Rh6CG295500
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
47489415 .. 47633233
143819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG295500.1

Sequence Viewer

Length: 3351 bp
ATGGAGATCTTCATCTGTGACCTTGAAAAAGCCGGTCATAGTTTCAACAGAAGGGGTTCGTTTTGGACTGACGATGGCAGGGCGCGCGCGGTTTTCTCAGCATCTTCTGTTAGAGAGGACGATGAGGAAGCTCTTAAATGGGCAGCTCTGCATAGACTTCCTACCTTCACTCGTTTGAAAAAAGGGTTGCTCACTACTCCACAAGGCCATGCCAACGAAGTCGATGTGCATCACCTTGAGCTCCAAGAAAAGAAAGACTTGATCGAGAGGCTAGTGGGAGTTGCTGAGGAGGATCATGAGAAATTTTTGTTGAGGCTCAAGAGCCGAATCGATAGAGTTGGAATTAGTGTTCCTACAATTGAAGTTAGGTTCGAGCATTTGAAAATTGCAGCTGAAACTCATGTTGGAGGCAGGGCTCTTCCTTCTGTCTTCAATTATTGTGTTAATGTAGTGGAGGGTTTCTTGAATTGCCTGCACGTTCTTCCTGAAAAGAAGGAACATTTGTCTATACTGAAAGATGTCAGTGGGATCATCAAGCCTTGCAGGATGACATTGCTTTTGGGTCCTCCAAGTTCGGGGAAGACCACGCTCTTGCTGGCTTTGGCCGGAGAGCTTGATAAGGATCTCAAGGTTTCAGGAAGTGTGACTTACAATGGTCATGGCATGCACGAGTTTGTGCCTCAGAGAAGTGCTGCGTATATCAGTCAACATGATGTTCATATTGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCTGCAAGATGCCAAGGGGTCGGACCTCGTTATGAGATGCTAGCAGAGCTAAGTAGAAGAGAGAAAGATGCAAGTATTAAGCCAGATCCAGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGTAAAAGAGCAGCATTTGTGACAAATTATATTCTGAAGGTTTTGGGATTGGAGGGCTGTGCAAATACCTTGGTAGGGGATCAATTGATAAGGGGTATCTCTGGAGGACAAAAGAAGCGAGTCACAACTGGTGAGATGTTAGTTGGTCCTGCTAAGGCACTATTCATGGACGAAATATCGACTGGTTTGGATAGTTCAACAACTTATCAAATAGTGAATTCCATCAAGCAATATGTTCATATTCTCCAAGGGACTGCATTCATCTCACTACTGCAGCCAGCACCCGAGACTTATGATCTATTTGATGACATTATTCTCCTTTCTGATGGTCAAATTGTGTATCAAGGTCCCCGTGAACATGTTCTCGATTTTTTTGAGTCTATGGGCTTCAGATGTCCAGAGAGAAAAGGCGTGGCCGATTTCCTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAGTATTGGTTTAGCAGAGATGAACCTTACAGGTTCATCACAGTCGAAGAATTTTCCGTGGCATTCCAATCTTTCCACGTAGGGTGCGCAATTACACATGAACTTGCTACTCCATTTGACAAGACCAAGAGCCACTCAGCTGCATTAACGACAAAAAAATATGGTGTTAAAAGAGCAGAACTGCTGAAAGCTTGTTTCTCAAGGGAGTTCTTGCTCATGAAGAGGAATTCATTTGTTTACCTTTTCAAGCTTATCCAAGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTCCTCAGGCGCGTGAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCTCTTATGGGAGTGAGTGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGAAAAACTGGGGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAATCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATCGATTCCGAAACAAGGAAGATGTTTGTCGAGGAAGTGATGGCACTTGTGGAGTTGGATCCGTTAAGGCAAGCACTTGTAGGGTTGCCTGGTGCAAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACTTCTGGCCTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTTAGGAATACTGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATCTTTGAATCTTTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTTGGGCCATTGGGGCGTCATTCTTGCCATTTAATCAAGTACTTTGAGGGAATTGATAATGTCAGTAAGATTAAGGATGGTTATAATCCGGCAACTTGGATGTTGGAAGTCACCAGTTCTGCAAAAGAAATAGCTTCTGGTGTTGATTTTGCTGATATTTATAAAAATTCAGAGCTATACAGGAGAAACAAAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGATTCCAAGGACCTGTATTTCCCTACTCAATATTCTCAGCCATTTTTAACACAATGCATGGCTTGCTTATGGAAACAACATTGGTCATATTGGCGCAATCCAGCATATACTGCCATAAAGTTGATATACACAACCATCATAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAACGAAAAAACAACAGGATCTGTTCAATGCAATTGGTTCTATGTATGCTGCTGTTCTGTTTCTTGGTATTAAGAATTCAACAACAGTTCAGCCAGTAGTGTCTGTCGAACGAACAGTCTTTTATAGAGAACGAGCTGCTGGAATGTATTCTCCATTGGCTTATGCATTTGCACAGGTTGCAATTGAGCTCCCATATATTTTTGCCCAAACAATTCTCTATGGTGTCATAGTCTATGCAATGATCGGTTTTGAGTGGACTGTGACTAAATTCTTATGGTACCTATTTTTCATGTATTTCACATTTCTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCTTTACACCGAACCAGCACGTTGCTGCTATAAGCTCTAGTGCATTTTATGCAGTATGGAATGTCTTCTCCGGGTTCTTAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGCATGTCCAATGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATCTACAGAACGAGCTTGAGACGGGCGAAACTGTGGAACAATTTATGAGGACTTACTTTGGCTTCAAACATGAATTTCTAGGAGTGGTTGCAGCAGTAGTTGCTGGATTTGCAGTACTCTTTGCATTTGTCTTTGCCTTTTCAATTAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1116

Amino Acids

125.92

Weight (kDa)

6.99

Isoelectric Point (pI)

37.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 171 - 352 3e-15 ABC transporter
ABC2_membrane_7 PF19055 386 - 439 4.4e-06 ABC-2 type transporter
ABC_tran PF00005 547 - 699 2.1e-21 ABC transporter
ABC2_membrane PF01061 844 - 1058 1.1e-58 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2340, 2418
Acc16I TGCGCA 1 cut(s) 1426
Acc36I ACCTGC 1 cut(s) 1909
Acc65I GGTACC 1 cut(s) 2940
AccB1I GGYRCC 2 cut(s) 1782, 2940
AccB7I CCANNNNNTGG 1 cut(s) 2096
AccII CGCG 4 cut(s) 85, 87, 89, 1647
AciI CCGC 1 cut(s) 89
AclWI GGATC 8 cut(s) 300, 536, 630, 836, 969, 1961, 1974, 2688
AcoI YGGCCR 2 cut(s) 603, 1296
AcsI RAATTY 8 cut(s) 302, 1099, 1388, 1564, 2422, 2737, 2930, 3251
AcuI CTGAAG 3 cut(s) 938, 1255, 2252
AcyI GRCGYC 1 cut(s) 2272
AfaI GTAC 7 cut(s) 1728, 1880, 2297, 2942, 2972, 3119, 3294
AfiI CCNNNNNNNGG 4 cut(s) 575, 957, 1923, 2096
AflIII ACRYGT 2 cut(s) 1240, 1852
AhlI ACTAGT 1 cut(s) 2053
AjnI CCWGG 2 cut(s) 1666, 1996
AjuI GAANNNNNNNTTGG 2 cut(s) 387, 419
AloI GAACNNNNNNTCC 4 cut(s) 333, 365, 3082, 3114
Alw21I GWGCWC 5 cut(s) 243, 1638, 2177, 2471, 2853
Alw26I GTCTC 3 cut(s) 1163, 2015, 3191
Alw44I GTGCAC 1 cut(s) 2173
AlwI GGATC 8 cut(s) 300, 536, 630, 836, 969, 1961, 1974, 2688
AlwNI CAGNNNCTG 1 cut(s) 2683
Ama87I CYCGRG 1 cut(s) 1166
AoxI GGCC 7 cut(s) 205, 603, 1296, 1664, 2098, 2261, 3000
ApaLI GTGCAC 1 cut(s) 2173
ApoI RAATTY 8 cut(s) 302, 1099, 1388, 1564, 2422, 2737, 2930, 3251
ArsI GACNNNNNNTTYG 4 cut(s) 541, 573, 2763, 2795
Asp700I GAANNNNTTC 4 cut(s) 55, 1242, 2809, 3065
Asp718I GGTACC 1 cut(s) 2940
AspLEI GCGC 6 cut(s) 85, 87, 89, 1427, 1647, 2577
AspS9I GGNCC 7 cut(s) 563, 779, 1028, 1229, 2261, 2491, 2650
AsuC2I CCSGG 1 cut(s) 3073
AsuHPI GGTGA 4 cut(s) 224, 1025, 2359, 2968
AsuNHI GCTAGC 1 cut(s) 796
AvaI CYCGRG 1 cut(s) 1166
AvaII GGWCC 6 cut(s) 563, 779, 1028, 1229, 2491, 2650
AxyI CCTNAGG 2 cut(s) 1620, 1640
BaeGI GKGCMC 2 cut(s) 1785, 2177
BamHI GGATCC 1 cut(s) 1966
BanI GGYRCC 2 cut(s) 1782, 2940
BanII GRGCYC 3 cut(s) 243, 418, 2853
BarI GAAGNNNNNNTAC 2 cut(s) 2963, 2995
BauI CACGAG 1 cut(s) 668
BbsI GAAGAC 3 cut(s) 421, 587, 3058
Bbv12I GWGCWC 5 cut(s) 243, 1638, 2177, 2471, 2853
BbvCI CCTCAGC 1 cut(s) 285
BccI CCATC 8 cut(s) 68, 1112, 1202, 1942, 2327, 2624, 2986, 3108
BciT130I CCWGG 2 cut(s) 1668, 1998
BciVI GTATCC 1 cut(s) 1814
BcnI CCSGG 1 cut(s) 3073
BcoDI GTCTC 3 cut(s) 1163, 2015, 3191
BcuI ACTAGT 1 cut(s) 2053
BfaI CTAG 8 cut(s) 272, 797, 1730, 2054, 2102, 3039, 3093, 3257
BfmI CTRYAG 3 cut(s) 1154, 1902, 3182
BfuAI ACCTGC 1 cut(s) 1909
BfuI GTATCC 1 cut(s) 1814
BglI GCCNNNNNGGC 1 cut(s) 2269
BglII AGATCT 2 cut(s) 6, 3178
BmcAI AGTACT 2 cut(s) 2297, 3294
Bme1390I CCNGG 3 cut(s) 1668, 1998, 3073
Bme18I GGWCC 6 cut(s) 563, 779, 1028, 1229, 2491, 2650
BmeT110I CYCGRG 1 cut(s) 1166
BmgT120I GGNCC 7 cut(s) 563, 779, 1028, 1229, 2261, 2491, 2650
BmiI GGNNCC 7 cut(s) 564, 1231, 1784, 1968, 2651, 2659, 2942
BmrFI CCNGG 3 cut(s) 1668, 1998, 3073
BmrI ACTGGG 1 cut(s) 1755
BmsI GCATC 7 cut(s) 110, 238, 755, 783, 814, 884, 2095
BmtI GCTAGC 1 cut(s) 800
BmuI ACTGGG 1 cut(s) 1755
BpiI GAAGAC 3 cut(s) 421, 587, 3058
BplI GAGNNNNNCTC 2 cut(s) 2458, 2490
BpmI CTGGAG 2 cut(s) 1005, 2463
Bpu10I CCTNAGC 2 cut(s) 285, 1035
BpuEI CTTGAG 5 cut(s) 257, 302, 611, 1522, 3215
BpuMI CCSGG 1 cut(s) 3073
Bsa29I ATCGAT 2 cut(s) 330, 1911
BsaAI YACGTR 1 cut(s) 1417
BsaBI GATNNNNATC 3 cut(s) 11, 228, 621
BsaHI GRCGYC 1 cut(s) 2272
BsaI GGTCTC 1 cut(s) 2015
BsaJI CCNNGG 8 cut(s) 747, 769, 951, 1129, 1395, 1609, 2487, 2653
BsaWI WCCGGW 1 cut(s) 2156
BsaXI ACNNNNNCTCC 4 cut(s) 2461, 2491, 2642, 2672
Bsc4I CCNNNNNNNGG 4 cut(s) 575, 957, 1923, 2096
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 5 cut(s) 1015, 1069, 1750, 2370, 2756
Bse21I CCTNAGG 2 cut(s) 1620, 1640
Bse3DI GCAATG 3 cut(s) 551, 2040, 2907
Bse8I GATNNNNATC 3 cut(s) 11, 228, 621
BseBI CCWGG 2 cut(s) 1668, 1998
BseCI ATCGAT 2 cut(s) 330, 1911
BseDI CCNNGG 8 cut(s) 747, 769, 951, 1129, 1395, 1609, 2487, 2653
BseGI GGATG 6 cut(s) 552, 1729, 1839, 2089, 2338, 2361
BseJI GATNNNNATC 3 cut(s) 11, 228, 621
BseLI CCNNNNNNNGG 4 cut(s) 575, 957, 1923, 2096
BseMI GCAATG 3 cut(s) 551, 2040, 2907
BseNI ACTGG 5 cut(s) 1015, 1069, 1750, 2370, 2756
BsePI GCGCGC 2 cut(s) 83, 85
BseRI GAGGAG 3 cut(s) 302, 1628, 2466
BseSI GKGCMC 2 cut(s) 1785, 2177
BsgI GTGCAG 1 cut(s) 458
Bsh1236I CGCG 4 cut(s) 85, 87, 89, 1647
BshFI GGCC 7 cut(s) 207, 605, 1298, 1666, 2100, 2263, 3002
BshNI GGYRCC 2 cut(s) 1782, 2940
BshVI ATCGAT 2 cut(s) 330, 1911
BsiHKAI GWGCWC 5 cut(s) 243, 1638, 2177, 2471, 2853
BsiHKCI CYCGRG 1 cut(s) 1166
BsiSI CCGG 5 cut(s) 33, 606, 2157, 2345, 3072
BslFI GGGAC 4 cut(s) 1147, 1215, 2650, 2663
BslI CCNNNNNNNGG 4 cut(s) 575, 957, 1923, 2096
BsmAI GTCTC 3 cut(s) 1163, 2015, 3191
BsmBI CGTCTC 1 cut(s) 3191
BsmFI GGGAC 4 cut(s) 1147, 1215, 2650, 2663
BsmI GAATGC 2 cut(s) 1139, 1400
BsnI GGCC 7 cut(s) 207, 605, 1298, 1666, 2100, 2263, 3002
Bso31I GGTCTC 1 cut(s) 2015
BsoBI CYCGRG 1 cut(s) 1166
Bsp1286I GDGCHC 7 cut(s) 243, 418, 1638, 1785, 2177, 2471, 2853
BspACI CCGC 1 cut(s) 89
BspANI GGCC 7 cut(s) 207, 605, 1298, 1666, 2100, 2263, 3002
BspDI ATCGAT 2 cut(s) 330, 1911
BspFNI CGCG 4 cut(s) 85, 87, 89, 1647
BspHI TCATGA 2 cut(s) 295, 1554
BspLI GGNNCC 7 cut(s) 564, 1231, 1784, 1968, 2651, 2659, 2942
BspMAI CTGCAG 2 cut(s) 1158, 1906
BspMI ACCTGC 1 cut(s) 1909
BspOI GCTAGC 1 cut(s) 800
BspPI GGATC 8 cut(s) 300, 536, 630, 836, 969, 1961, 1974, 2688
BspQI GCTCTTC 1 cut(s) 423
BspT107I GGYRCC 2 cut(s) 1782, 2940
BspTNI GGTCTC 1 cut(s) 2015
BsrDI GCAATG 3 cut(s) 551, 2040, 2907
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 5 cut(s) 1015, 1069, 1750, 2370, 2756
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 8 cut(s) 747, 769, 951, 1129, 1395, 1609, 2487, 2653
BssHII GCGCGC 2 cut(s) 83, 85
BssNI GRCGYC 1 cut(s) 2272
BssSI CACGAG 1 cut(s) 668
BssT1I CCWWGG 7 cut(s) 747, 769, 951, 1129, 1609, 2487, 2653
Bst2BI CACGAG 1 cut(s) 668
Bst2UI CCWGG 2 cut(s) 1668, 1998
Bst6I CTCTTC 3 cut(s) 423, 808, 1553
BstACI GRCGYC 1 cut(s) 2272
BstAPI GCANNNNNTGC 6 cut(s) 2114, 2544, 2591, 2840, 3050, 3278
BstBAI YACGTR 1 cut(s) 1417
BstDSI CCRYGG 1 cut(s) 1395
BstF5I GGATG 6 cut(s) 552, 1729, 1839, 2089, 2338, 2361
BstFNI CGCG 4 cut(s) 85, 87, 89, 1647
BstHHI GCGC 6 cut(s) 85, 87, 89, 1427, 1647, 2577
BstMAI GTCTC 3 cut(s) 1163, 2015, 3191
BstNI CCWGG 2 cut(s) 1668, 1998
BstNSI RCATGY 4 cut(s) 667, 1244, 1856, 3132
BstSCI CCNGG 3 cut(s) 1666, 1996, 3071
BstSFI CTRYAG 3 cut(s) 1154, 1902, 3182
BstSLI GKGCMC 2 cut(s) 1785, 2177
BstUI CGCG 4 cut(s) 85, 87, 89, 1647
BstV2I GAAGAC 3 cut(s) 421, 587, 3058
BstX2I RGATCY 6 cut(s) 6, 622, 841, 1966, 2680, 3178
BstXI CCANNNNNNTGG 1 cut(s) 3141
BstYI RGATCY 6 cut(s) 6, 622, 841, 1966, 2680, 3178
Bsu15I ATCGAT 2 cut(s) 330, 1911
Bsu36I CCTNAGG 2 cut(s) 1620, 1640
BsuI GTATCC 1 cut(s) 1814
BsuRI GGCC 7 cut(s) 207, 605, 1298, 1666, 2100, 2263, 3002
BsuTUI ATCGAT 2 cut(s) 330, 1911
BtgI CCRYGG 1 cut(s) 1395
BtsCI GGATG 6 cut(s) 552, 1729, 1839, 2089, 2338, 2361
BtsIMutI CAGTG 1 cut(s) 529
BveI ACCTGC 1 cut(s) 1909
CaiI CAGNNNCTG 1 cut(s) 2683
CciI TCATGA 2 cut(s) 295, 1554
CfoI GCGC 6 cut(s) 85, 87, 89, 1427, 1647, 2577
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 7 cut(s) 563, 779, 1028, 1229, 2261, 2491, 2650
ClaI ATCGAT 2 cut(s) 330, 1911
CseI GACGC 1 cut(s) 2261
Csp6I GTAC 7 cut(s) 1727, 1879, 2296, 2941, 2971, 3118, 3293
CviQI GTAC 7 cut(s) 1727, 1879, 2296, 2941, 2971, 3118, 3293
EaeI YGGCCR 2 cut(s) 603, 1296
Eam1104I CTCTTC 3 cut(s) 423, 808, 1553
EarI CTCTTC 3 cut(s) 423, 808, 1553
Ecl136II GAGCTC 2 cut(s) 241, 2851
Eco130I CCWWGG 7 cut(s) 747, 769, 951, 1129, 1609, 2487, 2653
Eco24I GRGCYC 3 cut(s) 243, 418, 2853
Eco31I GGTCTC 1 cut(s) 2015
Eco32I GATATC 2 cut(s) 856, 2200
Eco47I GGWCC 6 cut(s) 563, 779, 1028, 1229, 2491, 2650
Eco53kI GAGCTC 2 cut(s) 241, 2851
Eco57I CTGAAG 3 cut(s) 938, 1255, 2252
Eco81I CCTNAGG 2 cut(s) 1620, 1640
Eco88I CYCGRG 1 cut(s) 1166
EcoICRI GAGCTC 2 cut(s) 241, 2851
EcoO109I RGGNCCY 4 cut(s) 563, 1229, 2491, 2650
EcoRI GAATTC 3 cut(s) 1099, 1564, 2737
EcoRII CCWGG 2 cut(s) 1666, 1996
EcoRV GATATC 2 cut(s) 856, 2200
EcoT14I CCWWGG 7 cut(s) 747, 769, 951, 1129, 1609, 2487, 2653
EcoT22I ATGCAT 2 cut(s) 2540, 2830
EcoT38I GRGCYC 3 cut(s) 243, 418, 2853
ErhI CCWWGG 7 cut(s) 747, 769, 951, 1129, 1609, 2487, 2653
Esp3I CGTCTC 1 cut(s) 3191
FalI AAGNNNNNCTT 4 cut(s) 242, 274, 631, 663
FaqI GGGAC 4 cut(s) 1147, 1215, 2650, 2663
FokI GGATG 6 cut(s) 559, 1736, 1826, 2096, 2345, 2368
FriOI GRGCYC 3 cut(s) 243, 418, 2853
FspBI CTAG 8 cut(s) 272, 797, 1730, 2054, 2102, 3039, 3093, 3257
FspI TGCGCA 1 cut(s) 1426
GlaI GCGC 6 cut(s) 84, 86, 88, 1426, 1646, 2576
GsuI CTGGAG 2 cut(s) 1005, 2463
HaeIII GGCC 7 cut(s) 207, 605, 1298, 1666, 2100, 2263, 3002
HapII CCGG 5 cut(s) 33, 606, 2157, 2345, 3072
HgaI GACGC 1 cut(s) 2261
HhaI GCGC 6 cut(s) 85, 87, 89, 1427, 1647, 2577
Hin1I GRCGYC 1 cut(s) 2272
Hin6I GCGC 6 cut(s) 83, 85, 87, 1425, 1645, 2575
HinP1I GCGC 6 cut(s) 83, 85, 87, 1425, 1645, 2575
HincII GTYRAC 1 cut(s) 707
HindII GTYRAC 1 cut(s) 707
HindIII AAGCTT 2 cut(s) 1527, 1586
HinfI GANTC 9 cut(s) 327, 1002, 1259, 1799, 1868, 1913, 2207, 2483, 3097
HpaII CCGG 5 cut(s) 33, 606, 2157, 2345, 3072
HphI GGTGA 4 cut(s) 224, 1025, 2359, 2968
Hpy166II GTNNAC 7 cut(s) 707, 1238, 1576, 1898, 2152, 2175, 2919
Hpy188I TCNGA 9 cut(s) 684, 779, 880, 918, 1207, 1274, 1812, 1918, 2428
Hpy8I GTNNAC 7 cut(s) 707, 1238, 1576, 1898, 2152, 2175, 2919
HpyAV CCTTC 7 cut(s) 45, 175, 432, 487, 859, 913, 2989
HpyCH4IV ACGT 4 cut(s) 477, 1416, 2256, 3021
HpySE526I ACGT 4 cut(s) 477, 1416, 2256, 3021
Hsp92I GRCGYC 1 cut(s) 2272
HspAI GCGC 6 cut(s) 83, 85, 87, 1425, 1645, 2575
KpnI GGTACC 1 cut(s) 2944
LguI GCTCTTC 1 cut(s) 423
LmnI GCTCC 6 cut(s) 246, 1336, 1641, 2663, 2856, 3144
LweI GCATC 7 cut(s) 110, 238, 755, 783, 814, 884, 2095
MaeI CTAG 8 cut(s) 272, 797, 1730, 2054, 2102, 3039, 3093, 3257
MaeII ACGT 4 cut(s) 477, 1416, 2256, 3021
MaeIII GTNAC 8 cut(s) 17, 643, 901, 1003, 1315, 1855, 2365, 2923
MauBI CGCGCGCG 1 cut(s) 85
MfeI CAATTG 5 cut(s) 357, 965, 2121, 2694, 2844
MflI RGATCY 6 cut(s) 6, 622, 841, 1966, 2680, 3178
MhlI GDGCHC 7 cut(s) 243, 418, 1638, 1785, 2177, 2471, 2853
MlyI GAGTC 2 cut(s) 1011, 1268
MmeI TCCRAC 5 cut(s) 319, 385, 757, 1944, 2340
Mph1103I ATGCAT 2 cut(s) 2540, 2830
MroXI GAANNNNTTC 4 cut(s) 55, 1242, 2809, 3065
MspA1I CMGCKG 2 cut(s) 392, 1478
MspI CCGG 5 cut(s) 33, 606, 2157, 2345, 3072
MspR9I CCNGG 3 cut(s) 1668, 1998, 3073
MunI CAATTG 5 cut(s) 357, 965, 2121, 2694, 2844
Mva1269I GAATGC 2 cut(s) 1139, 1400
MvaI CCWGG 2 cut(s) 1668, 1998
MvnI CGCG 4 cut(s) 85, 87, 89, 1647
NciI CCSGG 1 cut(s) 3073
NheI GCTAGC 1 cut(s) 796
NlaIV GGNNCC 7 cut(s) 564, 1231, 1784, 1968, 2651, 2659, 2942
NmuCI GTSAC 7 cut(s) 17, 643, 901, 1003, 1315, 2365, 2923
NsbI TGCGCA 1 cut(s) 1426
NsiI ATGCAT 2 cut(s) 2540, 2830
NspI RCATGY 4 cut(s) 667, 1244, 1856, 3132
PaeI GCATGC 1 cut(s) 667
PagI TCATGA 2 cut(s) 295, 1554
PauI GCGCGC 2 cut(s) 83, 85
PciI ACATGT 2 cut(s) 1240, 1852
PciSI GCTCTTC 1 cut(s) 423
PctI GAATGC 2 cut(s) 1139, 1400
PdmI GAANNNNTTC 4 cut(s) 55, 1242, 2809, 3065
PfeI GAWTC 7 cut(s) 327, 1799, 1868, 1913, 2207, 2483, 3097
PflMI CCANNNNNTGG 1 cut(s) 2096
PleI GAGTC 2 cut(s) 1010, 1267
PpsI GAGTC 2 cut(s) 1010, 1267
Ppu21I YACGTR 1 cut(s) 1417
PpuMI RGGWCCY 4 cut(s) 563, 1229, 2491, 2650
PscI ACATGT 2 cut(s) 1240, 1852
PsiI TTATAA 2 cut(s) 2340, 2418
Psp124BI GAGCTC 2 cut(s) 243, 2853
Psp5II RGGWCCY 4 cut(s) 563, 1229, 2491, 2650
Psp6I CCWGG 2 cut(s) 1666, 1996
PspGI CCWGG 2 cut(s) 1666, 1996
PspN4I GGNNCC 7 cut(s) 564, 1231, 1784, 1968, 2651, 2659, 2942
PspPI GGNCC 7 cut(s) 563, 779, 1028, 1229, 2261, 2491, 2650
PspPPI RGGWCCY 4 cut(s) 563, 1229, 2491, 2650
PstI CTGCAG 2 cut(s) 1158, 1906
PstNI CAGNNNCTG 1 cut(s) 2683
PsuI RGATCY 6 cut(s) 6, 622, 841, 1966, 2680, 3178
PteI GCGCGC 2 cut(s) 83, 85
PvuII CAGCTG 2 cut(s) 392, 1478
RsaI GTAC 7 cut(s) 1728, 1880, 2297, 2942, 2972, 3119, 3294
RsaNI GTAC 7 cut(s) 1727, 1879, 2296, 2941, 2971, 3118, 3293
SacI GAGCTC 2 cut(s) 243, 2853
SapI GCTCTTC 1 cut(s) 423
Sau96I GGNCC 7 cut(s) 563, 779, 1028, 1229, 2261, 2491, 2650
ScaI AGTACT 2 cut(s) 2297, 3294
SchI GAGTC 2 cut(s) 1011, 1268
ScrFI CCNGG 3 cut(s) 1668, 1998, 3073
SduI GDGCHC 7 cut(s) 243, 418, 1638, 1785, 2177, 2471, 2853
SfaNI GCATC 7 cut(s) 110, 238, 755, 783, 814, 884, 2095
SfcI CTRYAG 3 cut(s) 1154, 1902, 3182
SinI GGWCC 6 cut(s) 563, 779, 1028, 1229, 2491, 2650
SmlI CTYRAG 5 cut(s) 236, 317, 626, 1537, 3194
SmoI CTYRAG 5 cut(s) 236, 317, 626, 1537, 3194
SpeI ACTAGT 1 cut(s) 2053
SphI GCATGC 1 cut(s) 667
SsiI CCGC 1 cut(s) 89
SspI AATATT 1 cut(s) 2513
SspMI CTAG 8 cut(s) 272, 797, 1730, 2054, 2102, 3039, 3093, 3257
SstI GAGCTC 2 cut(s) 243, 2853
StyD4I CCNGG 3 cut(s) 1666, 1996, 3071
StyI CCWWGG 7 cut(s) 747, 769, 951, 1129, 1609, 2487, 2653
TaiI ACGT 4 cut(s) 480, 1419, 2259, 3024
TatI WGTACW 5 cut(s) 1726, 1878, 2295, 2970, 3292
TfiI GAWTC 7 cut(s) 327, 1799, 1868, 1913, 2207, 2483, 3097
TscAI CASTG 1 cut(s) 529
TseFI GTSAC 7 cut(s) 17, 643, 901, 1003, 1315, 2365, 2923
Tsp45I GTSAC 7 cut(s) 17, 643, 901, 1003, 1315, 2365, 2923
TspGWI ACGGA 2 cut(s) 1384, 1959
TspRI CASTG 1 cut(s) 529
Van91I CCANNNNNTGG 1 cut(s) 2096
VneI GTGCAC 1 cut(s) 2173
VpaK11BI GGWCC 6 cut(s) 563, 779, 1028, 1229, 2491, 2650
XapI RAATTY 8 cut(s) 302, 1099, 1388, 1564, 2422, 2737, 2930, 3251
XceI RCATGY 4 cut(s) 667, 1244, 1856, 3132
XcmI CCANNNNNNNNNTGG 2 cut(s) 592, 2077
XmnI GAANNNNTTC 4 cut(s) 55, 1242, 2809, 3065
XspI CTAG 8 cut(s) 272, 797, 1730, 2054, 2102, 3039, 3093, 3257
ZrmI AGTACT 2 cut(s) 2297, 3294
Zsp2I ATGCAT 2 cut(s) 2540, 2830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.