Rh6BG294300
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
52206549 .. 52217662
11114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG294300.1

Sequence Viewer

Length: 4287 bp
ATGGAGATCATCAGCTGTGACCTTGAAAAAGCCGGTCACAGTTTCCACCGAAGCGGTTCGTTTTGGACTGACAATGGCAGGGCGGTTTTCTCAACATCTTCAGTTGGAGAGGACAACGAGGACGATGAGGAAGCTCTCAAATGGGAAGCTCTGCAGAGACTTCCTACTTTCACTCGTTTAAAAAAGGGGTTGCTCACTAGTCCTCAAGGCCCTGCCATCGAAGTTGACTTGCATCACCTGGAGCTGCAAGAAAGGAAAGGCTTGATTGAGAGGCTTGTGGGAGTAGTCGAAGAGGATCATGAGAACTTCTTGTTGAGGTTCAAGAATCGAATCGATAGAGTTGGGATTAGTCTTCCTACAATTGAAGTCAGATTCGAGCATTTAAATATTGCAGCTGAATCTTATATAGGAGGCAGAGCTCTGCCTACAGTCTTCAATTACTGTATTAATTTAGTGGAGGGTTTCTTGAATTACCTTCATATTGTTCCTGTTAAGAAGCAACCCTTGTCTATACTTAAAGATGTCAGTGGGATCATCAAGCCTTGCAGAATGACACTGCTCTTGGGTCCTCCAAGTTCTGGGAAGACCACGCTCTTGTTGGCTTTGGCTGGAGTGCTTGATAAGGATCTCAAGGTTTCAGGAAGTGTGACTTACAATGGTCATGACATGCACGAATTTGTACCTCAGAGAAGTGCTGCATATATCAGTCAACATGATGTTCATATCGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCGGCAAGATGCCAAGGCGCGGGAACTCGTTATGAGATGCTAGAAGAGTTAAGTAGAAGAGAGAAAGATGCAAGAATTAAGCCAGATATAGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGCCAGAGGGCAGTATTTGTGACAAGTTATATTCTTAAGATTTTGGGATTGGATGGCTGTGCAGATACCTTGGTAGGGGATCAAATGATAAGGGGTATATCTGGAGGACAAAAGAAGCGTGTCACAACTGGTGAGATGTTGGTTGGACCTGCTAAGGCACTATTCATGGACGAAATATCGACTGGTTTGGATAGTTCAACAACTTATCAAATAGTAAATTCAATCAAGCAATCTGTTCACATTCTCCAAGGGACTGCTTTAATCTCACTGCTGCAGCCAGCACCTGAGACTTATGATCTATTTGATGACATTATTCTTCTTTCTGAAGGTCAAATCGTGTACCAAGGTCCCCGTGAATATGTTCTTGACTTTTTCGAATCCATGGGCTTCAGATGTCCTGAGAGAAAAGGTGTGGCCGATTTTCTGCAAGAAGTGACATCAAAGAAAGATCAGGAGCAGTATTGGGGAAGCAGAGATGAGCCTTACAGGTTCATCACAGTCCAAGAATTCTCGGAGGCATTCCAATCTTTTCATGTAGGGGGCACAATTACTAATGAACTTGCAACTCCATTTGACAAGACCAAGAGTCACCCAGCTGCATTATCAACCAATACATATGGTGTTAAAAAAGCAGAACTGGTGAAAGCTTGTCTCTCAAGGGAGTTCTTGCTGATGAAGAGGAACTCATTTGTTTACCTTTTCAAGCTTACCCAACAATCAATATTGGCTCTGATTACAATGACACTATTCCTAAGGACTAAGATGCACCATGACACAGTGATTAATGGAGGACTTTATGCTGGTGCTTTGTTCTTCTCCTTGTATACTGTTGTGCTCAATGCAGTGGCAGAGATATCGATGACTGTAGTGAAGCTTCCAGTTTTTTTTAAGCAAAGAAAGCTACTCTTTTTTCCACCATGGGCATATGCACTTCCCACGTGGATCCTCAAGATCCCTCTCACCAGTGTTGAAGTTGGTGTTTGGGTATTTATTTCCTATTATGTCATTGGATACGATCCAAATGTTGGAAGGTTGTTCAAGCAATACCTTCTCCTCCTACTCATGCAGCAAATGGCTAATGCATTATTCAAATTCATTGCTGGAATTGGTAGAAGCTTGACTATTGCTAATACACTTGCCTCATTCGCAACATGCATATATGTGGCTTTGGGAGGCTTTATCCTGTCAAGAGAGAATATAAAGAAATGGTGGAAATGGGGCTACTGGATATCACCTTTGATGTATGGGCAGAATGCTATTGTAGTTAATGAGTTCCTTGGCAAGAGTTGGAGACATGAAATTCCAAACTCAACAGAATCATTAGGAATTGCTGTTCTGAAGTCTCGTGGATTCCATACACATGCATATTGGTATTGGATTGGCGCTGGAGCATTGGCTGGATACATGCTCTTTTTCAACATTTGTTACACTCTGGCTCTTACTTATCTAAACCCTTTGGACAAGCCACAGGGTGTTAAATCAGAAGAATATCAAGGCAATAAAGATGATGACAAAAGCTTGACTCCTCAAATCAGCAAAGAGAAAGGATATGGAAGTACAACTCATAACACTAAAAGAGGAACGGTTCTTCCATTTGAACCATATTCCATCACCTTCGATGAAATCTCATACTCGGTGGACATGCCACAGGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTCCTCAGGCGCGTGAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCTCTTATGGGAGTGAGTGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGAAAAACTGGGGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAATCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATCGATTCCGAAACAAGGAAGATGTTTGTCGAGGAAGTGATGGCACTTGTGGAGTTGGATCCGTTAAGGCAAGCACTTGTAGGGTTGCCTGGTGCAAATGGTCTCTCAACAGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACTTCTGGCCTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTTAGGAATACTGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATCTTTGAATCTTTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTTGGGCCATTGGGGCGTCATTCTTGCCATTTAATCAAGTACTTTGAGGGAATTGATAATGTCAGTAAGATTAAGGATGGTTATAATTCGGCAACTTGGATGTTGGAAGTCACCAGTTCTGCAAAAGAAATAGCTTCTGGTGTTGATTTTGCTGATATTTATAAAAATTCAGAGCTATACAGGAGAAACAGAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGGTTCGAAGGACCTGTATTTCCCTACACAATACGCTCAGCCATTTTTAACACAATGCATGGCCTGTTTATGGAAACAACATTGGTCGTATTGGCGTAATCCACCATACACTGCCATAAAGTTGATATACACAACCATCCTAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAAAGACAAAACCACAAGATCTCTTCAATGTAATTGGTTCTATGTATGCTACGCTTCTCTTTCTCGGTATTAAGAATTCAAGAACAGTTCAGTCCTTAGTGTCTGTCGAACGAACAGTCTTTTATAGAGAACGGGCTGCTGGAATGTATTCTCCATTAGCTTATTCGTTTGCACAGGTTGTAATTGAGCTCCCTTATGTTTTTGCTCAAACAATTCTCTATGGTGTCATAGTTTATGCCATGATTGGATTAGAGTGGACTACTAAATTCTTACGGTATCTATTTTTCCTGTTTTTCACATTATTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCGTTACACCAAACCTTCACGTTGCTGCTATAACTACCAGTGCATTTTATTCAGTATGGAATCTTTTTTCCGGCTTCTTAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGTATGTCCAGTGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATTCACAGACCAACCTTGAGACGGGAGAAACTGTAGAAGAATTTATGAGGAGCTACTTTGGTTTCAAACACGAATTTCTAGGAGTGGTTGCAGCTGTGGTTGTTGGATTTGCAGTACTCTTTGCATTTATCTTTGCCTTGGCAATCAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1428

Amino Acids

161.03

Weight (kDa)

7.56

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 98 - 146 4.4e-06 ABC-transporter N-terminal
ABC_tran PF00005 172 - 353 5.7e-16 ABC transporter
ABC2_membrane PF01061 508 - 720 3.2e-45 ABC-2 type transporter
PDR_assoc PF08370 725 - 786 5.1e-28 Plant PDR ABC transporter associated
ABC_tran PF00005 860 - 1012 2.9e-21 ABC transporter
ABC2_membrane PF01061 1157 - 1370 9.6e-56 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3279, 3357
Acc36I ACCTGC 2 cut(s) 1042, 2848
AccB1I GGYRCC 1 cut(s) 2721
AccB7I CCANNNNNTGG 3 cut(s) 578, 1910, 3035
AccI GTMKAC 1 cut(s) 1709
AccII CGCG 2 cut(s) 779, 2586
AciI CCGC 3 cut(s) 54, 83, 779
AcoI YGGCCR 2 cut(s) 1299, 3936
AcuI CTGAAG 5 cut(s) 84, 1230, 1258, 2243, 3191
AcvI CACGTG 1 cut(s) 1824
AcyI GRCGYC 1 cut(s) 3211
AdeI CACNNNGTG 1 cut(s) 2357
AfaI GTAC 9 cut(s) 681, 1226, 2443, 2667, 2819, 3236, 3908, 4055, 4230
AfiI CCNNNNNNNGG 9 cut(s) 578, 778, 960, 1910, 2862, 3035, 3419, 3489, 4135
AflII CTTAAG 1 cut(s) 920
AflIII ACRYGT 1 cut(s) 2791
AhdI GACNNNNNGTC 1 cut(s) 1470
AhlI ACTAGT 2 cut(s) 197, 2992
AjnI CCWGG 4 cut(s) 237, 2605, 2935, 3418
AloI GAACNNNNNNTCC 6 cut(s) 2202, 2234, 2458, 2490, 4018, 4050
Alw21I GWGCWC 6 cut(s) 421, 1722, 2577, 3116, 3410, 3792
Alw26I GTCTC 7 cut(s) 151, 1166, 1541, 2170, 2232, 2954, 4127
Alw44I GTGCAC 1 cut(s) 3112
AlwNI CAGNNNCTG 1 cut(s) 1169
AoxI GGCC 7 cut(s) 208, 1299, 2603, 3037, 3200, 3480, 3936
ApaLI GTGCAC 1 cut(s) 3112
ArsI GACNNNNNNTTYG 2 cut(s) 3702, 3734
AseI ATTAAT 2 cut(s) 447, 1668
Asp700I GAANNNNTTC 3 cut(s) 55, 1245, 3748
AspLEI GCGC 3 cut(s) 779, 2270, 2586
AspS9I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3200, 3430, 3589
AsuHPI GGTGA 9 cut(s) 227, 1028, 1466, 1537, 1837, 2109, 2488, 3298, 3904
AsuII TTCGAA 2 cut(s) 1260, 3425
AvaII GGWCC 5 cut(s) 566, 1031, 1232, 3430, 3589
AxyI CCTNAGG 3 cut(s) 1637, 2559, 2579
BaeGI GKGCMC 3 cut(s) 1430, 2724, 3116
BaeI ACNNNNGTAYC 2 cut(s) 942, 975
BamHI GGATCC 2 cut(s) 1827, 2905
BanI GGYRCC 1 cut(s) 2721
BanII GRGCYC 2 cut(s) 421, 3792
BarI GAAGNNNNNNTAC 4 cut(s) 1743, 1775, 3899, 3931
BauI CACGAG 1 cut(s) 2229
BbrPI CACGTG 1 cut(s) 1824
BbsI GAAGAC 3 cut(s) 344, 424, 590
Bbv12I GWGCWC 6 cut(s) 421, 1722, 2577, 3116, 3410, 3792
BccI CCATC 8 cut(s) 224, 932, 2501, 2881, 3266, 3563, 3922, 4044
BceAI ACGGC 1 cut(s) 3923
BcgI CGANNNNNNTGC 2 cut(s) 1722, 1756
BciT130I CCWGG 4 cut(s) 239, 2607, 2937, 3420
BciVI GTATCC 3 cut(s) 1889, 2279, 2753
BcoDI GTCTC 7 cut(s) 151, 1166, 1541, 2170, 2232, 2954, 4127
BcuI ACTAGT 2 cut(s) 197, 2992
BfaI CTAG 8 cut(s) 198, 800, 2669, 2993, 3041, 3560, 4029, 4193
BfmI CTRYAG 6 cut(s) 152, 426, 1157, 1749, 2841, 4146
BfoI RGCGCY 1 cut(s) 2271
BfrI CTTAAG 1 cut(s) 920
BfuAI ACCTGC 2 cut(s) 1042, 2848
BfuI GTATCC 3 cut(s) 1889, 2279, 2753
BglI GCCNNNNNGGC 1 cut(s) 3208
BglII AGATCT 1 cut(s) 3619
BlpI GCTNAGC 1 cut(s) 3456
BmcAI AGTACT 2 cut(s) 3236, 4230
Bme1390I CCNGG 4 cut(s) 239, 2607, 2937, 3420
Bme18I GGWCC 5 cut(s) 566, 1031, 1232, 3430, 3589
BmeRI GACNNNNNGTC 1 cut(s) 1470
BmgT120I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3200, 3430, 3589
BmiI GGNNCC 7 cut(s) 567, 1234, 1829, 2723, 2907, 3590, 3598
BmrFI CCNGG 4 cut(s) 239, 2607, 2937, 3420
BmrI ACTGGG 1 cut(s) 2694
BmsI GCATC 7 cut(s) 241, 758, 786, 817, 887, 1638, 3034
BmuI ACTGGG 1 cut(s) 2694
BpiI GAAGAC 3 cut(s) 344, 424, 590
BplI GAGNNNNNCTC 2 cut(s) 3397, 3429
BpmI CTGGAG 5 cut(s) 260, 630, 1008, 2292, 3402
Bpu10I CCTNAGC 1 cut(s) 1038
Bpu1102I GCTNAGC 1 cut(s) 3456
Bpu14I TTCGAA 2 cut(s) 1260, 3425
BpuEI CTTGAG 5 cut(s) 189, 614, 1525, 1817, 4151
Bsa29I ATCGAT 3 cut(s) 333, 1742, 2850
BsaAI YACGTR 1 cut(s) 1824
BsaBI GATNNNNATC 1 cut(s) 624
BsaHI GRCGYC 1 cut(s) 3211
BsaI GGTCTC 1 cut(s) 2954
BsaWI WCCGGW 1 cut(s) 3095
BsaXI ACNNNNNCTCC 8 cut(s) 3400, 3430, 3581, 3611, 3924, 3954, 4131, 4161
Bsc4I CCNNNNNNNGG 9 cut(s) 578, 778, 960, 1910, 2862, 3035, 3419, 3489, 4135
Bse118I RCCGGY 1 cut(s) 32
Bse21I CCTNAGG 3 cut(s) 1637, 2559, 2579
Bse3DI GCAATG 2 cut(s) 1980, 2979
Bse8I GATNNNNATC 1 cut(s) 624
BseBI CCWGG 4 cut(s) 239, 2607, 2937, 3420
BseCI ATCGAT 3 cut(s) 333, 1742, 2850
BseGI GGATG 7 cut(s) 943, 2668, 2778, 3028, 3277, 3300, 3555
BseJI GATNNNNATC 1 cut(s) 624
BseLI CCNNNNNNNGG 9 cut(s) 578, 778, 960, 1910, 2862, 3035, 3419, 3489, 4135
BseMI GCAATG 2 cut(s) 1980, 2979
BseMII CTCAG 8 cut(s) 698, 1161, 1275, 2550, 2593, 2835, 3395, 3470
BseRI GAGGAG 5 cut(s) 1928, 2400, 2567, 3405, 4177
BseSI GKGCMC 3 cut(s) 1430, 2724, 3116
BseYI CCCAGC 1 cut(s) 1477
BsgI GTGCAG 1 cut(s) 966
Bsh1236I CGCG 2 cut(s) 779, 2586
BshFI GGCC 7 cut(s) 210, 1301, 2605, 3039, 3202, 3482, 3938
BshNI GGYRCC 1 cut(s) 2721
BshVI ATCGAT 3 cut(s) 333, 1742, 2850
BsiHKAI GWGCWC 6 cut(s) 421, 1722, 2577, 3116, 3410, 3792
BsiSI CCGG 3 cut(s) 33, 3096, 4008
BslFI GGGAC 4 cut(s) 1150, 1218, 3589, 3602
BslI CCNNNNNNNGG 9 cut(s) 578, 778, 960, 1910, 2862, 3035, 3419, 3489, 4135
BsmAI GTCTC 7 cut(s) 151, 1166, 1541, 2170, 2232, 2954, 4127
BsmBI CGTCTC 1 cut(s) 4127
BsmFI GGGAC 4 cut(s) 1150, 1218, 3589, 3602
BsmI GAATGC 2 cut(s) 1403, 2143
BsnI GGCC 7 cut(s) 210, 1301, 2605, 3039, 3202, 3482, 3938
Bso31I GGTCTC 1 cut(s) 2954
Bsp119I TTCGAA 2 cut(s) 1260, 3425
Bsp1286I GDGCHC 8 cut(s) 421, 1430, 1722, 2577, 2724, 3116, 3410, 3792
Bsp1720I GCTNAGC 1 cut(s) 3456
Bsp19I CCATGG 2 cut(s) 1266, 1802
BspACI CCGC 3 cut(s) 54, 83, 779
BspANI GGCC 7 cut(s) 210, 1301, 2605, 3039, 3202, 3482, 3938
BspCNI CTCAG 8 cut(s) 697, 1162, 1276, 2551, 2592, 2834, 3396, 3469
BspDI ATCGAT 3 cut(s) 333, 1742, 2850
BspFNI CGCG 2 cut(s) 779, 2586
BspHI TCATGA 2 cut(s) 298, 661
BspLI GGNNCC 7 cut(s) 567, 1234, 1829, 2723, 2907, 3590, 3598
BspMAI CTGCAG 3 cut(s) 156, 1161, 2845
BspMI ACCTGC 2 cut(s) 1042, 2848
BspT104I TTCGAA 2 cut(s) 1260, 3425
BspT107I GGYRCC 1 cut(s) 2721
BspTI CTTAAG 1 cut(s) 920
BspTNI GGTCTC 1 cut(s) 2954
BsrDI GCAATG 2 cut(s) 1980, 2979
BsrFI RCCGGY 1 cut(s) 32
BssAI RCCGGY 1 cut(s) 32
BssNAI GTATAC 1 cut(s) 1710
BssNI GRCGYC 1 cut(s) 3211
BssSI CACGAG 1 cut(s) 2229
Bst1107I GTATAC 1 cut(s) 1710
Bst2BI CACGAG 1 cut(s) 2229
Bst2UI CCWGG 4 cut(s) 239, 2607, 2937, 3420
Bst6I CTCTTC 5 cut(s) 285, 798, 811, 1556, 3629
BstACI GRCGYC 1 cut(s) 3211
BstAFI CTTAAG 1 cut(s) 920
BstAPI GCANNNNNTGC 1 cut(s) 3053
BstBAI YACGTR 1 cut(s) 1824
BstBI TTCGAA 2 cut(s) 1260, 3425
BstC8I GCNNGC 3 cut(s) 1164, 2644, 2919
BstDSI CCRYGG 2 cut(s) 1266, 1802
BstENI CCTNNNNNAGG 1 cut(s) 3417
BstF5I GGATG 7 cut(s) 943, 2668, 2778, 3028, 3277, 3300, 3555
BstFNI CGCG 2 cut(s) 779, 2586
BstH2I RGCGCY 1 cut(s) 2271
BstHHI GCGC 3 cut(s) 779, 2270, 2586
BstMAI GTCTC 7 cut(s) 151, 1166, 1541, 2170, 2232, 2954, 4127
BstMWI GCNNNNNNNGC 6 cut(s) 761, 1783, 2030, 2581, 3053, 3208
BstNI CCWGG 4 cut(s) 239, 2607, 2937, 3420
BstNSI RCATGY 6 cut(s) 670, 2040, 2249, 2293, 2530, 2795
BstSCI CCNGG 4 cut(s) 237, 2605, 2935, 3418
BstSFI CTRYAG 6 cut(s) 152, 426, 1157, 1749, 2841, 4146
BstSLI GKGCMC 3 cut(s) 1430, 2724, 3116
BstUI CGCG 2 cut(s) 779, 2586
BstV2I GAAGAC 3 cut(s) 344, 424, 590
BstX2I RGATCY 5 cut(s) 625, 1827, 1836, 2905, 3619
BstXI CCANNNNNNTGG 1 cut(s) 4077
BstYI RGATCY 5 cut(s) 625, 1827, 1836, 2905, 3619
BstZ17I GTATAC 1 cut(s) 1710
Bsu15I ATCGAT 3 cut(s) 333, 1742, 2850
Bsu36I CCTNAGG 3 cut(s) 1637, 2559, 2579
BsuI GTATCC 3 cut(s) 1889, 2279, 2753
BsuRI GGCC 7 cut(s) 210, 1301, 2605, 3039, 3202, 3482, 3938
BsuTUI ATCGAT 3 cut(s) 333, 1742, 2850
BtgI CCRYGG 2 cut(s) 1266, 1802
BtsCI GGATG 7 cut(s) 943, 2668, 2778, 3028, 3277, 3300, 3555
BtsI GCAGTG 4 cut(s) 554, 1151, 1734, 3528
BtsIMutI CAGTG 9 cut(s) 532, 554, 1151, 1668, 1734, 1855, 3528, 3982, 4077
BveI ACCTGC 2 cut(s) 1042, 2848
Cac8I GCNNGC 3 cut(s) 1164, 2644, 2919
CaiI CAGNNNCTG 1 cut(s) 1169
CciI TCATGA 2 cut(s) 298, 661
CfoI GCGC 3 cut(s) 779, 2270, 2586
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3200, 3430, 3589
ClaI ATCGAT 3 cut(s) 333, 1742, 2850
CseI GACGC 1 cut(s) 3200
Csp6I GTAC 9 cut(s) 680, 1225, 2442, 2666, 2818, 3235, 3907, 4054, 4229
CviQI GTAC 9 cut(s) 680, 1225, 2442, 2666, 2818, 3235, 3907, 4054, 4229
DraI TTTAAA 2 cut(s) 180, 384
DraIII CACNNNGTG 1 cut(s) 2357
DriI GACNNNNNGTC 1 cut(s) 1470
EaeI YGGCCR 2 cut(s) 1299, 3936
Eam1104I CTCTTC 5 cut(s) 285, 798, 811, 1556, 3629
Eam1105I GACNNNNNGTC 1 cut(s) 1470
EarI CTCTTC 5 cut(s) 285, 798, 811, 1556, 3629
Ecl136II GAGCTC 2 cut(s) 419, 3790
Eco24I GRGCYC 2 cut(s) 421, 3792
Eco31I GGTCTC 1 cut(s) 2954
Eco32I GATATC 4 cut(s) 859, 1740, 2115, 3139
Eco47I GGWCC 5 cut(s) 566, 1031, 1232, 3430, 3589
Eco53kI GAGCTC 2 cut(s) 419, 3790
Eco57I CTGAAG 5 cut(s) 84, 1230, 1258, 2243, 3191
Eco72I CACGTG 1 cut(s) 1824
Eco81I CCTNAGG 3 cut(s) 1637, 2559, 2579
EcoICRI GAGCTC 2 cut(s) 419, 3790
EcoNI CCTNNNNNAGG 1 cut(s) 3417
EcoO109I RGGNCCY 5 cut(s) 209, 566, 1232, 3430, 3589
EcoRI GAATTC 2 cut(s) 1391, 3676
EcoRII CCWGG 4 cut(s) 237, 2605, 2935, 3418
EcoRV GATATC 4 cut(s) 859, 1740, 2115, 3139
EcoT22I ATGCAT 4 cut(s) 1969, 2042, 2251, 3479
EcoT38I GRGCYC 2 cut(s) 421, 3792
Esp3I CGTCTC 1 cut(s) 4127
FalI AAGNNNNNCTT 6 cut(s) 488, 520, 634, 666, 1775, 1807
FaqI GGGAC 4 cut(s) 1150, 1218, 3589, 3602
FauI CCCGC 1 cut(s) 772
FauNDI CATATG 2 cut(s) 1501, 1810
FblI GTMKAC 1 cut(s) 1709
FokI GGATG 7 cut(s) 950, 2675, 2765, 3035, 3284, 3307, 3542
FriOI GRGCYC 2 cut(s) 421, 3792
FspBI CTAG 8 cut(s) 198, 800, 2669, 2993, 3041, 3560, 4029, 4193
GlaI GCGC 3 cut(s) 778, 2269, 2585
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 5 cut(s) 260, 630, 1008, 2292, 3402
HaeII RGCGCY 1 cut(s) 2271
HaeIII GGCC 7 cut(s) 210, 1301, 2605, 3039, 3202, 3482, 3938
HapII CCGG 3 cut(s) 33, 3096, 4008
HgaI GACGC 1 cut(s) 3200
HhaI GCGC 3 cut(s) 779, 2270, 2586
Hin1I GRCGYC 1 cut(s) 3211
Hin6I GCGC 3 cut(s) 777, 2268, 2584
HinP1I GCGC 3 cut(s) 777, 2268, 2584
HincII GTYRAC 2 cut(s) 226, 710
HindII GTYRAC 2 cut(s) 226, 710
HindIII AAGCTT 5 cut(s) 1530, 1589, 1757, 1999, 2401
HpaII CCGG 3 cut(s) 33, 3096, 4008
HphI GGTGA 9 cut(s) 227, 1028, 1466, 1537, 1837, 2109, 2488, 3298, 3904
HpyAV CCTTC 9 cut(s) 485, 862, 1205, 1908, 1943, 2509, 3421, 3925, 3962
HpyCH4IV ACGT 3 cut(s) 1823, 3195, 3957
HpyF10VI GCNNNNNNNGC 6 cut(s) 761, 1783, 2030, 2581, 3053, 3208
HpySE526I ACGT 3 cut(s) 1823, 3195, 3957
Hsp92I GRCGYC 1 cut(s) 3211
HspAI GCGC 3 cut(s) 777, 2268, 2584
LmnI GCTCC 8 cut(s) 241, 1339, 2273, 2580, 3602, 3795, 4080, 4164
LweI GCATC 7 cut(s) 241, 758, 786, 817, 887, 1638, 3034
MaeI CTAG 8 cut(s) 198, 800, 2669, 2993, 3041, 3560, 4029, 4193
MaeII ACGT 3 cut(s) 1823, 3195, 3957
MfeI CAATTG 2 cut(s) 360, 3060
MflI RGATCY 5 cut(s) 625, 1827, 1836, 2905, 3619
MhlI GDGCHC 8 cut(s) 421, 1430, 1722, 2577, 2724, 3116, 3410, 3792
MlyI GAGTC 2 cut(s) 1480, 2401
MmeI TCCRAC 7 cut(s) 85, 1009, 1891, 2153, 2883, 3279, 4198
Mph1103I ATGCAT 4 cut(s) 1969, 2042, 2251, 3479
MroXI GAANNNNTTC 3 cut(s) 55, 1245, 3748
MslI CAYNNNNRTG 2 cut(s) 2045, 2244
MspA1I CMGCKG 4 cut(s) 15, 395, 1481, 4208
MspCI CTTAAG 1 cut(s) 920
MspI CCGG 3 cut(s) 33, 3096, 4008
MspR9I CCNGG 4 cut(s) 239, 2607, 2937, 3420
MunI CAATTG 2 cut(s) 360, 3060
Mva1269I GAATGC 2 cut(s) 1403, 2143
MvaI CCWGG 4 cut(s) 239, 2607, 2937, 3420
MvnI CGCG 2 cut(s) 779, 2586
MwoI GCNNNNNNNGC 6 cut(s) 761, 1783, 2030, 2581, 3053, 3208
NcoI CCATGG 2 cut(s) 1266, 1802
NdeI CATATG 2 cut(s) 1501, 1810
NlaIV GGNNCC 7 cut(s) 567, 1234, 1829, 2723, 2907, 3590, 3598
NmuCI GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3304
NsiI ATGCAT 4 cut(s) 1969, 2042, 2251, 3479
NspI RCATGY 6 cut(s) 670, 2040, 2249, 2293, 2530, 2795
NspV TTCGAA 2 cut(s) 1260, 3425
PagI TCATGA 2 cut(s) 298, 661
PciI ACATGT 1 cut(s) 2791
PctI GAATGC 2 cut(s) 1403, 2143
PdmI GAANNNNTTC 3 cut(s) 55, 1245, 3748
PflMI CCANNNNNTGG 3 cut(s) 578, 1910, 3035
PleI GAGTC 2 cut(s) 1479, 2401
PmaCI CACGTG 1 cut(s) 1824
PmlI CACGTG 1 cut(s) 1824
PpsI GAGTC 2 cut(s) 1479, 2401
Ppu21I YACGTR 1 cut(s) 1824
PpuMI RGGWCCY 4 cut(s) 566, 1232, 3430, 3589
PscI ACATGT 1 cut(s) 2791
PshBI ATTAAT 2 cut(s) 447, 1668
PsiI TTATAA 2 cut(s) 3279, 3357
Psp124BI GAGCTC 2 cut(s) 421, 3792
Psp5II RGGWCCY 4 cut(s) 566, 1232, 3430, 3589
Psp6I CCWGG 4 cut(s) 237, 2605, 2935, 3418
PspCI CACGTG 1 cut(s) 1824
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 4 cut(s) 237, 2605, 2935, 3418
PspN4I GGNNCC 7 cut(s) 567, 1234, 1829, 2723, 2907, 3590, 3598
PspPI GGNCC 7 cut(s) 209, 566, 1031, 1232, 3200, 3430, 3589
PspPPI RGGWCCY 4 cut(s) 566, 1232, 3430, 3589
PstI CTGCAG 3 cut(s) 156, 1161, 2845
PstNI CAGNNNCTG 1 cut(s) 1169
PsuI RGATCY 5 cut(s) 625, 1827, 1836, 2905, 3619
PvuII CAGCTG 4 cut(s) 15, 395, 1481, 4208
RsaI GTAC 9 cut(s) 681, 1226, 2443, 2667, 2819, 3236, 3908, 4055, 4230
RsaNI GTAC 9 cut(s) 680, 1225, 2442, 2666, 2818, 3235, 3907, 4054, 4229
RseI CAYNNNNRTG 2 cut(s) 2045, 2244
SacI GAGCTC 2 cut(s) 421, 3792
Sau96I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3200, 3430, 3589
ScaI AGTACT 2 cut(s) 3236, 4230
SchI GAGTC 2 cut(s) 1480, 2401
ScrFI CCNGG 4 cut(s) 239, 2607, 2937, 3420
SduI GDGCHC 8 cut(s) 421, 1430, 1722, 2577, 2724, 3116, 3410, 3792
SfaNI GCATC 7 cut(s) 241, 758, 786, 817, 887, 1638, 3034
SfcI CTRYAG 6 cut(s) 152, 426, 1157, 1749, 2841, 4146
SfuI TTCGAA 2 cut(s) 1260, 3425
SinI GGWCC 5 cut(s) 566, 1031, 1232, 3430, 3589
SmiI ATTTAAAT 1 cut(s) 384
SmiMI CAYNNNNRTG 2 cut(s) 2045, 2244
SmlI CTYRAG 6 cut(s) 204, 629, 920, 1540, 1832, 4130
SmoI CTYRAG 6 cut(s) 204, 629, 920, 1540, 1832, 4130
SpeI ACTAGT 2 cut(s) 197, 2992
SsiI CCGC 3 cut(s) 54, 83, 779
SspI AATATT 2 cut(s) 388, 1608
SspMI CTAG 8 cut(s) 198, 800, 2669, 2993, 3041, 3560, 4029, 4193
SstI GAGCTC 2 cut(s) 421, 3792
StyD4I CCNGG 4 cut(s) 237, 2605, 2935, 3418
SwaI ATTTAAAT 1 cut(s) 384
TaiI ACGT 3 cut(s) 1826, 3198, 3960
TatI WGTACW 6 cut(s) 2441, 2665, 2817, 3234, 3906, 4228
TscAI CASTG 9 cut(s) 532, 561, 1158, 1668, 1734, 1855, 3535, 3982, 4077
TseFI GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3304
Tsp45I GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3304
TspGWI ACGGA 1 cut(s) 2898
TspRI CASTG 9 cut(s) 532, 561, 1158, 1668, 1734, 1855, 3535, 3982, 4077
Van91I CCANNNNNTGG 3 cut(s) 578, 1910, 3035
Vha464I CTTAAG 1 cut(s) 920
VneI GTGCAC 1 cut(s) 3112
VpaK11BI GGWCC 5 cut(s) 566, 1031, 1232, 3430, 3589
VspI ATTAAT 2 cut(s) 447, 1668
XagI CCTNNNNNAGG 1 cut(s) 3417
XceI RCATGY 6 cut(s) 670, 2040, 2249, 2293, 2530, 2795
XcmI CCANNNNNNNNNTGG 2 cut(s) 595, 3016
XmiI GTMKAC 1 cut(s) 1709
XmnI GAANNNNTTC 3 cut(s) 55, 1245, 3748
XspI CTAG 8 cut(s) 198, 800, 2669, 2993, 3041, 3560, 4029, 4193
ZrmI AGTACT 2 cut(s) 3236, 4230
Zsp2I ATGCAT 4 cut(s) 1969, 2042, 2251, 3479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.