RLG00000012576
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
20042109 .. 20048542
6434 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012576

Sequence Viewer

Length: 4008 bp
ATGGAGATCATCAGCTGTGACCTTGAAAAAGCCGGTCACAGTTTCAACAGAAGGGGTTCGTTTTGGACTGACGATGGCAGGGCTGTTTTCTCAGCATCTTCTGTTGGAGAGGACGACGAGGAAGCTCTCAAATGGGCAGCTTTGCAGAGACTTCCTACATTCACTCGTTTGAAAAAAGGTCTGCTCACTACTCCTCAAGGCCATGCCAACGAAGTCGATGTGCATCACCTTGAGCTGCAAGAAAAGAAAGACTTGATCGAGAGGCTAGTGGGAGTTGCTGAGGAGGATCATGAGAAATTTTTGATGAGGCTTAAGAGCCGAATCGATAGAGTTGGAATTAGTGTTCCTACGATTGAAGTTAGGTTCGAGCATTTGAAAATTGCAGCTGAAGCTCATGTTGGAGGCAGGGCTCTGCCTTCTGTCTTCAATTATTGTGTTAATGTAGTGGAGGGTTTCTTGAATTGCCTGCACATTCTTCCTGAAAAGAAGGAACATTTGTCTATACTGAAAGATGTCAGTGGGATCATCAAGCCTTGCAGGATGACATTGCTTTTGGGTCCTCCAAGTTCGGGGAAGACCACGCTCTTGCTGGCTTTGGCCGGAGAGCTTGATAAGGATCTCAAGGTTTCAGGAAGTGTGACTTACAATGGTCATGGCATGCACGAGTTTGTGCCTCAGAGAAGTGCTGCATATATCAGTCAACATGATGTTCATATTGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCTGCAAGATGCCAAGGGGTCGGACCTCGTTATGAGCTGCTAGTAGAGCTAAGTAGAAGAGAGAAAGATGCAAGTATTAAGCCAGATCCAGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGTGAAAGAGCAGCATTTGTGACAAATTATATTCTGAAGGTTTTGGGATTGGAGGGCTGTGCAAATACCTTGGTAGGGGATCAATTGATAAGGGGTATCTCTGGAGGACAAAAGAAGCGAGTCACAACTGGTGAGATGTTAGTTGGTCCTGCTAAGGCACTATTCATGGACGAAATATCGACTGGTTTGGATAGTTCAACAACTTATCAAATAGTGAATTCCATCAAGCAATACGTTCACATTCTCCAAGGGACTGCATTCATCTCACTACTGCAGCCAGCACCCGAGACTTATGATCTATTTGATGACATTATTCTCCTTTCTGATGGTCAAATTGTGTATCAAGGTCCCCGTGAACATGTTCTCGATTTTTTTGAGTCTATGGGCTTCAGATGTCCAGAGAGAAAGGGTGTGGCCGATTTCCTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAGTATTGGGCTAGCAGAGATGAACCTTACAGGTTCATCACAGTCGAAAAATTTTCCGAGGCATTCCAATCTTTCCACGTAGGGCGCGCAATTACACATGAACTTGCTACTCCATTTGACAAGACCACAAGCCACTCAGCTGCATTAACGACAAAAAAATATGGTGTTAAAAGAGCAGAACTGCTGAAAGCTTGTTTCTCAAGGGAGTTCTTGCTCATGAAGAGGAATTCATTTGTTTACCTTTTCAAGCTTATCCAACTCTCAATATTGTCTCTGATTACAATGACACTGTTCCTTCGAACTAAGATGCACCGCGATTCAGTAATTAATGGAGGAATTTATGCTGGCGCATTATTCTTCTCCTTGGTTGCTGTTATGTTCAATGGAATGGCAGAGCTTTCGATGACTATAGCCAAGCTTCCAGTGTTTTATAAGCACAGAAAGCTGCTCTTCTTTCCACCATGGGCATATGCACTTCCGGCATGGCTCCTCAAGATCCCTCTCACCTGTGTTGAAGTTGGTGTTTGGGTATTTATCACCTATTATGTCATTGGCTTTGATCCAAATGTTCTTCCAAACTCAAATGAATCATTAGGTGTTGAAATTCTGAAATCTCGTGGATTTCGTACACATGCATATTGGTATTGGATTGGCGCAGGAGCATTGGCTGGATACATGCTCTTATTCAACATTTGTTACACCCTGGCTCTCACTTATCTAAACCCTTTGGACAAGCCACAGGGTGTTAAATCAGAAGAATCTCAAGGCAATAAAGATGATGACAAAAGCTTGACTCCTCAAATCAGCAAAGAGAAAGGAGATGGAAGTACTACTCATAACACGAAAAGAGGAATGGTTCTTCCATTTGAACCATATTCCATCACCTTTGATGAAATCTCATACTCGGTGGACATGCCACAGGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTACTCAGGCGCGTCAGTGGTGCTTTCAGGCCAGGTATTCTCACAGCTTTGATGGGAGTTAGCGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGGAAAACCGGTGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAAAATGACATCCACTCTCCACATGTTACTGTTTATGAATCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATCGATTCCGAAAAAAGGAAGATGTTTGTCGAGGAAGTGATGGCACTTGTGGAGTTGGATCCGTTAAGGCAAGCACTTGTAGGGTTGCCTGGTGCAAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACTTCTGGCCTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTTAGGAATACTGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATCTTTGAATCTTTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTTGGGCCATTGGGGCGTCATTCTTGCCATTTAATCAAGTACTTTGAGGGAATTGATAATGTCAGTAAGATTAAGGACGGTTATAATCCGGCAACTTGGATGTTGGAAGTCACCAGTTCTGCGAAAGAAATAGCTTCTGGTGTTGATTTTGCTGATATTTATAAAAATTCAGAGCTATACAGGAGAAACAAAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGATTCTAAGGACCTGTATTTCCCTACTCAATACTCTCAGCCATTTTTAACACAATGCATGGCTTGCTTATGGAAACAACATTGGTCGTATTGGCGCAATCCAGCATATACTGCCATAAAGTTGATATACACAACCATCATAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAACGAAAAAACAACAGGATCTGTTCAATGCAATTGGTTCTATGTATGCTGCTGTTCTGTTTCTTGGTATTAAGAATTCAGCAACAGTTCAGCCAGTAGTGTCTGTCGAACGAACAGTCTTTTATAGAGAACGAGCTGCTGGAATGTATTCTCCATTGGCTTATGCATTTGCACAGGTTGCAATTGAGCTCCCATATATTTTTGCCCAAACAATTCTCTATGGTGTCATAGTCTATGCAATGATCGGTTTTGAGTGGACTGTGACTAAATTCTTATGGTACCTATTTTTCATGTATTTCACATTTCTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCTTTACACCGAACCAGCACGTTGCTGCTATAAGCGCTAGTGCATTTTATGCAGTATGGAATGTCTTCTCCGGGTTCATAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGCATGTCCAATCGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATCTACAGAACGAGCTTGAGACGGGCGAAACTGTGGAACAATTTATGAGGACTTACTTTGGCTTCAAACATGAATTTCTAGGAGTGGTTGCAGCAGTAGTTGCTGGATTTGCAGTACTCTTTGCATTTGTCTTTGCCTTTTCAATTAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1336

Amino Acids

150.38

Weight (kDa)

6.9

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 169 - 350 3.9e-15 ABC transporter
ABC2_membrane_7 PF19055 384 - 436 9.3e-06 ABC-2 type transporter
ABC2_membrane PF01061 505 - 634 1.2e-24 ABC-2 type transporter
PDR_assoc PF08370 636 - 692 1.5e-27 Plant PDR ABC transporter associated
ABC_tran PF00005 766 - 918 2.5e-21 ABC transporter
ABC2_membrane PF01061 1063 - 1277 2.1e-58 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1764, 2997, 3075
Acc36I ACCTGC 1 cut(s) 2566
Acc65I GGTACC 1 cut(s) 3597
AccB1I GGYRCC 2 cut(s) 2439, 3597
AccB7I CCANNNNNTGG 1 cut(s) 2753
AccII CGCG 3 cut(s) 1419, 1647, 2304
AciI CCGC 2 cut(s) 1645, 2355
AcoI YGGCCR 2 cut(s) 597, 1290
AcuI CTGAAG 4 cut(s) 408, 932, 1249, 2909
AcyI GRCGYC 1 cut(s) 2929
AdeI CACNNNGTG 1 cut(s) 2075
AfaI GTAC 9 cut(s) 1960, 2161, 2385, 2537, 2954, 3599, 3629, 3776, 3951
AfeI AGCGCT 1 cut(s) 3694
AfiI CCNNNNNNNGG 4 cut(s) 569, 951, 2580, 2753
AflII CTTAAG 1 cut(s) 311
AflIII ACRYGT 2 cut(s) 1234, 2509
AgeI ACCGGT 1 cut(s) 2402
AhlI ACTAGT 1 cut(s) 2710
AjnI CCWGG 3 cut(s) 2034, 2323, 2653
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
AloI GAACNNNNNNTCC 4 cut(s) 327, 359, 3739, 3771
Alw21I GWGCWC 3 cut(s) 2834, 3128, 3510
Alw26I GTCTC 5 cut(s) 142, 1157, 1608, 2672, 3848
Alw44I GTGCAC 1 cut(s) 2830
AlwNI CAGNNNCTG 1 cut(s) 3340
Ama87I CYCGRG 1 cut(s) 1160
Aor51HI AGCGCT 1 cut(s) 3694
AoxI GGCC 7 cut(s) 199, 597, 1290, 2321, 2755, 2918, 3657
ApaLI GTGCAC 1 cut(s) 2830
ArsI GACNNNNNNTTYG 4 cut(s) 535, 567, 3420, 3452
AseI ATTAAT 1 cut(s) 1659
AsiGI ACCGGT 1 cut(s) 2402
Asp700I GAANNNNTTC 4 cut(s) 55, 1236, 3466, 3722
Asp718I GGTACC 1 cut(s) 3597
AspLEI GCGC 7 cut(s) 1419, 1421, 1682, 1988, 2304, 3234, 3695
AspS9I GGNCC 7 cut(s) 557, 773, 1022, 1223, 2918, 3148, 3307
AsuC2I CCSGG 1 cut(s) 3730
AsuHPI GGTGA 7 cut(s) 218, 1019, 1828, 1861, 2206, 3016, 3625
AsuII TTCGAA 1 cut(s) 1630
AsuNHI GCTAGC 1 cut(s) 1343
AvaI CYCGRG 1 cut(s) 1160
AvaII GGWCC 6 cut(s) 557, 773, 1022, 1223, 3148, 3307
AxyI CCTNAGG 1 cut(s) 2277
BaeGI GKGCMC 2 cut(s) 2442, 2834
BamHI GGATCC 1 cut(s) 2623
BanI GGYRCC 2 cut(s) 2439, 3597
BanII GRGCYC 2 cut(s) 412, 3510
BarI GAAGNNNNNNTAC 2 cut(s) 3620, 3652
BauI CACGAG 2 cut(s) 662, 1947
BbsI GAAGAC 3 cut(s) 415, 581, 3715
Bbv12I GWGCWC 3 cut(s) 2834, 3128, 3510
BbvCI CCTCAGC 1 cut(s) 279
BcgI CGANNNNNNTGC 2 cut(s) 1713, 1747
BciT130I CCWGG 3 cut(s) 2036, 2325, 2655
BciVI GTATCC 2 cut(s) 1997, 2471
BcnI CCSGG 1 cut(s) 3730
BcoDI GTCTC 5 cut(s) 142, 1157, 1608, 2672, 3848
BcuI ACTAGT 1 cut(s) 2710
BfaI CTAG 9 cut(s) 266, 791, 1344, 2387, 2711, 2759, 3696, 3750, 3914
BfmI CTRYAG 4 cut(s) 1148, 1740, 2559, 3839
BfoI RGCGCY 1 cut(s) 3696
BfrI CTTAAG 1 cut(s) 311
BfuAI ACCTGC 1 cut(s) 2566
BfuI GTATCC 2 cut(s) 1997, 2471
BglI GCCNNNNNGGC 1 cut(s) 2926
BglII AGATCT 1 cut(s) 3835
BmcAI AGTACT 3 cut(s) 2161, 2954, 3951
Bme1390I CCNGG 4 cut(s) 2036, 2325, 2655, 3730
Bme18I GGWCC 6 cut(s) 557, 773, 1022, 1223, 3148, 3307
BmeT110I CYCGRG 1 cut(s) 1160
BmgT120I GGNCC 7 cut(s) 557, 773, 1022, 1223, 2918, 3148, 3307
BmiI GGNNCC 8 cut(s) 558, 1225, 1820, 2441, 2625, 3308, 3316, 3599
BmrFI CCNGG 4 cut(s) 2036, 2325, 2655, 3730
BmsI GCATC 7 cut(s) 104, 232, 749, 808, 878, 1629, 2752
BmtI GCTAGC 1 cut(s) 1347
BpiI GAAGAC 3 cut(s) 415, 581, 3715
BplI GAGNNNNNCTC 2 cut(s) 3115, 3147
BpmI CTGGAG 2 cut(s) 999, 3120
Bpu10I CCTNAGC 2 cut(s) 279, 1029
Bpu14I TTCGAA 1 cut(s) 1630
BpuEI CTTGAG 7 cut(s) 180, 251, 605, 1516, 1808, 2079, 3872
BpuMI CCSGG 1 cut(s) 3730
Bsa29I ATCGAT 2 cut(s) 324, 2568
BsaAI YACGTR 1 cut(s) 1411
BsaBI GATNNNNATC 2 cut(s) 222, 615
BsaHI GRCGYC 1 cut(s) 2929
BsaI GGTCTC 1 cut(s) 2672
BsaWI WCCGGW 2 cut(s) 2402, 2813
BsaXI ACNNNNNCTCC 4 cut(s) 3118, 3148, 3299, 3329
Bsc4I CCNNNNNNNGG 4 cut(s) 569, 951, 2580, 2753
Bse118I RCCGGY 2 cut(s) 32, 2402
Bse1I ACTGG 5 cut(s) 1009, 1063, 1754, 3027, 3413
Bse21I CCTNAGG 1 cut(s) 2277
Bse3DI GCAATG 3 cut(s) 545, 2697, 3564
Bse8I GATNNNNATC 2 cut(s) 222, 615
BseBI CCWGG 3 cut(s) 2036, 2325, 2655
BseCI ATCGAT 2 cut(s) 324, 2568
BseGI GGATG 5 cut(s) 546, 2386, 2496, 2746, 3018
BseJI GATNNNNATC 2 cut(s) 222, 615
BseLI CCNNNNNNNGG 4 cut(s) 569, 951, 2580, 2753
BseMI GCAATG 3 cut(s) 545, 2697, 3564
BseNI ACTGG 5 cut(s) 1009, 1063, 1754, 3027, 3413
BsePI GCGCGC 1 cut(s) 1417
BseRI GAGGAG 5 cut(s) 183, 296, 1811, 2118, 3123
BseSI GKGCMC 2 cut(s) 2442, 2834
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 3 cut(s) 1419, 1647, 2304
BshFI GGCC 7 cut(s) 201, 599, 1292, 2323, 2757, 2920, 3659
BshNI GGYRCC 2 cut(s) 2439, 3597
BshTI ACCGGT 1 cut(s) 2402
BshVI ATCGAT 2 cut(s) 324, 2568
BsiHKAI GWGCWC 3 cut(s) 2834, 3128, 3510
BsiHKCI CYCGRG 1 cut(s) 1160
BsiSI CCGG 7 cut(s) 33, 600, 1811, 2403, 2814, 3002, 3729
BslFI GGGAC 4 cut(s) 1141, 1209, 3307, 3320
BslI CCNNNNNNNGG 4 cut(s) 569, 951, 2580, 2753
BsmAI GTCTC 5 cut(s) 142, 1157, 1608, 2672, 3848
BsmBI CGTCTC 1 cut(s) 3848
BsmFI GGGAC 4 cut(s) 1141, 1209, 3307, 3320
BsmI GAATGC 2 cut(s) 1133, 1394
BsnI GGCC 7 cut(s) 201, 599, 1292, 2323, 2757, 2920, 3659
Bso31I GGTCTC 1 cut(s) 2672
BsoBI CYCGRG 1 cut(s) 1160
Bsp119I TTCGAA 1 cut(s) 1630
Bsp1286I GDGCHC 5 cut(s) 412, 2442, 2834, 3128, 3510
Bsp19I CCATGG 1 cut(s) 1793
BspACI CCGC 2 cut(s) 1645, 2355
BspANI GGCC 7 cut(s) 201, 599, 1292, 2323, 2757, 2920, 3659
BspDI ATCGAT 2 cut(s) 324, 2568
BspFNI CGCG 3 cut(s) 1419, 1647, 2304
BspHI TCATGA 2 cut(s) 289, 1548
BspLI GGNNCC 8 cut(s) 558, 1225, 1820, 2441, 2625, 3308, 3316, 3599
BspMAI CTGCAG 2 cut(s) 1152, 2563
BspMI ACCTGC 1 cut(s) 2566
BspOI GCTAGC 1 cut(s) 1347
BspQI GCTCTTC 1 cut(s) 1787
BspT104I TTCGAA 1 cut(s) 1630
BspT107I GGYRCC 2 cut(s) 2439, 3597
BspTI CTTAAG 1 cut(s) 311
BspTNI GGTCTC 1 cut(s) 2672
BsrDI GCAATG 3 cut(s) 545, 2697, 3564
BsrFI RCCGGY 2 cut(s) 32, 2402
BsrI ACTGG 5 cut(s) 1009, 1063, 1754, 3027, 3413
BssAI RCCGGY 2 cut(s) 32, 2402
BssHII GCGCGC 1 cut(s) 1417
BssNI GRCGYC 1 cut(s) 2929
BssSI CACGAG 2 cut(s) 662, 1947
BssT1I CCWWGG 8 cut(s) 741, 763, 945, 1123, 1695, 1793, 2266, 3310
Bst2BI CACGAG 2 cut(s) 662, 1947
Bst2UI CCWGG 3 cut(s) 2036, 2325, 2655
Bst6I CTCTTC 3 cut(s) 802, 1547, 1787
BstACI GRCGYC 1 cut(s) 2929
BstAFI CTTAAG 1 cut(s) 311
BstAPI GCANNNNNTGC 6 cut(s) 2771, 3201, 3248, 3497, 3707, 3935
BstBAI YACGTR 1 cut(s) 1411
BstBI TTCGAA 1 cut(s) 1630
BstDSI CCRYGG 1 cut(s) 1793
BstF5I GGATG 5 cut(s) 546, 2386, 2496, 2746, 3018
BstFNI CGCG 3 cut(s) 1419, 1647, 2304
BstH2I RGCGCY 1 cut(s) 3696
BstHHI GCGC 7 cut(s) 1419, 1421, 1682, 1988, 2304, 3234, 3695
BstMAI GTCTC 5 cut(s) 142, 1157, 1608, 2672, 3848
BstNI CCWGG 3 cut(s) 2036, 2325, 2655
BstNSI RCATGY 7 cut(s) 661, 1238, 1967, 2011, 2248, 2513, 3789
BstSCI CCNGG 4 cut(s) 2034, 2323, 2653, 3728
BstSFI CTRYAG 4 cut(s) 1148, 1740, 2559, 3839
BstSLI GKGCMC 2 cut(s) 2442, 2834
BstUI CGCG 3 cut(s) 1419, 1647, 2304
BstV2I GAAGAC 3 cut(s) 415, 581, 3715
BstX2I RGATCY 6 cut(s) 616, 835, 1827, 2623, 3337, 3835
BstXI CCANNNNNNTGG 1 cut(s) 3798
BstYI RGATCY 6 cut(s) 616, 835, 1827, 2623, 3337, 3835
Bsu15I ATCGAT 2 cut(s) 324, 2568
Bsu36I CCTNAGG 1 cut(s) 2277
BsuI GTATCC 2 cut(s) 1997, 2471
BsuRI GGCC 7 cut(s) 201, 599, 1292, 2323, 2757, 2920, 3659
BsuTUI ATCGAT 2 cut(s) 324, 2568
BtgI CCRYGG 1 cut(s) 1793
BtsCI GGATG 5 cut(s) 546, 2386, 2496, 2746, 3018
BtsIMutI CAGTG 4 cut(s) 523, 1619, 1761, 2314
BveI ACCTGC 1 cut(s) 2566
CaiI CAGNNNCTG 1 cut(s) 3340
CciI TCATGA 2 cut(s) 289, 1548
CfoI GCGC 7 cut(s) 1419, 1421, 1682, 1988, 2304, 3234, 3695
Cfr10I RCCGGY 2 cut(s) 32, 2402
Cfr13I GGNCC 7 cut(s) 557, 773, 1022, 1223, 2918, 3148, 3307
ClaI ATCGAT 2 cut(s) 324, 2568
CseI GACGC 2 cut(s) 2293, 2918
Csp6I GTAC 9 cut(s) 1959, 2160, 2384, 2536, 2953, 3598, 3628, 3775, 3950
CspAI ACCGGT 1 cut(s) 2402
CviQI GTAC 9 cut(s) 1959, 2160, 2384, 2536, 2953, 3598, 3628, 3775, 3950
DraIII CACNNNGTG 1 cut(s) 2075
EaeI YGGCCR 2 cut(s) 597, 1290
Eam1104I CTCTTC 3 cut(s) 802, 1547, 1787
EarI CTCTTC 3 cut(s) 802, 1547, 1787
Ecl136II GAGCTC 1 cut(s) 3508
Eco130I CCWWGG 8 cut(s) 741, 763, 945, 1123, 1695, 1793, 2266, 3310
Eco24I GRGCYC 2 cut(s) 412, 3510
Eco31I GGTCTC 1 cut(s) 2672
Eco32I GATATC 2 cut(s) 850, 2857
Eco47I GGWCC 6 cut(s) 557, 773, 1022, 1223, 3148, 3307
Eco47III AGCGCT 1 cut(s) 3694
Eco53kI GAGCTC 1 cut(s) 3508
Eco57I CTGAAG 4 cut(s) 408, 932, 1249, 2909
Eco81I CCTNAGG 1 cut(s) 2277
Eco88I CYCGRG 1 cut(s) 1160
EcoICRI GAGCTC 1 cut(s) 3508
EcoO109I RGGNCCY 4 cut(s) 557, 1223, 3148, 3307
EcoRI GAATTC 3 cut(s) 1093, 1558, 3394
EcoRII CCWGG 3 cut(s) 2034, 2323, 2653
EcoRV GATATC 2 cut(s) 850, 2857
EcoT14I CCWWGG 8 cut(s) 741, 763, 945, 1123, 1695, 1793, 2266, 3310
EcoT22I ATGCAT 3 cut(s) 1969, 3197, 3487
EcoT38I GRGCYC 2 cut(s) 412, 3510
ErhI CCWWGG 8 cut(s) 741, 763, 945, 1123, 1695, 1793, 2266, 3310
Esp3I CGTCTC 1 cut(s) 3848
FalI AAGNNNNNCTT 6 cut(s) 236, 268, 625, 657, 1766, 1798
FaqI GGGAC 4 cut(s) 1141, 1209, 3307, 3320
FauNDI CATATG 1 cut(s) 1801
FokI GGATG 5 cut(s) 553, 2393, 2483, 2753, 3025
FriOI GRGCYC 2 cut(s) 412, 3510
FspBI CTAG 9 cut(s) 266, 791, 1344, 2387, 2711, 2759, 3696, 3750, 3914
GlaI GCGC 7 cut(s) 1418, 1420, 1681, 1987, 2303, 3233, 3694
GsuI CTGGAG 2 cut(s) 999, 3120
HaeII RGCGCY 1 cut(s) 3696
HaeIII GGCC 7 cut(s) 201, 599, 1292, 2323, 2757, 2920, 3659
HapII CCGG 7 cut(s) 33, 600, 1811, 2403, 2814, 3002, 3729
HgaI GACGC 2 cut(s) 2293, 2918
HhaI GCGC 7 cut(s) 1419, 1421, 1682, 1988, 2304, 3234, 3695
Hin1I GRCGYC 1 cut(s) 2929
Hin6I GCGC 7 cut(s) 1417, 1419, 1680, 1986, 2302, 3232, 3693
HinP1I GCGC 7 cut(s) 1417, 1419, 1680, 1986, 2302, 3232, 3693
HincII GTYRAC 1 cut(s) 701
HindII GTYRAC 1 cut(s) 701
HindIII AAGCTT 4 cut(s) 1521, 1580, 1748, 2119
HpaII CCGG 7 cut(s) 33, 600, 1811, 2403, 2814, 3002, 3729
HphI GGTGA 7 cut(s) 218, 1019, 1828, 1861, 2206, 3016, 3625
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 7 cut(s) 45, 426, 481, 853, 907, 1637, 3646
HpyCH4IV ACGT 4 cut(s) 1110, 1410, 2913, 3678
HpySE526I ACGT 4 cut(s) 1110, 1410, 2913, 3678
Hsp92I GRCGYC 1 cut(s) 2929
HspAI GCGC 7 cut(s) 1417, 1419, 1680, 1986, 2302, 3232, 3693
KpnI GGTACC 1 cut(s) 3601
LguI GCTCTTC 1 cut(s) 1787
LmnI GCTCC 6 cut(s) 1330, 1824, 1991, 3320, 3513, 3801
LweI GCATC 7 cut(s) 104, 232, 749, 808, 878, 1629, 2752
MaeI CTAG 9 cut(s) 266, 791, 1344, 2387, 2711, 2759, 3696, 3750, 3914
MaeII ACGT 4 cut(s) 1110, 1410, 2913, 3678
MfeI CAATTG 4 cut(s) 959, 2778, 3351, 3501
MflI RGATCY 6 cut(s) 616, 835, 1827, 2623, 3337, 3835
MhlI GDGCHC 5 cut(s) 412, 2442, 2834, 3128, 3510
MlyI GAGTC 3 cut(s) 1005, 1262, 2119
MmeI TCCRAC 7 cut(s) 85, 313, 379, 751, 1612, 2601, 2997
Mph1103I ATGCAT 3 cut(s) 1969, 3197, 3487
MroXI GAANNNNTTC 4 cut(s) 55, 1236, 3466, 3722
MspA1I CMGCKG 3 cut(s) 15, 386, 1472
MspCI CTTAAG 1 cut(s) 311
MspI CCGG 7 cut(s) 33, 600, 1811, 2403, 2814, 3002, 3729
MspR9I CCNGG 4 cut(s) 2036, 2325, 2655, 3730
MunI CAATTG 4 cut(s) 959, 2778, 3351, 3501
Mva1269I GAATGC 2 cut(s) 1133, 1394
MvaI CCWGG 3 cut(s) 2036, 2325, 2655
MvnI CGCG 3 cut(s) 1419, 1647, 2304
NciI CCSGG 1 cut(s) 3730
NcoI CCATGG 1 cut(s) 1793
NdeI CATATG 1 cut(s) 1801
NheI GCTAGC 1 cut(s) 1343
NlaIV GGNNCC 8 cut(s) 558, 1225, 1820, 2441, 2625, 3308, 3316, 3599
NmuCI GTSAC 8 cut(s) 17, 35, 637, 895, 997, 1309, 3022, 3580
NsiI ATGCAT 3 cut(s) 1969, 3197, 3487
NspI RCATGY 7 cut(s) 661, 1238, 1967, 2011, 2248, 2513, 3789
NspV TTCGAA 1 cut(s) 1630
PaeI GCATGC 1 cut(s) 661
PagI TCATGA 2 cut(s) 289, 1548
PauI GCGCGC 1 cut(s) 1417
PciI ACATGT 2 cut(s) 1234, 2509
PciSI GCTCTTC 1 cut(s) 1787
PcsI WCGNNNNNNNCGW 1 cut(s) 1954
PctI GAATGC 2 cut(s) 1133, 1394
PdmI GAANNNNTTC 4 cut(s) 55, 1236, 3466, 3722
PflMI CCANNNNNTGG 1 cut(s) 2753
PinAI ACCGGT 1 cut(s) 2402
PleI GAGTC 3 cut(s) 1004, 1261, 2119
PpsI GAGTC 3 cut(s) 1004, 1261, 2119
Ppu21I YACGTR 1 cut(s) 1411
PpuMI RGGWCCY 4 cut(s) 557, 1223, 3148, 3307
PscI ACATGT 2 cut(s) 1234, 2509
PshBI ATTAAT 1 cut(s) 1659
PsiI TTATAA 3 cut(s) 1764, 2997, 3075
Psp124BI GAGCTC 1 cut(s) 3510
Psp5II RGGWCCY 4 cut(s) 557, 1223, 3148, 3307
Psp6I CCWGG 3 cut(s) 2034, 2323, 2653
PspGI CCWGG 3 cut(s) 2034, 2323, 2653
PspN4I GGNNCC 8 cut(s) 558, 1225, 1820, 2441, 2625, 3308, 3316, 3599
PspPI GGNCC 7 cut(s) 557, 773, 1022, 1223, 2918, 3148, 3307
PspPPI RGGWCCY 4 cut(s) 557, 1223, 3148, 3307
PstI CTGCAG 2 cut(s) 1152, 2563
PstNI CAGNNNCTG 1 cut(s) 3340
PsuI RGATCY 6 cut(s) 616, 835, 1827, 2623, 3337, 3835
PteI GCGCGC 1 cut(s) 1417
PvuII CAGCTG 3 cut(s) 15, 386, 1472
RsaI GTAC 9 cut(s) 1960, 2161, 2385, 2537, 2954, 3599, 3629, 3776, 3951
RsaNI GTAC 9 cut(s) 1959, 2160, 2384, 2536, 2953, 3598, 3628, 3775, 3950
SacI GAGCTC 1 cut(s) 3510
SapI GCTCTTC 1 cut(s) 1787
Sau96I GGNCC 7 cut(s) 557, 773, 1022, 1223, 2918, 3148, 3307
ScaI AGTACT 3 cut(s) 2161, 2954, 3951
SchI GAGTC 3 cut(s) 1005, 1262, 2119
ScrFI CCNGG 4 cut(s) 2036, 2325, 2655, 3730
SduI GDGCHC 5 cut(s) 412, 2442, 2834, 3128, 3510
SfaNI GCATC 7 cut(s) 104, 232, 749, 808, 878, 1629, 2752
SfcI CTRYAG 4 cut(s) 1148, 1740, 2559, 3839
SfuI TTCGAA 1 cut(s) 1630
SinI GGWCC 6 cut(s) 557, 773, 1022, 1223, 3148, 3307
SmlI CTYRAG 8 cut(s) 195, 230, 311, 620, 1531, 1823, 2094, 3851
SmoI CTYRAG 8 cut(s) 195, 230, 311, 620, 1531, 1823, 2094, 3851
SpeI ACTAGT 1 cut(s) 2710
SphI GCATGC 1 cut(s) 661
SsiI CCGC 2 cut(s) 1645, 2355
SspI AATATT 1 cut(s) 1599
SspMI CTAG 9 cut(s) 266, 791, 1344, 2387, 2711, 2759, 3696, 3750, 3914
SstI GAGCTC 1 cut(s) 3510
StyD4I CCNGG 4 cut(s) 2034, 2323, 2653, 3728
StyI CCWWGG 8 cut(s) 741, 763, 945, 1123, 1695, 1793, 2266, 3310
TaiI ACGT 4 cut(s) 1113, 1413, 2916, 3681
TatI WGTACW 6 cut(s) 2159, 2383, 2535, 2952, 3627, 3949
TscAI CASTG 4 cut(s) 523, 1626, 1761, 2314
TseFI GTSAC 8 cut(s) 17, 35, 637, 895, 997, 1309, 3022, 3580
Tsp45I GTSAC 8 cut(s) 17, 35, 637, 895, 997, 1309, 3022, 3580
TspGWI ACGGA 1 cut(s) 2616
TspRI CASTG 4 cut(s) 523, 1626, 1761, 2314
Van91I CCANNNNNTGG 1 cut(s) 2753
Vha464I CTTAAG 1 cut(s) 311
VneI GTGCAC 1 cut(s) 2830
VpaK11BI GGWCC 6 cut(s) 557, 773, 1022, 1223, 3148, 3307
VspI ATTAAT 1 cut(s) 1659
XceI RCATGY 7 cut(s) 661, 1238, 1967, 2011, 2248, 2513, 3789
XcmI CCANNNNNNNNNTGG 2 cut(s) 586, 2734
XmnI GAANNNNTTC 4 cut(s) 55, 1236, 3466, 3722
XspI CTAG 9 cut(s) 266, 791, 1344, 2387, 2711, 2759, 3696, 3750, 3914
ZrmI AGTACT 3 cut(s) 2161, 2954, 3951
Zsp2I ATGCAT 3 cut(s) 1969, 3197, 3487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.