RLG00000012578
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
20086398 .. 20095905
9508 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012578

Sequence Viewer

Length: 3912 bp
ATGGAGATCATCAGCTGTGACCTTGAAAAAGCCGGTCACAGTTTCAACAGAAGGGGTTCGTTTTGGACTGACGATGGCAGGGCTGTTTTCTCAGCATCTTCTGTTGGAGAGGACGACGAGGAAGCTCTCAAATGGGCAGCTTTGCAGAGACTTCTTACATTCACTCGTTTGAAAAAAGGTCTGCTCACTACTCCTCAAGGCCATGCCAACGAAGTCGATGTGCATCACCTTGAGCTGCAAGAAAAGAAAGACTTGATCGAGAGGCTAGTGGGAGTTGCCGAGGAGGATCATGAGAAATTTTTGATGAGGCTTAAGAGCCGAATTGATAGAGTTGGAATTAGTGTTCCTACGATTGAAGTTAGGTTCGAGCATTTGAAAATTGCAGCTGAAGCTCATGTTGGAGGCAGGGCTCTGCCTTCTGTCTTCAATTATTGTGTTAATGTAGTGGGTTTCTTGAATTGCCTGCACATTCTTCCTGAAAAGAAGGAACATTTGTCTATACTGAAAGATGTCAGTGGGATCATCAAGCCTTGCAGGATGACATTGCTTTTGGGTCCTCCAAGTTCGGGGAAGACCACGCTCTTGCTGGCTTTGGCCGGAGAGCTTGATAAGGATCTCAAGGTTTCAGGAAGTGTGACTTACAATGGTCATGGCATGCACGAGTTTGTGCCTCAGAGAAGTGCTGCATATATCAGTCAACATGATGTTCATATTGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCTGCAAGATGCCAAGGGGTCGGACCTCGTTATGAGCTGCTAGTAGAGCTAAGTAGAAGAGAGAAAGATGCAAGTATTAAGCCAGATCCAGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGTGAAAGAGCAGCATTTGTGACAAATTATATTCTGAAGGTTTTGGGATTGGAGGGCTGTGCAAATACCTTGGTAGGGGATCAATTGATAAGGGGTATCTCTGGAGGACAAAAGAAGCGAGTCACAACTGGTGAGATGTTAGTTGGTCCTGCTAAGGCACTATTCATGGACGAAATATCGACTGGTTTGGATAGTTCAACAACTTATCAAATAGTGAATTCCATCAAGCAATACGTTCACATTCTCCAAGGGACTGCATTCATCTCACTACTGCAGCCAGCACCCGAGACTTATGATCTATTTGATGACATTATTCTCCTTTCTGATGGTCAAATTGTGTATCAAGGTCCCCGTGAACATGTTCTCGATTTTTTTGAGTCTATGGGCTTCAGATGTCCAGAGAGAAAGGGTGTGGCCGATTTCCTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAGTATTGGGCTAGCAGAGATGAACCATACAGGTTCATCACAGTAGAAAAATTTTCCGAGGCATTCCAATCTTTCCACGTAGGGCGCGCAATTACACATGAACTTGCTACTCCATTTGACAAGACCACAAGCCACTCAACTGCATTAACGACAAAAAAATATGGTGTTAAAAGAGCAGAACTGCTGAAAGCTTGTTTCTCAAGGGAGTTCTTGCTCATGAAGAGGAATTCATTTGTTTACCTTTTCAAGCTTATCCAACTCTCAATATTGTCTCTGATTACAATGACACTGTTCCTTCGAACTAAGATGCACCGCGATTCAGTAATTAATGGAGGAATTTGTGCTGGCGCATTATTCTTCTCCTTGGTTGCTGTTATGTTCAATGGAATGGCAGAGCTTTCGATGACTATAGCCAAGCTTCCAGTGTTTTATAAGCACAGAAAGCTGCTCTTCTTTCCACCATGGGCATATGCACTTCCGGCATGGCTCCTCAAGATCCCTCTCACCTGTGTTGAAGTTGGTGTTTGGGTAGTTATCACCTATTATGTCATTGACTTTGATCCAAATGTTCTTCCAAACTCAAATGAATCATTAGGTGTTGAAATTCTGAAATCTCGTGGATTTCGTACACATGCATATTGGTATTGGATTGGCGCAGGAGCATTGGCTGGATACATGCTCTTATTCAACATTTGTTACACCCTGGCTCTCACTTATCTAAACCCTTTGGACAAGCCACAGGGTGTTAAATCAGAAGAATCTCAAGGCAATAAAGATGATGACAAAAGCTTGACTCCTCAAATCAGCAAAGATACACATAATTTTTTTGGAAATGCGGAGAAAGGAGATGGAAGTACTACTCATAACACGAAAAGAGGAATGGTTCTTCCATTTGAACCATATTCCATCACCTTTGATGAAATCTCATACTCGGTGGACATGCCACAGGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTACTCAGGCGCGTCAGTGGTGCTTTCAGGCCAGGTATTCTCACAGCTTTGATGGGAGTTAGCGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGGAAAACCGGTGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAACAGAATGACATCCATTCTCCACATGTTACTATGTTTGTCGAGGAAGTGATGGCACTTGTGGAGTTGGATCCGTTAAGGCAAGCACTTGTAGGGTTGCCCGGTGCAAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACTATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACTTCTGGCCTAGATGCAATAGCTGCTGCAATTGTTATGAGAACAGTTAGGAATACTGTGGACACCGGAAGAACAGTTTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTTGGGCCATTGGGGCGTCATTCTTGCCATTTAATCAAGTACTTTGAGGGAATTGATAATGTCAGTAAGATTAAGGACGGTTATAATCCGGCAACTTGGATGTTGGAAGTCACCAGTTCTGCGAAAGAAATAGCTTCTGGTGTTGATTTTGCTGATATTTATAAAAATTCAGAGCTATACAGGAGAAACAAAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGATTCTAAGGACCTGTATTTCCCTACTCAATACTCTCAGCCATTTTTAACACAATGCATGGCTTGCTTATGGAAACAACATTGGTCGTATTGGCGCAATCCAGCATATACTGCCATAAAGTTGATATACACAACCATCATAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAACGAAAAAACAACAGGATCTGTTCAATGCAATTGGTTCTATGTATGCTGCTGTTCTGTTTCTTGGTATTAAGAATTCAACAACAGTTCAGCCAGTAGTGTCTGTCGAACGAACAGTCTTTTATAGAGAACAAGCTGCTGGAATGTATTCTCCATTGGCTTATGCATTTGCACAGGTTGCAGTTGAGCTCCCATATATTTTTGCCCAAACAATTCTCTATGGTGTCATAGTCTATGCAATGATCGGTTTTGAGTGGACTGTGACTAAATTCTCATGGTACCTATTTTTCATGTATTTCACATTTCTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCTTTACACCGAACCAGCACGTTGCTGCTATAAGCGCTAGTGCATTTTATGCAGTATGGAATGTCTTCTCCGGGTTCATTATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGCATGTCCAATGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATCTACATAACGAGCTTGAGACGGGCGAAACTGTGGAACAATTTATGAGGACTTACTTTGGCTTCAAACATGAATTTCTAGGAGTGGTTGCAGCAGTAGTTGCTGGATTTGCAGTACTCTTTGCATTTGTCTTTGCCTTTTCAATTAAGAAGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1304

Amino Acids

146.46

Weight (kDa)

7.19

Isoelectric Point (pI)

35.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 168 - 349 3.8e-15 ABC transporter
ABC2_membrane_7 PF19055 383 - 435 8.9e-06 ABC-2 type transporter
ABC2_membrane PF01061 504 - 633 2e-24 ABC-2 type transporter
PDR_assoc PF08370 635 - 691 1.5e-27 Plant PDR ABC transporter associated
ABC_tran PF00005 774 - 903 1.5e-17 ABC transporter
ABC2_membrane PF01061 1031 - 1245 1.3e-57 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1761, 2901, 2979
Acc65I GGTACC 1 cut(s) 3501
AccB1I GGYRCC 2 cut(s) 2463, 3501
AccB7I CCANNNNNTGG 1 cut(s) 2708
AccII CGCG 3 cut(s) 1416, 1644, 2328
AciI CCGC 3 cut(s) 1642, 2165, 2379
AcoI YGGCCR 2 cut(s) 594, 1287
AcuI CTGAAG 4 cut(s) 408, 929, 1246, 2813
AcyI GRCGYC 1 cut(s) 2833
AdeI CACNNNGTG 1 cut(s) 2072
AfaI GTAC 8 cut(s) 1957, 2185, 2409, 2858, 3503, 3533, 3680, 3855
AfeI AGCGCT 1 cut(s) 3598
AfiI CCNNNNNNNGG 3 cut(s) 566, 948, 2708
AflII CTTAAG 1 cut(s) 311
AflIII ACRYGT 2 cut(s) 1231, 2533
AgeI ACCGGT 1 cut(s) 2426
AhlI ACTAGT 1 cut(s) 2665
AjnI CCWGG 2 cut(s) 2031, 2347
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
AloI GAACNNNNNNTCC 4 cut(s) 327, 359, 3643, 3675
Alw21I GWGCWC 2 cut(s) 3032, 3414
Alw26I GTCTC 5 cut(s) 142, 1154, 1605, 2627, 3752
AlwNI CAGNNNCTG 1 cut(s) 3244
Ama87I CYCGRG 1 cut(s) 1157
Aor51HI AGCGCT 1 cut(s) 3598
AoxI GGCC 7 cut(s) 199, 594, 1287, 2345, 2710, 2822, 3561
ArsI GACNNNNNNTTYG 4 cut(s) 532, 564, 3324, 3356
AseI ATTAAT 1 cut(s) 1656
AsiGI ACCGGT 1 cut(s) 2426
Asp700I GAANNNNTTC 4 cut(s) 55, 1233, 3370, 3626
Asp718I GGTACC 1 cut(s) 3501
AspLEI GCGC 7 cut(s) 1416, 1418, 1679, 1985, 2328, 3138, 3599
AspS9I GGNCC 7 cut(s) 554, 770, 1019, 1220, 2822, 3052, 3211
AsuC2I CCSGG 2 cut(s) 2610, 3634
AsuHPI GGTGA 7 cut(s) 218, 1016, 1825, 1858, 2230, 2920, 3529
AsuII TTCGAA 1 cut(s) 1627
AsuNHI GCTAGC 1 cut(s) 1340
AvaI CYCGRG 1 cut(s) 1157
AvaII GGWCC 6 cut(s) 554, 770, 1019, 1220, 3052, 3211
AxyI CCTNAGG 1 cut(s) 2301
BaeGI GKGCMC 1 cut(s) 2466
BamHI GGATCC 1 cut(s) 2578
BanI GGYRCC 2 cut(s) 2463, 3501
BanII GRGCYC 2 cut(s) 412, 3414
BarI GAAGNNNNNNTAC 2 cut(s) 3524, 3556
BauI CACGAG 2 cut(s) 659, 1944
BbsI GAAGAC 3 cut(s) 415, 578, 3619
Bbv12I GWGCWC 2 cut(s) 3032, 3414
BcgI CGANNNNNNTGC 2 cut(s) 1710, 1744
BciT130I CCWGG 2 cut(s) 2033, 2349
BciVI GTATCC 2 cut(s) 1994, 2495
BcnI CCSGG 2 cut(s) 2610, 3634
BcoDI GTCTC 5 cut(s) 142, 1154, 1605, 2627, 3752
BcuI ACTAGT 1 cut(s) 2665
BfaI CTAG 9 cut(s) 266, 788, 1341, 2411, 2666, 2714, 3600, 3654, 3818
BfmI CTRYAG 2 cut(s) 1145, 1737
BfoI RGCGCY 1 cut(s) 3600
BfrI CTTAAG 1 cut(s) 311
BfuI GTATCC 2 cut(s) 1994, 2495
BglI GCCNNNNNGGC 1 cut(s) 2830
BglII AGATCT 1 cut(s) 3739
BmcAI AGTACT 3 cut(s) 2185, 2858, 3855
Bme1390I CCNGG 4 cut(s) 2033, 2349, 2610, 3634
Bme18I GGWCC 6 cut(s) 554, 770, 1019, 1220, 3052, 3211
BmeT110I CYCGRG 1 cut(s) 1157
BmgT120I GGNCC 7 cut(s) 554, 770, 1019, 1220, 2822, 3052, 3211
BmiI GGNNCC 8 cut(s) 555, 1222, 1817, 2465, 2580, 3212, 3220, 3503
BmrFI CCNGG 4 cut(s) 2033, 2349, 2610, 3634
BmsI GCATC 7 cut(s) 104, 232, 746, 805, 875, 1626, 2707
BmtI GCTAGC 1 cut(s) 1344
BpiI GAAGAC 3 cut(s) 415, 578, 3619
BplI GAGNNNNNCTC 2 cut(s) 3019, 3051
BpmI CTGGAG 2 cut(s) 996, 3024
Bpu10I CCTNAGC 1 cut(s) 1026
Bpu14I TTCGAA 1 cut(s) 1627
BpuEI CTTGAG 7 cut(s) 180, 251, 602, 1513, 1805, 2076, 3776
BpuMI CCSGG 2 cut(s) 2610, 3634
BsaAI YACGTR 1 cut(s) 1408
BsaBI GATNNNNATC 2 cut(s) 222, 612
BsaHI GRCGYC 1 cut(s) 2833
BsaI GGTCTC 1 cut(s) 2627
BsaWI WCCGGW 2 cut(s) 2426, 2768
BsaXI ACNNNNNCTCC 4 cut(s) 3022, 3052, 3203, 3233
Bsc4I CCNNNNNNNGG 3 cut(s) 566, 948, 2708
Bse118I RCCGGY 2 cut(s) 32, 2426
Bse1I ACTGG 5 cut(s) 1006, 1060, 1751, 2931, 3317
Bse21I CCTNAGG 1 cut(s) 2301
Bse3DI GCAATG 2 cut(s) 542, 3468
Bse8I GATNNNNATC 2 cut(s) 222, 612
BseBI CCWGG 2 cut(s) 2033, 2349
BseGI GGATG 5 cut(s) 543, 2410, 2520, 2701, 2922
BseJI GATNNNNATC 2 cut(s) 222, 612
BseLI CCNNNNNNNGG 3 cut(s) 566, 948, 2708
BseMI GCAATG 2 cut(s) 542, 3468
BseMII CTCAG 7 cut(s) 105, 686, 2292, 2335, 2622, 3017, 3092
BseNI ACTGG 5 cut(s) 1006, 1060, 1751, 2931, 3317
BsePI GCGCGC 1 cut(s) 1414
BseRI GAGGAG 5 cut(s) 183, 296, 1808, 2115, 3027
BseSI GKGCMC 1 cut(s) 2466
BsgI GTGCAG 1 cut(s) 449
Bsh1236I CGCG 3 cut(s) 1416, 1644, 2328
BshFI GGCC 7 cut(s) 201, 596, 1289, 2347, 2712, 2824, 3563
BshNI GGYRCC 2 cut(s) 2463, 3501
BshTI ACCGGT 1 cut(s) 2426
BsiHKAI GWGCWC 2 cut(s) 3032, 3414
BsiHKCI CYCGRG 1 cut(s) 1157
BsiSI CCGG 8 cut(s) 33, 597, 1808, 2427, 2610, 2769, 2906, 3633
BslFI GGGAC 4 cut(s) 1138, 1206, 3211, 3224
BslI CCNNNNNNNGG 3 cut(s) 566, 948, 2708
BsmAI GTCTC 5 cut(s) 142, 1154, 1605, 2627, 3752
BsmBI CGTCTC 1 cut(s) 3752
BsmFI GGGAC 4 cut(s) 1138, 1206, 3211, 3224
BsmI GAATGC 2 cut(s) 1130, 1391
BsnI GGCC 7 cut(s) 201, 596, 1289, 2347, 2712, 2824, 3563
Bso31I GGTCTC 1 cut(s) 2627
BsoBI CYCGRG 1 cut(s) 1157
Bsp119I TTCGAA 1 cut(s) 1627
Bsp1286I GDGCHC 4 cut(s) 412, 2466, 3032, 3414
Bsp19I CCATGG 1 cut(s) 1790
BspACI CCGC 3 cut(s) 1642, 2165, 2379
BspANI GGCC 7 cut(s) 201, 596, 1289, 2347, 2712, 2824, 3563
BspCNI CTCAG 7 cut(s) 104, 685, 2293, 2334, 2623, 3018, 3091
BspFNI CGCG 3 cut(s) 1416, 1644, 2328
BspHI TCATGA 2 cut(s) 289, 1545
BspLI GGNNCC 8 cut(s) 555, 1222, 1817, 2465, 2580, 3212, 3220, 3503
BspMAI CTGCAG 1 cut(s) 1149
BspOI GCTAGC 1 cut(s) 1344
BspQI GCTCTTC 1 cut(s) 1784
BspT104I TTCGAA 1 cut(s) 1627
BspT107I GGYRCC 2 cut(s) 2463, 3501
BspTI CTTAAG 1 cut(s) 311
BspTNI GGTCTC 1 cut(s) 2627
BsrDI GCAATG 2 cut(s) 542, 3468
BsrFI RCCGGY 2 cut(s) 32, 2426
BsrI ACTGG 5 cut(s) 1006, 1060, 1751, 2931, 3317
BssAI RCCGGY 2 cut(s) 32, 2426
BssHII GCGCGC 1 cut(s) 1414
BssNI GRCGYC 1 cut(s) 2833
BssSI CACGAG 2 cut(s) 659, 1944
BssT1I CCWWGG 8 cut(s) 738, 760, 942, 1120, 1692, 1790, 2290, 3214
Bst2BI CACGAG 2 cut(s) 659, 1944
Bst2UI CCWGG 2 cut(s) 2033, 2349
Bst6I CTCTTC 3 cut(s) 799, 1544, 1784
BstACI GRCGYC 1 cut(s) 2833
BstAFI CTTAAG 1 cut(s) 311
BstAPI GCANNNNNTGC 6 cut(s) 2726, 3105, 3152, 3401, 3611, 3839
BstBAI YACGTR 1 cut(s) 1408
BstBI TTCGAA 1 cut(s) 1627
BstDSI CCRYGG 1 cut(s) 1790
BstF5I GGATG 5 cut(s) 543, 2410, 2520, 2701, 2922
BstFNI CGCG 3 cut(s) 1416, 1644, 2328
BstH2I RGCGCY 1 cut(s) 3600
BstHHI GCGC 7 cut(s) 1416, 1418, 1679, 1985, 2328, 3138, 3599
BstMAI GTCTC 5 cut(s) 142, 1154, 1605, 2627, 3752
BstNI CCWGG 2 cut(s) 2033, 2349
BstNSI RCATGY 7 cut(s) 658, 1235, 1964, 2008, 2272, 2537, 3693
BstSCI CCNGG 4 cut(s) 2031, 2347, 2608, 3632
BstSFI CTRYAG 2 cut(s) 1145, 1737
BstSLI GKGCMC 1 cut(s) 2466
BstUI CGCG 3 cut(s) 1416, 1644, 2328
BstV2I GAAGAC 3 cut(s) 415, 578, 3619
BstX2I RGATCY 6 cut(s) 613, 832, 1824, 2578, 3241, 3739
BstXI CCANNNNNNTGG 1 cut(s) 3702
BstYI RGATCY 6 cut(s) 613, 832, 1824, 2578, 3241, 3739
Bsu36I CCTNAGG 1 cut(s) 2301
BsuI GTATCC 2 cut(s) 1994, 2495
BsuRI GGCC 7 cut(s) 201, 596, 1289, 2347, 2712, 2824, 3563
BtgI CCRYGG 1 cut(s) 1790
BtsCI GGATG 5 cut(s) 543, 2410, 2520, 2701, 2922
BtsIMutI CAGTG 4 cut(s) 520, 1616, 1758, 2338
CaiI CAGNNNCTG 1 cut(s) 3244
CciI TCATGA 2 cut(s) 289, 1545
CfoI GCGC 7 cut(s) 1416, 1418, 1679, 1985, 2328, 3138, 3599
Cfr10I RCCGGY 2 cut(s) 32, 2426
Cfr13I GGNCC 7 cut(s) 554, 770, 1019, 1220, 2822, 3052, 3211
CseI GACGC 2 cut(s) 2317, 2822
Csp6I GTAC 8 cut(s) 1956, 2184, 2408, 2857, 3502, 3532, 3679, 3854
CspAI ACCGGT 1 cut(s) 2426
CviQI GTAC 8 cut(s) 1956, 2184, 2408, 2857, 3502, 3532, 3679, 3854
DraIII CACNNNGTG 1 cut(s) 2072
EaeI YGGCCR 2 cut(s) 594, 1287
Eam1104I CTCTTC 3 cut(s) 799, 1544, 1784
EarI CTCTTC 3 cut(s) 799, 1544, 1784
Ecl136II GAGCTC 1 cut(s) 3412
Eco130I CCWWGG 8 cut(s) 738, 760, 942, 1120, 1692, 1790, 2290, 3214
Eco24I GRGCYC 2 cut(s) 412, 3414
Eco31I GGTCTC 1 cut(s) 2627
Eco32I GATATC 1 cut(s) 847
Eco47I GGWCC 6 cut(s) 554, 770, 1019, 1220, 3052, 3211
Eco47III AGCGCT 1 cut(s) 3598
Eco53kI GAGCTC 1 cut(s) 3412
Eco57I CTGAAG 4 cut(s) 408, 929, 1246, 2813
Eco81I CCTNAGG 1 cut(s) 2301
Eco88I CYCGRG 1 cut(s) 1157
EcoICRI GAGCTC 1 cut(s) 3412
EcoO109I RGGNCCY 4 cut(s) 554, 1220, 3052, 3211
EcoRI GAATTC 3 cut(s) 1090, 1555, 3298
EcoRII CCWGG 2 cut(s) 2031, 2347
EcoRV GATATC 1 cut(s) 847
EcoT14I CCWWGG 8 cut(s) 738, 760, 942, 1120, 1692, 1790, 2290, 3214
EcoT22I ATGCAT 3 cut(s) 1966, 3101, 3391
EcoT38I GRGCYC 2 cut(s) 412, 3414
ErhI CCWWGG 8 cut(s) 738, 760, 942, 1120, 1692, 1790, 2290, 3214
Esp3I CGTCTC 1 cut(s) 3752
FalI AAGNNNNNCTT 7 cut(s) 236, 268, 622, 654, 1763, 1795, 3881
FaqI GGGAC 4 cut(s) 1138, 1206, 3211, 3224
FauNDI CATATG 1 cut(s) 1798
FokI GGATG 5 cut(s) 550, 2417, 2507, 2708, 2929
FriOI GRGCYC 2 cut(s) 412, 3414
FspBI CTAG 9 cut(s) 266, 788, 1341, 2411, 2666, 2714, 3600, 3654, 3818
GlaI GCGC 7 cut(s) 1415, 1417, 1678, 1984, 2327, 3137, 3598
GsuI CTGGAG 2 cut(s) 996, 3024
HaeII RGCGCY 1 cut(s) 3600
HaeIII GGCC 7 cut(s) 201, 596, 1289, 2347, 2712, 2824, 3563
HapII CCGG 8 cut(s) 33, 597, 1808, 2427, 2610, 2769, 2906, 3633
HgaI GACGC 2 cut(s) 2317, 2822
HhaI GCGC 7 cut(s) 1416, 1418, 1679, 1985, 2328, 3138, 3599
Hin1I GRCGYC 1 cut(s) 2833
Hin6I GCGC 7 cut(s) 1414, 1416, 1677, 1983, 2326, 3136, 3597
HinP1I GCGC 7 cut(s) 1414, 1416, 1677, 1983, 2326, 3136, 3597
HincII GTYRAC 1 cut(s) 698
HindII GTYRAC 1 cut(s) 698
HindIII AAGCTT 4 cut(s) 1518, 1577, 1745, 2116
HinfI GANTC 9 cut(s) 993, 1250, 1646, 1916, 2087, 2122, 2480, 3044, 3658
HpaII CCGG 8 cut(s) 33, 597, 1808, 2427, 2610, 2769, 2906, 3633
HphI GGTGA 7 cut(s) 218, 1016, 1825, 1858, 2230, 2920, 3529
Hpy166II GTNNAC 9 cut(s) 698, 1111, 1229, 1567, 1958, 2266, 2510, 2764, 3480
Hpy8I GTNNAC 9 cut(s) 698, 1111, 1229, 1567, 1958, 2266, 2510, 2764, 3480
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 7 cut(s) 45, 426, 478, 850, 904, 1634, 3550
HpyCH4IV ACGT 4 cut(s) 1107, 1407, 2817, 3582
HpySE526I ACGT 4 cut(s) 1107, 1407, 2817, 3582
Hsp92I GRCGYC 1 cut(s) 2833
HspAI GCGC 7 cut(s) 1414, 1416, 1677, 1983, 2326, 3136, 3597
KpnI GGTACC 1 cut(s) 3505
LguI GCTCTTC 1 cut(s) 1784
LmnI GCTCC 6 cut(s) 1327, 1821, 1988, 3224, 3417, 3705
LweI GCATC 7 cut(s) 104, 232, 746, 805, 875, 1626, 2707
MaeI CTAG 9 cut(s) 266, 788, 1341, 2411, 2666, 2714, 3600, 3654, 3818
MaeII ACGT 4 cut(s) 1107, 1407, 2817, 3582
MfeI CAATTG 3 cut(s) 956, 2733, 3255
MflI RGATCY 6 cut(s) 613, 832, 1824, 2578, 3241, 3739
MhlI GDGCHC 4 cut(s) 412, 2466, 3032, 3414
MlyI GAGTC 3 cut(s) 1002, 1259, 2116
MmeI TCCRAC 7 cut(s) 85, 313, 379, 748, 1609, 2556, 2901
Mph1103I ATGCAT 3 cut(s) 1966, 3101, 3391
MroXI GAANNNNTTC 4 cut(s) 55, 1233, 3370, 3626
MspA1I CMGCKG 2 cut(s) 15, 386
MspCI CTTAAG 1 cut(s) 311
MspI CCGG 8 cut(s) 33, 597, 1808, 2427, 2610, 2769, 2906, 3633
MspR9I CCNGG 4 cut(s) 2033, 2349, 2610, 3634
MunI CAATTG 3 cut(s) 956, 2733, 3255
Mva1269I GAATGC 2 cut(s) 1130, 1391
MvaI CCWGG 2 cut(s) 2033, 2349
MvnI CGCG 3 cut(s) 1416, 1644, 2328
NciI CCSGG 2 cut(s) 2610, 3634
NcoI CCATGG 1 cut(s) 1790
NdeI CATATG 1 cut(s) 1798
NheI GCTAGC 1 cut(s) 1340
NlaIV GGNNCC 8 cut(s) 555, 1222, 1817, 2465, 2580, 3212, 3220, 3503
NmeAIII GCCGAG 1 cut(s) 304
NmuCI GTSAC 8 cut(s) 17, 35, 634, 892, 994, 1306, 2926, 3484
NsiI ATGCAT 3 cut(s) 1966, 3101, 3391
NspI RCATGY 7 cut(s) 658, 1235, 1964, 2008, 2272, 2537, 3693
NspV TTCGAA 1 cut(s) 1627
PaeI GCATGC 1 cut(s) 658
PagI TCATGA 2 cut(s) 289, 1545
PauI GCGCGC 1 cut(s) 1414
PciI ACATGT 2 cut(s) 1231, 2533
PciSI GCTCTTC 1 cut(s) 1784
PcsI WCGNNNNNNNCGW 1 cut(s) 1951
PctI GAATGC 2 cut(s) 1130, 1391
PdmI GAANNNNTTC 4 cut(s) 55, 1233, 3370, 3626
PfeI GAWTC 6 cut(s) 1646, 1916, 2087, 2480, 3044, 3658
PflMI CCANNNNNTGG 1 cut(s) 2708
PinAI ACCGGT 1 cut(s) 2426
PleI GAGTC 3 cut(s) 1001, 1258, 2116
PpsI GAGTC 3 cut(s) 1001, 1258, 2116
Ppu21I YACGTR 1 cut(s) 1408
PpuMI RGGWCCY 4 cut(s) 554, 1220, 3052, 3211
PscI ACATGT 2 cut(s) 1231, 2533
PshBI ATTAAT 1 cut(s) 1656
PsiI TTATAA 3 cut(s) 1761, 2901, 2979
Psp124BI GAGCTC 1 cut(s) 3414
Psp5II RGGWCCY 4 cut(s) 554, 1220, 3052, 3211
Psp6I CCWGG 2 cut(s) 2031, 2347
PspGI CCWGG 2 cut(s) 2031, 2347
PspN4I GGNNCC 8 cut(s) 555, 1222, 1817, 2465, 2580, 3212, 3220, 3503
PspPI GGNCC 7 cut(s) 554, 770, 1019, 1220, 2822, 3052, 3211
PspPPI RGGWCCY 4 cut(s) 554, 1220, 3052, 3211
PstI CTGCAG 1 cut(s) 1149
PstNI CAGNNNCTG 1 cut(s) 3244
PsuI RGATCY 6 cut(s) 613, 832, 1824, 2578, 3241, 3739
PteI GCGCGC 1 cut(s) 1414
PvuII CAGCTG 2 cut(s) 15, 386
RsaI GTAC 8 cut(s) 1957, 2185, 2409, 2858, 3503, 3533, 3680, 3855
RsaNI GTAC 8 cut(s) 1956, 2184, 2408, 2857, 3502, 3532, 3679, 3854
SacI GAGCTC 1 cut(s) 3414
SapI GCTCTTC 1 cut(s) 1784
Sau96I GGNCC 7 cut(s) 554, 770, 1019, 1220, 2822, 3052, 3211
ScaI AGTACT 3 cut(s) 2185, 2858, 3855
SchI GAGTC 3 cut(s) 1002, 1259, 2116
ScrFI CCNGG 4 cut(s) 2033, 2349, 2610, 3634
SduI GDGCHC 4 cut(s) 412, 2466, 3032, 3414
SfaNI GCATC 7 cut(s) 104, 232, 746, 805, 875, 1626, 2707
SfcI CTRYAG 2 cut(s) 1145, 1737
SfuI TTCGAA 1 cut(s) 1627
SinI GGWCC 6 cut(s) 554, 770, 1019, 1220, 3052, 3211
SmlI CTYRAG 8 cut(s) 195, 230, 311, 617, 1528, 1820, 2091, 3755
SmoI CTYRAG 8 cut(s) 195, 230, 311, 617, 1528, 1820, 2091, 3755
SpeI ACTAGT 1 cut(s) 2665
SphI GCATGC 1 cut(s) 658
SsiI CCGC 3 cut(s) 1642, 2165, 2379
SspI AATATT 1 cut(s) 1596
SspMI CTAG 9 cut(s) 266, 788, 1341, 2411, 2666, 2714, 3600, 3654, 3818
SstI GAGCTC 1 cut(s) 3414
StyD4I CCNGG 4 cut(s) 2031, 2347, 2608, 3632
StyI CCWWGG 8 cut(s) 738, 760, 942, 1120, 1692, 1790, 2290, 3214
TaiI ACGT 4 cut(s) 1110, 1410, 2820, 3585
TaqI TCGA 9 cut(s) 216, 258, 366, 1052, 1239, 1627, 1730, 2550, 3330
TatI WGTACW 5 cut(s) 2183, 2407, 2856, 3531, 3853
TfiI GAWTC 6 cut(s) 1646, 1916, 2087, 2480, 3044, 3658
TscAI CASTG 4 cut(s) 520, 1623, 1758, 2338
TseFI GTSAC 8 cut(s) 17, 35, 634, 892, 994, 1306, 2926, 3484
Tsp45I GTSAC 8 cut(s) 17, 35, 634, 892, 994, 1306, 2926, 3484
TspGWI ACGGA 1 cut(s) 2571
TspRI CASTG 4 cut(s) 520, 1623, 1758, 2338
Van91I CCANNNNNTGG 1 cut(s) 2708
Vha464I CTTAAG 1 cut(s) 311
VpaK11BI GGWCC 6 cut(s) 554, 770, 1019, 1220, 3052, 3211
VspI ATTAAT 1 cut(s) 1656
XceI RCATGY 7 cut(s) 658, 1235, 1964, 2008, 2272, 2537, 3693
XcmI CCANNNNNNNNNTGG 2 cut(s) 583, 2689
XmnI GAANNNNTTC 4 cut(s) 55, 1233, 3370, 3626
XspI CTAG 9 cut(s) 266, 788, 1341, 2411, 2666, 2714, 3600, 3654, 3818
ZrmI AGTACT 3 cut(s) 2185, 2858, 3855
Zsp2I ATGCAT 3 cut(s) 1966, 3101, 3391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.