MD17G1201000.v1.1
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
24288197 .. 24295778
7582 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1201000.v1.1.491

Sequence Viewer

Length: 4281 bp
ATGGACACAAGAAATCATATTTACGAAGCAAGTCAGAGTTTTCGAGCAAACAGTTCTTCGGTTTGGAGGGACACTGGTATGGAAGTTTTCTCGAGGCCGTCCATGACTTCCAACCATGAAGATGAAGAAGAAGACCTCAAGTGGGCTGCACTTGAAAGACTTCCCACATTCAACCGTTTAAAGAAAGGTTTGCTCACTTCTTCAAGCGGCGAGGCAAGTGAAGTTGATGTCCGTAAACTTGGGTTTCAAGAAAGGAATAATTTAATTCAGAGGCTTGTGAAAGATACCGAAACCCAGAACGAGAAGTTCTTAATGAGGCTGAGAGAGCGACTCGATAGAGCTGGAGTGGAAATTCCAGCACTGGAGGTAAGATACGAGCATGTCAAAGTTGATGCAGAAGCTCATGTAGGAACAAGGGCGTTGCCTTCATTCTTTAACTTTTACATTAATTTTTTTGAGGGCATCTTGTCTAGTCTCCACTTGCTTAAGAGTAGGAAGAAACACGTGTCTATCCTCCGTGATCTTAGTGGAATCATTAGGCCTAGCAGAATAACATTGCTTTTAGGTCCTCCAAGTTCTGGAAGGACCTCGTTATTGCTGGCTCTTGCCGGGAAGCTTTCGCCAGATGTAGAGTTCTCAGGGAAGGTGACATACAATGGCCTTGACATGAATGAATCTGCACCTTGGAGAGCTTCTGCCTACATCAGTCAGCATGATATCCATAATCCTGAAATGACTGTAAGAGAAACCTTGTCCTTCTCTTCTAGATGCCAGGGGGTCGGACATCGTCATGAATGGTTAGCAGAACTGTCAAGGAGAGAGAAAGCAGCAAATATTCAGCCTGATCCTGATATTGATGTCTTCATGAAGGCATCAGCTTTACAAGGCCAGAAGGCAAATGTTTTCACAGATTATGTTCTGAAGATTTTAGGACTAGACATATGTGCAGAAACCATGGTCGGGGATGGAATGCTAAGGGGTATTTCGGGTGGTCAAAAGAAGCGTGTCACAACCGGTGAGATGCTGGTTGGACCGGCAAAGGTTCTGTTCATGGATGAGATTTCTACTGGTTTGGACAGCTCAACAACTTATCAAATTGTGAACTCACTTAGGCAATCCATGCACATTCTCAACGGAACTGCTGTTATTGCTCTACTCCAGCCGCCACCAGAAACTTATAACCTTTTTGATGACATTATACTCCTCTCCGATGGTCAAATTGTGTACCAGGGGCCCCGTGAACACGTGCTAGAGTTTTTTGAGTCCTTAGGCTTCAAATGTCCTGAAAGAAAAGGCGTGGCCGATTTTCTGCAGGAAGTGACTTCAGAGAAAGATCAGGAGCAATATTGGGCTCATAGGGATAAGGCTTACAAATTTGTCACGGTCAAGGAATTCACTGATACATTTCAGTCTTTCCATGTTGGGAAGAAAATAAAAGAGGACCTTTCGGTTCCATTTGACAAGAGTGACAAGGGTGCAGAACTTTTGGCTCCCCAAAAATATGGTGTTGGAAAGAAAGAACTGCTTAAAGCCTGCATGTCAAGAGAATACTTGCTAATGAAGAGGAACTCATTCGTCTATGTATTCAAGTTTGTACAGCTTATAGTGATGGCATTCATTACAATGACACTCTTCATACGGACAAGGATGCATCGAGATTCAATAACAGATGGAGGCATTTTCACTGGTGCCTTATTTTTCTGTATGATAATGGTCATGTTCAACGGAATGTCTGAGCTCAGTTTGACCATTGCCAAGCTTTCTGTTTTTTACAAGCAAAGGGACCTCATGTTTTTCCCTGCCTGGGCGTATGCACTTCCCGGATGGTTGATCAAGGTTCCCCTCTCATTCGTGGAAGTTGCAATTTGGGTTTTCATGACGTACTACGTCATTGGTTTCGATCCAAATGTGCATAGGTTGTTTAGACAATACTTTATATTCATACTTGTCCATCAAATGGCTTCTGGATTATTCCGACTTATTGCAGCACTTGGTAGGAATATGGTTATTGCTACCACAGGCGGATCATTTGCACTACTAGTACTCTTTGTAAACGGTGGCTTTGTTCTTTCAAGAGTGGATATAAAGAAATGGTGGATATGGGCTTACTGGATATCACCAATGATGTATGCGCAGAATGCAGTGGAAGTAAACGAGTTCCTAGGGAATAGCTGGAAACATGTTCTTCCAAACACAGAACAGCCATTGGGAATTTTGGTTTTGAAGTCTAGAGGATTCTTTACAGAACAACGTTGGTATTGGATAGGAGTTGGGGGCCTGATTGGATTTATAATATTATTCAACTTGGCTTATGTCTTGGCCCTCACTTATCTCGACTCTTATGACAAGGCTCAGAGTAGTCAATTGGACGAATCTCAAGAAAATGAACAAGCTCAAAAAACTGCAAATGAAGGGAACAAAGCTAGCGCTGAGATAAACTCCAGTAAGAAAAAAGGAATGACTCTTCCATTTCAACAACAATCTCTCACCTTTAATGACATTGTGTACTCTGTTGACATGCCACCGGAAATGAAGAATCAGGGTGTCAGTGAGGATAAGCTGGTGCTTTTGAAGGGTGTGAGCGGTGCTTTCAGGCCTGGCGTCCTCACCGCTTTGATGGGTGTCAGTGGTGCTGGTAAAACTACTCTCATGGATGTGCTAGCTGGTAGGAAAACTGGGGGTTATATTGACGGTGACATCAAAATTTCTGGATATCCCAAAAAGCAAGAAACCTTTGCTCGTATTTCAGGATACTGTGAACAAAATGACATCCATTCTCCTCATGTTACTGTCTATGAGTCTTTGCTTTTTTCTGCTTGGCTCCGCCTACCCTCTGAAGTCAATTCTACAACAAGAAAGATGTTTGTGGAGGAGGTGATGGAGCTTGTGGAACTAAAACCTTTGCGGAAAGCGCTAGTTGGCTTGCCAGGTGTGAATGGTCTCTCGACTGAGCAACGGAAGAGGCTCACCATTGCTGTTGAACTAGTGGCAAACCCTTCCATAATATTCATGGACGAGCCAACTTCGGGGCTAGATGCTAGAGCTGCTGCAATTGTCATGAGAACAGTTAGGAACACAGTGGACACTGGAAGAACAGTTGTCTGCACCATTCATCAGCCAAGCATCGACATATTTGAATCTTTTGATGAGTTATTGTTGATGAAGCGTGGAGGAGAAGAAATATATGTAGGGCCTTTAGGTCACCATTCTTGTGATTTGATCAAGTATTTTGAGGACATTGAAGGAGTCAGTAAAATTAAAGGTGATTACAACCCTGCAACTTGGATGTTGGAAGTTAGCTCTTATGCACAAGAACAAGCTTTGGGAGTTGATTTCTCCAAAGTGTACAAAAATTCTGAACTGTATCGGAGAAACAAAGAACTTATTAGGCAACTGAGCACGCCTCCTCCCGATTGCAGCGATCTCCATTTCCCTTCTCAATACTCTCAATCATTTTATGCTCAATGCATAGCATGCTTTTGGAAACAAAGATTGTCATATTGGCGCAATCCACCATACACTGCTGTAAGATTTTTGTTCACAGCTATCATAGCCATCATGTTTGGCACAATGTTCTGGGACCTGGGCTCCAAAACGAAAAAGCAGCAAGACCTGTTTAATGCAATGGGCTGTATGTATTGTGCTGTTCAATTCATTGGAATCCAAAATGCTGGTAGTGTGCAGCCAGTCGTTTCAGTTGAACGAACGGTTTTCTACAGAGAAAAAGCTGCTGGAATGTATTCACCCTTAGCGTATGCCTTTGCACAGATTATAATTGAGCTCCCGTACATTTTTATCCAAACTCTGGTTTACGCTGTCATCGTGTACTCCATGATGGGACATCAATGGACTGCTGCTAAATTCTTTTGGTATTTGTTCTTCATGTACTTCACATTGTTATATTTCACCTTTTATGGGATGATGGCCGTGGCTGTGACGCCAAATTTCCACATTGCTACTATAATTTCCTCCGCATTTTATGGAGTGTGGAACCTCTTTTCCGGATTTATTGTCCCGCGAACTAGAATGCCCGTGTGGTGGAGATGGTACTATTATATATGTCCAGTTTCTTGGACCTTATATGGACTAGTTATATCACAGTATGGAGATATGGACGACATGCTTGACAATGGTGTAACAGTTAAACAGTTTTTGAAAAGTTATTTCGGCTTCGAACACAAGTTTCTAGGACCAGTTGCAGGTATTGTTACAGCGTTTGTTATTCTCTTCGGACTTATTTTTGCCGTTTCCATCAAGGTTTTCAATTTCCAGAAGAGATAG

Protein Analysis

1427

Amino Acids

162.05

Weight (kDa)

8.47

Isoelectric Point (pI)

38.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 172 - 354 8.8e-15 ABC transporter
ABC2_membrane_7 PF19055 387 - 438 3.4e-06 ABC-2 type transporter
ABC2_membrane PF01061 508 - 720 5.7e-47 ABC-2 type transporter
PDR_assoc PF08370 725 - 786 1.4e-24 Plant PDR ABC transporter associated
ABC_tran PF00005 857 - 1009 1.6e-20 ABC transporter
ABC2_membrane PF01061 1155 - 1368 2.1e-62 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1179, 2291, 3773
Acc16I TGCGCA 1 cut(s) 2133
Acc36I ACCTGC 1 cut(s) 4190
AccB1I GGYRCC 1 cut(s) 1688
AccB7I CCANNNNNTGG 3 cut(s) 578, 1957, 3805
AccBSI CCGCTC 1 cut(s) 2583
AccII CGCG 1 cut(s) 4018
AccIII TCCGGA 1 cut(s) 4001
AciI CCGC 9 cut(s) 207, 1163, 2022, 2583, 2610, 2824, 2905, 3972, 4016
AclI AACGTT 1 cut(s) 2251
AclWI GGATC 3 cut(s) 839, 1895, 2032
AcoI YGGCCR 2 cut(s) 1299, 3924
AcsI RAATTY 8 cut(s) 351, 1373, 1391, 2211, 2703, 3352, 3860, 3943
AcuI CTGAAG 3 cut(s) 941, 1308, 2856
AcvI CACGTG 2 cut(s) 505, 1246
AcyI GRCGYC 2 cut(s) 2601, 3938
AfeI AGCGCT 2 cut(s) 2428, 2913
AflII CTTAAG 1 cut(s) 485
AflIII ACRYGT 4 cut(s) 502, 504, 1243, 2179
AgeI ACCGGT 1 cut(s) 1013
AhlI ACTAGT 3 cut(s) 2038, 2983, 4087
AjnI CCWGG 6 cut(s) 771, 1227, 1802, 2596, 2926, 3582
AloI GAACNNNNNNTCC 2 cut(s) 3983, 4015
Alw21I GWGCWC 3 cut(s) 1740, 3401, 3783
Alw26I GTCTC 2 cut(s) 479, 2945
AlwI GGATC 3 cut(s) 839, 1895, 2032
Ama87I CYCGRG 1 cut(s) 91
Aor13HI TCCGGA 1 cut(s) 4001
Aor51HI AGCGCT 2 cut(s) 2428, 2913
ApaI GGGCCC 1 cut(s) 1236
ApoI RAATTY 8 cut(s) 351, 1373, 1391, 2211, 2703, 3352, 3860, 3943
AseI ATTAAT 1 cut(s) 447
AsiGI ACCGGT 1 cut(s) 1013
Asp700I GAANNNNTTC 3 cut(s) 159, 1571, 3739
AspA2I CCTAGG 1 cut(s) 2161
AspLEI GCGC 4 cut(s) 2134, 2429, 2914, 3507
AsuC2I CCSGG 2 cut(s) 610, 1821
AsuII TTCGAA 1 cut(s) 4173
AsuNHI GCTAGC 2 cut(s) 2423, 2659
AvaI CYCGRG 1 cut(s) 91
AvaII GGWCC 8 cut(s) 566, 585, 1031, 1441, 1783, 3580, 4074, 4190
AvrII CCTAGG 1 cut(s) 2161
AxyI CCTNAGG 1 cut(s) 1267
BaeGI GKGCMC 1 cut(s) 1236
BanI GGYRCC 1 cut(s) 1688
BanII GRGCYC 5 cut(s) 1236, 1354, 1740, 3590, 3783
BarI GAAGNNNNNNTAC 4 cut(s) 635, 667, 3863, 3895
BbrPI CACGTG 2 cut(s) 505, 1246
BbsI GAAGAC 2 cut(s) 138, 853
Bbv12I GWGCWC 3 cut(s) 1740, 3401, 3783
BceAI ACGGC 3 cut(s) 82, 3911, 4229
BciT130I CCWGG 6 cut(s) 773, 1229, 1804, 2598, 2928, 3584
BciVI GTATCC 1 cut(s) 2744
BclI TGATCA 2 cut(s) 1830, 3219
BcnI CCSGG 2 cut(s) 610, 1821
BcoDI GTCTC 2 cut(s) 479, 2945
BcuI ACTAGT 3 cut(s) 2038, 2983, 4087
BfmI CTRYAG 2 cut(s) 1310, 3715
BfoI RGCGCY 2 cut(s) 2430, 2915
BfrI CTTAAG 1 cut(s) 485
BfuAI ACCTGC 1 cut(s) 4190
BfuI GTATCC 1 cut(s) 2744
BlnI CCTAGG 1 cut(s) 2161
BmcAI AGTACT 1 cut(s) 2043
Bme1390I CCNGG 8 cut(s) 610, 773, 1229, 1804, 1821, 2598, 2928, 3584
Bme18I GGWCC 8 cut(s) 566, 585, 1031, 1441, 1783, 3580, 4074, 4190
BmeT110I CYCGRG 1 cut(s) 91
BmrFI CCNGG 8 cut(s) 610, 773, 1229, 1804, 1821, 2598, 2928, 3584
BmrI ACTGGG 1 cut(s) 2685
BmsI GCATC 9 cut(s) 382, 471, 758, 881, 1011, 1638, 1660, 3025, 3132
BmtI GCTAGC 2 cut(s) 2427, 2663
BmuI ACTGGG 1 cut(s) 2685
BpiI GAAGAC 2 cut(s) 138, 853
BplI GAGNNNNNCTC 6 cut(s) 315, 347, 2423, 2455, 3388, 3420
BpmI CTGGAG 4 cut(s) 363, 383, 1142, 2425
Bpu10I CCTNAGC 2 cut(s) 974, 3748
Bpu14I TTCGAA 1 cut(s) 4173
BpuEI CTTGAG 2 cut(s) 122, 2361
BpuMI CCSGG 2 cut(s) 610, 1821
BsaAI YACGTR 2 cut(s) 505, 1246
BsaHI GRCGYC 2 cut(s) 2601, 3938
BsaI GGTCTC 1 cut(s) 2945
BsaJI CCNNGG 8 cut(s) 683, 772, 954, 1228, 1803, 2161, 3583, 3927
BsaWI WCCGGW 3 cut(s) 1013, 2524, 4001
BsaXI ACNNNNNCTCC 4 cut(s) 3391, 3421, 3572, 3602
Bse118I RCCGGY 2 cut(s) 1013, 1033
Bse21I CCTNAGG 1 cut(s) 1267
Bse3DI GCAATG 5 cut(s) 554, 1749, 2970, 3630, 3951
BseAI TCCGGA 1 cut(s) 4001
BseBI CCWGG 6 cut(s) 773, 1229, 1804, 2598, 2928, 3584
BseDI CCNNGG 8 cut(s) 683, 772, 954, 1228, 1803, 2161, 3583, 3927
BseGI GGATG 8 cut(s) 970, 1060, 1653, 1829, 2659, 2769, 3291, 3924
BseMI GCAATG 5 cut(s) 554, 1749, 2970, 3630, 3951
BseMII CTCAG 8 cut(s) 311, 651, 1725, 1753, 2366, 2421, 2940, 3386
BseRI GAGGAG 5 cut(s) 1193, 2769, 2885, 3186, 3396
BseSI GKGCMC 1 cut(s) 1236
BsgI GTGCAG 6 cut(s) 132, 663, 966, 1497, 3088, 3701
Bsh1236I CGCG 1 cut(s) 4018
BshNI GGYRCC 1 cut(s) 1688
BshTI ACCGGT 1 cut(s) 1013
BsiHKAI GWGCWC 3 cut(s) 1740, 3401, 3783
BsiHKCI CYCGRG 1 cut(s) 91
BsiSI CCGG 6 cut(s) 609, 1014, 1034, 1821, 2525, 4002
BslFI GGGAC 5 cut(s) 83, 1796, 3593, 3852, 3998
BsmAI GTCTC 2 cut(s) 479, 2945
BsmFI GGGAC 5 cut(s) 83, 1796, 3593, 3852, 3998
BsmI GAATGC 4 cut(s) 975, 1613, 2143, 4032
Bso31I GGTCTC 1 cut(s) 2945
BsoBI CYCGRG 1 cut(s) 91
Bsp119I TTCGAA 1 cut(s) 4173
Bsp120I GGGCCC 1 cut(s) 1232
Bsp1286I GDGCHC 6 cut(s) 1236, 1354, 1740, 3401, 3590, 3783
Bsp13I TCCGGA 1 cut(s) 4001
Bsp1407I TGTACA 2 cut(s) 1594, 3345
Bsp143I GATC 8 cut(s) 520, 844, 1333, 1830, 1900, 2024, 3219, 3421
Bsp19I CCATGG 1 cut(s) 954
BspACI CCGC 9 cut(s) 207, 1163, 2022, 2583, 2610, 2824, 2905, 3972, 4016
BspCNI CTCAG 8 cut(s) 312, 650, 1726, 1752, 2365, 2422, 2941, 3387
BspEI TCCGGA 1 cut(s) 4001
BspFNI CGCG 1 cut(s) 4018
BspHI TCATGA 4 cut(s) 790, 864, 1875, 3057
BspMAI CTGCAG 1 cut(s) 1314
BspMI ACCTGC 1 cut(s) 4190
BspOI GCTAGC 2 cut(s) 2427, 2663
BspPI GGATC 3 cut(s) 839, 1895, 2032
BspT104I TTCGAA 1 cut(s) 4173
BspT107I GGYRCC 1 cut(s) 1688
BspTI CTTAAG 1 cut(s) 485
BspTNI GGTCTC 1 cut(s) 2945
BsrBI CCGCTC 1 cut(s) 2583
BsrDI GCAATG 5 cut(s) 554, 1749, 2970, 3630, 3951
BsrFI RCCGGY 2 cut(s) 1013, 1033
BsrGI TGTACA 2 cut(s) 1594, 3345
BssAI RCCGGY 2 cut(s) 1013, 1033
BssECI CCNNGG 8 cut(s) 683, 772, 954, 1228, 1803, 2161, 3583, 3927
BssMI GATC 8 cut(s) 520, 844, 1333, 1830, 1900, 2024, 3219, 3421
BssNI GRCGYC 2 cut(s) 2601, 3938
BssT1I CCWWGG 3 cut(s) 683, 954, 2161
Bst2UI CCWGG 6 cut(s) 773, 1229, 1804, 2598, 2928, 3584
Bst6I CTCTTC 7 cut(s) 766, 1556, 1637, 2469, 2954, 4232, 4268
BstACI GRCGYC 2 cut(s) 2601, 3938
BstAFI CTTAAG 1 cut(s) 485
BstAPI GCANNNNNTGC 2 cut(s) 1120, 3474
BstAUI TGTACA 2 cut(s) 1594, 3345
BstBAI YACGTR 2 cut(s) 505, 1246
BstBI TTCGAA 1 cut(s) 4173
BstC8I GCNNGC 7 cut(s) 600, 1534, 2425, 2661, 2924, 3401, 3475
BstDSI CCRYGG 2 cut(s) 954, 3927
BstEII GGTNACC 1 cut(s) 3200
BstF5I GGATG 8 cut(s) 970, 1060, 1653, 1829, 2659, 2769, 3291, 3924
BstFNI CGCG 1 cut(s) 4018
BstH2I RGCGCY 2 cut(s) 2430, 2915
BstHHI GCGC 4 cut(s) 2134, 2429, 2914, 3507
BstKTI GATC 8 cut(s) 523, 847, 1336, 1833, 1903, 2027, 3222, 3424
BstMAI GTCTC 2 cut(s) 479, 2945
BstMBI GATC 8 cut(s) 520, 844, 1333, 1830, 1900, 2024, 3219, 3421
BstMWI GCNNNNNNNGC 8 cut(s) 325, 1120, 1148, 2138, 2911, 3044, 3474, 3551
BstNI CCWGG 6 cut(s) 773, 1229, 1804, 2598, 2928, 3584
BstNSI RCATGY 6 cut(s) 383, 1540, 2183, 2521, 3477, 4123
BstPI GGTNACC 1 cut(s) 3200
BstSCI CCNGG 8 cut(s) 608, 771, 1227, 1802, 1819, 2596, 2926, 3582
BstSFI CTRYAG 2 cut(s) 1310, 3715
BstSLI GKGCMC 1 cut(s) 1236
BstUI CGCG 1 cut(s) 4018
BstV2I GAAGAC 2 cut(s) 138, 853
BstXI CCANNNNNNTGG 3 cut(s) 1502, 3671, 4071
Bsu36I CCTNAGG 1 cut(s) 1267
BsuI GTATCC 1 cut(s) 2744
BtgI CCRYGG 2 cut(s) 954, 3927
BtsCI GGATG 8 cut(s) 970, 1060, 1653, 1829, 2659, 2769, 3291, 3924
BtsI GCAGTG 2 cut(s) 2148, 3519
BveI ACCTGC 1 cut(s) 4190
Cac8I GCNNGC 7 cut(s) 600, 1534, 2425, 2661, 2924, 3401, 3475
CciI TCATGA 4 cut(s) 790, 864, 1875, 3057
CfoI GCGC 4 cut(s) 2134, 2429, 2914, 3507
Cfr10I RCCGGY 2 cut(s) 1013, 1033
CseI GACGC 2 cut(s) 2590, 3946
CspAI ACCGGT 1 cut(s) 1013
DpnI GATC 8 cut(s) 522, 846, 1335, 1832, 1902, 2026, 3221, 3423
DpnII GATC 8 cut(s) 520, 844, 1333, 1830, 1900, 2024, 3219, 3421
DraI TTTAAA 1 cut(s) 180
EaeI YGGCCR 2 cut(s) 1299, 3924
Eam1104I CTCTTC 7 cut(s) 766, 1556, 1637, 2469, 2954, 4232, 4268
EarI CTCTTC 7 cut(s) 766, 1556, 1637, 2469, 2954, 4232, 4268
EciI GGCGGA 2 cut(s) 2037, 2813
Ecl136II GAGCTC 2 cut(s) 1738, 3781
Eco130I CCWWGG 3 cut(s) 683, 954, 2161
Eco147I AGGCCT 2 cut(s) 541, 2596
Eco24I GRGCYC 5 cut(s) 1236, 1354, 1740, 3590, 3783
Eco31I GGTCTC 1 cut(s) 2945
Eco32I GATATC 3 cut(s) 718, 2115, 2714
Eco47I GGWCC 8 cut(s) 566, 585, 1031, 1441, 1783, 3580, 4074, 4190
Eco47III AGCGCT 2 cut(s) 2428, 2913
Eco53kI GAGCTC 2 cut(s) 1738, 3781
Eco57I CTGAAG 3 cut(s) 941, 1308, 2856
Eco72I CACGTG 2 cut(s) 505, 1246
Eco81I CCTNAGG 1 cut(s) 1267
Eco88I CYCGRG 1 cut(s) 91
Eco91I GGTNACC 1 cut(s) 3200
EcoICRI GAGCTC 2 cut(s) 1738, 3781
EcoO109I RGGNCCY 9 cut(s) 566, 585, 1232, 1233, 1441, 1783, 2275, 3191, 3580
EcoO65I GGTNACC 1 cut(s) 3200
EcoRI GAATTC 1 cut(s) 1391
EcoRII CCWGG 6 cut(s) 771, 1227, 1802, 2596, 2926, 3582
EcoRV GATATC 3 cut(s) 718, 2115, 2714
EcoT14I CCWWGG 3 cut(s) 683, 954, 2161
EcoT22I ATGCAT 2 cut(s) 1653, 3470
EcoT38I GRGCYC 5 cut(s) 1236, 1354, 1740, 3590, 3783
ErhI CCWWGG 3 cut(s) 683, 954, 2161
FalI AAGNNNNNCTT 4 cut(s) 1428, 1460, 1509, 1541
FaqI GGGAC 5 cut(s) 83, 1796, 3593, 3852, 3998
FauI CCCGC 1 cut(s) 4023
FauNDI CATATG 1 cut(s) 941
FbaI TGATCA 2 cut(s) 1830, 3219
FokI GGATG 8 cut(s) 977, 1067, 1660, 1836, 2666, 2756, 3298, 3931
FriOI GRGCYC 5 cut(s) 1236, 1354, 1740, 3590, 3783
FspI TGCGCA 1 cut(s) 2133
GlaI GCGC 4 cut(s) 2133, 2428, 2913, 3506
GsuI CTGGAG 4 cut(s) 363, 383, 1142, 2425
HaeII RGCGCY 2 cut(s) 2430, 2915
HapII CCGG 6 cut(s) 609, 1014, 1034, 1821, 2525, 4002
HgaI GACGC 2 cut(s) 2590, 3946
HhaI GCGC 4 cut(s) 2134, 2429, 2914, 3507
Hin1I GRCGYC 2 cut(s) 2601, 3938
Hin6I GCGC 4 cut(s) 2132, 2427, 2912, 3505
HinP1I GCGC 4 cut(s) 2132, 2427, 2912, 3505
HincII GTYRAC 1 cut(s) 2515
HindII GTYRAC 1 cut(s) 2515
HindIII AAGCTT 3 cut(s) 614, 1757, 3318
HpaII CCGG 6 cut(s) 609, 1014, 1034, 1821, 2525, 4002
HpyCH4IV ACGT 5 cut(s) 504, 1245, 1880, 1887, 2251
HpyF10VI GCNNNNNNNGC 8 cut(s) 325, 1120, 1148, 2138, 2911, 3044, 3474, 3551
HpySE526I ACGT 5 cut(s) 504, 1245, 1880, 1887, 2251
Hsp92I GRCGYC 2 cut(s) 2601, 3938
HspAI GCGC 4 cut(s) 2132, 2427, 2912, 3505
Kpn2I TCCGGA 1 cut(s) 4001
Ksp22I TGATCA 2 cut(s) 1830, 3219
Kzo9I GATC 8 cut(s) 520, 844, 1333, 1830, 1900, 2024, 3219, 3421
LmnI GCTCC 6 cut(s) 1339, 1495, 2826, 2881, 3593, 3786
LweI GCATC 9 cut(s) 382, 471, 758, 881, 1011, 1638, 1660, 3025, 3132
MaeII ACGT 5 cut(s) 504, 1245, 1880, 1887, 2251
MalI GATC 8 cut(s) 522, 846, 1335, 1832, 1902, 2026, 3221, 3423
MbiI CCGCTC 1 cut(s) 2583
MboI GATC 8 cut(s) 520, 844, 1333, 1830, 1900, 2024, 3219, 3421
MfeI CAATTG 2 cut(s) 2363, 3051
MhlI GDGCHC 6 cut(s) 1236, 1354, 1740, 3401, 3590, 3783
MlyI GAGTC 6 cut(s) 324, 1271, 2330, 2455, 2807, 3255
MmeI TCCRAC 6 cut(s) 135, 760, 1009, 1489, 1999, 3270
Mph1103I ATGCAT 2 cut(s) 1653, 3470
MroI TCCGGA 1 cut(s) 4001
MroXI GAANNNNTTC 3 cut(s) 159, 1571, 3739
MslI CAYNNNNRTG 6 cut(s) 77, 120, 789, 1622, 2654, 3210
MspCI CTTAAG 1 cut(s) 485
MspI CCGG 6 cut(s) 609, 1014, 1034, 1821, 2525, 4002
MspR9I CCNGG 8 cut(s) 610, 773, 1229, 1804, 1821, 2598, 2928, 3584
MunI CAATTG 2 cut(s) 2363, 3051
Mva1269I GAATGC 4 cut(s) 975, 1613, 2143, 4032
MvaI CCWGG 6 cut(s) 773, 1229, 1804, 2598, 2928, 3584
MvnI CGCG 1 cut(s) 4018
MwoI GCNNNNNNNGC 8 cut(s) 325, 1120, 1148, 2138, 2911, 3044, 3474, 3551
NciI CCSGG 2 cut(s) 610, 1821
NcoI CCATGG 1 cut(s) 954
NdeI CATATG 1 cut(s) 941
NdeII GATC 8 cut(s) 520, 844, 1333, 1830, 1900, 2024, 3219, 3421
NheI GCTAGC 2 cut(s) 2423, 2659
NmuCI GTSAC 8 cut(s) 646, 1006, 1318, 1378, 1466, 2693, 3200, 3934
NsbI TGCGCA 1 cut(s) 2133
NsiI ATGCAT 2 cut(s) 1653, 3470
NspI RCATGY 6 cut(s) 383, 1540, 2183, 2521, 3477, 4123
NspV TTCGAA 1 cut(s) 4173
PaeI GCATGC 1 cut(s) 3477
PaeR7I CTCGAG 1 cut(s) 91
PagI TCATGA 4 cut(s) 790, 864, 1875, 3057
PceI AGGCCT 2 cut(s) 541, 2596
PciI ACATGT 1 cut(s) 2179
PcsI WCGNNNNNNNCGW 1 cut(s) 3819
PctI GAATGC 4 cut(s) 975, 1613, 2143, 4032
PdmI GAANNNNTTC 3 cut(s) 159, 1571, 3739
PfeI GAWTC 8 cut(s) 531, 674, 1658, 2235, 2372, 2536, 3137, 3660
PflFI GACNNNGTC 1 cut(s) 786
PflMI CCANNNNNTGG 3 cut(s) 578, 1957, 3805
PfoI TCCNGGA 1 cut(s) 1819
PinAI ACCGGT 1 cut(s) 1013
PleI GAGTC 6 cut(s) 324, 1270, 2330, 2455, 2806, 3254
PmaCI CACGTG 2 cut(s) 505, 1246
PmlI CACGTG 2 cut(s) 505, 1246
PpsI GAGTC 6 cut(s) 324, 1270, 2330, 2455, 2806, 3254
Ppu21I YACGTR 2 cut(s) 505, 1246
PpuMI RGGWCCY 5 cut(s) 566, 585, 1441, 1783, 3580
PscI ACATGT 1 cut(s) 2179
PshBI ATTAAT 1 cut(s) 447
PsiI TTATAA 3 cut(s) 1179, 2291, 3773
Psp124BI GAGCTC 2 cut(s) 1740, 3783
Psp1406I AACGTT 1 cut(s) 2251
Psp5II RGGWCCY 5 cut(s) 566, 585, 1441, 1783, 3580
Psp6I CCWGG 6 cut(s) 771, 1227, 1802, 2596, 2926, 3582
PspCI CACGTG 2 cut(s) 505, 1246
PspEI GGTNACC 1 cut(s) 3200
PspGI CCWGG 6 cut(s) 771, 1227, 1802, 2596, 2926, 3582
PspOMI GGGCCC 1 cut(s) 1232
PspPPI RGGWCCY 5 cut(s) 566, 585, 1441, 1783, 3580
PstI CTGCAG 1 cut(s) 1314
PsyI GACNNNGTC 1 cut(s) 786
RseI CAYNNNNRTG 6 cut(s) 77, 120, 789, 1622, 2654, 3210
SacI GAGCTC 2 cut(s) 1740, 3783
Sau3AI GATC 8 cut(s) 520, 844, 1333, 1830, 1900, 2024, 3219, 3421
ScaI AGTACT 1 cut(s) 2043
SchI GAGTC 6 cut(s) 324, 1271, 2330, 2455, 2807, 3255
ScrFI CCNGG 8 cut(s) 610, 773, 1229, 1804, 1821, 2598, 2928, 3584
SduI GDGCHC 6 cut(s) 1236, 1354, 1740, 3401, 3590, 3783
SfaNI GCATC 9 cut(s) 382, 471, 758, 881, 1011, 1638, 1660, 3025, 3132
SfcI CTRYAG 2 cut(s) 1310, 3715
Sfr274I CTCGAG 1 cut(s) 91
SfuI TTCGAA 1 cut(s) 4173
SinI GGWCC 8 cut(s) 566, 585, 1031, 1441, 1783, 3580, 4074, 4190
SlaI CTCGAG 1 cut(s) 91
SmiMI CAYNNNNRTG 6 cut(s) 77, 120, 789, 1622, 2654, 3210
SmlI CTYRAG 4 cut(s) 91, 137, 485, 2376
SmoI CTYRAG 4 cut(s) 91, 137, 485, 2376
SpeI ACTAGT 3 cut(s) 2038, 2983, 4087
SphI GCATGC 1 cut(s) 3477
SseBI AGGCCT 2 cut(s) 541, 2596
SsiI CCGC 9 cut(s) 207, 1163, 2022, 2583, 2610, 2824, 2905, 3972, 4016
SspI AATATT 4 cut(s) 835, 1346, 2295, 3006
SstI GAGCTC 2 cut(s) 1740, 3783
StuI AGGCCT 2 cut(s) 541, 2596
StyD4I CCNGG 8 cut(s) 608, 771, 1227, 1802, 1819, 2596, 2926, 3582
StyI CCWWGG 3 cut(s) 683, 954, 2161
TaiI ACGT 5 cut(s) 507, 1248, 1883, 1890, 2254
TaqI TCGA 9 cut(s) 43, 92, 333, 1654, 1899, 2334, 2945, 3126, 4173
TatI WGTACW 6 cut(s) 1594, 2041, 2505, 3345, 3825, 3885
TauI GCSGC 2 cut(s) 210, 1165
TfiI GAWTC 8 cut(s) 531, 674, 1658, 2235, 2372, 2536, 3137, 3660
TseFI GTSAC 8 cut(s) 646, 1006, 1318, 1378, 1466, 2693, 3200, 3934
Tsp45I GTSAC 8 cut(s) 646, 1006, 1318, 1378, 1466, 2693, 3200, 3934
TspGWI ACGGA 6 cut(s) 221, 506, 1149, 1654, 1740, 2971
Tth111I GACNNNGTC 1 cut(s) 786
Van91I CCANNNNNTGG 3 cut(s) 578, 1957, 3805
Vha464I CTTAAG 1 cut(s) 485
VpaK11BI GGWCC 8 cut(s) 566, 585, 1031, 1441, 1783, 3580, 4074, 4190
VspI ATTAAT 1 cut(s) 447
XapI RAATTY 8 cut(s) 351, 1373, 1391, 2211, 2703, 3352, 3860, 3943
XbaI TCTAGA 2 cut(s) 764, 2228
XceI RCATGY 6 cut(s) 383, 1540, 2183, 2521, 3477, 4123
XcmI CCANNNNNNNNNTGG 1 cut(s) 3007
XhoI CTCGAG 1 cut(s) 91
XmaJI CCTAGG 1 cut(s) 2161
XmnI GAANNNNTTC 3 cut(s) 159, 1571, 3739
ZrmI AGTACT 1 cut(s) 2043
Zsp2I ATGCAT 2 cut(s) 1653, 3470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.