 cut(s) 2568, 3107, 3401, 3783
Alw26I GTCTC 5 cut(s) 142, 1157, 1608, 2945, 4121
Alw44I GTGCAC 1 cut(s) 3103
AlwNI CAGNNNCTG 1 cut(s) 3613
Ama87I CYCGRG 1 cut(s) 1160
AoxI GGCC 7 cut(s) 199, 597, 1290, 2594, 3028, 3191, 3930
ApaLI GTGCAC 1 cut(s) 3103
ArsI GACNNNNNNTTYG 4 cut(s) 535, 567, 3693, 3725
AseI ATTAAT 1 cut(s) 1659
Asp700I GAANNNNTTC 4 cut(s) 55, 1236, 3739, 3995
Asp718I GGTACC 1 cut(s) 3870
AspLEI GCGC 4 cut(s) 1421, 1682, 2577, 3507
AspS9I GGNCC 7 cut(s) 557, 773, 1022, 1223, 3191, 3421, 3580
AsuC2I CCSGG 1 cut(s) 4003
AsuHPI GGTGA 8 cut(s) 218, 1019, 1828, 1861, 2100, 2479, 3289, 3898
AsuNHI GCTAGC 1 cut(s) 790
AvaI CYCGRG 1 cut(s) 1160
AvaII GGWCC 6 cut(s) 557, 773, 1022, 1223, 3421, 3580
AxyI CCTNAGG 2 cut(s) 2550, 2570
BaeGI GKGCMC 2 cut(s) 2715, 3107
BamHI GGATCC 1 cut(s) 2896
BanI GGYRCC 2 cut(s) 2712, 3870
BanII GRGCYC 2 cut(s) 412, 3783
BarI GAAGNNNNNNTAC 2 cut(s) 3893, 3925
BauI CACGAG 2 cut(s) 662, 2220
BbsI GAAGAC 3 cut(s) 415, 581, 3988
Bbv12I GWGCWC 4 cut(s) 2568, 3107, 3401, 3783
BbvCI CCTCAGC 1 cut(s) 279
BcgI CGANNNNNNTGC 2 cut(s) 1713, 1747
BciT130I CCWGG 2 cut(s) 2598, 2928
BciVI GTATCC 2 cut(s) 2270, 2744
BcnI CCSGG 1 cut(s) 4003
BcoDI GTCTC 5 cut(s) 142, 1157, 1608, 2945, 4121
BcuI ACTAGT 2 cut(s) 2026, 2983
BfaI CTAG 9 cut(s) 266, 791, 2027, 2660, 2984, 3032, 3969, 4023, 4187
BfmI CTRYAG 4 cut(s) 1148, 1740, 2832, 4112
BfrI CTTAAG 1 cut(s) 311
BfuAI ACCTGC 1 cut(s) 2839
BfuI GTATCC 2 cut(s) 2270, 2744
BglI GCCNNNNNGGC 1 cut(s) 3199
BglII AGATCT 1 cut(s) 4108
BmcAI AGTACT 3 cut(s) 2434, 3227, 4224
Bme1390I CCNGG 3 cut(s) 2598, 2928, 4003
Bme18I GGWCC 6 cut(s) 557, 773, 1022, 1223, 3421, 3580
BmeT110I CYCGRG 1 cut(s) 1160
BmgT120I GGNCC 7 cut(s) 557, 773, 1022, 1223, 3191, 3421, 3580
BmiI GGNNCC 8 cut(s) 558, 1225, 1820, 2714, 2898, 3581, 3589, 3872
BmrFI CCNGG 3 cut(s) 2598, 2928, 4003
BmrI ACTGGG 1 cut(s) 2685
BmsI GCATC 8 cut(s) 104, 232, 749, 777, 808, 878, 1629, 3025
BmtI GCTAGC 1 cut(s) 794
BmuI ACTGGG 1 cut(s) 2685
BpiI GAAGAC 3 cut(s) 415, 581, 3988
BplI GAGNNNNNCTC 2 cut(s) 3388, 3420
BpmI CTGGAG 3 cut(s) 999, 1998, 3393
Bpu10I CCTNAGC 2 cut(s) 279, 1029
BpuEI CTTGAG 6 cut(s) 180, 605, 1516, 1808, 2352, 4145
BpuMI CCSGG 1 cut(s) 4003
Bsa29I ATCGAT 2 cut(s) 324, 2841
BsaAI YACGTR 1 cut(s) 1411
BsaBI GATNNNNATC 2 cut(s) 222, 615
BsaHI GRCGYC 1 cut(s) 3202
BsaI GGTCTC 1 cut(s) 2945
BsaWI WCCGGW 1 cut(s) 3086
BsaXI ACNNNNNCTCC 4 cut(s) 3391, 3421, 3572, 3602
Bsc4I CCNNNNNNNGG 5 cut(s) 569, 951, 1901, 2853, 3026
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 7 cut(s) 1009, 1063, 1754, 2105, 2680, 3300, 3686
Bse21I CCTNAGG 2 cut(s) 2550, 2570
Bse3DI GCAATG 4 cut(s) 545, 1971, 2970, 3837
Bse8I GATNNNNATC 2 cut(s) 222, 615
BseBI CCWGG 2 cut(s) 2598, 2928
BseCI ATCGAT 2 cut(s) 324, 2841
BseGI GGATG 7 cut(s) 546, 2431, 2659, 2769, 3019, 3268, 3291
BseJI GATNNNNATC 2 cut(s) 222, 615
BseLI CCNNNNNNNGG 5 cut(s) 569, 951, 1901, 2853, 3026
BseMI GCAATG 4 cut(s) 545, 1971, 2970, 3837
BseNI ACTGG 7 cut(s) 1009, 1063, 1754, 2105, 2680, 3300, 3686
BseRI GAGGAG 7 cut(s) 183, 296, 1811, 1919, 2391, 2558, 3396
BseSI GKGCMC 2 cut(s) 2715, 3107
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 2 cut(s) 1647, 2577
BshFI GGCC 7 cut(s) 201, 599, 1292, 2596, 3030, 3193, 3932
BshNI GGYRCC 2 cut(s) 2712, 3870
BshVI ATCGAT 2 cut(s) 324, 2841
BsiHKAI GWGCWC 4 cut(s) 2568, 3107, 3401, 3783
BsiHKCI CYCGRG 1 cut(s) 1160
BsiSI CCGG 6 cut(s) 33, 600, 1811, 3087, 3275, 4002
BslFI GGGAC 4 cut(s) 1141, 1209, 3580, 3593
BslI CCNNNNNNNGG 5 cut(s) 569, 951, 1901, 2853, 3026
BsmAI GTCTC 5 cut(s) 142, 1157, 1608, 2945, 4121
BsmBI CGTCTC 1 cut(s) 4121
BsmFI GGGAC 4 cut(s) 1141, 1209, 3580, 3593
BsmI GAATGC 3 cut(s) 1133, 1394, 2134
BsnI GGCC 7 cut(s) 201, 599, 1292, 2596, 3030, 3193, 3932
Bso31I GGTCTC 1 cut(s) 2945
BsoBI CYCGRG 1 cut(s) 1160
Bsp1286I GDGCHC 6 cut(s) 412, 2568, 2715, 3107, 3401, 3783
BspACI CCGC 2 cut(s) 83, 1645
BspANI GGCC 7 cut(s) 201, 599, 1292, 2596, 3030, 3193, 3932
BspDI ATCGAT 2 cut(s) 324, 2841
BspFNI CGCG 2 cut(s) 1647, 2577
BspHI TCATGA 3 cut(s) 289, 1548, 1938
BspLI GGNNCC 8 cut(s) 558, 1225, 1820, 2714, 2898, 3581, 3589, 3872
BspMAI CTGCAG 2 cut(s) 1152, 2836
BspMI ACCTGC 1 cut(s) 2839
BspOI GCTAGC 1 cut(s) 794
BspQI GCTCTTC 2 cut(s) 417, 1787
BspT107I GGYRCC 2 cut(s) 2712, 3870
BspTI CTTAAG 1 cut(s) 311
BspTNI GGTCTC 1 cut(s) 2945
BsrDI GCAATG 4 cut(s) 545, 1971, 2970, 3837
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 7 cut(s) 1009, 1063, 1754, 2105, 2680, 3300, 3686
BssAI RCCGGY 1 cut(s) 32
BssNI GRCGYC 1 cut(s) 3202
BssSI CACGAG 2 cut(s) 662, 2220
BssT1I CCWWGG 9 cut(s) 741, 763, 945, 1123, 1695, 2152, 2539, 3417, 3583
Bst2BI CACGAG 2 cut(s) 662, 2220
Bst2UI CCWGG 2 cut(s) 2598, 2928
Bst6I CTCTTC 4 cut(s) 417, 802, 1547, 1787
BstACI GRCGYC 1 cut(s) 3202
BstAFI CTTAAG 1 cut(s) 311
BstAPI GCANNNNNTGC 6 cut(s) 3044, 3474, 3521, 3770, 3980, 4208
BstBAI YACGTR 1 cut(s) 1411
BstC8I GCNNGC 9 cut(s) 467, 591, 659, 792, 1155, 1678, 2635, 2910, 3475
BstDSI CCRYGG 2 cut(s) 1389, 1793
BstF5I GGATG 7 cut(s) 546, 2431, 2659, 2769, 3019, 3268, 3291
BstFNI CGCG 2 cut(s) 1647, 2577
BstHHI GCGC 4 cut(s) 1421, 1682, 2577, 3507
BstMAI GTCTC 5 cut(s) 142, 1157, 1608, 2945, 4121
BstNI CCWGG 2 cut(s) 2598, 2928
BstNSI RCATGY 8 cut(s) 661, 1238, 2174, 2240, 2284, 2521, 2786, 4062
BstSCI CCNGG 3 cut(s) 2596, 2926, 4001
BstSFI CTRYAG 4 cut(s) 1148, 1740, 2832, 4112
BstSLI GKGCMC 2 cut(s) 2715, 3107
BstUI CGCG 2 cut(s) 1647, 2577
BstV2I GAAGAC 3 cut(s) 415, 581, 3988
BstX2I RGATCY 6 cut(s) 616, 835, 1827, 2896, 3610, 4108
BstXI CCANNNNNNTGG 1 cut(s) 4071
BstYI RGATCY 6 cut(s) 616, 835, 1827, 2896, 3610, 4108
Bsu15I ATCGAT 2 cut(s) 324, 2841
Bsu36I CCTNAGG 2 cut(s) 2550, 2570
BsuI GTATCC 2 cut(s) 2270, 2744
BsuRI GGCC 7 cut(s) 201, 599, 1292, 2596, 3030, 3193, 3932
BsuTUI ATCGAT 2 cut(s) 324, 2841
BtgI CCRYGG 2 cut(s) 1389, 1793
BtsCI GGATG 7 cut(s) 546, 2431, 2659, 2769, 3019, 3268, 3291
BtsIMutI CAGTG 4 cut(s) 523, 1619, 1761, 2517
BveI ACCTGC 1 cut(s) 2839
Cac8I GCNNGC 9 cut(s) 467, 591, 659, 792, 1155, 1678, 2635, 2910, 3475
CaiI CAGNNNCTG 1 cut(s) 3613
CciI TCATGA 3 cut(s) 289, 1548, 1938
CfoI GCGC 4 cut(s) 1421, 1682, 2577, 3507
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 7 cut(s) 557, 773, 1022, 1223, 3191, 3421, 3580
ClaI ATCGAT 2 cut(s) 324, 2841
CseI GACGC 1 cut(s) 3191
Csp6I GTAC 9 cut(s) 2232, 2433, 2657, 2809, 3226, 3871, 3901, 4048, 4223
CviQI GTAC 9 cut(s) 2232, 2433, 2657, 2809, 3226, 3871, 3901, 4048, 4223
DraIII CACNNNGTG 1 cut(s) 2348
EaeI YGGCCR 2 cut(s) 597, 1290
Eam1104I CTCTTC 4 cut(s) 417, 802, 1547, 1787
EarI CTCTTC 4 cut(s) 417, 802, 1547, 1787
Ecl136II GAGCTC 1 cut(s) 3781
Eco130I CCWWGG 9 cut(s) 741, 763, 945, 1123, 1695, 2152, 2539, 3417, 3583
Eco24I GRGCYC 2 cut(s) 412, 3783
Eco31I GGTCTC 1 cut(s) 2945
Eco32I GATATC 3 cut(s) 850, 2106, 3130
Eco47I GGWCC 6 cut(s) 557, 773, 1022, 1223, 3421, 3580
Eco53kI GAGCTC 1 cut(s) 3781
Eco57I CTGAAG 4 cut(s) 84, 932, 1249, 3182
Eco81I CCTNAGG 2 cut(s) 2550, 2570
Eco88I CYCGRG 1 cut(s) 1160
EcoICRI GAGCTC 1 cut(s) 3781
EcoO109I RGGNCCY 4 cut(s) 557, 1223, 3421, 3580
EcoRI GAATTC 4 cut(s) 1093, 1558, 2147, 3667
EcoRII CCWGG 2 cut(s) 2596, 2926
EcoRV GATATC 3 cut(s) 850, 2106, 3130
EcoT14I CCWWGG 9 cut(s) 741, 763, 945, 1123, 1695, 2152, 2539, 3417, 3583
EcoT22I ATGCAT 2 cut(s) 3470, 3760
EcoT38I GRGCYC 2 cut(s) 412, 3783
ErhI CCWWGG 9 cut(s) 741, 763, 945, 1123, 1695, 2152, 2539, 3417, 3583
Esp3I CGTCTC 1 cut(s) 4121
FalI AAGNNNNNCTT 4 cut(s) 625, 657, 1766, 1798
FaqI GGGAC 4 cut(s) 1141, 1209, 3580, 3593
FauNDI CATATG 1 cut(s) 1801
FokI GGATG 7 cut(s) 553, 2438, 2666, 2756, 3026, 3275, 3298
FriOI GRGCYC 2 cut(s) 412, 3783
FspBI CTAG 9 cut(s) 266, 791, 2027, 2660, 2984, 3032, 3969, 4023, 4187
FspI TGCGCA 1 cut(s) 1420
GlaI GCGC 4 cut(s) 1420, 1681, 2576, 3506
GsuI CTGGAG 3 cut(s) 999, 1998, 3393
HaeIII GGCC 7 cut(s) 201, 599, 1292, 2596, 3030, 3193, 3932
HapII CCGG 6 cut(s) 33, 600, 1811, 3087, 3275, 4002
HgaI GACGC 1 cut(s) 3191
HhaI GCGC 4 cut(s) 1421, 1682, 2577, 3507
Hin1I GRCGYC 1 cut(s) 3202
Hin6I GCGC 4 cut(s) 1419, 1680, 2575, 3505
HinP1I GCGC 4 cut(s) 1419, 1680, 2575, 3505
HincII GTYRAC 1 cut(s) 701
HindII GTYRAC 1 cut(s) 701
HindIII AAGCTT 5 cut(s) 1521, 1580, 1748, 1990, 2392
HpaII CCGG 6 cut(s) 33, 600, 1811, 3087, 3275, 4002
HphI GGTGA 8 cut(s) 218, 1019, 1828, 1861, 2100, 2479, 3289, 3898
Hpy166II GTNNAC 9 cut(s) 701, 1232, 1570, 2234, 2515, 2828, 3082, 3105, 3849
Hpy8I GTNNAC 9 cut(s) 701, 1232, 1570, 2234, 2515, 2828, 3082, 3105, 3849
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 7 cut(s) 45, 426, 481, 853, 907, 1934, 3919
HpyCH4IV ACGT 4 cut(s) 471, 1410, 3186, 3951
HpySE526I ACGT 4 cut(s) 471, 1410, 3186, 3951
Hsp92I GRCGYC 1 cut(s) 3202
HspAI GCGC 4 cut(s) 1419, 1680, 2575, 3505
KpnI GGTACC 1 cut(s) 3874
LguI GCTCTTC 2 cut(s) 417, 1787
LmnI GCTCC 7 cut(s) 1330, 1824, 2264, 2571, 3593, 3786, 4074
LweI GCATC 8 cut(s) 104, 232, 749, 777, 808, 878, 1629, 3025
MaeI CTAG 9 cut(s) 266, 791, 2027, 2660, 2984, 3032, 3969, 4023, 4187
MaeII ACGT 4 cut(s) 471, 1410, 3186, 3951
MfeI CAATTG 6 cut(s) 351, 959, 2133, 3051, 3624, 3774
MflI RGATCY 6 cut(s) 616, 835, 1827, 2896, 3610, 4108
MhlI GDGCHC 6 cut(s) 412, 2568, 2715, 3107, 3401, 3783
MlyI GAGTC 3 cut(s) 1005, 1262, 2392
MmeI TCCRAC 8 cut(s) 85, 313, 379, 751, 1612, 1882, 2874, 3270
Mph1103I ATGCAT 2 cut(s) 3470, 3760
MroXI GAANNNNTTC 4 cut(s) 55, 1236, 3739, 3995
MspA1I CMGCKG 3 cut(s) 15, 386, 1472
MspCI CTTAAG 1 cut(s) 311
MspI CCGG 6 cut(s) 33, 600, 1811, 3087, 3275, 4002
MspR9I CCNGG 3 cut(s) 2598, 2928, 4003
MunI CAATTG 6 cut(s) 351, 959, 2133, 3051, 3624, 3774
Mva1269I GAATGC 3 cut(s) 1133, 1394, 2134
MvaI CCWGG 2 cut(s) 2598, 2928
MvnI CGCG 2 cut(s) 1647, 2577
NciI CCSGG 1 cut(s) 4003
NdeI CATATG 1 cut(s) 1801
NheI GCTAGC 1 cut(s) 790
NlaIV GGNNCC 8 cut(s) 558, 1225, 1820, 2714, 2898, 3581, 3589, 3872
NmuCI GTSAC 9 cut(s) 17, 35, 637, 895, 997, 1309, 2166, 3295, 3853
NsbI TGCGCA 1 cut(s) 1420
NsiI ATGCAT 2 cut(s) 3470, 3760
NspI RCATGY 8 cut(s) 661, 1238, 2174, 2240, 2284, 2521, 2786, 4062
PaeI GCATGC 1 cut(s) 661
PagI TCATGA 3 cut(s) 289, 1548, 1938
PciI ACATGT 4 cut(s) 1234, 2170, 2236, 2782
PciSI GCTCTTC 2 cut(s) 417, 1787
PcsI WCGNNNNNNNCGW 2 cut(s) 2227, 2444
PctI GAATGC 3 cut(s) 1133, 1394, 2134
PdmI GAANNNNTTC 4 cut(s) 55, 1236, 3739, 3995
PflFI GACNNNGTC 1 cut(s) 2164
PflMI CCANNNNNTGG 2 cut(s) 1901, 3026
PleI GAGTC 3 cut(s) 1004, 1261, 2392
PpsI GAGTC 3 cut(s) 1004, 1261, 2392
Ppu21I YACGTR 1 cut(s) 1411
PpuMI RGGWCCY 4 cut(s) 557, 1223, 3421, 3580
PscI ACATGT 4 cut(s) 1234, 2170, 2236, 2782
PshBI ATTAAT 1 cut(s) 1659
PsiI TTATAA 3 cut(s) 1764, 3270, 3348
Psp124BI GAGCTC 1 cut(s) 3783
Psp5II RGGWCCY 4 cut(s) 557, 1223, 3421, 3580
Psp6I CCWGG 2 cut(s) 2596, 2926
PspGI CCWGG 2 cut(s) 2596, 2926
PspN4I GGNNCC 8 cut(s) 558, 1225, 1820, 2714, 2898, 3581, 3589, 3872
PspPI GGNCC 7 cut(s) 557, 773, 1022, 1223, 3191, 3421, 3580
PspPPI RGGWCCY 4 cut(s) 557, 1223, 3421, 3580
PstI CTGCAG 2 cut(s) 1152, 2836
PstNI CAGNNNCTG 1 cut(s) 3613
PsuI RGATCY 6 cut(s) 616, 835, 1827, 2896, 3610, 4108
PsyI GACNNNGTC 1 cut(s) 2164
PvuII CAGCTG 3 cut(s) 15, 386, 1472
RsaI GTAC 9 cut(s) 2233, 2434, 2658, 2810, 3227, 3872, 3902, 4049, 4224
RsaNI GTAC 9 cut(s) 2232, 2433, 2657, 2809, 3226, 3871, 3901, 4048, 4223
SacI GAGCTC 1 cut(s) 3783
SapI GCTCTTC 2 cut(s) 417, 1787
Sau96I GGNCC 7 cut(s) 557, 773, 1022, 1223, 3191, 3421, 3580
ScaI AGTACT 3 cut(s) 2434, 3227, 4224
SchI GAGTC 3 cut(s) 1005, 1262, 2392
ScrFI CCNGG 3 cut(s) 2598, 2928, 4003
SduI GDGCHC 6 cut(s) 412, 2568, 2715, 3107, 3401, 3783
SfaNI GCATC 8 cut(s) 104, 232, 749, 777, 808, 878, 1629, 3025
SfcI CTRYAG 4 cut(s) 1148, 1740, 2832, 4112
SinI GGWCC 6 cut(s) 557, 773, 1022, 1223, 3421, 3580
SmlI CTYRAG 7 cut(s) 195, 311, 620, 1531, 1823, 2367, 4124
SmoI CTYRAG 7 cut(s) 195, 311, 620, 1531, 1823, 2367, 4124
SpeI ACTAGT 2 cut(s) 2026, 2983
SphI GCATGC 1 cut(s) 661
SsiI CCGC 2 cut(s) 83, 1645
SspI AATATT 2 cut(s) 1599, 3443
SspMI CTAG 9 cut(s) 266, 791, 2027, 2660, 2984, 3032, 3969, 4023, 4187
SstI GAGCTC 1 cut(s) 3783
StyD4I CCNGG 3 cut(s) 2596, 2926, 4001
StyI CCWWGG 9 cut(s) 741, 763, 945, 1123, 1695, 2152, 2539, 3417, 3583
TaiI ACGT 4 cut(s) 474, 1413, 3189, 3954
TatI WGTACW 6 cut(s) 2432, 2656, 2808, 3225, 3900, 4222
TscAI CASTG 4 cut(s) 523, 1626, 1761, 2517
TseFI GTSAC 9 cut(s) 17, 35, 637, 895, 997, 1309, 2166, 3295, 3853
Tsp45I GTSAC 9 cut(s) 17, 35, 637, 895, 997, 1309, 2166, 3295, 3853
TspGWI ACGGA 2 cut(s) 1378, 2889
TspRI CASTG 4 cut(s) 523, 1626, 1761, 2517
Tth111I GACNNNGTC 1 cut(s) 2164
Van91I CCANNNNNTGG 2 cut(s) 1901, 3026
Vha464I CTTAAG 1 cut(s) 311
VneI GTGCAC 1 cut(s) 3103
VpaK11BI GGWCC 6 cut(s) 557, 773, 1022, 1223, 3421, 3580
VspI ATTAAT 1 cut(s) 1659
XceI RCATGY 8 cut(s) 661, 1238, 2174, 2240, 2284, 2521, 2786, 4062
XcmI CCANNNNNNNNNTGG 2 cut(s) 586, 3007
XmnI GAANNNNTTC 4 cut(s) 55, 1236, 3739, 3995
XspI CTAG 9 cut(s) 266, 791, 2027, 2660, 2984, 3032, 3969, 4023, 4187
ZrmI AGTACT 3 cut(s) 2434, 3227, 4224
Zsp2I ATGCAT 2 cut(s) 3470, 3760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.