Rroxscaffold_7G00182480
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
21583365 .. 21591238
7874 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00182480.1

Sequence Viewer

Length: 4395 bp
ATGGGAGGTGATTTTGCGTCGAATGGTGGCCGGATGGTGGAGAACTCGACTGAGGAGCTACTGCTCTGTTTTTTTGTTTCGGGCGGAGCTGGTTATTTAGTTTCTGCAATGGAGATCATCAGCTGTGACCTTGAAAAAGCCGGTCACAGTTTCCACCGAAGCGGTTCGTTTTGGACTGACAATGGCAGGGCGGATTTCTCAACATCTTCAGTTGGAGAGGACAACGAGGACGATGAGGAAGCTCTCAAATGGGAAGCTCTGCAGAGACTTCCTACTTTCACTCGTTTGAAAAAGGGGTTGCTCACTAGTCCTCAAGGCCCTGCCATCGAAGTTGACTTGCATCACCTGGAGCTGCAAGAAAGGAAAGGCTTGATTGAGAGGCTTGTGGGAGTAGTCGAAGAGGATCATGAGAACTTCTTGTTGAGGTTCAAGAATCGAATCGATAGAGTTGGGATTAGTCTTCCTACAATTGAAGTCAGATTCGAGCATTTAAATATTGCAGCTGAATCTTATATAGGAGGCAGAGCTCTGCCTACAGTCTTCAATTACTGTGTTAATTTAGTGGAGGGTTTCTTGAATTACCTTCATATTGTTCCTGTTAAGAAGCAACCCTTGTCTATACTTAAAGATGTCAGTGGGATCATCAAGCCTTGCAGAATGACACTGCTCTTGGGTCCTCCAAGTTCTGGGAAGACCACGCTCTTGTTGGCTTTGGCTGGAGAGCTTGATAAGGATCTCAAGGTTTCAGGAAGTGTGACTTACAATGGTCATGACATGCACGAATTTGTACCTCAGAGAAGTGCTGCATATATCAGTCAACATGATGTTCATATTGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCGGCAAGATGCCAAGGGGCCGGAACTCGTTATGAGATGCTAGAAGAGTTAAGTAGAAGAGAGAAAGAAGCAAGAATTAAGCCAGATATAGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGCCGAAGGGCAGTATTTGTGACAAGTTATATTCTTAAGATTTTGGGATTGGATGGCTGTGCAGATACCTTGGTAGGGGATCAAATGATAAGGGGTATATCTGGAGGACAAAAGAAGCGTGTCACAACCGGTGAGATGTTGGTTGGACCTGCTAAGGCACTATTCATGGACGAAATATCAACTGGTTTGGATAGTTCAACAACTTATCAAATAGTAAATTCAATCAAGCAATCTGTTCACATTCTCCAAGGGACTGCTTTCATCTCACTACTGCAGCCAGCACCTGAGACTTATGATCTATTTGATGACATTATTCTTCTTTCTGATGGTCAAATCGTGTACCAAGGTCCCCGTGAATATGTTCTTGACTTTTTCGAATCCATGGGCTTCAGATGTCCCAAGAGAAAAGGTGTGGCCGATTTTCTGCAAGAAGTGACATCAAAGAAAGATCAGGAGCAGTATTGGGGAAGCAGAGATGAGCCTTACAGGTTCATCACAGTCCAAGAATTCTCGGAGGCATTCCAATCTTTTCATGTAGGGGGCACAATTACTAATGAACTTGCAACTCCATTTGACAAGACCAAGAGTCACCCAGCTGCATTATCAACCAATATATATGGTGTTAAAAAAGCAGAACTGGTGAAAGCTTGTCTCTCAAGGGAGTTCCTGCTGATGAAGAGGAACTCATTTGTTTACCTTTTCAAGCTTACCCAACAATCAATATTGGCTCTGATTACAATGACACTATTCCTAAGGACTAAGATGCACCATGACACAGTGATTAATGGAGGACTTTATGCTGGTGCTTTGTTCTTCTCCTTGTATACTGTTGTGCTCAATGCAGTGGCAGAGATATCGATGACTGTAGCGAAGCTTCCAGTTTTTTATAAGCAGAGAAAGTCACTCTTTTTTCCACCATGGGCATATGCACTAGCCACTTGGATCCTCAAGATCCCTCTCACCTGTGTTGAAGTTGGTGTTTGGGTATTTATTTCCTATTATGTCATTGGATATGATCCAAATGTTGGAAGGTTGTTCAAGCAATACCTTCTCCTCCTACTCATGCATCAAATGGCTAATGCATTATTCCAATTCATTGCTGGAGCTGGTAGAAGCTTGACTATTGCCAATACACTTGCCTCATTCGCAACATGCATATATGTGGCTTTGGGAGGCTTTATCCTGTCAAGAGAGAATATAAAGAAATGGTGGAAATGGGGCTACTGGATATCACCTTTGATGTATGGGCAGAATGCTATTGTAGTTAATGAGTTCCTTGGCAAGAGTTGGAGACATGAAATTCCAAACTCAACAGAATCATTAGGAATTGCTGTTCTGAAGTCTCGTGGATTCCGTACACATGCATATTGGTATTGGATTGGCGCTGGAGCATTGGCTGGATACATGCTCTTTTTCAACATTTGTTACACTCTGGCTCTTACTTATCTAAACCCTTTGGACAAGCCACAGGGTGTTAAATCAGAAGAATCTCAAGGCAATAAAGATGATGACAAAAGCTTGACTCCTCAAATCAGCAAAGAGAAAGGAGATGGAAGTGCTACTCATAATATGAAAAGAGGAATGGTTCTTCCATTTGTACAATATTCAATCACCTTTGATGAAATCTCATACTCGGTGGACATGCCACAGGAAATGAAGAACCAAGGTATTCCTGAGGATAAATTGGTGCTACTCAGGTGCGTCAGTGGTGCTTTCAGGCCAGGTATTCTAACAGCTCTGATGGGAGTGAGCGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGAAAAACCGGTGGATATATTGAGGGAAATATCAGAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAATCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATCGATTCCGAAACACAGAAGATGTTTGTCGAGGAAGTGATGGCACTTGTGGAGTTGGATCCGTTAAGGCACGCACTAGTAGGGTTGCCTGGTGCTAACGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAATCCCTCCATAATTTTCATGGATGAACCAACGTCAGGCCTAGATGCAAGAGCTGCTGCGATCGTTATGAGAACAGTTAGGAACACCGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATATTTGAATCATTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTAGGGCCATTGGGGCGTCATTCTTGCCATTTAATTAAGTACTTCGAGGGAATTGAAAATGTTAGTAAGATTAAGGATGACTGCAATCCAGCAACTTGGATGTTGGAAGTGACCAGTTCTGCGAAAGAAATCGCTCTGGGGATCGATTTTGCTGATGTGTACAAAAAATCTGAGCAATACAAGAGAAACAGAACACTTATTGAAGAACTAAGCACCCCTCCTCCAGGTTCGAAGGACCTGTATTTCCCTACACAATACGCTCAGCCATTTTTAACACAATGCATGGCCTGTTTATGGAAACAACATTGGTCGTATTGGCGTAATCCACCATACACTGCCATAAAGTTGATATACACAACCATGCTAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAAAGACAAAACAACAAGATCTCTTCAATGTAATTGGTTCTATGTATGCTACCCTTCTCTTTCTCGGTATTAAGAATTCAACAACAGTTCAGTCCTTAGTGTCTGTCGAACTAACAGTCTTTTATAGAGAACGGGCTGCTGGAATGTATTCTCCATTAGCTTATTCCTTTGCACAGGTTGTAATTGAGCTCCCTTATGTTTTTGCACAAACAATTCTCTATGGTGTCATAGTTTATGCCATGATTGGATTAGAGTGGACTACTAAATTCTTATGGTATCTATTTTTCCTGTTTTTCACATTATTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCGTTACACCAAACCTTCACGTTGCTGCTATAACTACCAGTGCATTTTATTCAGTATGGAATCTGTTTTCCGGCTTCTTAATCCCACGGACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGTATGTCCAGTGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATTCACAGAACAACCTTGAGACGGGAGAAACTGTAGAAGAATTTATGAGGAGCTACTTTGGTTTCAAACATGAATTTCTAGGAGTTGTTGCAGCTGTGGTTGTTGGATTTGCAGTACTCTTTGCATTTATCTTTGCCTTGGCAATCAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1464

Amino Acids

164.71

Weight (kDa)

6.69

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 134 - 182 4.5e-06 ABC-transporter N-terminal
ABC_tran PF00005 208 - 389 4e-16 ABC transporter
ABC2_membrane PF01061 544 - 756 1.1e-48 ABC-2 type transporter
PDR_assoc PF08370 761 - 822 7e-28 Plant PDR ABC transporter associated
ABC_tran PF00005 899 - 1048 6.3e-21 ABC transporter
ABC2_membrane PF01061 1193 - 1406 1.4e-56 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1881
Acc36I ACCTGC 2 cut(s) 1150, 2956
AccB1I GGYRCC 1 cut(s) 2829
AccB7I CCANNNNNTGG 2 cut(s) 686, 2018
AccBSI CCGCTC 1 cut(s) 2745
AccI GTMKAC 1 cut(s) 1817
AciI CCGC 4 cut(s) 84, 162, 191, 2745
AcoI YGGCCR 3 cut(s) 28, 1407, 4044
AcsI RAATTY 9 cut(s) 782, 1210, 1499, 2292, 2820, 3784, 3974, 4262, 4295
AcuI CTGAAG 4 cut(s) 192, 1366, 2351, 3299
AcyI GRCGYC 1 cut(s) 3319
AdeI CACNNNGTG 1 cut(s) 2465
AfiI CCNNNNNNNGG 8 cut(s) 37, 686, 1068, 2018, 3143, 3527, 3597, 4243
AflII CTTAAG 1 cut(s) 1028
AflIII ACRYGT 1 cut(s) 2899
AgeI ACCGGT 2 cut(s) 1121, 2792
AhdI GACNNNNNGTC 1 cut(s) 1578
AhlI ACTAGT 3 cut(s) 305, 3031, 3100
AjnI CCWGG 4 cut(s) 345, 2713, 3043, 3526
AloI GAACNNNNNNTCC 2 cut(s) 2310, 2342
Alw21I GWGCWC 4 cut(s) 529, 1830, 3224, 3900
Alw26I GTCTC 7 cut(s) 259, 1274, 1649, 2278, 2340, 3062, 4235
Alw44I GTGCAC 1 cut(s) 3220
AlwNI CAGNNNCTG 1 cut(s) 1277
AoxI GGCC 9 cut(s) 28, 316, 885, 1407, 2711, 3145, 3308, 3588, 4044
ApaLI GTGCAC 1 cut(s) 3220
ApoI RAATTY 9 cut(s) 782, 1210, 1499, 2292, 2820, 3784, 3974, 4262, 4295
ArsI GACNNNNNNTTYG 2 cut(s) 3810, 3842
AseI ATTAAT 1 cut(s) 1776
AsiGI ACCGGT 2 cut(s) 1121, 2792
Asp700I GAANNNNTTC 3 cut(s) 163, 1353, 3856
AspLEI GCGC 1 cut(s) 2378
AspS9I GGNCC 8 cut(s) 317, 674, 885, 1139, 1340, 3308, 3538, 3697
AsuHPI GGTGA 9 cut(s) 20, 335, 1136, 1574, 1645, 1945, 2217, 2596, 4012
AsuII TTCGAA 2 cut(s) 1368, 3533
AsuNHI GCTAGC 1 cut(s) 3667
AvaII GGWCC 5 cut(s) 674, 1139, 1340, 3538, 3697
AxyI CCTNAGG 2 cut(s) 1745, 2667
BaeGI GKGCMC 3 cut(s) 1538, 2832, 3224
BaeI ACNNNNGTAYC 2 cut(s) 1050, 1083
BamHI GGATCC 2 cut(s) 1935, 3013
BanI GGYRCC 1 cut(s) 2829
BanII GRGCYC 2 cut(s) 529, 3900
BarI GAAGNNNNNNTAC 4 cut(s) 1851, 1883, 4007, 4039
BauI CACGAG 1 cut(s) 2337
BbsI GAAGAC 3 cut(s) 452, 532, 698
Bbv12I GWGCWC 4 cut(s) 529, 1830, 3224, 3900
BccI CCATC 9 cut(s) 28, 332, 1040, 1313, 2537, 2728, 2989, 4030, 4152
BceAI ACGGC 1 cut(s) 4031
BcgI CGANNNNNNTGC 2 cut(s) 1830, 1864
BciT130I CCWGG 4 cut(s) 347, 2715, 3045, 3528
BciVI GTATCC 2 cut(s) 2387, 2861
BcoDI GTCTC 7 cut(s) 259, 1274, 1649, 2278, 2340, 3062, 4235
BcuI ACTAGT 3 cut(s) 305, 3031, 3100
BfmI CTRYAG 6 cut(s) 260, 534, 1265, 1857, 2949, 4254
BfoI RGCGCY 1 cut(s) 2379
BfrI CTTAAG 1 cut(s) 1028
BfuAI ACCTGC 2 cut(s) 1150, 2956
BfuI GTATCC 2 cut(s) 2387, 2861
BglI GCCNNNNNGGC 1 cut(s) 3316
BglII AGATCT 1 cut(s) 3727
BlpI GCTNAGC 1 cut(s) 3564
BmcAI AGTACT 2 cut(s) 3344, 4338
Bme1390I CCNGG 4 cut(s) 347, 2715, 3045, 3528
Bme18I GGWCC 5 cut(s) 674, 1139, 1340, 3538, 3697
BmeRI GACNNNNNGTC 1 cut(s) 1578
BmgT120I GGNCC 8 cut(s) 317, 674, 885, 1139, 1340, 3308, 3538, 3697
BmiI GGNNCC 8 cut(s) 675, 886, 1342, 1937, 2831, 3015, 3698, 3706
BmrFI CCNGG 4 cut(s) 347, 2715, 3045, 3528
BmsI GCATC 7 cut(s) 349, 866, 894, 995, 1746, 2068, 3142
BmtI GCTAGC 1 cut(s) 3671
BpiI GAAGAC 3 cut(s) 452, 532, 698
BpmI CTGGAG 6 cut(s) 368, 738, 1116, 2115, 2400, 3510
Bpu10I CCTNAGC 1 cut(s) 1146
Bpu1102I GCTNAGC 1 cut(s) 3564
Bpu14I TTCGAA 2 cut(s) 1368, 3533
BpuEI CTTGAG 6 cut(s) 297, 722, 1633, 1925, 2469, 4259
Bsa29I ATCGAT 4 cut(s) 441, 1850, 2958, 3447
BsaAI YACGTR 1 cut(s) 3304
BsaBI GATNNNNATC 1 cut(s) 732
BsaHI GRCGYC 1 cut(s) 3319
BsaI GGTCTC 1 cut(s) 3062
BsaWI WCCGGW 3 cut(s) 1121, 2792, 3203
BsaXI ACNNNNNCTCC 8 cut(s) 3508, 3538, 3689, 3719, 4032, 4062, 4239, 4269
Bsc4I CCNNNNNNNGG 8 cut(s) 37, 686, 1068, 2018, 3143, 3527, 3597, 4243
Bse118I RCCGGY 3 cut(s) 140, 1121, 2792
Bse1I ACTGG 7 cut(s) 1180, 1635, 1871, 2222, 3417, 4083, 4178
Bse21I CCTNAGG 2 cut(s) 1745, 2667
Bse3DI GCAATG 3 cut(s) 114, 2088, 3087
Bse8I GATNNNNATC 1 cut(s) 732
BseBI CCWGG 4 cut(s) 347, 2715, 3045, 3528
BseCI ATCGAT 4 cut(s) 441, 1850, 2958, 3447
BseGI GGATG 7 cut(s) 39, 1051, 2776, 2886, 3136, 3385, 3408
BseJI GATNNNNATC 1 cut(s) 732
BseLI CCNNNNNNNGG 8 cut(s) 37, 686, 1068, 2018, 3143, 3527, 3597, 4243
BseMI GCAATG 3 cut(s) 114, 2088, 3087
BseMII CTCAG 9 cut(s) 42, 806, 1269, 2658, 2701, 2943, 3057, 3465, 3578
BseNI ACTGG 7 cut(s) 1180, 1635, 1871, 2222, 3417, 4083, 4178
BseRI GAGGAG 5 cut(s) 68, 2036, 2508, 3513, 4285
BseSI GKGCMC 3 cut(s) 1538, 2832, 3224
BseYI CCCAGC 1 cut(s) 1585
BsgI GTGCAG 1 cut(s) 1074
Bsh1285I CGRYCG 1 cut(s) 3171
BshFI GGCC 9 cut(s) 30, 318, 887, 1409, 2713, 3147, 3310, 3590, 4046
BshNI GGYRCC 1 cut(s) 2829
BshTI ACCGGT 2 cut(s) 1121, 2792
BshVI ATCGAT 4 cut(s) 441, 1850, 2958, 3447
BsiEI CGRYCG 1 cut(s) 3171
BsiHKAI GWGCWC 4 cut(s) 529, 1830, 3224, 3900
BsiSI CCGG 7 cut(s) 31, 141, 888, 1122, 2793, 3204, 4116
BslFI GGGAC 5 cut(s) 1258, 1326, 1374, 3697, 3710
BslI CCNNNNNNNGG 8 cut(s) 37, 686, 1068, 2018, 3143, 3527, 3597, 4243
BsmAI GTCTC 7 cut(s) 259, 1274, 1649, 2278, 2340, 3062, 4235
BsmBI CGTCTC 1 cut(s) 4235
BsmFI GGGAC 5 cut(s) 1258, 1326, 1374, 3697, 3710
BsmI GAATGC 2 cut(s) 1511, 2251
BsnI GGCC 9 cut(s) 30, 318, 887, 1409, 2713, 3147, 3310, 3590, 4046
Bso31I GGTCTC 1 cut(s) 3062
Bsp119I TTCGAA 2 cut(s) 1368, 3533
Bsp1286I GDGCHC 6 cut(s) 529, 1538, 1830, 2832, 3224, 3900
Bsp1407I TGTACA 2 cut(s) 2590, 3462
Bsp1720I GCTNAGC 1 cut(s) 3564
Bsp19I CCATGG 2 cut(s) 1374, 1910
BspACI CCGC 4 cut(s) 84, 162, 191, 2745
BspANI GGCC 9 cut(s) 30, 318, 887, 1409, 2713, 3147, 3310, 3590, 4046
BspCNI CTCAG 9 cut(s) 43, 805, 1270, 2659, 2700, 2942, 3058, 3466, 3577
BspDI ATCGAT 4 cut(s) 441, 1850, 2958, 3447
BspHI TCATGA 2 cut(s) 406, 769
BspLI GGNNCC 8 cut(s) 675, 886, 1342, 1937, 2831, 3015, 3698, 3706
BspMAI CTGCAG 3 cut(s) 264, 1269, 2953
BspMI ACCTGC 2 cut(s) 1150, 2956
BspOI GCTAGC 1 cut(s) 3671
BspT104I TTCGAA 2 cut(s) 1368, 3533
BspT107I GGYRCC 1 cut(s) 2829
BspTI CTTAAG 1 cut(s) 1028
BspTNI GGTCTC 1 cut(s) 3062
BsrBI CCGCTC 1 cut(s) 2745
BsrDI GCAATG 3 cut(s) 114, 2088, 3087
BsrFI RCCGGY 3 cut(s) 140, 1121, 2792
BsrGI TGTACA 2 cut(s) 2590, 3462
BsrI ACTGG 7 cut(s) 1180, 1635, 1871, 2222, 3417, 4083, 4178
BssAI RCCGGY 3 cut(s) 140, 1121, 2792
BssNAI GTATAC 1 cut(s) 1818
BssNI GRCGYC 1 cut(s) 3319
BssSI CACGAG 1 cut(s) 2337
Bst1107I GTATAC 1 cut(s) 1818
Bst2BI CACGAG 1 cut(s) 2337
Bst2UI CCWGG 4 cut(s) 347, 2715, 3045, 3528
Bst6I CTCTTC 5 cut(s) 393, 906, 919, 1664, 3737
BstACI GRCGYC 1 cut(s) 3319
BstAFI CTTAAG 1 cut(s) 1028
BstAPI GCANNNNNTGC 1 cut(s) 3161
BstAUI TGTACA 2 cut(s) 2590, 3462
BstBAI YACGTR 1 cut(s) 3304
BstBI TTCGAA 2 cut(s) 1368, 3533
BstC8I GCNNGC 4 cut(s) 1272, 2752, 3027, 3669
BstDSI CCRYGG 4 cut(s) 1374, 1910, 3195, 4130
BstENI CCTNNNNNAGG 1 cut(s) 3525
BstF5I GGATG 7 cut(s) 39, 1051, 2776, 2886, 3136, 3385, 3408
BstH2I RGCGCY 1 cut(s) 2379
BstHHI GCGC 1 cut(s) 2378
BstMAI GTCTC 7 cut(s) 259, 1274, 1649, 2278, 2340, 3062, 4235
BstMCI CGRYCG 1 cut(s) 3171
BstMWI GCNNNNNNNGC 5 cut(s) 869, 2138, 2751, 3161, 3316
BstNI CCWGG 4 cut(s) 347, 2715, 3045, 3528
BstNSI RCATGY 6 cut(s) 778, 2148, 2357, 2401, 2638, 2903
BstSCI CCNGG 4 cut(s) 345, 2713, 3043, 3526
BstSFI CTRYAG 6 cut(s) 260, 534, 1265, 1857, 2949, 4254
BstSLI GKGCMC 3 cut(s) 1538, 2832, 3224
BstSNI TACGTA 1 cut(s) 3304
BstV2I GAAGAC 3 cut(s) 452, 532, 698
BstX2I RGATCY 5 cut(s) 733, 1935, 1944, 3013, 3727
BstXI CCANNNNNNTGG 2 cut(s) 3399, 4185
BstYI RGATCY 5 cut(s) 733, 1935, 1944, 3013, 3727
BstZ17I GTATAC 1 cut(s) 1818
Bsu15I ATCGAT 4 cut(s) 441, 1850, 2958, 3447
Bsu36I CCTNAGG 2 cut(s) 1745, 2667
BsuI GTATCC 2 cut(s) 2387, 2861
BsuRI GGCC 9 cut(s) 30, 318, 887, 1409, 2713, 3147, 3310, 3590, 4046
BsuTUI ATCGAT 4 cut(s) 441, 1850, 2958, 3447
BtgI CCRYGG 4 cut(s) 1374, 1910, 3195, 4130
BtsCI GGATG 7 cut(s) 39, 1051, 2776, 2886, 3136, 3385, 3408
BtsI GCAGTG 3 cut(s) 662, 1842, 3636
BtsIMutI CAGTG 8 cut(s) 640, 662, 1776, 1842, 2704, 3636, 4090, 4185
BveI ACCTGC 2 cut(s) 1150, 2956
Cac8I GCNNGC 4 cut(s) 1272, 2752, 3027, 3669
CaiI CAGNNNCTG 1 cut(s) 1277
CciI TCATGA 2 cut(s) 406, 769
CfoI GCGC 1 cut(s) 2378
Cfr10I RCCGGY 3 cut(s) 140, 1121, 2792
Cfr13I GGNCC 8 cut(s) 317, 674, 885, 1139, 1340, 3308, 3538, 3697
ClaI ATCGAT 4 cut(s) 441, 1850, 2958, 3447
CseI GACGC 3 cut(s) 6, 2683, 3308
CspAI ACCGGT 2 cut(s) 1121, 2792
DraI TTTAAA 1 cut(s) 492
DraIII CACNNNGTG 1 cut(s) 2465
DriI GACNNNNNGTC 1 cut(s) 1578
EaeI YGGCCR 3 cut(s) 28, 1407, 4044
Eam1104I CTCTTC 5 cut(s) 393, 906, 919, 1664, 3737
Eam1105I GACNNNNNGTC 1 cut(s) 1578
EarI CTCTTC 5 cut(s) 393, 906, 919, 1664, 3737
EciI GGCGGA 2 cut(s) 99, 206
Ecl136II GAGCTC 2 cut(s) 527, 3898
Eco105I TACGTA 1 cut(s) 3304
Eco147I AGGCCT 1 cut(s) 3147
Eco24I GRGCYC 2 cut(s) 529, 3900
Eco31I GGTCTC 1 cut(s) 3062
Eco32I GATATC 3 cut(s) 967, 1848, 2223
Eco47I GGWCC 5 cut(s) 674, 1139, 1340, 3538, 3697
Eco53kI GAGCTC 2 cut(s) 527, 3898
Eco57I CTGAAG 4 cut(s) 192, 1366, 2351, 3299
Eco81I CCTNAGG 2 cut(s) 1745, 2667
EcoICRI GAGCTC 2 cut(s) 527, 3898
EcoNI CCTNNNNNAGG 1 cut(s) 3525
EcoO109I RGGNCCY 5 cut(s) 317, 674, 1340, 3538, 3697
EcoRI GAATTC 2 cut(s) 1499, 3784
EcoRII CCWGG 4 cut(s) 345, 2713, 3043, 3526
EcoRV GATATC 3 cut(s) 967, 1848, 2223
EcoT22I ATGCAT 5 cut(s) 2061, 2077, 2150, 2359, 3587
EcoT38I GRGCYC 2 cut(s) 529, 3900
Esp3I CGTCTC 1 cut(s) 4235
FalI AAGNNNNNCTT 6 cut(s) 596, 628, 742, 774, 1883, 1915
FaqI GGGAC 5 cut(s) 1258, 1326, 1374, 3697, 3710
FauNDI CATATG 1 cut(s) 1918
FblI GTMKAC 1 cut(s) 1817
FokI GGATG 7 cut(s) 46, 1058, 2783, 2873, 3143, 3392, 3415
FriOI GRGCYC 2 cut(s) 529, 3900
GlaI GCGC 1 cut(s) 2377
GsaI CCCAGC 1 cut(s) 1589
GsuI CTGGAG 6 cut(s) 368, 738, 1116, 2115, 2400, 3510
HaeII RGCGCY 1 cut(s) 2379
HaeIII GGCC 9 cut(s) 30, 318, 887, 1409, 2713, 3147, 3310, 3590, 4046
HapII CCGG 7 cut(s) 31, 141, 888, 1122, 2793, 3204, 4116
HgaI GACGC 3 cut(s) 6, 2683, 3308
HhaI GCGC 1 cut(s) 2378
Hin1I GRCGYC 1 cut(s) 3319
Hin6I GCGC 1 cut(s) 2376
HinP1I GCGC 1 cut(s) 2376
HincII GTYRAC 2 cut(s) 334, 818
HindII GTYRAC 2 cut(s) 334, 818
HindIII AAGCTT 5 cut(s) 1638, 1697, 1865, 2107, 2509
HpaII CCGG 7 cut(s) 31, 141, 888, 1122, 2793, 3204, 4116
HphI GGTGA 9 cut(s) 20, 335, 1136, 1574, 1645, 1945, 2217, 2596, 4012
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 9 cut(s) 593, 970, 993, 2016, 2051, 3529, 3773, 4033, 4070
HpyCH4IV ACGT 3 cut(s) 3140, 3303, 4065
HpyF10VI GCNNNNNNNGC 5 cut(s) 869, 2138, 2751, 3161, 3316
HpySE526I ACGT 3 cut(s) 3140, 3303, 4065
Hsp92I GRCGYC 1 cut(s) 3319
HspAI GCGC 1 cut(s) 2376
LweI GCATC 7 cut(s) 349, 866, 894, 995, 1746, 2068, 3142
MaeII ACGT 3 cut(s) 3140, 3303, 4065
MbiI CCGCTC 1 cut(s) 2745
MfeI CAATTG 1 cut(s) 468
MflI RGATCY 5 cut(s) 733, 1935, 1944, 3013, 3727
MhlI GDGCHC 6 cut(s) 529, 1538, 1830, 2832, 3224, 3900
MlyI GAGTC 2 cut(s) 1588, 2509
MmeI TCCRAC 7 cut(s) 193, 1117, 1999, 2261, 2991, 3387, 4306
Mph1103I ATGCAT 5 cut(s) 2061, 2077, 2150, 2359, 3587
MroXI GAANNNNTTC 3 cut(s) 163, 1353, 3856
MslI CAYNNNNRTG 2 cut(s) 2153, 3662
MspA1I CMGCKG 4 cut(s) 123, 503, 1589, 4316
MspCI CTTAAG 1 cut(s) 1028
MspI CCGG 7 cut(s) 31, 141, 888, 1122, 2793, 3204, 4116
MspR9I CCNGG 4 cut(s) 347, 2715, 3045, 3528
MunI CAATTG 1 cut(s) 468
Mva1269I GAATGC 2 cut(s) 1511, 2251
MvaI CCWGG 4 cut(s) 347, 2715, 3045, 3528
MwoI GCNNNNNNNGC 5 cut(s) 869, 2138, 2751, 3161, 3316
NcoI CCATGG 2 cut(s) 1374, 1910
NdeI CATATG 1 cut(s) 1918
NheI GCTAGC 1 cut(s) 3667
NlaIV GGNNCC 8 cut(s) 675, 886, 1342, 1937, 2831, 3015, 3698, 3706
NmuCI GTSAC 9 cut(s) 125, 143, 754, 1012, 1114, 1426, 1580, 1893, 3412
NsiI ATGCAT 5 cut(s) 2061, 2077, 2150, 2359, 3587
NspI RCATGY 6 cut(s) 778, 2148, 2357, 2401, 2638, 2903
NspV TTCGAA 2 cut(s) 1368, 3533
PacI TTAATTAA 1 cut(s) 3339
PagI TCATGA 2 cut(s) 406, 769
PceI AGGCCT 1 cut(s) 3147
PciI ACATGT 1 cut(s) 2899
PcsI WCGNNNNNNNCGW 1 cut(s) 2344
PctI GAATGC 2 cut(s) 1511, 2251
PdmI GAANNNNTTC 3 cut(s) 163, 1353, 3856
PflMI CCANNNNNTGG 2 cut(s) 686, 2018
PinAI ACCGGT 2 cut(s) 1121, 2792
Ple19I CGATCG 1 cut(s) 3171
PleI GAGTC 2 cut(s) 1587, 2509
PpsI GAGTC 2 cut(s) 1587, 2509
Ppu21I YACGTR 1 cut(s) 3304
PpuMI RGGWCCY 4 cut(s) 674, 1340, 3538, 3697
PscI ACATGT 1 cut(s) 2899
PshBI ATTAAT 1 cut(s) 1776
PsiI TTATAA 1 cut(s) 1881
Psp124BI GAGCTC 2 cut(s) 529, 3900
Psp5II RGGWCCY 4 cut(s) 674, 1340, 3538, 3697
Psp6I CCWGG 4 cut(s) 345, 2713, 3043, 3526
PspFI CCCAGC 1 cut(s) 1585
PspGI CCWGG 4 cut(s) 345, 2713, 3043, 3526
PspN4I GGNNCC 8 cut(s) 675, 886, 1342, 1937, 2831, 3015, 3698, 3706
PspPI GGNCC 8 cut(s) 317, 674, 885, 1139, 1340, 3308, 3538, 3697
PspPPI RGGWCCY 4 cut(s) 674, 1340, 3538, 3697
PstI CTGCAG 3 cut(s) 264, 1269, 2953
PstNI CAGNNNCTG 1 cut(s) 1277
PsuI RGATCY 5 cut(s) 733, 1935, 1944, 3013, 3727
PvuI CGATCG 1 cut(s) 3171
PvuII CAGCTG 4 cut(s) 123, 503, 1589, 4316
RseI CAYNNNNRTG 2 cut(s) 2153, 3662
SacI GAGCTC 2 cut(s) 529, 3900
Sau96I GGNCC 8 cut(s) 317, 674, 885, 1139, 1340, 3308, 3538, 3697
ScaI AGTACT 2 cut(s) 3344, 4338
SchI GAGTC 2 cut(s) 1588, 2509
ScrFI CCNGG 4 cut(s) 347, 2715, 3045, 3528
SduI GDGCHC 6 cut(s) 529, 1538, 1830, 2832, 3224, 3900
SfaNI GCATC 7 cut(s) 349, 866, 894, 995, 1746, 2068, 3142
SfcI CTRYAG 6 cut(s) 260, 534, 1265, 1857, 2949, 4254
SfuI TTCGAA 2 cut(s) 1368, 3533
SinI GGWCC 5 cut(s) 674, 1139, 1340, 3538, 3697
SmiI ATTTAAAT 1 cut(s) 492
SmiMI CAYNNNNRTG 2 cut(s) 2153, 3662
SmlI CTYRAG 7 cut(s) 312, 737, 1028, 1648, 1940, 2484, 4238
SmoI CTYRAG 7 cut(s) 312, 737, 1028, 1648, 1940, 2484, 4238
SnaBI TACGTA 1 cut(s) 3304
SpeI ACTAGT 3 cut(s) 305, 3031, 3100
SseBI AGGCCT 1 cut(s) 3147
SsiI CCGC 4 cut(s) 84, 162, 191, 2745
SspI AATATT 3 cut(s) 496, 1716, 2597
SstI GAGCTC 2 cut(s) 529, 3900
StuI AGGCCT 1 cut(s) 3147
StyD4I CCNGG 4 cut(s) 345, 2713, 3043, 3526
SwaI ATTTAAAT 1 cut(s) 492
TaiI ACGT 3 cut(s) 3143, 3306, 4068
TatI WGTACW 7 cut(s) 2590, 2773, 2925, 3342, 3462, 4014, 4336
TscAI CASTG 8 cut(s) 640, 669, 1776, 1842, 2704, 3643, 4090, 4185
TseFI GTSAC 9 cut(s) 125, 143, 754, 1012, 1114, 1426, 1580, 1893, 3412
Tsp45I GTSAC 9 cut(s) 125, 143, 754, 1012, 1114, 1426, 1580, 1893, 3412
TspGWI ACGGA 3 cut(s) 2336, 3006, 4147
TspRI CASTG 8 cut(s) 640, 669, 1776, 1842, 2704, 3643, 4090, 4185
Van91I CCANNNNNTGG 2 cut(s) 686, 2018
Vha464I CTTAAG 1 cut(s) 1028
VneI GTGCAC 1 cut(s) 3220
VpaK11BI GGWCC 5 cut(s) 674, 1139, 1340, 3538, 3697
VspI ATTAAT 1 cut(s) 1776
XagI CCTNNNNNAGG 1 cut(s) 3525
XapI RAATTY 9 cut(s) 782, 1210, 1499, 2292, 2820, 3784, 3974, 4262, 4295
XceI RCATGY 6 cut(s) 778, 2148, 2357, 2401, 2638, 2903
XcmI CCANNNNNNNNNTGG 3 cut(s) 703, 2090, 3124
XmiI GTMKAC 1 cut(s) 1817
XmnI GAANNNNTTC 3 cut(s) 163, 1353, 3856
ZrmI AGTACT 2 cut(s) 3344, 4338
Zsp2I ATGCAT 5 cut(s) 2061, 2077, 2150, 2359, 3587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.