pycom10g15080
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
18400609 .. 18407161
6553 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g15080.2

Sequence Viewer

Length: 4305 bp
ATGGAGATCAGTTGTGATATTCAGAAAGCTGGCCACAGTTTTAGACGAAGTGGTTCTTCCTTCTGGATTGACAATGGCAGCGGAGTTTTCTCAACGTCTTCGCACGGAGAGGACGATGAGGAAGCTCTCAAATGGGCTGCCCTTCAGAGACTTCCAACGTTTCAGCGCTTGAAGAAAGGCCTGCTCGCTACTCCTCAAGGGGAGACCAACGAAGTTGACGTGAGCAATCTTGAAGTGAAAGAAAGGAAGAATTTGATCGAGCGGTTAGTTGGAGTAGCCGAGGAGGATCATGAGAACTTCTTGTTGAGACTCAAGAACCGCATTGATAGAGTTGGAATTAATCTTCCGAAAATTGAGGTTAGATTCCAGCATTTGAAAATTGCAGCCGAAGCTTATGCAGGAAGCAGGGCTCTGCCTACAGTTTTTAATTACTGTGTCAATTTAGTGGAGGGTTTGTTGAACTCCGTTCATATTCTTCCTAGCAAGAAAAAGCACTTGTCTATCCTCAAAGATGTTAGTGGGATCGTTAGGCCTTGCAGAATGACACTGCTTTTGGGTCCTCCGAGTTCCGGAAAGACCACTCTCCTGTTGGCTTTGGCTGGAGAGCTTGACCGGGATCTTCAGTTTTCAGGACGTGTGACCTACAATGGTCACGGCATGCATGAGTTTGTGCCTCAGAGGACTGCTGCCTATATCAGCCAACATGATGTTCATATGGGAGAATTGACAGTCGGAGAAACATTGAACTTCTCTGCAAGATGCCAAGGGGTCGGAGACCGTTATGAGATCCTAGTCGAGTTAAGTAGACGAGAGAAAGAAGCGAATATTAAGCCGGATGCAGACATAGATATCTACATGAAGGCGGTGGCATCAGAAGGCCAGAGGGTACAAGTGGTGACAGATTATACACTAAAGATTTTGGGATTAGATGGATGTGCAGATACCTTGGTGGGGGATAACTTGATAAGGGGCATCTCCGGCGGACAAAAGAAACGACTCACAACTGGTGAGATGTTGGTTGGACCGGCTAAGGCATTGTTCATGGACGAAATATCTACGGGTTTGGATAGCTCAACAACATATCAAATCGTGAATTCGATCAAGCAATATGTTCACATTCTCAATGGGACTGCATTCATCTCACTGCTGCAACCAGCACCTGAGACTTATGAACTATTTGATGACATTGTTCTCCTTTCTGATGGTCACATCGTGTACCAAGGTCCTCGTGAAAATGTTCTTGAATTTTTCGAATCCATGGGGTTCAGATGTCCTGAGAGGAAAGGCGTGGCGGACTTCCTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAGTATTGGGCAAGCAGAGATGAGCCTTACAGGTTCATCACGGTCGAAGAATTTGTCGAGGCATTCCAATCATTTCACATCGGGCGCAAACTTAGAGATGAACTCGCAACTCCATTTGACAAGGCCAAGAGCCACCCAGCTGCATTAACAACAAAAAGATATGGCGTTAGTAAAACTGAACTGTTGAAAGCTTGCTTTGCGAGGGAGTTCTTGCTCATGAAGAGGAACTCATTTGTCTACCTTTTCAAGCTTGCCCAACTCTCAATCTTGGCTATGATTACAATGACATTGTTCCTACGAACTGAGATGCATCGCAATTCAGTAGATGACGGGGTAATTTATGCTGGTGCTTTGTTCTTCTCCCTGGTTGCTGTTATGTTCAATGGACTGGCAGAGCTTTCGATGACTGTTACAAAGCTCCCTGTATTTTATAAGCAGAGAAACCTCCTCTTCTTTCCGCCGTGGACATATACCCTTCCCTCGTGGATCCTAAAGATCCCTATCACCTGTGTTGAAGTTGTGGTTTGGGTATTTATGACCTATTATGTCATCGGATATATCGATCCAAATGTCGGAAGGTTGTTTAAGCAATGGCTTCTACTCCTACTCATTAATCAGATGGCTTCGGGGTTGTTCCGATTCATTGCTGGAGTTGGTAGAAGCATGACTATTGCAAGCACATTCGGATCATTTGCACTTGTCATGCTTTTCTCCTTGGGTGGTTTTGTTCTGTCAAGAGTCGATATAAAGAAATGGTGGATGTGGGGCTACTGGATATCACCTTTGATGTACGGACAGAATGCAATAGTAGTCAATGAGTTCCTCGGAAAGAGTTGGAGACATATTCTACCAAACTCAACGGAACCATTAGGAGTCGCTGTTCTGAAGTCACGCGGATTCTTCACAGCGCCTCGTTGGTATTGGATTGGCGCGGGAGTATTGGCTGGATACGTGCTTATATTCAACTTATTTTTCACTTTGGCTCTCACTTATCTAAAGCCAATTGGGAAGCCACAGGCTGTTAAGTTGGAAGATCCTATCTCGACTCCTCAAATTAGTAGAGAAAATGGAAATGGAAGTAACTCCTCCAGGTCTTGCTCAATTACAAAAGAAGCTACTAATGACGCAAATGGTAACAAGAAAAGAGGAATGGTTCTTCCGTTCGAACCACATTCCATCACCTTTGATGAAATCACATACTCCGTGGACATGCCACAGGAAATGAAGAATCAAGGTGTTCCCGAGGATAAACTGGTGCTCATTAGGCGTGTGAGTGGTGCTTTTAGGCCTGGTGTTTTGACAGCTCTAATGGGAGTGAGTGGGGCTGGTAAAACAACTCTAATGGACGTACTAGCCGGTAGAAAAACTGGAGGATATATTGAGGGAAATATCACAATTTCCGGGTACCCAAAAAAGCAGGAATCGTTTGCCCGGATTTCTGGATATTGTGAGCAGAATGACATCCACTCTCCTCATGTTACTGTCTATGAATCCTTGATGTACTCAGCATGGCTGCGTTTATCTTCAGAAATCGATTCTGAAACCAGGAAGATGTTCGTTGAGGAAGTTATGGGACTTGTGGAGCTAAATCCGTTGAGGCAAGCACTAGTAGGGTTGCCTGGTGCGAGCGGTCTTTCAACTGAGCAGCGTAAGAGGCTGACCATTGCGGTTGAACTGGTGGCTAACCCCTCCATAATATTCATGGATGAACCGACTTCAGGCTTGGATGCAAGAGCTGCAGCCATTGTTATGCGAGCAGTCAGGAACACCGTGGACACTGGAAGAACAGTCGTCTGCACCATCCATCAGCCAAGCATTGACATATTTGATGCTTTCGATGAGCTATTCCTACTGAAGAAAGGAGGACAAGAGCTCTATGTAGGACCATTAGGCCGCCATTCTTGCAATTTGATCAAGTACTTTGAGGGGATCGATAACATCAGTAAAATTAGGGATGGCTACAATCCAGCAACATGGATGTTGGAAGTCACTTCGTCAGCCAAAGAAATAGCTATGGAGATTGATTTTGCTGAAGTGTATAAGAAATCAGAACTGTACAGGAGAAACAAAGCACTTATTGCAGAACTAAGCAACCCTGCTTCTGGTTCTAAGGATCTTCATTTTCCTACTCAATACTCTCAGCCCTTTTTATCCCAATGCGTAGCTTGCTTATGGAAACAACATTGGTCCTATTGGCGCAATCCGCCATACACGGCCATCAGGTTGATCTACACAACCATCGTAGCATTGATGTTCGGGACAATGTTCTGGAACCTTGGCTCCAAAACAACGAAAGAAAAGGATCTCTTCAATGCAATTGGTTCAATGTACGCTGCTGTTCTCTTTCTCGGTATCAAAAATTCCACAACGGTGCAGCCTGTTGTGGACGTCGAAAGAACAGTCTTCTACAGAGAACGAGCTGCTGGAATGTATTCTGCCTTGGCATACGCCTTTGCACAGGTTACAATTGAGATCCCTTATGTTTTTGTACAAGCCCTTGTCTATAGTGTCATAGTTTACGCAATGATCGGGTTTGAATGGACTCTGGCTAAATTCTTGTGGTACTTATTCTTCATGTATTTCACATTTTTGTACTTCACCTACTATGGCATGATGGGAGTGGCCTTGACGCCGAACCAACACATAGCCGCTATAAATTCCAGCGCATTTTACGCAATATGGAATGTCTTCTCGGGGTTCATAATCCCACGGACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGCGTGTCCGATGGCCTGGACCTTGTACGGACTGGCTACATCGCAGTTTGGAGATATACAGGACGAGCTCGAGACGGGTGCAACAGTGGAAGAATTCATGAGGCAGTACTTCGGTTTCAAGCAAGAATTTATCGGAGTGGTTGCAGCTGTGGTTGTTGGATTCGCTCTACTCTTTGCACTTATCTTTGCCTTGTCCATCAAGATGTTGAGTTTCCAGAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1435

Amino Acids

161.73

Weight (kDa)

8.47

Isoelectric Point (pI)

36.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1764
AatII GACGTC 1 cut(s) 3723
Acc65I GGTACC 1 cut(s) 2736
AccB1I GGYRCC 1 cut(s) 2736
AccBSI CCGCTC 2 cut(s) 262, 2961
AccI GTMKAC 2 cut(s) 805, 1569
AccII CGCG 2 cut(s) 2226, 2264
AccIII TCCGGA 1 cut(s) 569
AclI AACGTT 1 cut(s) 158
AcoI YGGCCR 2 cut(s) 31, 3546
AcsI RAATTY 9 cut(s) 250, 1093, 1244, 1382, 3691, 3884, 3988, 4172, 4205
AcuI CTGAAG 7 cut(s) 128, 605, 2237, 2841, 3033, 3206, 3384
AcyI GRCGYC 2 cut(s) 3720, 3962
AdeI CACNNNGTG 1 cut(s) 1213
AfeI AGCGCT 1 cut(s) 167
AfiI CCNNNNNNNGG 5 cut(s) 569, 951, 1904, 3050, 3434
AflIII ACRYGT 1 cut(s) 634
AhlI ACTAGT 1 cut(s) 2938
AjiI CACGTC 2 cut(s) 220, 635
AjnI CCWGG 6 cut(s) 1695, 2420, 2620, 2876, 2950, 4094
AjuI GAANNNNNNNTTGG 2 cut(s) 693, 725
AleI CACNNNNGTG 1 cut(s) 3701
AloI GAACNNNNNNTCC 4 cut(s) 2196, 2228, 3596, 3628
Alw21I GWGCWC 3 cut(s) 2592, 3207, 4149
Alw26I GTCTC 7 cut(s) 142, 197, 301, 768, 1157, 2164, 4145
AlwNI CAGNNNCTG 1 cut(s) 1160
Ama87I CYCGRG 3 cut(s) 2573, 4024, 4148
Aor13HI TCCGGA 1 cut(s) 569
Aor51HI AGCGCT 1 cut(s) 167
ApoI RAATTY 9 cut(s) 250, 1093, 1244, 1382, 3691, 3884, 3988, 4172, 4205
ArsI GACNNNNNNTTYG 6 cut(s) 535, 567, 1371, 1403, 3717, 3749
AseI ATTAAT 2 cut(s) 339, 1944
Asp700I GAANNNNTTC 5 cut(s) 52, 1236, 2885, 3763, 4019
Asp718I GGTACC 1 cut(s) 2736
AspLEI GCGC 6 cut(s) 168, 1419, 2242, 2264, 3531, 3998
AspS9I GGNCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
AsuC2I CCSGG 3 cut(s) 614, 2734, 2764
AsuHPI GGTGA 6 cut(s) 907, 1019, 1828, 2103, 2503, 3922
AsuII TTCGAA 2 cut(s) 1251, 2496
AvaI CYCGRG 3 cut(s) 2573, 4024, 4148
AvaII GGWCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
BaeI ACNNNNGTAYC 2 cut(s) 933, 966
BalI TGGCCA 1 cut(s) 33
BamHI GGATCC 1 cut(s) 1818
BanI GGYRCC 1 cut(s) 2736
BanII GRGCYC 3 cut(s) 412, 3207, 4149
BarI GAAGNNNNNNTAC 2 cut(s) 3887, 3919
BauI CACGAG 2 cut(s) 1227, 1813
BbsI GAAGAC 3 cut(s) 90, 3727, 4012
Bbv12I GWGCWC 3 cut(s) 2592, 3207, 4149
BceAI ACGGC 3 cut(s) 670, 1777, 3561
BcgI CGANNNNNNTGC 6 cut(s) 377, 411, 1713, 1747, 4139, 4173
BciT130I CCWGG 6 cut(s) 1697, 2422, 2622, 2878, 2952, 4096
BciVI GTATCC 1 cut(s) 2273
BclI TGATCA 1 cut(s) 3243
BcnI CCSGG 3 cut(s) 614, 2734, 2764
BcoDI GTCTC 7 cut(s) 142, 197, 301, 768, 1157, 2164, 4145
BcuI ACTAGT 1 cut(s) 2938
BfaI CTAG 5 cut(s) 480, 791, 2684, 2939, 4047
BfmI CTRYAG 4 cut(s) 417, 3069, 3739, 3835
BfoI RGCGCY 2 cut(s) 169, 2243
BfuI GTATCC 1 cut(s) 2273
BmcAI AGTACT 2 cut(s) 3251, 4187
Bme1390I CCNGG 9 cut(s) 614, 1697, 2422, 2622, 2734, 2764, 2878, 2952, 4096
Bme18I GGWCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
BmeT110I CYCGRG 3 cut(s) 2573, 4024, 4148
BmgBI CACGTC 2 cut(s) 220, 635
BmgT120I GGNCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
BmiI GGNNCC 6 cut(s) 558, 1820, 2196, 2738, 3605, 3613
BmrFI CCNGG 9 cut(s) 614, 1697, 2422, 2622, 2734, 2764, 2878, 2952, 4096
BmsI GCATC 8 cut(s) 749, 826, 878, 981, 1629, 1651, 3049, 3151
BpiI GAAGAC 3 cut(s) 90, 3727, 4012
BplI GAGNNNNNCTC 2 cut(s) 1419, 1451
BpmI CTGGAG 4 cut(s) 621, 2001, 2404, 2721
Bpu10I CCTNAGC 1 cut(s) 1029
Bpu14I TTCGAA 2 cut(s) 1251, 2496
BpuEI CTTGAG 2 cut(s) 180, 296
BpuMI CCSGG 3 cut(s) 614, 2734, 2764
Bsa29I ATCGAT 3 cut(s) 1893, 2865, 3264
BsaAI YACGTR 1 cut(s) 2284
BsaBI GATNNNNATC 1 cut(s) 1832
BsaHI GRCGYC 2 cut(s) 3720, 3962
BsaI GGTCTC 2 cut(s) 197, 768
BsaWI WCCGGW 1 cut(s) 569
BsaXI ACNNNNNCTCC 6 cut(s) 440, 470, 2196, 2226, 3596, 3626
Bsc4I CCNNNNNNNGG 5 cut(s) 569, 951, 1904, 3050, 3434
Bse118I RCCGGY 2 cut(s) 1024, 2687
Bse1I ACTGG 8 cut(s) 1009, 1725, 2108, 2589, 2704, 3012, 3115, 4116
Bse3DI GCAATG 4 cut(s) 1928, 1974, 2994, 3861
Bse8I GATNNNNATC 1 cut(s) 1832
BseAI TCCGGA 1 cut(s) 569
BseBI CCWGG 6 cut(s) 1697, 2422, 2622, 2878, 2952, 4096
BseCI ATCGAT 3 cut(s) 1893, 2865, 3264
BseGI GGATG 9 cut(s) 841, 938, 2097, 2793, 3043, 3064, 3132, 3292, 3315
BseJI GATNNNNATC 1 cut(s) 1832
BseLI CCNNNNNNNGG 5 cut(s) 569, 951, 1904, 3050, 3434
BseMI GCAATG 4 cut(s) 1928, 1974, 2994, 3861
BseMII CTCAG 7 cut(s) 689, 1152, 1266, 1626, 2850, 2964, 3485
BseNI ACTGG 8 cut(s) 1009, 1725, 2108, 2589, 2704, 3012, 3115, 4116
BseRI GAGGAG 6 cut(s) 183, 296, 1769, 2370, 2407, 2793
BseYI CCCAGC 1 cut(s) 1468
BsgI GTGCAG 3 cut(s) 957, 3112, 3725
Bsh1236I CGCG 2 cut(s) 2226, 2264
Bsh1285I CGRYCG 1 cut(s) 1377
BshNI GGYRCC 1 cut(s) 2736
BshVI ATCGAT 3 cut(s) 1893, 2865, 3264
BsiEI CGRYCG 1 cut(s) 1377
BsiHKAI GWGCWC 3 cut(s) 2592, 3207, 4149
BsiHKCI CYCGRG 3 cut(s) 2573, 4024, 4148
BsiSI CCGG 8 cut(s) 570, 613, 833, 978, 1025, 2688, 2733, 2764
BslFI GGGAC 3 cut(s) 1141, 2919, 3604
BslI CCNNNNNNNGG 5 cut(s) 569, 951, 1904, 3050, 3434
BsmAI GTCTC 7 cut(s) 142, 197, 301, 768, 1157, 2164, 4145
BsmBI CGTCTC 1 cut(s) 4145
BsmFI GGGAC 3 cut(s) 1141, 2919, 3604
BsmI GAATGC 3 cut(s) 1133, 1394, 2137
Bso31I GGTCTC 2 cut(s) 197, 768
BsoBI CYCGRG 3 cut(s) 2573, 4024, 4148
Bsp119I TTCGAA 2 cut(s) 1251, 2496
Bsp1286I GDGCHC 4 cut(s) 412, 2592, 3207, 4149
Bsp13I TCCGGA 1 cut(s) 569
Bsp1407I TGTACA 2 cut(s) 3387, 3820
Bsp19I CCATGG 1 cut(s) 1257
BspCNI CTCAG 7 cut(s) 688, 1153, 1267, 1627, 2849, 2965, 3484
BspDI ATCGAT 3 cut(s) 1893, 2865, 3264
BspEI TCCGGA 1 cut(s) 569
BspFNI CGCG 2 cut(s) 2226, 2264
BspHI TCATGA 3 cut(s) 289, 1548, 4176
BspLI GGNNCC 6 cut(s) 558, 1820, 2196, 2738, 3605, 3613
BspMAI CTGCAG 1 cut(s) 3073
BspT104I TTCGAA 2 cut(s) 1251, 2496
BspT107I GGYRCC 1 cut(s) 2736
BspTNI GGTCTC 2 cut(s) 197, 768
BsrBI CCGCTC 2 cut(s) 262, 2961
BsrDI GCAATG 4 cut(s) 1928, 1974, 2994, 3861
BsrFI RCCGGY 2 cut(s) 1024, 2687
BsrGI TGTACA 2 cut(s) 3387, 3820
BsrI ACTGG 8 cut(s) 1009, 1725, 2108, 2589, 2704, 3012, 3115, 4116
BssAI RCCGGY 2 cut(s) 1024, 2687
BssNI GRCGYC 2 cut(s) 3720, 3962
BssSI CACGAG 2 cut(s) 1227, 1813
BssT1I CCWWGG 7 cut(s) 763, 945, 1219, 1257, 2046, 3607, 3771
Bst2BI CACGAG 2 cut(s) 1227, 1813
Bst2UI CCWGG 6 cut(s) 1697, 2422, 2622, 2878, 2952, 4096
Bst6I CTCTTC 3 cut(s) 1547, 1787, 3644
BstACI GRCGYC 2 cut(s) 3720, 3962
BstAPI GCANNNNNTGC 2 cut(s) 3068, 3410
BstAUI TGTACA 2 cut(s) 3387, 3820
BstBAI YACGTR 1 cut(s) 2284
BstBI TTCGAA 2 cut(s) 1251, 2496
BstDSI CCRYGG 5 cut(s) 1257, 1793, 2535, 3102, 4040
BstF5I GGATG 9 cut(s) 841, 938, 2097, 2793, 3043, 3064, 3132, 3292, 3315
BstFNI CGCG 2 cut(s) 2226, 2264
BstH2I RGCGCY 2 cut(s) 169, 2243
BstHHI GCGC 6 cut(s) 168, 1419, 2242, 2264, 3531, 3998
BstMAI GTCTC 7 cut(s) 142, 197, 301, 768, 1157, 2164, 4145
BstMCI CGRYCG 1 cut(s) 1377
BstNI CCWGG 6 cut(s) 1697, 2422, 2622, 2878, 2952, 4096
BstNSI RCATGY 2 cut(s) 661, 2545
BstSCI CCNGG 9 cut(s) 612, 1695, 2420, 2620, 2732, 2762, 2876, 2950, 4094
BstSFI CTRYAG 4 cut(s) 417, 3069, 3739, 3835
BstUI CGCG 2 cut(s) 2226, 2264
BstV2I GAAGAC 3 cut(s) 90, 3727, 4012
BstX2I RGATCY 8 cut(s) 616, 786, 1818, 1827, 2365, 3445, 3634, 3804
BstXI CCANNNNNNTGG 1 cut(s) 3306
BstYI RGATCY 8 cut(s) 616, 786, 1818, 1827, 2365, 3445, 3634, 3804
Bsu15I ATCGAT 3 cut(s) 1893, 2865, 3264
BsuI GTATCC 1 cut(s) 2273
BsuTUI ATCGAT 3 cut(s) 1893, 2865, 3264
BtgI CCRYGG 5 cut(s) 1257, 1793, 2535, 3102, 4040
BtgZI GCGATG 2 cut(s) 1628, 4104
BtrI CACGTC 2 cut(s) 220, 635
BtsCI GGATG 9 cut(s) 841, 938, 2097, 2793, 3043, 3064, 3132, 3292, 3315
BtsI GCAGTG 2 cut(s) 545, 1142
BtsIMutI CAGTG 4 cut(s) 545, 1142, 3108, 4170
CaiI CAGNNNCTG 1 cut(s) 1160
CciI TCATGA 3 cut(s) 289, 1548, 4176
CfoI GCGC 6 cut(s) 168, 1419, 2242, 2264, 3531, 3998
Cfr10I RCCGGY 2 cut(s) 1024, 2687
Cfr13I GGNCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
ClaI ATCGAT 3 cut(s) 1893, 2865, 3264
CseI GACGC 2 cut(s) 2465, 3970
DraIII CACNNNGTG 1 cut(s) 1213
EaeI YGGCCR 2 cut(s) 31, 3546
Eam1104I CTCTTC 3 cut(s) 1547, 1787, 3644
EarI CTCTTC 3 cut(s) 1547, 1787, 3644
EciI GGCGGA 4 cut(s) 996, 1307, 1779, 3525
Ecl136II GAGCTC 2 cut(s) 3205, 4147
Eco130I CCWWGG 7 cut(s) 763, 945, 1219, 1257, 2046, 3607, 3771
Eco147I AGGCCT 3 cut(s) 180, 532, 2620
Eco24I GRGCYC 3 cut(s) 412, 3207, 4149
Eco31I GGTCTC 2 cut(s) 197, 768
Eco32I GATATC 2 cut(s) 850, 2109
Eco47I GGWCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
Eco47III AGCGCT 1 cut(s) 167
Eco53kI GAGCTC 2 cut(s) 3205, 4147
Eco57I CTGAAG 7 cut(s) 128, 605, 2237, 2841, 3033, 3206, 3384
Eco88I CYCGRG 3 cut(s) 2573, 4024, 4148
EcoICRI GAGCTC 2 cut(s) 3205, 4147
EcoO109I RGGNCCY 2 cut(s) 557, 1223
EcoRI GAATTC 2 cut(s) 1093, 4172
EcoRII CCWGG 6 cut(s) 1695, 2420, 2620, 2876, 2950, 4094
EcoRV GATATC 2 cut(s) 850, 2109
EcoT14I CCWWGG 7 cut(s) 763, 945, 1219, 1257, 2046, 3607, 3771
EcoT22I ATGCAT 2 cut(s) 663, 1644
EcoT38I GRGCYC 3 cut(s) 412, 3207, 4149
ErhI CCWWGG 7 cut(s) 763, 945, 1219, 1257, 2046, 3607, 3771
Esp3I CGTCTC 1 cut(s) 4145
FalI AAGNNNNNCTT 4 cut(s) 40, 72, 3623, 3655
FaqI GGGAC 3 cut(s) 1141, 2919, 3604
FauI CCCGC 1 cut(s) 2257
FauNDI CATATG 1 cut(s) 714
FbaI TGATCA 1 cut(s) 3243
FblI GTMKAC 2 cut(s) 805, 1569
FokI GGATG 9 cut(s) 848, 945, 2104, 2780, 3050, 3071, 3119, 3299, 3322
FriOI GRGCYC 3 cut(s) 412, 3207, 4149
FspBI CTAG 5 cut(s) 480, 791, 2684, 2939, 4047
GlaI GCGC 6 cut(s) 167, 1418, 2241, 2263, 3530, 3997
GsaI CCCAGC 1 cut(s) 1472
GsuI CTGGAG 4 cut(s) 621, 2001, 2404, 2721
HaeII RGCGCY 2 cut(s) 169, 2243
HapII CCGG 8 cut(s) 570, 613, 833, 978, 1025, 2688, 2733, 2764
HgaI GACGC 2 cut(s) 2465, 3970
HhaI GCGC 6 cut(s) 168, 1419, 2242, 2264, 3531, 3998
Hin1I GRCGYC 2 cut(s) 3720, 3962
Hin6I GCGC 6 cut(s) 166, 1417, 2240, 2262, 3529, 3996
HinP1I GCGC 6 cut(s) 166, 1417, 2240, 2262, 3529, 3996
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HindIII AAGCTT 3 cut(s) 390, 1521, 1580
HpaII CCGG 8 cut(s) 570, 613, 833, 978, 1025, 2688, 2733, 2764
HphI GGTGA 6 cut(s) 907, 1019, 1828, 2103, 2503, 3922
Hpy99I CGWCG 1 cut(s) 3725
HpyAV CCTTC 6 cut(s) 70, 152, 853, 869, 1817, 1902
HpyCH4IV ACGT 7 cut(s) 95, 158, 219, 634, 2283, 2679, 3720
HpySE526I ACGT 7 cut(s) 95, 158, 219, 634, 2283, 2679, 3720
Hsp92I GRCGYC 2 cut(s) 3720, 3962
HspAI GCGC 6 cut(s) 166, 1417, 2240, 2262, 3529, 3996
Kpn2I TCCGGA 1 cut(s) 569
KpnI GGTACC 1 cut(s) 2740
Ksp22I TGATCA 1 cut(s) 3243
LmnI GCTCC 4 cut(s) 1330, 1755, 2914, 3617
LweI GCATC 8 cut(s) 749, 826, 878, 981, 1629, 1651, 3049, 3151
MaeI CTAG 5 cut(s) 480, 791, 2684, 2939, 4047
MaeII ACGT 7 cut(s) 95, 158, 219, 634, 2283, 2679, 3720
MbiI CCGCTC 2 cut(s) 262, 2961
MfeI CAATTG 3 cut(s) 2334, 3648, 3798
MflI RGATCY 8 cut(s) 616, 786, 1818, 1827, 2365, 3445, 3634, 3804
MhlI GDGCHC 4 cut(s) 412, 2592, 3207, 4149
MlsI TGGCCA 1 cut(s) 33
MluNI TGGCCA 1 cut(s) 33
MlyI GAGTC 6 cut(s) 303, 990, 2079, 2214, 2371, 3868
Mox20I TGGCCA 1 cut(s) 33
Mph1103I ATGCAT 2 cut(s) 663, 1644
MroI TCCGGA 1 cut(s) 569
MroXI GAANNNNTTC 5 cut(s) 52, 1236, 2885, 3763, 4019
MscI TGGCCA 1 cut(s) 33
MseI TTAA 8 cut(s) 339, 426, 800, 828, 1478, 1917, 1944, 2355
MslI CAYNNNNRTG 3 cut(s) 3080, 3701, 4280
Msp20I TGGCCA 1 cut(s) 33
MspA1I CMGCKG 3 cut(s) 81, 1472, 4226
MspI CCGG 8 cut(s) 570, 613, 833, 978, 1025, 2688, 2733, 2764
MspR9I CCNGG 9 cut(s) 614, 1697, 2422, 2622, 2734, 2764, 2878, 2952, 4096
MunI CAATTG 3 cut(s) 2334, 3648, 3798
Mva1269I GAATGC 3 cut(s) 1133, 1394, 2137
MvaI CCWGG 6 cut(s) 1697, 2422, 2622, 2878, 2952, 4096
MvnI CGCG 2 cut(s) 2226, 2264
NciI CCSGG 3 cut(s) 614, 2734, 2764
NcoI CCATGG 1 cut(s) 1257
NdeI CATATG 1 cut(s) 714
NlaIV GGNNCC 6 cut(s) 558, 1820, 2196, 2738, 3605, 3613
NmeAIII GCCGAG 1 cut(s) 304
NmuCI GTSAC 7 cut(s) 637, 650, 895, 1205, 1309, 2220, 3319
NsiI ATGCAT 2 cut(s) 663, 1644
NspI RCATGY 2 cut(s) 661, 2545
NspV TTCGAA 2 cut(s) 1251, 2496
OliI CACNNNNGTG 1 cut(s) 3701
PaeI GCATGC 1 cut(s) 661
PaeR7I CTCGAG 1 cut(s) 4148
PagI TCATGA 3 cut(s) 289, 1548, 4176
PceI AGGCCT 3 cut(s) 180, 532, 2620
PcsI WCGNNNNNNNCGW 3 cut(s) 111, 216, 1890
PctI GAATGC 3 cut(s) 1133, 1394, 2137
PdmI GAANNNNTTC 5 cut(s) 52, 1236, 2885, 3763, 4019
PleI GAGTC 6 cut(s) 303, 990, 2078, 2213, 2371, 3868
PpsI GAGTC 6 cut(s) 303, 990, 2078, 2213, 2371, 3868
Ppu21I YACGTR 1 cut(s) 2284
PpuMI RGGWCCY 2 cut(s) 557, 1223
PshBI ATTAAT 2 cut(s) 339, 1944
PsiI TTATAA 1 cut(s) 1764
Psp124BI GAGCTC 2 cut(s) 3207, 4149
Psp1406I AACGTT 1 cut(s) 158
Psp5II RGGWCCY 2 cut(s) 557, 1223
Psp6I CCWGG 6 cut(s) 1695, 2420, 2620, 2876, 2950, 4094
PspFI CCCAGC 1 cut(s) 1468
PspGI CCWGG 6 cut(s) 1695, 2420, 2620, 2876, 2950, 4094
PspN4I GGNNCC 6 cut(s) 558, 1820, 2196, 2738, 3605, 3613
PspPI GGNCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
PspPPI RGGWCCY 2 cut(s) 557, 1223
PstI CTGCAG 1 cut(s) 3073
PstNI CAGNNNCTG 1 cut(s) 1160
PsuI RGATCY 8 cut(s) 616, 786, 1818, 1827, 2365, 3445, 3634, 3804
PvuII CAGCTG 2 cut(s) 1472, 4226
RseI CAYNNNNRTG 3 cut(s) 3080, 3701, 4280
SacI GAGCTC 2 cut(s) 3207, 4149
SaqAI TTAA 8 cut(s) 339, 426, 800, 828, 1478, 1917, 1944, 2355
Sau96I GGNCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
ScaI AGTACT 2 cut(s) 3251, 4187
SchI GAGTC 6 cut(s) 303, 990, 2079, 2214, 2371, 3868
ScrFI CCNGG 9 cut(s) 614, 1697, 2422, 2622, 2734, 2764, 2878, 2952, 4096
SduI GDGCHC 4 cut(s) 412, 2592, 3207, 4149
SfaNI GCATC 8 cut(s) 749, 826, 878, 981, 1629, 1651, 3049, 3151
SfcI CTRYAG 4 cut(s) 417, 3069, 3739, 3835
Sfr274I CTCGAG 1 cut(s) 4148
SfuI TTCGAA 2 cut(s) 1251, 2496
SinI GGWCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
SlaI CTCGAG 1 cut(s) 4148
SmiMI CAYNNNNRTG 3 cut(s) 3080, 3701, 4280
SmlI CTYRAG 3 cut(s) 195, 311, 4148
SmoI CTYRAG 3 cut(s) 195, 311, 4148
SpeI ACTAGT 1 cut(s) 2938
SphI GCATGC 1 cut(s) 661
SseBI AGGCCT 3 cut(s) 180, 532, 2620
SspI AATATT 2 cut(s) 826, 3030
SspMI CTAG 5 cut(s) 480, 791, 2684, 2939, 4047
SstI GAGCTC 2 cut(s) 3207, 4149
StuI AGGCCT 3 cut(s) 180, 532, 2620
StyD4I CCNGG 9 cut(s) 612, 1695, 2420, 2620, 2732, 2762, 2876, 2950, 4094
StyI CCWWGG 7 cut(s) 763, 945, 1219, 1257, 2046, 3607, 3771
TaiI ACGT 7 cut(s) 98, 161, 222, 637, 2286, 2682, 3723
TatI WGTACW 6 cut(s) 2832, 3249, 3387, 3820, 3924, 4185
TauI GCSGC 2 cut(s) 3228, 3983
Tru1I TTAA 8 cut(s) 339, 426, 800, 828, 1478, 1917, 1944, 2355
Tru9I TTAA 8 cut(s) 339, 426, 800, 828, 1478, 1917, 1944, 2355
TscAI CASTG 4 cut(s) 552, 1149, 3115, 4170
TseFI GTSAC 7 cut(s) 637, 650, 895, 1205, 1309, 2220, 3319
Tsp45I GTSAC 7 cut(s) 637, 650, 895, 1205, 1309, 2220, 3319
TspGWI ACGGA 9 cut(s) 120, 454, 2139, 2207, 2481, 2524, 2913, 4057, 4122
TspRI CASTG 4 cut(s) 552, 1149, 3115, 4170
VpaK11BI GGWCC 6 cut(s) 557, 1022, 1223, 3215, 3519, 4098
VspI ATTAAT 2 cut(s) 339, 1944
XapI RAATTY 9 cut(s) 250, 1093, 1244, 1382, 3691, 3884, 3988, 4172, 4205
XceI RCATGY 2 cut(s) 661, 2545
XcmI CCANNNNNNNNNTGG 2 cut(s) 586, 3031
XhoI CTCGAG 1 cut(s) 4148
XmiI GTMKAC 2 cut(s) 805, 1569
XmnI GAANNNNTTC 5 cut(s) 52, 1236, 2885, 3763, 4019
XspI CTAG 5 cut(s) 480, 791, 2684, 2939, 4047
ZraI GACGTC 1 cut(s) 3721
ZrmI AGTACT 2 cut(s) 3251, 4187
Zsp2I ATGCAT 2 cut(s) 663, 1644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.