Rroxscaffold_2G00107550
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
31500216 .. 31509329
9114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00107550.1

Sequence Viewer

Length: 4164 bp
ATGGACAGTGGTAATATCCAATTAGGCAGTTCCTCTATATGGAGGAACCATGGTAGTGTGGACGCTTTTTCGAGTTCTACACGCAGAGAAGACGATGAAGAAGCTCTCAAATGGGCTGCCCTAGAGAAGCTTCCCACTTATAATCGTCTGAGGAAAGGTATACTCACCTCGGGCAGTGGAAAAGCTAATGAAATTGATATACCAAATCTTGGTTTTGAAGAGAAAAAGGACTTGGTTGAAAGGTTGCTTAAAGGCACTGAAGACGGCAACGAAAAGTTTGTATTGAAGCTCAAGAATCGTATTGATAGAGTTGGAATTGATCTTCCCACAATTGAAGTTCGATTTGAGCATCTAAATATAGAAGCAGAAGCTTATGTAGGAAGCCGAGCTTTGCCTACTCTCGTAAACTGGACTGCTAACATAATCCAGGGATTCTTGACCAATCTCAGCATACTTTCAAGTAGCAAGACAAACGTCTCTATCCTTAACAATGTTAGTGGAATTATAAAGCCTAGCAGAATGACATTACTATTGGGTCCTCCAAGTTCCGGCAAGACCACACTGTTATTGGCTTTGGCTGGAAAGCTTGATCCAGATCTAAAGCTGTCGGGAGCAGTGACTTATAATGGCCATGGAATGAATGAGTTTGTACCCCAAAAAACTGCTGCATACATCAGTCAATATGATATGCATATTGGAGAAATGACTGTAAGGGAGACATTGGCCTTTTCTGCAAGATGCCAAGGGGTCGGAACTCGTTACGATATGCTAGCTGAGCTATCCAGAAGAGAGAAAGCAGCTAATATAAAGCCTGATCCTGACATTGATGTCTTCATGAAGGCAACATCAATAGAAGGTCAGGAGGTGAACGTAGTGACAGATTACATTCTGAAGATTTTGGGACTGGAAGTGTGTGCTGATACGATGGTAGGGGATGAAATGTTAAGAGGTATCTCCGGAGGACAAAGGAAGCGTGTTACAACAGGTGAGATGCTTGTTGGACCAGCAAACGCTTTGTTCATGGACGAGATATCTACCGGTTTGGACAGCTCGACAACATTTCAAATTGTGAATTCAATCAAGCACAATATTCACACATTTAATGGAACAGCTGTCATCTCACTTCTCCAGCCAGCACCAGAGACGTATGAGCTTTTTGATGACATTATCCTCCTCTCAGATGGCCAGATTGTGTACCAGGGTCCTCGTGAGCATGTGCTTCAGTTTTTTGAAACTATGGGATTTAAATGTCCTGAGAGGAAAGGCATTGCTGACTTCCTACAAGAGGTGACATCAAGGAAAGATCAGGAGCAATATTGGGAAAGGAAAGAGGATCCCTATAGTTTTGTTACAGTTAAGAAATTTGTTGAGGCATTTGAATCATTCCATGCGGGACAAAGACTTGGGGAGGAACTTTCAATTCCATTTGACAAAAGAAAGAGCCACCCGGCAGCTTTAACAACGAAAAAGTATGGTGCTAAAAAGGGAGAATTGTTGAAAGCTTGCATCTCAAGGCAACTTTTGCTCATAAAGAGGAATTCCTTTGTCTTTTACTTCAAGTTCACCCAAATTACAATTTTGGCATTGATTAGCATGACAATGTTTCTACGAAGCAAGATGCACCACAGATCAATAGATGATGCAGTAATTTATATGGGTGCTATGTTCTTCGCCAATGTCATAGTTATGTTTAATGGGATGTCAGAGATTTCAATGACCATTTTAAAGCTTCCTGTCTTTTACAAGCAAAGGGACTTTTTCTTCTTCCCTACATGGGCATATGGTCTTCCAGCATGGATTCTCCAAATACCTATATCATTTGTAGAAGTAGCAGTTTGGGTGTTCATGACCTACTACGTGATCGGATATGATCCGAATGTTGGACGGTTTTTCAAGCAATATATCCTCTTCTTGTTTGTTAACCAGATGGCTTCTGGTTTATTTCGTACTATTGGAGCATTGTGTAGAGACTTGGTTGTTGCTAACACTTTGGGGTCATTTGCACTGCTCATACTTTTCACATTAAGTGGCTTTGTTCTCTCTAGAGATGATATTAACAAGGGGTGGATTTGGGGTTACTGGAGTTCACCTCTGATGTACAGTCAGAATGCAATCGTAGTTAACGAGTTACTTGGGAAGAGCTGGAGACATGTACTGCCAAACTCAACAATATCTGTAGGAGTTGCAGCTTTAGAGTACCGCGGAAATGATTATGCAGCACTTGGCAAAATTCAGGCTGTTAAATCAGAAGATTCTGGGAGGATTGCAGAGGAAAGTAGCTCAAGTCAACCAACCACGCCAGAAGTTTCTGCGGAGGCTATTAACAGAGGGAGACGAGGAATGGTTCTTCCATTTGAACCACATTCCATAACCTTTGATGAAATCACATACTCAGTGGACATGCCACAGGAAATGAAGATGGAGGGTGTTGTAGAGGAAAAGTTAGTTCTTCTGAAGGGAGTGAGTGGTTCTTTCAGGCCAGGTGTTTTGACAGCTCTTATGGGTGTAAGTGGTGCTGGTAAAACGACTCTCATGGATGTATTGGCTGGTAGGAAAACTGGTGGATATATTGAAGGAGACATAAAAATTTCCGGGTACCCAAAGAAGCAAGAAACATTTGCTCGGATTTCTGGATATTGTGAGCAAAATGACATTCACTCCCCTCATGTTACTGTCTACGAGTCATTGCTCTACTCAGCATGGCTTCGTTTGCCACCTGAAGTTACATCTGAAACCAAAAACGTGTTCATTGAGGAAGTGATGGAACTTGTGGAACTTAATCCATTAAGGCAAGCACTTGTTGGGTTGCCTGGTATCAATGGTCTTTCAACTGAGCAGCGCAAGAGGCTGACTATCGCAGTTGAGCTAGTAGCGAATCCCTCGGTAATATTCATGGATGAACCAACTTCGGGGTTAGATGCAAGAGCTGCTGCAATTGTCATGAGAACAGTTAGGAACACAGTGGATACTGGTAGAACAGTTGTGTGCACCATCCATCAGCCTAGCATTGACATTTTTGAATCTTTTGATGAGCTACTGCTACTGAAGCGGGGAGGACAAGAAATTTATGTTGGTCCGTTAGGTCGCCATTCTTGCAATCTAATCAAATATTTTGAGGAAATTGAAGGAGTCTGTAAGATAAAAGATGGTTACAATCCAGCAACATGGATGTTGGATGTTTCCACTGCAGCACAAGAATTAGCTTTGGGGATTGATTTCGCTCATGTTTACAAAAAATCAGAACTATACAGGAGAAATAAGCAACTCATTACAGAATATAGCACGCCTTCCCCTTCTTCAAAGGAACTCACTTTCCCTACTCGATACTCACAACCGTTTCTCATCCAATCTATGGCTTGCTTGTGGAAACAACATTGGTCATATTGGCGTAACCCGTCGTACAATGCAGTAAGACTTCTCTTCACAATAGCCATAGCATTGTTGTTTGGGACAATGTTCTGGAATCTTGGCTCCAAAACGAATCGAAAACAAGATCTGTCTAATGCAATGGGCTGTATGTTCACAGCTGTTATCTTTCTCGGGGTCCAAAATGCAACATCTGTGCAACCTATAGTTGCTATTGAAAGAACAGTCTTTTACAGAGAAAAAGCTGCAGGGATGTATTCAGCCTTGGCTTATGCATTTGCACAGGTTACGATTGAGCTACCGTATGTTTTGGTACAAGCTGTGGTTTATGGAGTCATAACTTATCTAATGATCGGATTTGAGAGAACTTTTGTTAAAATCTTTTGGTACATATTCTTCATGTTCTTCACATTGGCGTACTTCACATTTTATGGCATGATGGCTGTGGCGGTTACTCCAAACCATCACATAGCTACTATTGTTTCCAGTGCATTTTATGCAATATGGATGCTCTTTTCTGGTTTTCTTATTCCACGACCGAGGATTCCTATATGGTGGAGATGGTACTACTGGGCATGTCCAATAGCTTGGACATTGTATGGATTGATTACATCACAGTTTGGAGATGTTGATGATATGCTCGAAAATGGTGAAACAGTGAAACAGTTTTTGAGAGGTTATTTCGGTTTCAAACATGATTTTCTGGGAGTTATTGCAGTGGGGCTTGTTGGATATGCAGTGCTCTTTGCATTCATCTTTGCCTTTTCTATAAGAGCGTTTAACTTCCAAAAGCGCTAA

Protein Analysis

1387

Amino Acids

156.12

Weight (kDa)

7.56

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 90 - 136 3.3e-06 ABC-transporter N-terminal
ABC_tran PF00005 162 - 343 2.4e-15 ABC transporter
ABC2_membrane PF01061 498 - 710 2.8e-45 ABC-2 type transporter
ABC_tran PF00005 818 - 970 4.7e-21 ABC transporter
ABC2_membrane PF01061 1116 - 1329 7.8e-61 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 141, 506, 624
AasI GACNNNNNNGTC 1 cut(s) 827
Acc65I GGTACC 1 cut(s) 2595
AccB1I GGYRCC 1 cut(s) 2595
AccB7I CCANNNNNTGG 2 cut(s) 209, 3352
AccI GTMKAC 2 cut(s) 160, 2676
AccII CGCG 1 cut(s) 2202
AccIII TCCGGA 1 cut(s) 956
AciI CCGC 6 cut(s) 1391, 2200, 2202, 2312, 3049, 3815
AclWI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
AcoI YGGCCR 2 cut(s) 628, 1183
AcsI RAATTY 6 cut(s) 1072, 1361, 1537, 2229, 2586, 3063
AcuI CTGAAG 6 cut(s) 279, 911, 1205, 2474, 2739, 3065
AfeI AGCGCT 1 cut(s) 4160
AfiI CCNNNNNNNGG 8 cut(s) 39, 209, 548, 1285, 1774, 1880, 2909, 3352
AflIII ACRYGT 2 cut(s) 2149, 2742
AgeI ACCGGT 1 cut(s) 1037
AjnI CCWGG 4 cut(s) 426, 1197, 2479, 2809
AjuI GAANNNNNNNTTGG 6 cut(s) 215, 247, 2729, 2761, 3054, 3086
AloI GAACNNNNNNTCC 2 cut(s) 3297, 3329
Alw21I GWGCWC 2 cut(s) 2990, 4110
Alw26I GTCTC 7 cut(s) 481, 710, 1136, 1962, 2140, 2326, 2571
Alw44I GTGCAC 1 cut(s) 2986
AlwI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
Ama87I CYCGRG 2 cut(s) 169, 3539
Aor13HI TCCGGA 1 cut(s) 956
Aor51HI AGCGCT 1 cut(s) 4160
AoxI GGCC 4 cut(s) 628, 723, 1183, 2477
ApaLI GTGCAC 1 cut(s) 2986
ApoI RAATTY 6 cut(s) 1072, 1361, 1537, 2229, 2586, 3063
AsiGI ACCGGT 1 cut(s) 1037
Asp718I GGTACC 1 cut(s) 2595
AspLEI GCGC 2 cut(s) 2841, 4161
AspS9I GGNCC 5 cut(s) 536, 1001, 1202, 3074, 3544
AsuC2I CCSGG 2 cut(s) 1448, 2593
AsuHPI GGTGA 7 cut(s) 157, 877, 998, 1300, 1555, 2079, 4028
AsuNHI GCTAGC 1 cut(s) 769
AvaI CYCGRG 2 cut(s) 169, 3539
AvaII GGWCC 5 cut(s) 536, 1001, 1202, 3074, 3544
BaeGI GKGCMC 1 cut(s) 2990
BaeI ACNNNNGTAYC 2 cut(s) 912, 945
BalI TGGCCA 2 cut(s) 630, 1185
BamHI GGATCC 1 cut(s) 1333
BanI GGYRCC 1 cut(s) 2595
BarI GAAGNNNNNNTAC 2 cut(s) 3746, 3778
BauI CACGAG 1 cut(s) 1206
BbsI GAAGAC 4 cut(s) 96, 267, 823, 1778
Bbv12I GWGCWC 2 cut(s) 2990, 4110
BceAI ACGGC 1 cut(s) 280
BciT130I CCWGG 4 cut(s) 428, 1199, 2481, 2811
BciVI GTATCC 1 cut(s) 2959
BcnI CCSGG 2 cut(s) 1448, 2593
BcoDI GTCTC 7 cut(s) 481, 710, 1136, 1962, 2140, 2326, 2571
BfaI CTAG 6 cut(s) 122, 513, 770, 2043, 2867, 3003
BfmI CTRYAG 5 cut(s) 1339, 2175, 3186, 3570, 3612
BfoI RGCGCY 1 cut(s) 4162
BfuI GTATCC 1 cut(s) 2959
BglII AGATCT 2 cut(s) 595, 3493
BlpI GCTNAGC 1 cut(s) 774
Bme1390I CCNGG 6 cut(s) 428, 1199, 1448, 2481, 2593, 2811
Bme18I GGWCC 5 cut(s) 536, 1001, 1202, 3074, 3544
BmeT110I CYCGRG 2 cut(s) 169, 3539
BmgT120I GGNCC 5 cut(s) 536, 1001, 1202, 3074, 3544
BmiI GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2597, 3472, 3545
BmrFI CCNGG 6 cut(s) 428, 1199, 1448, 2481, 2593, 2811
BmrI ACTGGG 1 cut(s) 3946
BmsI GCATC 8 cut(s) 358, 728, 981, 1515, 1608, 1630, 2908, 3864
BmtI GCTAGC 1 cut(s) 773
BmuI ACTGGG 1 cut(s) 3946
BoxI GACNNNNGTC 1 cut(s) 473
BpiI GAAGAC 4 cut(s) 96, 267, 823, 1778
BplI GAGNNNNNCTC 2 cut(s) 2074, 2106
BpmI CTGGAG 3 cut(s) 1112, 2101, 2164
Bpu1102I GCTNAGC 1 cut(s) 774
BpuEI CTTGAG 3 cut(s) 275, 1495, 2266
BpuMI CCSGG 2 cut(s) 1448, 2593
BsaAI YACGTR 1 cut(s) 1858
BsaBI GATNNNNATC 1 cut(s) 594
BsaWI WCCGGW 2 cut(s) 956, 1037
BsaXI ACNNNNNCTCC 2 cut(s) 2642, 2672
Bsc4I CCNNNNNNNGG 8 cut(s) 39, 209, 548, 1285, 1774, 1880, 2909, 3352
Bse118I RCCGGY 1 cut(s) 1037
Bse1I ACTGG 7 cut(s) 413, 909, 2084, 2563, 2974, 3852, 3941
Bse3DI GCAATG 3 cut(s) 1266, 2684, 3513
Bse8I GATNNNNATC 1 cut(s) 594
BseAI TCCGGA 1 cut(s) 956
BseBI CCWGG 4 cut(s) 428, 1199, 2481, 2811
BseJI GATNNNNATC 1 cut(s) 594
BseLI CCNNNNNNNGG 8 cut(s) 39, 209, 548, 1285, 1774, 1880, 2909, 3352
BseMI GCAATG 3 cut(s) 1266, 2684, 3513
BseMII CTCAG 8 cut(s) 140, 460, 765, 1191, 1245, 2406, 2709, 2823
BseNI ACTGG 7 cut(s) 413, 909, 2084, 2563, 2974, 3852, 3941
BseRI GAGGAG 1 cut(s) 1163
BseSI GKGCMC 1 cut(s) 2990
Bsh1236I CGCG 1 cut(s) 2202
Bsh1285I CGRYCG 1 cut(s) 3905
BshFI GGCC 4 cut(s) 630, 725, 1185, 2479
BshNI GGYRCC 1 cut(s) 2595
BshTI ACCGGT 1 cut(s) 1037
BsiEI CGRYCG 1 cut(s) 3905
BsiHKAI GWGCWC 2 cut(s) 2990, 4110
BsiHKCI CYCGRG 2 cut(s) 169, 3539
BsiSI CCGG 5 cut(s) 549, 957, 1038, 1448, 2592
BslFI GGGAC 4 cut(s) 915, 1407, 1766, 3463
BslI CCNNNNNNNGG 8 cut(s) 39, 209, 548, 1285, 1774, 1880, 2909, 3352
BsmAI GTCTC 7 cut(s) 481, 710, 1136, 1962, 2140, 2326, 2571
BsmBI CGTCTC 3 cut(s) 481, 1136, 2326
BsmFI GGGAC 4 cut(s) 915, 1407, 1766, 3463
BsmI GAATGC 2 cut(s) 2113, 4115
BsnI GGCC 4 cut(s) 630, 725, 1185, 2479
BsoBI CYCGRG 2 cut(s) 169, 3539
Bsp1286I GDGCHC 2 cut(s) 2990, 4110
Bsp13I TCCGGA 1 cut(s) 956
Bsp1407I TGTACA 1 cut(s) 2097
Bsp1720I GCTNAGC 1 cut(s) 774
Bsp19I CCATGG 2 cut(s) 49, 631
BspACI CCGC 6 cut(s) 1391, 2200, 2202, 2312, 3049, 3815
BspANI GGCC 4 cut(s) 630, 725, 1185, 2479
BspCNI CTCAG 8 cut(s) 141, 459, 766, 1190, 1246, 2405, 2708, 2824
BspEI TCCGGA 1 cut(s) 956
BspFNI CGCG 1 cut(s) 2202
BspHI TCATGA 3 cut(s) 834, 1845, 2940
BspLI GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2597, 3472, 3545
BspMAI CTGCAG 2 cut(s) 3190, 3616
BspOI GCTAGC 1 cut(s) 773
BspPI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
BspQI GCTCTTC 1 cut(s) 2132
BspT107I GGYRCC 1 cut(s) 2595
BsrDI GCAATG 3 cut(s) 1266, 2684, 3513
BsrFI RCCGGY 1 cut(s) 1037
BsrGI TGTACA 1 cut(s) 2097
BsrI ACTGG 7 cut(s) 413, 909, 2084, 2563, 2974, 3852, 3941
BssAI RCCGGY 1 cut(s) 1037
BssNAI GTATAC 1 cut(s) 161
BssSI CACGAG 1 cut(s) 1206
BssT1I CCWWGG 4 cut(s) 49, 631, 742, 3630
Bst1107I GTATAC 1 cut(s) 161
Bst2BI CACGAG 1 cut(s) 1206
Bst2UI CCWGG 4 cut(s) 428, 1199, 2481, 2811
Bst6I CTCTTC 5 cut(s) 213, 781, 1913, 2132, 3425
BstAPI GCANNNNNTGC 3 cut(s) 1522, 2927, 3863
BstAUI TGTACA 1 cut(s) 2097
BstBAI YACGTR 1 cut(s) 1858
BstC8I GCNNGC 6 cut(s) 771, 1134, 1504, 2793, 3284, 3358
BstDEI CTNAG 8 cut(s) 149, 446, 774, 1177, 1254, 2392, 2695, 2832
BstDSI CCRYGG 3 cut(s) 49, 631, 2200
BstENI CCTNNNNNAGG 1 cut(s) 1283
BstFNI CGCG 1 cut(s) 2202
BstH2I RGCGCY 1 cut(s) 4162
BstHHI GCGC 2 cut(s) 2841, 4161
BstMAI GTCTC 7 cut(s) 481, 710, 1136, 1962, 2140, 2326, 2571
BstMCI CGRYCG 1 cut(s) 3905
BstMWI GCNNNNNNNGC 9 cut(s) 731, 775, 1522, 2710, 2845, 2927, 3046, 3093, 3863
BstNI CCWGG 4 cut(s) 428, 1199, 2481, 2811
BstNSI RCATGY 4 cut(s) 1217, 2153, 2404, 3945
BstPAI GACNNNNGTC 1 cut(s) 473
BstSCI CCNGG 6 cut(s) 426, 1197, 1446, 2479, 2591, 2809
BstSFI CTRYAG 5 cut(s) 1339, 2175, 3186, 3570, 3612
BstSLI GKGCMC 1 cut(s) 2990
BstUI CGCG 1 cut(s) 2202
BstV2I GAAGAC 4 cut(s) 96, 267, 823, 1778
BstX2I RGATCY 3 cut(s) 595, 1333, 3493
BstXI CCANNNNNNTGG 2 cut(s) 3165, 3954
BstYI RGATCY 3 cut(s) 595, 1333, 3493
BstZ17I GTATAC 1 cut(s) 161
BsuI GTATCC 1 cut(s) 2959
BsuRI GGCC 4 cut(s) 630, 725, 1185, 2479
BtgI CCRYGG 3 cut(s) 49, 631, 2200
BtsI GCAGTG 6 cut(s) 181, 621, 2003, 3183, 4089, 4110
Cac8I GCNNGC 6 cut(s) 771, 1134, 1504, 2793, 3284, 3358
CciI TCATGA 3 cut(s) 834, 1845, 2940
CfoI GCGC 2 cut(s) 2841, 4161
Cfr10I RCCGGY 1 cut(s) 1037
Cfr13I GGNCC 5 cut(s) 536, 1001, 1202, 3074, 3544
Cfr42I CCGCGG 1 cut(s) 2203
CseI GACGC 1 cut(s) 71
CspAI ACCGGT 1 cut(s) 1037
CspCI CAANNNNNGTGG 2 cut(s) 478, 513
DdeI CTNAG 8 cut(s) 149, 446, 774, 1177, 1254, 2392, 2695, 2832
DraI TTTAAA 2 cut(s) 1246, 1725
DrdI GACNNNNNNGTC 1 cut(s) 827
DseDI GACNNNNNNGTC 1 cut(s) 827
EaeI YGGCCR 2 cut(s) 628, 1183
Eam1104I CTCTTC 5 cut(s) 213, 781, 1913, 2132, 3425
EarI CTCTTC 5 cut(s) 213, 781, 1913, 2132, 3425
Eco130I CCWWGG 4 cut(s) 49, 631, 742, 3630
Eco32I GATATC 1 cut(s) 1032
Eco47I GGWCC 5 cut(s) 536, 1001, 1202, 3074, 3544
Eco47III AGCGCT 1 cut(s) 4160
Eco57I CTGAAG 6 cut(s) 279, 911, 1205, 2474, 2739, 3065
Eco88I CYCGRG 2 cut(s) 169, 3539
EcoNI CCTNNNNNAGG 1 cut(s) 1283
EcoO109I RGGNCCY 2 cut(s) 536, 1202
EcoRI GAATTC 2 cut(s) 1072, 1537
EcoRII CCWGG 4 cut(s) 426, 1197, 2479, 2809
EcoRV GATATC 1 cut(s) 1032
EcoT14I CCWWGG 4 cut(s) 49, 631, 742, 3630
EcoT22I ATGCAT 2 cut(s) 693, 3643
ErhI CCWWGG 4 cut(s) 49, 631, 742, 3630
Esp3I CGTCTC 3 cut(s) 481, 1136, 2326
FalI AAGNNNNNCTT 2 cut(s) 373, 405
FaqI GGGAC 4 cut(s) 915, 1407, 1766, 3463
FauI CCCGC 2 cut(s) 1384, 3042
FauNDI CATATG 1 cut(s) 1780
FblI GTMKAC 2 cut(s) 160, 2676
FspBI CTAG 6 cut(s) 122, 513, 770, 2043, 2867, 3003
GlaI GCGC 2 cut(s) 2840, 4160
GsuI CTGGAG 3 cut(s) 1112, 2101, 2164
HaeII RGCGCY 1 cut(s) 4162
HaeIII GGCC 4 cut(s) 630, 725, 1185, 2479
HapII CCGG 5 cut(s) 549, 957, 1038, 1448, 2592
HgaI GACGC 1 cut(s) 71
HhaI GCGC 2 cut(s) 2841, 4161
Hin6I GCGC 2 cut(s) 2839, 4159
HinP1I GCGC 2 cut(s) 2839, 4159
HincII GTYRAC 3 cut(s) 1921, 2122, 2288
HindII GTYRAC 3 cut(s) 1921, 2122, 2288
HindIII AAGCTT 5 cut(s) 128, 369, 584, 1500, 1727
HpaI GTTAAC 2 cut(s) 1921, 2122
HpaII CCGG 5 cut(s) 549, 957, 1038, 1448, 2592
HphI GGTGA 7 cut(s) 157, 877, 998, 1300, 1555, 2079, 4028
Hpy99I CGWCG 1 cut(s) 3400
HpyAV CCTTC 7 cut(s) 832, 848, 2449, 2567, 3119, 3297, 3303
HpyCH4IV ACGT 5 cut(s) 474, 870, 1145, 1857, 2742
HpyF10VI GCNNNNNNNGC 9 cut(s) 731, 775, 1522, 2710, 2845, 2927, 3046, 3093, 3863
HpyF3I CTNAG 8 cut(s) 149, 446, 774, 1177, 1254, 2392, 2695, 2832
HpySE526I ACGT 5 cut(s) 474, 870, 1145, 1857, 2742
HspAI GCGC 2 cut(s) 2839, 4159
Kpn2I TCCGGA 1 cut(s) 956
KpnI GGTACC 1 cut(s) 2599
KspAI GTTAAC 2 cut(s) 1921, 2122
KspI CCGCGG 1 cut(s) 2203
LguI GCTCTTC 1 cut(s) 2132
LmnI GCTCC 4 cut(s) 611, 1309, 1955, 3476
LweI GCATC 8 cut(s) 358, 728, 981, 1515, 1608, 1630, 2908, 3864
MaeI CTAG 6 cut(s) 122, 513, 770, 2043, 2867, 3003
MaeII ACGT 5 cut(s) 474, 870, 1145, 1857, 2742
MfeI CAATTG 2 cut(s) 330, 2934
MflI RGATCY 3 cut(s) 595, 1333, 3493
MhlI GDGCHC 2 cut(s) 2990, 4110
MlsI TGGCCA 2 cut(s) 630, 1185
MluNI TGGCCA 2 cut(s) 630, 1185
MlyI GAGTC 4 cut(s) 2521, 2690, 3138, 3708
MmeI TCCRAC 6 cut(s) 292, 730, 979, 1861, 3153, 4075
Mox20I TGGCCA 2 cut(s) 630, 1185
Mph1103I ATGCAT 2 cut(s) 693, 3643
MroI TCCGGA 1 cut(s) 956
MscI TGGCCA 2 cut(s) 630, 1185
MslI CAYNNNNRTG 3 cut(s) 54, 1598, 1685
Msp20I TGGCCA 2 cut(s) 630, 1185
MspA1I CMGCKG 3 cut(s) 1112, 2202, 3527
MspI CCGG 5 cut(s) 549, 957, 1038, 1448, 2592
MspR9I CCNGG 6 cut(s) 428, 1199, 1448, 2481, 2593, 2811
MunI CAATTG 2 cut(s) 330, 2934
Mva1269I GAATGC 2 cut(s) 2113, 4115
MvaI CCWGG 4 cut(s) 428, 1199, 2481, 2811
MvnI CGCG 1 cut(s) 2202
MwoI GCNNNNNNNGC 9 cut(s) 731, 775, 1522, 2710, 2845, 2927, 3046, 3093, 3863
NciI CCSGG 2 cut(s) 1448, 2593
NcoI CCATGG 2 cut(s) 49, 631
NdeI CATATG 1 cut(s) 1780
NheI GCTAGC 1 cut(s) 769
NlaIV GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2597, 3472, 3545
NmeAIII GCCGAG 1 cut(s) 410
NmuCI GTSAC 3 cut(s) 616, 874, 1288
NsiI ATGCAT 2 cut(s) 693, 3643
NspI RCATGY 4 cut(s) 1217, 2153, 2404, 3945
PagI TCATGA 3 cut(s) 834, 1845, 2940
PciI ACATGT 1 cut(s) 2149
PciSI GCTCTTC 1 cut(s) 2132
PcsI WCGNNNNNNNCGW 1 cut(s) 2121
PctI GAATGC 2 cut(s) 2113, 4115
PflMI CCANNNNNTGG 2 cut(s) 209, 3352
PinAI ACCGGT 1 cut(s) 1037
PleI GAGTC 4 cut(s) 2521, 2689, 3137, 3707
PpsI GAGTC 4 cut(s) 2521, 2689, 3137, 3707
Ppu21I YACGTR 1 cut(s) 1858
PpuMI RGGWCCY 2 cut(s) 536, 1202
PscI ACATGT 1 cut(s) 2149
PshAI GACNNNNGTC 1 cut(s) 473
PsiI TTATAA 3 cut(s) 141, 506, 624
Psp5II RGGWCCY 2 cut(s) 536, 1202
Psp6I CCWGG 4 cut(s) 426, 1197, 2479, 2809
PspGI CCWGG 4 cut(s) 426, 1197, 2479, 2809
PspN4I GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2597, 3472, 3545
PspPI GGNCC 5 cut(s) 536, 1001, 1202, 3074, 3544
PspPPI RGGWCCY 2 cut(s) 536, 1202
PstI CTGCAG 2 cut(s) 3190, 3616
PsuI RGATCY 3 cut(s) 595, 1333, 3493
PvuII CAGCTG 2 cut(s) 1112, 3527
RseI CAYNNNNRTG 3 cut(s) 54, 1598, 1685
SacII CCGCGG 1 cut(s) 2203
SapI GCTCTTC 1 cut(s) 2132
Sau96I GGNCC 5 cut(s) 536, 1001, 1202, 3074, 3544
SchI GAGTC 4 cut(s) 2521, 2690, 3138, 3708
ScrFI CCNGG 6 cut(s) 428, 1199, 1448, 2481, 2593, 2811
SduI GDGCHC 2 cut(s) 2990, 4110
SfaNI GCATC 8 cut(s) 358, 728, 981, 1515, 1608, 1630, 2908, 3864
SfcI CTRYAG 5 cut(s) 1339, 2175, 3186, 3570, 3612
Sfr303I CCGCGG 1 cut(s) 2203
SgrBI CCGCGG 1 cut(s) 2203
SinI GGWCC 5 cut(s) 536, 1001, 1202, 3074, 3544
SmiI ATTTAAAT 1 cut(s) 1246
SmiMI CAYNNNNRTG 3 cut(s) 54, 1598, 1685
SmlI CTYRAG 3 cut(s) 290, 1510, 2281
SmoI CTYRAG 3 cut(s) 290, 1510, 2281
SsiI CCGC 6 cut(s) 1391, 2200, 2202, 2312, 3049, 3815
SspI AATATT 4 cut(s) 1090, 1316, 2889, 3110
SspMI CTAG 6 cut(s) 122, 513, 770, 2043, 2867, 3003
StyD4I CCNGG 6 cut(s) 426, 1197, 1446, 2479, 2591, 2809
StyI CCWWGG 4 cut(s) 49, 631, 742, 3630
SwaI ATTTAAAT 1 cut(s) 1246
TaiI ACGT 5 cut(s) 477, 873, 1148, 1860, 2745
TaqI TCGA 6 cut(s) 71, 340, 1052, 3322, 3484, 4008
TaqII GACCGA 1 cut(s) 3919
TatI WGTACW 2 cut(s) 2097, 2152
TseFI GTSAC 3 cut(s) 616, 874, 1288
Tsp45I GTSAC 3 cut(s) 616, 874, 1288
TspGWI ACGGA 1 cut(s) 3066
Van91I CCANNNNNTGG 2 cut(s) 209, 3352
VneI GTGCAC 1 cut(s) 2986
VpaK11BI GGWCC 5 cut(s) 536, 1001, 1202, 3074, 3544
XagI CCTNNNNNAGG 1 cut(s) 1283
XapI RAATTY 6 cut(s) 1072, 1361, 1537, 2229, 2586, 3063
XbaI TCTAGA 1 cut(s) 2042
XceI RCATGY 4 cut(s) 1217, 2153, 2404, 3945
XcmI CCANNNNNNNNNTGG 2 cut(s) 565, 1931
XmiI GTMKAC 2 cut(s) 160, 2676
XspI CTAG 6 cut(s) 122, 513, 770, 2043, 2867, 3003
Zsp2I ATGCAT 2 cut(s) 693, 3643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.