FvH4_6g30730
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
23809527 .. 23819271
9745 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g30730.t1

Sequence Viewer

Length: 4269 bp
ATGGAGAGTGGTAATATCCAATTAGGCAGTTCGTCAATCAGGAGGAACCATGGTCGTATGGAAGCTTTTTCGAGTTCTGCGCGTGGAGACAACGATGAAGAAGCTCTCAAATGGGCAGCCCTAGAGAAGCTTCCTACTTATAATCGTCTGAGGAAAGGTATACTCACCTCAGCAAGTGGAAAAGCTAATGAAATTGATATACCAAATCTTGGGTTTCAACAGAGAAAGGACTTGATTGAGAGATTGCTAAAAAACACTGAAGATGGCAACGAAAAGTTCTTGTTGAAGCTCAAGAATCGTATTGATAGAGTTGGAATCGATCTTCCCACAATTGAAGTTCGATTTGAGCATCTAAACATAGAAGCAGAAGCTTATCTAGGCAGCCGAGCTTTGCCTACTCTCCTAAACTGGAGTACCAACATAATCGAGGGATTGTTGACCTATATCGGTATAATTTCAAGTAGAAAGACGAACTTCTCTATCCTTCAGAATGTTAGTGGAATTATAAAGCCTAGCAGAATGACATTACTATTGGGTCCTCCAAGTTCAGGCAAGACCACGCTGTTATTGGCTTTGGCTGGAAAGCTTGATCCAGATCTAAAGTTGTCGGGAAGGGTGACTTATAATGGCCATGGGATGAATGAATTTGTACCCCAAAAAACTGCTGCATACATAAGTCAATATGATGTGCATATTGGAGAAATGACTGTAAGGGAGACATTGGCCTTCTCTGCAAGATGCCAAGGGGTTGGAACACGTTATGATATGCTAGCTGAGCTAGCCAGAAGAGAGAAAGCAGCTAATATAAAGCCTGATCCTGACATTGATGTCTTCATGAAGGCAACAACAATAGAAGGTCAGGAAGTGAACGTAGTGACAGATTACATTTTGAAGATTTTGGGATTGGAAGCGTGTGCTGATACGATAGTAGGTGATGACATGTTAAGAGGTATCTCTGGTGGACAGAGGAAGCGAGTTACAACAGGTGAGATGCTTGTTGGACCAACAAATGCTTTGTTCATGGATGAGATATCTACTGGTTTGGACAGCTCGACGACATTTCAAATTGTGAACTCAATAAAGCAAAACATTCACATTCTTAATGGAACTGCAGTCATCTCACTCCTTCAGCCAGCACCGGAGACTTACGAGCTTTTTGATGACATTATCCTTCTCTCTGATGGACAGATTGTGTACCAGGGTCCTCGTGAGAATGTGCTTGAGTTTTTCGAAACTATGGGATTTAAATGTCCTGAGAGAAAAGGCATCGCTGACTTCCTACAAGAGGTGACATCGAGGAAAGATCAAGAGCAATATTGGGAAAGGAAAGAGGATCCCTATAGTTTTGTTACAGTTAAGGAATTTGCCGAGGCATTTCAATCATTCCATGTGGGACAAAGACTTGGGGAGGAACTTTCAGTTCCATTTGACAAAAGAAAAAACCACCCGGCTGCTTTAACAACCAAAAAATATAGTGTGAAAAAGGGAGAACTTCTGAAAGCTTGCGTCTCAAGGGAAATTTTGCTCATGAAGAGGAATTCCTTTGTGTATTACTTCAAGCTAATCCAAATTACATTTCTGGCACTGATGTTCATGACAACGTTTCTACGAACCAAGATGCACCACAGCTCAATAGATGATGCAATAGTTTATGCGGGTGCTTTGTTCTTTGCTAATATCGTAATCATGTTTAATGGGATGGCAGAGCTTTCGATGACCCTTATAAAGCTTCCTGTTTTTTACAAGCAAAGGGATTTTTTCTTCTACCCTTCATGGGCATATGCTCTTCCAACATGGATTCTCAAAGTACCTATATCACTTGTTGAAGTTGCAATTTGGGTGTTTATGACCTACTACGTAACTGGATTTGATCCAAATGTTGGACGGTTATTTAAGCAATATCTTCTGTTCTTGCTCGTTAACCAGATGGCTTCTGCTTTATTCCGCGCTATTGCAGCATTGTGTAGAGAGATGGTTGTTGCTTACAGTTTGGGGTCATTTGCAAATCTCATATTTTTCACATTATGTGGCTTCATACTCGCTAGAGCAGACAAGATTAACAAGTTGTGGAAATGGGGTTACTGGAGTTCACCTCTGATGTACAGTCAGAATGCATTAATAGTTAATGAGTTACTTGGGAAGAATTGGAGACATGTACTGCCAAACTCAACGGTGTCCATAGGAGTTGCAGCTTTAAAGTATCGAAGCTTCTTTACAAACGCATATTGGTATTGGATAGGAGTTTGTGCACTGATCGGATATGTGTTGCTATTCAACCTTGGTTATGTTCTAGCTCTCTCCTACCTACACCCACTTGGCAAAACTCAGGCTTTTAAATCAGAAGATTCTGTGAGGATAGCAGAGGAAAGTAGGTCTAGTCAACCAACCATACCAGAGAGCATTTACACAGTTTCACCAGATGCTATTAATGTAAGGAAACGAGGAATGGTTCTTCCTTTTGAACCACATTCCATAACCTTTGATGAAATCACATACTCAGTTGACATGCCAAAGGAAATGAAGATGGAAGGTGTTGTAGAGGAAAAGTTAGTTCTTCTGAAGGGTGTTAGCGGTTCTTTTAGGCCAGGTGTTTTAACAGCTCTTATGGGTGTAAGTGGTGCTGGTAAAACAACTCTCATGGATGTATTGGCTGGTAGAAAAACAAGTGGATATTTTGATGGCGACATCAAAATTTCTGGGTACCCAAAGAAGCAAGAAACATTTGCTCGGATTTCTGGGTATTGTGAGCAAACTGACATTCACTCCCCTCAACTTACTGTCTACGAGTCAATAGTGTACTCAGCATGGCTTCGTTTATCACCTGAAGTGAAATCTGAAACCAAAAGGGTGTTCATTGAGGAAGTGATGGAACTTGTGGAACTTAATCCATTGAGGCAATCATTTGTTGGGTTGCCAGGTATCAATGGTCTTTCAACTGAGCAGCGCAAGAGGCTGACTATAGCAGTTGAGCTAGTAGCAAATCCCTCTATAATATTCATGGATGAACCGACTTCGGGGTTAGATGCAAGAGCTGCTGCAATCGTCATGAGAACAGTTAGAAACACAGTGGATACTGGTAGAACGGTTGTGTGTACCATTCATCAGCCAAGCATCGACATTTTTGAAGCTTTTGATGAGCTGCTCTTGCTGAAGCGGGGAGGACAAGAAATTTATGTGGGTCCATTAGGTCGCCATTCTTGCAATCTAATCAAATATTTTGAGGAAATTGAAGGAGTCAGTAAAATAAAAGATGGTTATAACCCAGCAACATGGATGTTGGACGTTTCCACTTCAGCACAAGAATTAGCTTTGGGGATTGAGTTCGCTTATGTTTACAAAAATTCAGAACTATACAGGAGAAACAAGCAACTCATTACAGAATACAGCACGCCTTCTCCTTCTTCAAAGGAACTCTTTTTCCCTACTCGATACGCACAATCATTTCTCATCCAATCTATGGCTTGCTTGTGGAAACAACATTGGTCTTATTGGCGTAACCCATCGTACATCTCAGTCAGAATTCTCTTCACATTGATCACAGCATTGATGTTTGGGACAATGTTCTGGAATCTTGGCTCCAAAACGAAAACAAAACAAGATTTGTTTAACGCGATGGGATGTATGTACACTGCTGTTCTCTTTATCGGGGTCAAAAATTCAATGTCAGTCCAACCTGTAGTTGCTGTTGAAAGAACTGTCTTTTACAGAGAGAAAGCGGCAGGGATGTATACATCATTAGCTTATGCATTTGCACAGGTTACAATTGAGCTCCCATATCTTTTGGTACAAAGTGTGGTTTATGGAGTCACAACTTATCTCATGATTGGATTTGAGAGAAAGTTTGTTAAATTCTTTTGGTACATATTCTACATGTATTTCACATTGGCATACTGTACATTTTATGGCATGATGACTGTGGCGATTACTCCGAACTATCAAATCGCGTCTGTTGTGTCCTCTTTGTTCTATGGAGTGTGGAATCTCTTTTCTGGTTTTCTTATTCCACGAACGAGAATTCCAATATGGTGGAGATGGTACTACTGGGCCTGTCCAATAGCTTGGACATTGTATGGATTGGTTGCATCACAGTTTGGAGATCTAGATGATATGCTCGACAATGGTGAAACAGTGGAACAGTTTTTGAGACATTTTTTTGGTTTCAAACATGATTTTGTGGGAGTTGTTGCAGTAGCGCTTGTTGGGTTTACCTTCCTGTTTGCATTCATCTTTGCGTTTTCTATAAGAGTGCTTAACTTCCAAAAGCGCTAA

Protein Analysis

1423

Amino Acids

161.29

Weight (kDa)

8.68

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 89 - 136 5.1e-06 ABC-transporter N-terminal
ABC_tran PF00005 162 - 343 1.1e-15 ABC transporter
ABC2_membrane_7 PF19055 377 - 428 4.1e-06 ABC-2 type transporter
ABC2_membrane PF01061 498 - 711 3.4e-46 ABC-2 type transporter
PDR_assoc PF08370 716 - 777 5.4e-24 Plant PDR ABC transporter associated
ABC_tran PF00005 853 - 1005 3.3e-20 ABC transporter
ABC2_membrane PF01061 1151 - 1364 1.6e-58 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 141, 506, 624, 1724, 3258
AasI GACNNNNNNGTC 1 cut(s) 827
Acc65I GGTACC 1 cut(s) 2700
AccB1I GGYRCC 1 cut(s) 2700
AccB7I CCANNNNNTGG 3 cut(s) 209, 1880, 3457
AccI GTMKAC 3 cut(s) 160, 2781, 3728
AccII CGCG 4 cut(s) 82, 1947, 3611, 3944
AciI CCGC 5 cut(s) 1655, 1945, 2571, 3154, 3716
AclI AACGTT 1 cut(s) 1601
AclWI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
AcoI YGGCCR 1 cut(s) 628
AcuI CTGAAG 7 cut(s) 279, 470, 1112, 2579, 2844, 3170, 3276
AfeI AGCGCT 2 cut(s) 4194, 4265
AfiI CCNNNNNNNGG 7 cut(s) 209, 548, 1285, 1774, 1880, 3014, 3457
AflIII ACRYGT 4 cut(s) 755, 939, 2152, 3870
AjnI CCWGG 3 cut(s) 1197, 2584, 2914
AjuI GAANNNNNNNTTGG 4 cut(s) 1560, 1592, 2834, 2866
AloI GAACNNNNNNTCC 4 cut(s) 3402, 3434, 4000, 4032
Alw21I GWGCWC 2 cut(s) 2251, 3771
Alw26I GTCTC 6 cut(s) 81, 710, 1136, 1513, 2143, 4138
Alw44I GTGCAC 1 cut(s) 2247
AlwI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
Aor51HI AGCGCT 2 cut(s) 4194, 4265
AoxI GGCC 4 cut(s) 628, 723, 2582, 4044
ApaLI GTGCAC 1 cut(s) 2247
AseI ATTAAT 2 cut(s) 2117, 2427
Asp718I GGTACC 1 cut(s) 2700
AspLEI GCGC 5 cut(s) 82, 1949, 2946, 4195, 4266
AspS9I GGNCC 5 cut(s) 536, 1001, 1202, 3179, 4044
AsuC2I CCSGG 1 cut(s) 1448
AsuHPI GGTGA 9 cut(s) 157, 628, 944, 998, 1300, 2082, 2406, 2811, 4133
AsuII TTCGAA 1 cut(s) 1230
AsuNHI GCTAGC 2 cut(s) 769, 778
AvaII GGWCC 4 cut(s) 536, 1001, 1202, 3179
BaeGI GKGCMC 1 cut(s) 2251
BaeI ACNNNNGTAYC 4 cut(s) 397, 430, 912, 945
BalI TGGCCA 1 cut(s) 630
BamHI GGATCC 1 cut(s) 1333
BanI GGYRCC 1 cut(s) 2700
BanII GRGCYC 1 cut(s) 3771
BarI GAAGNNNNNNTAC 4 cut(s) 2192, 2197, 2224, 2229
BauI CACGAG 1 cut(s) 1206
BbsI GAAGAC 1 cut(s) 823
Bbv12I GWGCWC 2 cut(s) 2251, 3771
BbvCI CCTCAGC 1 cut(s) 169
BcgI CGANNNNNNTGC 2 cut(s) 1692, 1726
BciT130I CCWGG 3 cut(s) 1199, 2586, 2916
BciVI GTATCC 1 cut(s) 3064
BclI TGATCA 1 cut(s) 3534
BcnI CCSGG 1 cut(s) 1448
BcoDI GTCTC 6 cut(s) 81, 710, 1136, 1513, 2143, 4138
BfmI CTRYAG 4 cut(s) 1110, 1339, 2958, 3675
BfoI RGCGCY 2 cut(s) 4196, 4267
BfuI GTATCC 1 cut(s) 3064
BglII AGATCT 2 cut(s) 595, 4096
BlpI GCTNAGC 1 cut(s) 774
Bme1390I CCNGG 4 cut(s) 1199, 1448, 2586, 2916
Bme18I GGWCC 4 cut(s) 536, 1001, 1202, 3179
BmgT120I GGNCC 5 cut(s) 536, 1001, 1202, 3179, 4044
BmiI GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2702, 3180, 3577
BmrFI CCNGG 4 cut(s) 1199, 1448, 2586, 2916
BmrI ACTGGG 1 cut(s) 4051
BmtI GCTAGC 2 cut(s) 773, 782
BmuI ACTGGG 1 cut(s) 4051
BpiI GAAGAC 1 cut(s) 823
BplI GAGNNNNNCTC 2 cut(s) 2077, 2109
BpmI CTGGAG 2 cut(s) 430, 2104
Bpu10I CCTNAGC 1 cut(s) 169
Bpu1102I GCTNAGC 1 cut(s) 774
Bpu14I TTCGAA 1 cut(s) 1230
BpuEI CTTGAG 3 cut(s) 275, 1241, 1495
BpuMI CCSGG 1 cut(s) 1448
Bsa29I ATCGAT 1 cut(s) 318
BsaAI YACGTR 1 cut(s) 1858
BsaBI GATNNNNATC 1 cut(s) 594
BsaJI CCNNGG 6 cut(s) 49, 631, 742, 1198, 1368, 2278
BsaWI WCCGGW 1 cut(s) 1138
BsaXI ACNNNNNCTCC 4 cut(s) 2747, 2777, 3379, 3409
Bsc4I CCNNNNNNNGG 7 cut(s) 209, 548, 1285, 1774, 1880, 3014, 3457
Bse1I ACTGG 6 cut(s) 413, 1042, 1867, 2087, 3079, 4046
Bse8I GATNNNNATC 1 cut(s) 594
BseBI CCWGG 3 cut(s) 1199, 2586, 2916
BseCI ATCGAT 1 cut(s) 318
BseDI CCNNGG 6 cut(s) 49, 631, 742, 1198, 1368, 2278
BseGI GGATG 9 cut(s) 642, 1030, 1704, 2647, 3007, 3279, 3447, 3623, 3729
BseJI GATNNNNATC 1 cut(s) 594
BseLI CCNNNNNNNGG 7 cut(s) 209, 548, 1285, 1774, 1880, 3014, 3457
BseMII CTCAG 9 cut(s) 140, 183, 765, 1245, 2339, 2511, 2814, 2928, 3525
BseNI ACTGG 6 cut(s) 413, 1042, 1867, 2087, 3079, 4046
BseSI GKGCMC 1 cut(s) 2251
BseYI CCCAGC 1 cut(s) 3262
Bsh1236I CGCG 4 cut(s) 82, 1947, 3611, 3944
BshFI GGCC 4 cut(s) 630, 725, 2584, 4046
BshNI GGYRCC 1 cut(s) 2700
BshVI ATCGAT 1 cut(s) 318
BsiHKAI GWGCWC 2 cut(s) 2251, 3771
BsiSI CCGG 2 cut(s) 1139, 1448
BslFI GGGAC 2 cut(s) 1407, 3568
BslI CCNNNNNNNGG 7 cut(s) 209, 548, 1285, 1774, 1880, 3014, 3457
BsmAI GTCTC 6 cut(s) 81, 710, 1136, 1513, 2143, 4138
BsmBI CGTCTC 1 cut(s) 1513
BsmFI GGGAC 2 cut(s) 1407, 3568
BsmI GAATGC 2 cut(s) 2116, 4220
BsnI GGCC 4 cut(s) 630, 725, 2584, 4046
Bsp119I TTCGAA 1 cut(s) 1230
Bsp1286I GDGCHC 2 cut(s) 2251, 3771
Bsp1407I TGTACA 3 cut(s) 2100, 3624, 3893
Bsp1720I GCTNAGC 1 cut(s) 774
Bsp19I CCATGG 2 cut(s) 49, 631
BspACI CCGC 5 cut(s) 1655, 1945, 2571, 3154, 3716
BspANI GGCC 4 cut(s) 630, 725, 2584, 4046
BspCNI CTCAG 9 cut(s) 141, 182, 766, 1246, 2338, 2510, 2813, 2929, 3524
BspDI ATCGAT 1 cut(s) 318
BspFNI CGCG 4 cut(s) 82, 1947, 3611, 3944
BspHI TCATGA 5 cut(s) 834, 1527, 1593, 3045, 3819
BspLI GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2702, 3180, 3577
BspMAI CTGCAG 1 cut(s) 1114
BspOI GCTAGC 2 cut(s) 773, 782
BspPI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
BspQI GCTCTTC 1 cut(s) 1791
BspT104I TTCGAA 1 cut(s) 1230
BspT107I GGYRCC 1 cut(s) 2700
BsrGI TGTACA 3 cut(s) 2100, 3624, 3893
BsrI ACTGG 6 cut(s) 413, 1042, 1867, 2087, 3079, 4046
BssECI CCNNGG 6 cut(s) 49, 631, 742, 1198, 1368, 2278
BssNAI GTATAC 2 cut(s) 161, 3729
BssSI CACGAG 1 cut(s) 1206
BssT1I CCWWGG 4 cut(s) 49, 631, 742, 2278
Bst1107I GTATAC 2 cut(s) 161, 3729
Bst2BI CACGAG 1 cut(s) 1206
Bst2UI CCWGG 3 cut(s) 1199, 2586, 2916
Bst6I CTCTTC 4 cut(s) 781, 1526, 1791, 3530
BstAPI GCANNNNNTGC 1 cut(s) 3032
BstAUI TGTACA 3 cut(s) 2100, 3624, 3893
BstBAI YACGTR 1 cut(s) 1858
BstBI TTCGAA 1 cut(s) 1230
BstC8I GCNNGC 6 cut(s) 771, 780, 1134, 1504, 3389, 3463
BstDEI CTNAG 9 cut(s) 149, 169, 774, 1254, 2325, 2497, 2800, 2937, 3511
BstDSI CCRYGG 2 cut(s) 49, 631
BstENI CCTNNNNNAGG 1 cut(s) 1283
BstF5I GGATG 9 cut(s) 642, 1030, 1704, 2647, 3007, 3279, 3447, 3623, 3729
BstFNI CGCG 4 cut(s) 82, 1947, 3611, 3944
BstH2I RGCGCY 2 cut(s) 4196, 4267
BstHHI GCGC 5 cut(s) 82, 1949, 2946, 4195, 4266
BstMAI GTCTC 6 cut(s) 81, 710, 1136, 1513, 2143, 4138
BstMWI GCNNNNNNNGC 8 cut(s) 731, 775, 779, 1955, 2950, 3032, 3145, 3198
BstNI CCWGG 3 cut(s) 1199, 2586, 2916
BstNSI RCATGY 4 cut(s) 943, 2156, 2509, 3874
BstSCI CCNGG 4 cut(s) 1197, 1446, 2584, 2914
BstSFI CTRYAG 4 cut(s) 1110, 1339, 2958, 3675
BstSLI GKGCMC 1 cut(s) 2251
BstSNI TACGTA 1 cut(s) 1858
BstUI CGCG 4 cut(s) 82, 1947, 3611, 3944
BstV2I GAAGAC 1 cut(s) 823
BstX2I RGATCY 3 cut(s) 595, 1333, 4096
BstXI CCANNNNNNTGG 4 cut(s) 749, 3270, 4026, 4059
BstYI RGATCY 3 cut(s) 595, 1333, 4096
BstZ17I GTATAC 2 cut(s) 161, 3729
Bsu15I ATCGAT 1 cut(s) 318
BsuI GTATCC 1 cut(s) 3064
BsuRI GGCC 4 cut(s) 630, 725, 2584, 4046
BsuTUI ATCGAT 1 cut(s) 318
BtgI CCRYGG 2 cut(s) 49, 631
BtgZI GCGATG 2 cut(s) 1252, 3626
BtsCI GGATG 9 cut(s) 642, 1030, 1704, 2647, 3007, 3279, 3447, 3623, 3729
BtsI GCAGTG 1 cut(s) 3627
BtsIMutI CAGTG 6 cut(s) 255, 1583, 2249, 3072, 3627, 4134
Cac8I GCNNGC 6 cut(s) 771, 780, 1134, 1504, 3389, 3463
CciI TCATGA 5 cut(s) 834, 1527, 1593, 3045, 3819
CfoI GCGC 5 cut(s) 82, 1949, 2946, 4195, 4266
Cfr13I GGNCC 5 cut(s) 536, 1001, 1202, 3179, 4044
ClaI ATCGAT 1 cut(s) 318
CseI GACGC 2 cut(s) 1495, 3933
DdeI CTNAG 9 cut(s) 149, 169, 774, 1254, 2325, 2497, 2800, 2937, 3511
DraI TTTAAA 3 cut(s) 1246, 2196, 2335
DrdI GACNNNNNNGTC 1 cut(s) 827
DseDI GACNNNNNNGTC 1 cut(s) 827
EaeI YGGCCR 1 cut(s) 628
Eam1104I CTCTTC 4 cut(s) 781, 1526, 1791, 3530
EarI CTCTTC 4 cut(s) 781, 1526, 1791, 3530
Ecl136II GAGCTC 1 cut(s) 3769
Eco105I TACGTA 1 cut(s) 1858
Eco130I CCWWGG 4 cut(s) 49, 631, 742, 2278
Eco24I GRGCYC 1 cut(s) 3771
Eco32I GATATC 1 cut(s) 1032
Eco47I GGWCC 4 cut(s) 536, 1001, 1202, 3179
Eco47III AGCGCT 2 cut(s) 4194, 4265
Eco53kI GAGCTC 1 cut(s) 3769
Eco57I CTGAAG 7 cut(s) 279, 470, 1112, 2579, 2844, 3170, 3276
EcoICRI GAGCTC 1 cut(s) 3769
EcoNI CCTNNNNNAGG 1 cut(s) 1283
EcoO109I RGGNCCY 2 cut(s) 536, 1202
EcoRI GAATTC 3 cut(s) 1537, 3519, 4014
EcoRII CCWGG 3 cut(s) 1197, 2584, 2914
EcoRV GATATC 1 cut(s) 1032
EcoT14I CCWWGG 4 cut(s) 49, 631, 742, 2278
EcoT22I ATGCAT 2 cut(s) 2116, 3748
EcoT38I GRGCYC 1 cut(s) 3771
ErhI CCWWGG 4 cut(s) 49, 631, 742, 2278
Esp3I CGTCTC 1 cut(s) 1513
FalI AAGNNNNNCTT 6 cut(s) 458, 490, 604, 636, 3398, 3430
FaqI GGGAC 2 cut(s) 1407, 3568
FauI CCCGC 2 cut(s) 1648, 3147
FauNDI CATATG 1 cut(s) 1780
FbaI TGATCA 1 cut(s) 3534
FblI GTMKAC 3 cut(s) 160, 2781, 3728
FokI GGATG 9 cut(s) 649, 1037, 1711, 2654, 3014, 3286, 3434, 3630, 3736
FriOI GRGCYC 1 cut(s) 3771
GlaI GCGC 5 cut(s) 81, 1948, 2945, 4194, 4265
GsaI CCCAGC 1 cut(s) 3266
GsuI CTGGAG 2 cut(s) 430, 2104
HaeII RGCGCY 2 cut(s) 4196, 4267
HaeIII GGCC 4 cut(s) 630, 725, 2584, 4046
HapII CCGG 2 cut(s) 1139, 1448
HgaI GACGC 2 cut(s) 1495, 3933
HhaI GCGC 5 cut(s) 82, 1949, 2946, 4195, 4266
Hin6I GCGC 5 cut(s) 80, 1947, 2944, 4193, 4264
HinP1I GCGC 5 cut(s) 80, 1947, 2944, 4193, 4264
HincII GTYRAC 4 cut(s) 438, 1921, 2381, 2503
HindII GTYRAC 4 cut(s) 438, 1921, 2381, 2503
HindIII AAGCTT 8 cut(s) 63, 128, 369, 584, 1500, 1727, 2206, 3126
HinfI GANTC 9 cut(s) 295, 315, 1798, 2345, 2786, 3234, 3568, 3804, 3979
HpaI GTTAAC 1 cut(s) 1921
HpaII CCGG 2 cut(s) 1139, 1448
HphI GGTGA 9 cut(s) 157, 628, 944, 998, 1300, 2082, 2406, 2811, 4133
Hpy99I CGWCG 1 cut(s) 1057
HpyCH4IV ACGT 5 cut(s) 757, 870, 1601, 1857, 3282
HpyF10VI GCNNNNNNNGC 8 cut(s) 731, 775, 779, 1955, 2950, 3032, 3145, 3198
HpyF3I CTNAG 9 cut(s) 149, 169, 774, 1254, 2325, 2497, 2800, 2937, 3511
HpySE526I ACGT 5 cut(s) 757, 870, 1601, 1857, 3282
HspAI GCGC 5 cut(s) 80, 1947, 2944, 4193, 4264
KpnI GGTACC 1 cut(s) 2704
Ksp22I TGATCA 1 cut(s) 3534
KspAI GTTAAC 1 cut(s) 1921
LguI GCTCTTC 1 cut(s) 1791
LmnI GCTCC 2 cut(s) 3581, 3774
MaeII ACGT 5 cut(s) 757, 870, 1601, 1857, 3282
MfeI CAATTG 2 cut(s) 330, 3762
MflI RGATCY 3 cut(s) 595, 1333, 4096
MhlI GDGCHC 2 cut(s) 2251, 3771
MlsI TGGCCA 1 cut(s) 630
MluNI TGGCCA 1 cut(s) 630
MlyI GAGTC 3 cut(s) 2795, 3243, 3813
MmeI TCCRAC 7 cut(s) 292, 730, 979, 1814, 1861, 3258, 3694
Mox20I TGGCCA 1 cut(s) 630
Mph1103I ATGCAT 2 cut(s) 2116, 3748
MscI TGGCCA 1 cut(s) 630
Msp20I TGGCCA 1 cut(s) 630
MspI CCGG 2 cut(s) 1139, 1448
MspR9I CCNGG 4 cut(s) 1199, 1448, 2586, 2916
MunI CAATTG 2 cut(s) 330, 3762
Mva1269I GAATGC 2 cut(s) 2116, 4220
MvaI CCWGG 3 cut(s) 1199, 2586, 2916
MvnI CGCG 4 cut(s) 82, 1947, 3611, 3944
MwoI GCNNNNNNNGC 8 cut(s) 731, 775, 779, 1955, 2950, 3032, 3145, 3198
NciI CCSGG 1 cut(s) 1448
NcoI CCATGG 2 cut(s) 49, 631
NdeI CATATG 1 cut(s) 1780
NheI GCTAGC 2 cut(s) 769, 778
NlaIV GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2702, 3180, 3577
NmeAIII GCCGAG 2 cut(s) 410, 1393
NmuCI GTSAC 4 cut(s) 616, 874, 1288, 3805
NsiI ATGCAT 2 cut(s) 2116, 3748
NspI RCATGY 4 cut(s) 943, 2156, 2509, 3874
NspV TTCGAA 1 cut(s) 1230
PagI TCATGA 5 cut(s) 834, 1527, 1593, 3045, 3819
PciI ACATGT 3 cut(s) 939, 2152, 3870
PciSI GCTCTTC 1 cut(s) 1791
PctI GAATGC 2 cut(s) 2116, 4220
PfeI GAWTC 6 cut(s) 295, 315, 1798, 2345, 3568, 3979
PflMI CCANNNNNTGG 3 cut(s) 209, 1880, 3457
PleI GAGTC 3 cut(s) 2794, 3242, 3812
PpsI GAGTC 3 cut(s) 2794, 3242, 3812
Ppu21I YACGTR 1 cut(s) 1858
PpuMI RGGWCCY 2 cut(s) 536, 1202
PscI ACATGT 3 cut(s) 939, 2152, 3870
PshBI ATTAAT 2 cut(s) 2117, 2427
PsiI TTATAA 5 cut(s) 141, 506, 624, 1724, 3258
Psp124BI GAGCTC 1 cut(s) 3771
Psp1406I AACGTT 1 cut(s) 1601
Psp5II RGGWCCY 2 cut(s) 536, 1202
Psp6I CCWGG 3 cut(s) 1197, 2584, 2914
PspFI CCCAGC 1 cut(s) 3262
PspGI CCWGG 3 cut(s) 1197, 2584, 2914
PspN4I GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2702, 3180, 3577
PspPI GGNCC 5 cut(s) 536, 1001, 1202, 3179, 4044
PspPPI RGGWCCY 2 cut(s) 536, 1202
PstI CTGCAG 1 cut(s) 1114
PsuI RGATCY 3 cut(s) 595, 1333, 4096
SacI GAGCTC 1 cut(s) 3771
SapI GCTCTTC 1 cut(s) 1791
Sau96I GGNCC 5 cut(s) 536, 1001, 1202, 3179, 4044
SchI GAGTC 3 cut(s) 2795, 3243, 3813
ScrFI CCNGG 4 cut(s) 1199, 1448, 2586, 2916
SduI GDGCHC 2 cut(s) 2251, 3771
SfcI CTRYAG 4 cut(s) 1110, 1339, 2958, 3675
SfuI TTCGAA 1 cut(s) 1230
SinI GGWCC 4 cut(s) 536, 1001, 1202, 3179
SmiI ATTTAAAT 1 cut(s) 1246
SmlI CTYRAG 3 cut(s) 290, 1220, 1510
SmoI CTYRAG 3 cut(s) 290, 1220, 1510
SnaBI TACGTA 1 cut(s) 1858
SsiI CCGC 5 cut(s) 1655, 1945, 2571, 3154, 3716
SspI AATATT 3 cut(s) 1316, 2994, 3215
SstI GAGCTC 1 cut(s) 3771
StyD4I CCNGG 4 cut(s) 1197, 1446, 2584, 2914
StyI CCWWGG 4 cut(s) 49, 631, 742, 2278
SwaI ATTTAAAT 1 cut(s) 1246
TaiI ACGT 5 cut(s) 760, 873, 1604, 1860, 3285
TatI WGTACW 5 cut(s) 2100, 2155, 2796, 3624, 3893
TauI GCSGC 1 cut(s) 3719
TfiI GAWTC 6 cut(s) 295, 315, 1798, 2345, 3568, 3979
TscAI CASTG 6 cut(s) 262, 1590, 2256, 3072, 3634, 4134
TseFI GTSAC 4 cut(s) 616, 874, 1288, 3805
Tsp45I GTSAC 4 cut(s) 616, 874, 1288, 3805
TspRI CASTG 6 cut(s) 262, 1590, 2256, 3072, 3634, 4134
Van91I CCANNNNNTGG 3 cut(s) 209, 1880, 3457
VneI GTGCAC 1 cut(s) 2247
VpaK11BI GGWCC 4 cut(s) 536, 1001, 1202, 3179
VspI ATTAAT 2 cut(s) 2117, 2427
XagI CCTNNNNNAGG 1 cut(s) 1283
XbaI TCTAGA 1 cut(s) 4099
XceI RCATGY 4 cut(s) 943, 2156, 2509, 3874
XcmI CCANNNNNNNNNTGG 1 cut(s) 565
XmiI GTMKAC 3 cut(s) 160, 2781, 3728
Zsp2I ATGCAT 2 cut(s) 2116, 3748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.