Rh6DG287300
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000843
Physical Location & Seq
Forward (+)
48402126 .. 48545944
143819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG287300.1

Sequence Viewer

Length: 2385 bp
ATGGAGATCTTCATCTGTGACCTTGAAAAAGCCGGTCATAGTTTCAACAGAAGGGGTTCGTTTTGGACTGACGATGGCAGGGCGCGCGCGGTTTTCTCAGCATCTTCTGTTAGAGAGGACGATGAGGAAGCTCTTAAATGGGCAGCTCTGCATAGACTTCCTACCTTCACTCGTTTGAAAAAAGGGTTGCTCACTACTCCACAAGGCCATGCCAACGAAGTCGATGTGCATCACCTTGAGCTCCAAGAAAAGAAAGACTTGATCGAGAGGCTAGTGGGAGTTGCTGAGGAGGATCATGAGAAATTTTTGTTGAGGCTCAAGAGCCGAATCGATAGAGTTGGAATTAGTGTTCCTACAATTGAAGTTAGGTTCGAGCATTTGAAAATTGCAGCTGAAACTCATGTTGGAGGCAGGGCTCTTCCTTCTGTCTTCAATTATTGTGTTAATGTAGTGGAGGGTTTCTTGAATTGCCTGCACGTTCTTCCTGAAAAGAAGGAACATTTGTCTATACTGAAAGATGTCAGTGGGATCATCAAGCCTTGCAGGATGACATTGCTTTTGGGTCCTCCAAGTTCGGGGAAGACCACGCTCTTGCTGGCTTTGGCCGGAGAGCTTGATAAGGATCTCAAGGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTCCTCAGGCGCGTGAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCTCTTATGGGAGTGAGTGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGAAAAACTGGGGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAATCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATCGATTCCGAAACAAGGAAGATGTTTGTCGAGGAAGTGATGGCACTTGTGGAGTTGGATCCGTTAAGGCAAGCACTTGTAGGGTTGCCTGGTGCAAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACTTCTGGCCTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTTAGGAATACTGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATCTTTGAATCTTTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTTGGGCCATTGGGGCGTCATTCTTGCCATTTAATCAAGTACTTTGAGGGAATTGATAATGTCAGTAAGATTAAGGATGGTTATAATCCGGCAACTTGGATGTTGGAAGTCACCAGTTCTGCAAAAGAAATAGCTTCTGGTGTTGATTTTGCTGATATTTATAAAAATTCAGAGCTATACAGGAGAAACAAAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGATTCCAAGGACCTGTATTTCCCTACTCAATATTCTCAGCCATTTTTAACACAATGCATGGCTTGCTTATGGAAACAACATTGGTCATATTGGCGCAATCCAGCATATACTGCCATAAAGTTGATATACACAACCATCATAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAACGAAAAAACAACAGGATCTGTTCAATGCAATTGGTTCTATGTATGCTGCTGTTCTGTTTCTTGGTATTAAGAATTCAACAACAGTTCAGCCAGTAGTGTCTGTCGAACGAACAGTCTTTTATAGAGAACGAGCTGCTGGAATGTATTCTCCATTGGCTTATGCATTTGCACAGGTTGCAATTGAGCTCCCATATATTTTTGCCCAAACAATTCTCTATGGTGTCATAGTCTATGCAATGATCGGTTTTGAGTGGACTGTGACTAAATTCTTATGGTACCTATTTTTCATGTATTTCACATTTCTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCTTTACACCGAACCAGCACGTTGCTGCTATAAGCTCTAGTGCATTTTATGCAGTATGGAATGTCTTCTCCGGGTTCTTAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGCATGTCCAATGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATCTACAGAACGAGCTTGAGACGGGCGAAACTGTGGAACAATTTATGAGGACTTACTTTGGCTTCAAACATGAATTTCTAGGAGTGGTTGCAGCAGTAGTTGCTGGATTTGCAGTACTCTTTGCATTTGTCTTTGCCTTTTCAATTAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

794

Amino Acids

89.75

Weight (kDa)

7.61

Isoelectric Point (pI)

38.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 225 - 377 1.2e-21 ABC transporter
ABC2_membrane PF01061 522 - 736 6.2e-59 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1374, 1452
Acc36I ACCTGC 1 cut(s) 943
Acc65I GGTACC 1 cut(s) 1974
AccB1I GGYRCC 2 cut(s) 816, 1974
AccB7I CCANNNNNTGG 1 cut(s) 1130
AccII CGCG 4 cut(s) 85, 87, 89, 681
AciI CCGC 1 cut(s) 89
AclWI GGATC 6 cut(s) 300, 536, 630, 995, 1008, 1722
AcoI YGGCCR 1 cut(s) 603
AcsI RAATTY 5 cut(s) 302, 1456, 1771, 1964, 2285
AcuI CTGAAG 1 cut(s) 1286
AcyI GRCGYC 1 cut(s) 1306
AfaI GTAC 7 cut(s) 762, 914, 1331, 1976, 2006, 2153, 2328
AfiI CCNNNNNNNGG 3 cut(s) 575, 957, 1130
AflIII ACRYGT 1 cut(s) 886
AhlI ACTAGT 1 cut(s) 1087
AjnI CCWGG 2 cut(s) 700, 1030
AjuI GAANNNNNNNTTGG 2 cut(s) 387, 419
AloI GAACNNNNNNTCC 4 cut(s) 333, 365, 2116, 2148
Alw21I GWGCWC 5 cut(s) 243, 672, 1211, 1505, 1887
Alw26I GTCTC 2 cut(s) 1049, 2225
Alw44I GTGCAC 1 cut(s) 1207
AlwI GGATC 6 cut(s) 300, 536, 630, 995, 1008, 1722
AlwNI CAGNNNCTG 1 cut(s) 1717
AoxI GGCC 6 cut(s) 205, 603, 698, 1132, 1295, 2034
ApaLI GTGCAC 1 cut(s) 1207
ApeKI GCWGC 8 cut(s) 143, 389, 1148, 1151, 1745, 1832, 2060, 2303
ApoI RAATTY 5 cut(s) 302, 1456, 1771, 1964, 2285
ArsI GACNNNNNNTTYG 4 cut(s) 541, 573, 1797, 1829
Asp700I GAANNNNTTC 3 cut(s) 55, 1843, 2099
Asp718I GGTACC 1 cut(s) 1974
AspLEI GCGC 5 cut(s) 85, 87, 89, 681, 1611
AspS9I GGNCC 4 cut(s) 563, 1295, 1525, 1684
AsuC2I CCSGG 1 cut(s) 2107
AsuHPI GGTGA 3 cut(s) 224, 1393, 2002
AvaII GGWCC 3 cut(s) 563, 1525, 1684
AxyI CCTNAGG 2 cut(s) 654, 674
BaeGI GKGCMC 2 cut(s) 819, 1211
BamHI GGATCC 1 cut(s) 1000
BanI GGYRCC 2 cut(s) 816, 1974
BanII GRGCYC 3 cut(s) 243, 418, 1887
BarI GAAGNNNNNNTAC 2 cut(s) 1997, 2029
BbsI GAAGAC 3 cut(s) 421, 587, 2092
Bbv12I GWGCWC 5 cut(s) 243, 672, 1211, 1505, 1887
BbvCI CCTCAGC 1 cut(s) 285
BbvI GCAGC 8 cut(s) 155, 401, 1135, 1138, 1732, 1819, 2047, 2315
BccI CCATC 6 cut(s) 68, 976, 1361, 1658, 2020, 2142
BciT130I CCWGG 2 cut(s) 702, 1032
BciVI GTATCC 1 cut(s) 848
BcnI CCSGG 1 cut(s) 2107
BcoDI GTCTC 2 cut(s) 1049, 2225
BcuI ACTAGT 1 cut(s) 1087
BfaI CTAG 7 cut(s) 272, 764, 1088, 1136, 2073, 2127, 2291
BfmI CTRYAG 2 cut(s) 936, 2216
BfuAI ACCTGC 1 cut(s) 943
BfuI GTATCC 1 cut(s) 848
BglI GCCNNNNNGGC 1 cut(s) 1303
BglII AGATCT 2 cut(s) 6, 2212
BisI GCNGC 8 cut(s) 144, 390, 1149, 1152, 1746, 1833, 2061, 2304
BlsI GCNGC 8 cut(s) 145, 391, 1150, 1153, 1747, 1834, 2062, 2305
BmcAI AGTACT 2 cut(s) 1331, 2328
Bme1390I CCNGG 3 cut(s) 702, 1032, 2107
Bme18I GGWCC 3 cut(s) 563, 1525, 1684
BmgT120I GGNCC 4 cut(s) 563, 1295, 1525, 1684
BmiI GGNNCC 6 cut(s) 564, 818, 1002, 1685, 1693, 1976
BmrFI CCNGG 3 cut(s) 702, 1032, 2107
BmrI ACTGGG 1 cut(s) 789
BmsI GCATC 3 cut(s) 110, 238, 1129
BmuI ACTGGG 1 cut(s) 789
BpiI GAAGAC 3 cut(s) 421, 587, 2092
BplI GAGNNNNNCTC 2 cut(s) 1492, 1524
BpmI CTGGAG 1 cut(s) 1497
Bpu10I CCTNAGC 1 cut(s) 285
BpuEI CTTGAG 4 cut(s) 257, 302, 611, 2249
BpuMI CCSGG 1 cut(s) 2107
Bsa29I ATCGAT 2 cut(s) 330, 945
BsaBI GATNNNNATC 3 cut(s) 11, 228, 621
BsaHI GRCGYC 1 cut(s) 1306
BsaI GGTCTC 1 cut(s) 1049
BsaJI CCNNGG 3 cut(s) 643, 1521, 1687
BsaWI WCCGGW 1 cut(s) 1190
BsaXI ACNNNNNCTCC 4 cut(s) 1495, 1525, 1676, 1706
Bsc4I CCNNNNNNNGG 3 cut(s) 575, 957, 1130
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 3 cut(s) 784, 1404, 1790
Bse21I CCTNAGG 2 cut(s) 654, 674
Bse3DI GCAATG 3 cut(s) 551, 1074, 1941
Bse8I GATNNNNATC 3 cut(s) 11, 228, 621
BseBI CCWGG 2 cut(s) 702, 1032
BseCI ATCGAT 2 cut(s) 330, 945
BseDI CCNNGG 3 cut(s) 643, 1521, 1687
BseGI GGATG 6 cut(s) 552, 763, 873, 1123, 1372, 1395
BseJI GATNNNNATC 3 cut(s) 11, 228, 621
BseLI CCNNNNNNNGG 3 cut(s) 575, 957, 1130
BseMI GCAATG 3 cut(s) 551, 1074, 1941
BseMII CTCAG 8 cut(s) 111, 276, 645, 688, 930, 1044, 1490, 1565
BseNI ACTGG 3 cut(s) 784, 1404, 1790
BsePI GCGCGC 2 cut(s) 83, 85
BseRI GAGGAG 3 cut(s) 302, 662, 1500
BseSI GKGCMC 2 cut(s) 819, 1211
BseXI GCAGC 8 cut(s) 155, 401, 1135, 1138, 1732, 1819, 2047, 2315
BsgI GTGCAG 1 cut(s) 458
Bsh1236I CGCG 4 cut(s) 85, 87, 89, 681
BshFI GGCC 6 cut(s) 207, 605, 700, 1134, 1297, 2036
BshNI GGYRCC 2 cut(s) 816, 1974
BshVI ATCGAT 2 cut(s) 330, 945
BsiHKAI GWGCWC 5 cut(s) 243, 672, 1211, 1505, 1887
BsiSI CCGG 5 cut(s) 33, 606, 1191, 1379, 2106
BslFI GGGAC 2 cut(s) 1684, 1697
BslI CCNNNNNNNGG 3 cut(s) 575, 957, 1130
BsmAI GTCTC 2 cut(s) 1049, 2225
BsmBI CGTCTC 1 cut(s) 2225
BsmFI GGGAC 2 cut(s) 1684, 1697
BsnI GGCC 6 cut(s) 207, 605, 700, 1134, 1297, 2036
Bso31I GGTCTC 1 cut(s) 1049
Bsp1286I GDGCHC 7 cut(s) 243, 418, 672, 819, 1211, 1505, 1887
Bsp143I GATC 9 cut(s) 6, 261, 292, 528, 622, 1000, 1714, 1938, 2212
BspACI CCGC 1 cut(s) 89
BspANI GGCC 6 cut(s) 207, 605, 700, 1134, 1297, 2036
BspCNI CTCAG 8 cut(s) 110, 277, 646, 687, 929, 1045, 1491, 1564
BspDI ATCGAT 2 cut(s) 330, 945
BspFNI CGCG 4 cut(s) 85, 87, 89, 681
BspHI TCATGA 1 cut(s) 295
BspLI GGNNCC 6 cut(s) 564, 818, 1002, 1685, 1693, 1976
BspMAI CTGCAG 1 cut(s) 940
BspMI ACCTGC 1 cut(s) 943
BspPI GGATC 6 cut(s) 300, 536, 630, 995, 1008, 1722
BspQI GCTCTTC 1 cut(s) 423
BspT107I GGYRCC 2 cut(s) 816, 1974
BspTNI GGTCTC 1 cut(s) 1049
BsrDI GCAATG 3 cut(s) 551, 1074, 1941
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 3 cut(s) 784, 1404, 1790
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 3 cut(s) 643, 1521, 1687
BssHII GCGCGC 2 cut(s) 83, 85
BssMI GATC 9 cut(s) 6, 261, 292, 528, 622, 1000, 1714, 1938, 2212
BssNI GRCGYC 1 cut(s) 1306
BssT1I CCWWGG 3 cut(s) 643, 1521, 1687
Bst2UI CCWGG 2 cut(s) 702, 1032
Bst6I CTCTTC 1 cut(s) 423
BstACI GRCGYC 1 cut(s) 1306
BstAPI GCANNNNNTGC 6 cut(s) 1148, 1578, 1625, 1874, 2084, 2312
BstC8I GCNNGC 7 cut(s) 85, 87, 473, 597, 739, 1014, 1579
BstDEI CTNAG 8 cut(s) 97, 285, 654, 674, 916, 1053, 1499, 1551
BstF5I GGATG 6 cut(s) 552, 763, 873, 1123, 1372, 1395
BstFNI CGCG 4 cut(s) 85, 87, 89, 681
BstHHI GCGC 5 cut(s) 85, 87, 89, 681, 1611
BstKTI GATC 9 cut(s) 9, 264, 295, 531, 625, 1003, 1717, 1941, 2215
BstMAI GTCTC 2 cut(s) 1049, 2225
BstMBI GATC 9 cut(s) 6, 261, 292, 528, 622, 1000, 1714, 1938, 2212
BstNI CCWGG 2 cut(s) 702, 1032
BstNSI RCATGY 2 cut(s) 890, 2166
BstSCI CCNGG 3 cut(s) 700, 1030, 2105
BstSFI CTRYAG 2 cut(s) 936, 2216
BstSLI GKGCMC 2 cut(s) 819, 1211
BstUI CGCG 4 cut(s) 85, 87, 89, 681
BstV1I GCAGC 8 cut(s) 155, 401, 1135, 1138, 1732, 1819, 2047, 2315
BstV2I GAAGAC 3 cut(s) 421, 587, 2092
BstX2I RGATCY 5 cut(s) 6, 622, 1000, 1714, 2212
BstXI CCANNNNNNTGG 1 cut(s) 2175
BstYI RGATCY 5 cut(s) 6, 622, 1000, 1714, 2212
Bsu15I ATCGAT 2 cut(s) 330, 945
Bsu36I CCTNAGG 2 cut(s) 654, 674
BsuI GTATCC 1 cut(s) 848
BsuRI GGCC 6 cut(s) 207, 605, 700, 1134, 1297, 2036
BsuTUI ATCGAT 2 cut(s) 330, 945
BtsCI GGATG 6 cut(s) 552, 763, 873, 1123, 1372, 1395
BtsIMutI CAGTG 1 cut(s) 529
BveI ACCTGC 1 cut(s) 943
Cac8I GCNNGC 7 cut(s) 85, 87, 473, 597, 739, 1014, 1579
CaiI CAGNNNCTG 1 cut(s) 1717
CciI TCATGA 1 cut(s) 295
CfoI GCGC 5 cut(s) 85, 87, 89, 681, 1611
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 4 cut(s) 563, 1295, 1525, 1684
ClaI ATCGAT 2 cut(s) 330, 945
CseI GACGC 1 cut(s) 1295
Csp6I GTAC 7 cut(s) 761, 913, 1330, 1975, 2005, 2152, 2327
CviQI GTAC 7 cut(s) 761, 913, 1330, 1975, 2005, 2152, 2327
DdeI CTNAG 8 cut(s) 97, 285, 654, 674, 916, 1053, 1499, 1551
DpnI GATC 9 cut(s) 8, 263, 294, 530, 624, 1002, 1716, 1940, 2214
DpnII GATC 9 cut(s) 6, 261, 292, 528, 622, 1000, 1714, 1938, 2212
EaeI YGGCCR 1 cut(s) 603
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
Ecl136II GAGCTC 2 cut(s) 241, 1885
Eco130I CCWWGG 3 cut(s) 643, 1521, 1687
Eco24I GRGCYC 3 cut(s) 243, 418, 1887
Eco31I GGTCTC 1 cut(s) 1049
Eco32I GATATC 1 cut(s) 1234
Eco47I GGWCC 3 cut(s) 563, 1525, 1684
Eco53kI GAGCTC 2 cut(s) 241, 1885
Eco57I CTGAAG 1 cut(s) 1286
Eco81I CCTNAGG 2 cut(s) 654, 674
EcoICRI GAGCTC 2 cut(s) 241, 1885
EcoO109I RGGNCCY 3 cut(s) 563, 1525, 1684
EcoRI GAATTC 1 cut(s) 1771
EcoRII CCWGG 2 cut(s) 700, 1030
EcoRV GATATC 1 cut(s) 1234
EcoT14I CCWWGG 3 cut(s) 643, 1521, 1687
EcoT22I ATGCAT 2 cut(s) 1574, 1864
EcoT38I GRGCYC 3 cut(s) 243, 418, 1887
ErhI CCWWGG 3 cut(s) 643, 1521, 1687
Esp3I CGTCTC 1 cut(s) 2225
FalI AAGNNNNNCTT 2 cut(s) 242, 274
FaqI GGGAC 2 cut(s) 1684, 1697
Fnu4HI GCNGC 8 cut(s) 144, 390, 1149, 1152, 1746, 1833, 2061, 2304
FokI GGATG 6 cut(s) 559, 770, 860, 1130, 1379, 1402
FriOI GRGCYC 3 cut(s) 243, 418, 1887
Fsp4HI GCNGC 8 cut(s) 144, 390, 1149, 1152, 1746, 1833, 2061, 2304
FspBI CTAG 7 cut(s) 272, 764, 1088, 1136, 2073, 2127, 2291
GlaI GCGC 5 cut(s) 84, 86, 88, 680, 1610
GluI GCNGC 8 cut(s) 144, 390, 1149, 1152, 1746, 1833, 2061, 2304
GsuI CTGGAG 1 cut(s) 1497
HaeIII GGCC 6 cut(s) 207, 605, 700, 1134, 1297, 2036
HapII CCGG 5 cut(s) 33, 606, 1191, 1379, 2106
HgaI GACGC 1 cut(s) 1295
HhaI GCGC 5 cut(s) 85, 87, 89, 681, 1611
Hin1I GRCGYC 1 cut(s) 1306
Hin6I GCGC 5 cut(s) 83, 85, 87, 679, 1609
HinP1I GCGC 5 cut(s) 83, 85, 87, 679, 1609
HinfI GANTC 7 cut(s) 327, 833, 902, 947, 1241, 1517, 2131
HpaII CCGG 5 cut(s) 33, 606, 1191, 1379, 2106
HphI GGTGA 3 cut(s) 224, 1393, 2002
Hpy166II GTNNAC 4 cut(s) 932, 1186, 1209, 1953
Hpy188I TCNGA 3 cut(s) 846, 952, 1462
Hpy188III TCNNGA 9 cut(s) 265, 296, 319, 463, 485, 653, 852, 1514, 2374
Hpy8I GTNNAC 4 cut(s) 932, 1186, 1209, 1953
HpyAV CCTTC 5 cut(s) 45, 175, 432, 487, 2023
HpyCH4IV ACGT 3 cut(s) 477, 1290, 2055
HpyF3I CTNAG 8 cut(s) 97, 285, 654, 674, 916, 1053, 1499, 1551
HpySE526I ACGT 3 cut(s) 477, 1290, 2055
Hsp92I GRCGYC 1 cut(s) 1306
HspAI GCGC 5 cut(s) 83, 85, 87, 679, 1609
KpnI GGTACC 1 cut(s) 1978
Kzo9I GATC 9 cut(s) 6, 261, 292, 528, 622, 1000, 1714, 1938, 2212
LguI GCTCTTC 1 cut(s) 423
LmnI GCTCC 5 cut(s) 246, 675, 1697, 1890, 2178
Lsp1109I GCAGC 8 cut(s) 155, 401, 1135, 1138, 1732, 1819, 2047, 2315
LweI GCATC 3 cut(s) 110, 238, 1129
MaeI CTAG 7 cut(s) 272, 764, 1088, 1136, 2073, 2127, 2291
MaeII ACGT 3 cut(s) 477, 1290, 2055
MaeIII GTNAC 4 cut(s) 17, 889, 1399, 1957
MalI GATC 9 cut(s) 8, 263, 294, 530, 624, 1002, 1716, 1940, 2214
MauBI CGCGCGCG 1 cut(s) 85
MboI GATC 9 cut(s) 6, 261, 292, 528, 622, 1000, 1714, 1938, 2212
MfeI CAATTG 4 cut(s) 357, 1155, 1728, 1878
MflI RGATCY 5 cut(s) 6, 622, 1000, 1714, 2212
MhlI GDGCHC 7 cut(s) 243, 418, 672, 819, 1211, 1505, 1887
MmeI TCCRAC 4 cut(s) 319, 385, 978, 1374
Mph1103I ATGCAT 2 cut(s) 1574, 1864
MroXI GAANNNNTTC 3 cut(s) 55, 1843, 2099
MseI TTAA 9 cut(s) 135, 444, 1007, 1322, 1362, 1562, 1767, 2114, 2358
MspA1I CMGCKG 1 cut(s) 392
MspI CCGG 5 cut(s) 33, 606, 1191, 1379, 2106
MspR9I CCNGG 3 cut(s) 702, 1032, 2107
MunI CAATTG 4 cut(s) 357, 1155, 1728, 1878
MvaI CCWGG 2 cut(s) 702, 1032
MvnI CGCG 4 cut(s) 85, 87, 89, 681
NciI CCSGG 1 cut(s) 2107
NdeII GATC 9 cut(s) 6, 261, 292, 528, 622, 1000, 1714, 1938, 2212
NlaIV GGNNCC 6 cut(s) 564, 818, 1002, 1685, 1693, 1976
NmuCI GTSAC 3 cut(s) 17, 1399, 1957
NsiI ATGCAT 2 cut(s) 1574, 1864
NspI RCATGY 2 cut(s) 890, 2166
PagI TCATGA 1 cut(s) 295
PauI GCGCGC 2 cut(s) 83, 85
PciI ACATGT 1 cut(s) 886
PciSI GCTCTTC 1 cut(s) 423
PdmI GAANNNNTTC 3 cut(s) 55, 1843, 2099
PfeI GAWTC 7 cut(s) 327, 833, 902, 947, 1241, 1517, 2131
PflMI CCANNNNNTGG 1 cut(s) 1130
PkrI GCNGC 8 cut(s) 145, 391, 1150, 1153, 1747, 1834, 2062, 2305
PpuMI RGGWCCY 3 cut(s) 563, 1525, 1684
PscI ACATGT 1 cut(s) 886
PsiI TTATAA 2 cut(s) 1374, 1452
Psp124BI GAGCTC 2 cut(s) 243, 1887
Psp5II RGGWCCY 3 cut(s) 563, 1525, 1684
Psp6I CCWGG 2 cut(s) 700, 1030
PspGI CCWGG 2 cut(s) 700, 1030
PspN4I GGNNCC 6 cut(s) 564, 818, 1002, 1685, 1693, 1976
PspPI GGNCC 4 cut(s) 563, 1295, 1525, 1684
PspPPI RGGWCCY 3 cut(s) 563, 1525, 1684
PstI CTGCAG 1 cut(s) 940
PstNI CAGNNNCTG 1 cut(s) 1717
PsuI RGATCY 5 cut(s) 6, 622, 1000, 1714, 2212
PteI GCGCGC 2 cut(s) 83, 85
PvuII CAGCTG 1 cut(s) 392
RsaI GTAC 7 cut(s) 762, 914, 1331, 1976, 2006, 2153, 2328
RsaNI GTAC 7 cut(s) 761, 913, 1330, 1975, 2005, 2152, 2327
SacI GAGCTC 2 cut(s) 243, 1887
SapI GCTCTTC 1 cut(s) 423
SaqAI TTAA 9 cut(s) 135, 444, 1007, 1322, 1362, 1562, 1767, 2114, 2358
SatI GCNGC 8 cut(s) 144, 390, 1149, 1152, 1746, 1833, 2061, 2304
Sau3AI GATC 9 cut(s) 6, 261, 292, 528, 622, 1000, 1714, 1938, 2212
Sau96I GGNCC 4 cut(s) 563, 1295, 1525, 1684
ScaI AGTACT 2 cut(s) 1331, 2328
ScrFI CCNGG 3 cut(s) 702, 1032, 2107
SduI GDGCHC 7 cut(s) 243, 418, 672, 819, 1211, 1505, 1887
SfaNI GCATC 3 cut(s) 110, 238, 1129
SfcI CTRYAG 2 cut(s) 936, 2216
SinI GGWCC 3 cut(s) 563, 1525, 1684
SmlI CTYRAG 4 cut(s) 236, 317, 626, 2228
SmoI CTYRAG 4 cut(s) 236, 317, 626, 2228
SpeI ACTAGT 1 cut(s) 1087
SsiI CCGC 1 cut(s) 89
SspI AATATT 1 cut(s) 1547
SspMI CTAG 7 cut(s) 272, 764, 1088, 1136, 2073, 2127, 2291
SstI GAGCTC 2 cut(s) 243, 1887
StyD4I CCNGG 3 cut(s) 700, 1030, 2105
StyI CCWWGG 3 cut(s) 643, 1521, 1687
TaiI ACGT 3 cut(s) 480, 1293, 2058
TaqI TCGA 7 cut(s) 222, 264, 330, 372, 945, 972, 1803
TatI WGTACW 5 cut(s) 760, 912, 1329, 2004, 2326
TfiI GAWTC 7 cut(s) 327, 833, 902, 947, 1241, 1517, 2131
Tru1I TTAA 9 cut(s) 135, 444, 1007, 1322, 1362, 1562, 1767, 2114, 2358
Tru9I TTAA 9 cut(s) 135, 444, 1007, 1322, 1362, 1562, 1767, 2114, 2358
TscAI CASTG 1 cut(s) 529
TseFI GTSAC 3 cut(s) 17, 1399, 1957
TseI GCWGC 8 cut(s) 143, 389, 1148, 1151, 1745, 1832, 2060, 2303
Tsp45I GTSAC 3 cut(s) 17, 1399, 1957
TspDTI ATGAA 7 cut(s) 650, 915, 1102, 1134, 1205, 1975, 2298
TspGWI ACGGA 1 cut(s) 993
TspRI CASTG 1 cut(s) 529
Van91I CCANNNNNTGG 1 cut(s) 1130
VneI GTGCAC 1 cut(s) 1207
VpaK11BI GGWCC 3 cut(s) 563, 1525, 1684
XapI RAATTY 5 cut(s) 302, 1456, 1771, 1964, 2285
XceI RCATGY 2 cut(s) 890, 2166
XcmI CCANNNNNNNNNTGG 2 cut(s) 592, 1111
XmnI GAANNNNTTC 3 cut(s) 55, 1843, 2099
XspI CTAG 7 cut(s) 272, 764, 1088, 1136, 2073, 2127, 2291
ZrmI AGTACT 2 cut(s) 1331, 2328
Zsp2I ATGCAT 2 cut(s) 1574, 1864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.