Rh6DG286000
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000843
Physical Location & Seq
Reverse (-)
48074064 .. 48081244
7181 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG286000.1

Sequence Viewer

Length: 2385 bp
ATGGAGATCATCAGCTGTGACCTTGAAAACGTCGGTCACAGTTTCCACCAAAGCGGTTCGTTTTGGACTGACAATGGCAGGGCGGTTTTCTCAACATCTTCAGTTGGAGAGGACAACGAGGACGATGAGGAAGCTCTCAAATGGGAAGCTCTGCAGAGACTTCCTACTTTCACTCGTTTGAAAAAGGGGTTGCTCACTAGTCCTCAAGGCCCTGCCATCGAAGTTGACTTGCATCACCTGGAGCTGCAAGAAAGGAAAGGCTTGATTGAGAGGCTTGTGGGAGTAGTCGAAGAGGATCATGAGAACTTCTTGTTGAGGTTCAAGAATCGAATCGATAGAGTTGGGATTAGTCTTCCTACAATTGAAGTCAGATTCGAGCATTTAAATATTGCAGCTGAATCTTATATAGGAGGCAGAGCTCTACCTACAGTCTTCAATTACTGTGTTAATTTAGTGGAGGGTTTCTTGAATTACCTTCATATTGTTCCTGTTAAGAAGCAACCCTTGTCTATACTTAAAGATGTCAGTGGGATCATCAAGCCTTGCAGAATGACACTGCTCTTGGGTCCTCCAAGTTCTGGGATGACCACGCTCTTGTTGGCTTTGGCTGGAGAGCTTGATAAGGATCTCAAGGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTCCTCAGGCGCGTGAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCTCTTATGGGAGTGAGTGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGAAAAACTGGGGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAGTCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATCGATTCTGAAACACAGAAGATGTTTGTGGAGGAAGTGATGGCACTTGTGGAGTTGGATGTGTTAAGGCACGCACTAGTAGGGTTGCCTGGTGCTAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACGTCAGGTCTAGATGCAAGAGCAGCTGCGATCGTTATGAGAACAGTTAGGAACACCGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATATTTGAATCATTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTAGGGCCATTGGGGCGTCATTCTTGCCATTTAATTAAGTACTTCGAGGGAATTGAAAATGTCAGTAAGATTAAGGATGGCTATAATCCAGCAACTTGGATGTTGGAAGTGACCAGTTCTGCGAAAGAAATCGCTCTGGGGATCGATTTTGCTGATGTGTACAAAAAATCTGAGCTATACAGGAGAAACAGAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGGTTCGAAGGACCTGTATTTCCCTACACAATACGCTCAGCCATTTTTAACACAATGCATGGCCTGTTTATGGAAACAACATTGGTCGTATTGGCGTAATCCACCATACACTGCCATAAAGTTGATATACACAACCATGCTAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAAAGACAAAACAACAAGATCTCTTCAATGTAATTGGTTCTATGTATGCTACGCTTCTCTTTCTCGGTATTAAGAATTCAACAACAGTTCAGTCCTTAGTGTCTGTCGAACGAACAGTCTTTTATAGAGAACGGGCTGCTGGAATGTATTCTCCATTAGCTTATTCGTTTGCACAGGTTGTAATTGAGCTCCCTTATGTTTTTGCTCAAACAATTCTCTATGGTGTCATAGTTTATGCCATGATTGGATTAGAGTGGACTACTAAATTCTTATGGTATCTATTTTTCCTGTTTTTCACACTATTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCGTTACACCAAACCTTCACGTTGCTGCTATAACCACCAGTGCATTTTATTCACTATGGAATCTTTTTTCCGGCTTCTTAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGTATGTCCAGTGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATTCACAGAACAACCTTGAGACGGGAGAAACTGTAGAAGAATTTATGAGGAGCTACTTTGGTTTCAAACATGAATTTCTAGGAGTGGCTGCAGCTGTGGTTGTTGGATTTGCAGTACTCTTTGCATTTATCTTTGCCTTGGCAATCAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

794

Amino Acids

89.64

Weight (kDa)

6.41

Isoelectric Point (pI)

40.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 98 - 146 2.2e-06 ABC-transporter N-terminal
ABC_tran PF00005 226 - 378 1e-21 ABC transporter
ABC2_membrane PF01061 523 - 736 6.3e-58 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 946
AccB1I GGYRCC 1 cut(s) 819
AccB7I CCANNNNNTGG 1 cut(s) 578
AccII CGCG 1 cut(s) 684
AciI CCGC 2 cut(s) 54, 83
AclWI GGATC 4 cut(s) 303, 539, 633, 1442
AcoI YGGCCR 1 cut(s) 2034
AcsI RAATTY 4 cut(s) 1774, 1964, 2252, 2285
AcuI CTGAAG 2 cut(s) 84, 1289
AcyI GRCGYC 1 cut(s) 1309
AfaI GTAC 7 cut(s) 765, 917, 1334, 1454, 2006, 2153, 2328
AfiI CCNNNNNNNGG 5 cut(s) 578, 1133, 1517, 1587, 2233
AflIII ACRYGT 1 cut(s) 889
AhlI ACTAGT 3 cut(s) 197, 1021, 1090
AjnI CCWGG 4 cut(s) 237, 703, 1033, 1516
AloI GAACNNNNNNTCC 2 cut(s) 2116, 2148
Alw21I GWGCWC 5 cut(s) 421, 675, 1214, 1508, 1890
Alw26I GTCTC 3 cut(s) 151, 1052, 2225
Alw44I GTGCAC 1 cut(s) 1210
AlwI GGATC 4 cut(s) 303, 539, 633, 1442
AoxI GGCC 5 cut(s) 208, 701, 1298, 1578, 2034
ApaLI GTGCAC 1 cut(s) 1210
ApeKI GCWGC 8 cut(s) 244, 392, 1151, 1154, 1835, 2060, 2300, 2303
ApoI RAATTY 4 cut(s) 1774, 1964, 2252, 2285
ArsI GACNNNNNNTTYG 2 cut(s) 1800, 1832
Asp700I GAANNNNTTC 1 cut(s) 1846
AspLEI GCGC 1 cut(s) 684
AspS9I GGNCC 5 cut(s) 209, 566, 1298, 1528, 1687
AsuHPI GGTGA 2 cut(s) 227, 2002
AsuII TTCGAA 1 cut(s) 1523
AsuNHI GCTAGC 1 cut(s) 1657
AvaII GGWCC 3 cut(s) 566, 1528, 1687
AxyI CCTNAGG 2 cut(s) 657, 677
BaeGI GKGCMC 2 cut(s) 822, 1214
BanI GGYRCC 1 cut(s) 819
BanII GRGCYC 2 cut(s) 421, 1890
BarI GAAGNNNNNNTAC 2 cut(s) 1997, 2029
BbsI GAAGAC 2 cut(s) 344, 424
Bbv12I GWGCWC 5 cut(s) 421, 675, 1214, 1508, 1890
BbvI GCAGC 8 cut(s) 231, 404, 1141, 1163, 1822, 2047, 2287, 2315
BccI CCATC 5 cut(s) 224, 979, 1364, 2020, 2142
BceAI ACGGC 1 cut(s) 2021
BciT130I CCWGG 4 cut(s) 239, 705, 1035, 1518
BciVI GTATCC 1 cut(s) 851
BcoDI GTCTC 3 cut(s) 151, 1052, 2225
BcuI ACTAGT 3 cut(s) 197, 1021, 1090
BfaI CTAG 8 cut(s) 198, 767, 1022, 1091, 1139, 1658, 2127, 2291
BfmI CTRYAG 5 cut(s) 152, 426, 939, 2244, 2301
BfuAI ACCTGC 1 cut(s) 946
BfuI GTATCC 1 cut(s) 851
BglI GCCNNNNNGGC 1 cut(s) 1306
BglII AGATCT 1 cut(s) 1717
BisI GCNGC 8 cut(s) 245, 393, 1152, 1155, 1836, 2061, 2301, 2304
BlpI GCTNAGC 1 cut(s) 1554
BlsI GCNGC 8 cut(s) 246, 394, 1153, 1156, 1837, 2062, 2302, 2305
BmcAI AGTACT 2 cut(s) 1334, 2328
Bme1390I CCNGG 4 cut(s) 239, 705, 1035, 1518
Bme18I GGWCC 3 cut(s) 566, 1528, 1687
BmgT120I GGNCC 5 cut(s) 209, 566, 1298, 1528, 1687
BmiI GGNNCC 4 cut(s) 567, 821, 1688, 1696
BmrFI CCNGG 4 cut(s) 239, 705, 1035, 1518
BmrI ACTGGG 1 cut(s) 792
BmsI GCATC 2 cut(s) 241, 1132
BmtI GCTAGC 1 cut(s) 1661
BmuI ACTGGG 1 cut(s) 792
BpiI GAAGAC 2 cut(s) 344, 424
BplI GAGNNNNNCTC 2 cut(s) 1495, 1527
BpmI CTGGAG 3 cut(s) 260, 630, 1500
Bpu1102I GCTNAGC 1 cut(s) 1554
Bpu14I TTCGAA 1 cut(s) 1523
BpuEI CTTGAG 3 cut(s) 189, 614, 2249
Bsa29I ATCGAT 3 cut(s) 333, 948, 1437
BsaAI YACGTR 1 cut(s) 1294
BsaBI GATNNNNATC 1 cut(s) 624
BsaHI GRCGYC 1 cut(s) 1309
BsaI GGTCTC 1 cut(s) 1052
BsaJI CCNNGG 4 cut(s) 646, 1185, 1690, 2349
BsaWI WCCGGW 1 cut(s) 1193
BsaXI ACNNNNNCTCC 8 cut(s) 1498, 1528, 1679, 1709, 2022, 2052, 2229, 2259
Bsc4I CCNNNNNNNGG 5 cut(s) 578, 1133, 1517, 1587, 2233
Bse1I ACTGG 4 cut(s) 787, 1407, 2073, 2168
Bse21I CCTNAGG 2 cut(s) 657, 677
Bse3DI GCAATG 1 cut(s) 1077
Bse8I GATNNNNATC 1 cut(s) 624
BseBI CCWGG 4 cut(s) 239, 705, 1035, 1518
BseCI ATCGAT 3 cut(s) 333, 948, 1437
BseDI CCNNGG 4 cut(s) 646, 1185, 1690, 2349
BseGI GGATG 7 cut(s) 588, 766, 876, 1009, 1126, 1375, 1398
BseJI GATNNNNATC 1 cut(s) 624
BseLI CCNNNNNNNGG 5 cut(s) 578, 1133, 1517, 1587, 2233
BseMI GCAATG 1 cut(s) 1077
BseMII CTCAG 7 cut(s) 648, 691, 933, 1047, 1455, 1493, 1568
BseNI ACTGG 4 cut(s) 787, 1407, 2073, 2168
BseRI GAGGAG 3 cut(s) 665, 1503, 2275
BseSI GKGCMC 2 cut(s) 822, 1214
BseXI GCAGC 8 cut(s) 231, 404, 1141, 1163, 1822, 2047, 2287, 2315
Bsh1236I CGCG 1 cut(s) 684
Bsh1285I CGRYCG 1 cut(s) 1161
BshFI GGCC 5 cut(s) 210, 703, 1300, 1580, 2036
BshNI GGYRCC 1 cut(s) 819
BshVI ATCGAT 3 cut(s) 333, 948, 1437
BsiEI CGRYCG 1 cut(s) 1161
BsiHKAI GWGCWC 5 cut(s) 421, 675, 1214, 1508, 1890
BsiSI CCGG 2 cut(s) 1194, 2106
BslFI GGGAC 2 cut(s) 1687, 1700
BslI CCNNNNNNNGG 5 cut(s) 578, 1133, 1517, 1587, 2233
BsmAI GTCTC 3 cut(s) 151, 1052, 2225
BsmBI CGTCTC 1 cut(s) 2225
BsmFI GGGAC 2 cut(s) 1687, 1700
BsnI GGCC 5 cut(s) 210, 703, 1300, 1580, 2036
Bso31I GGTCTC 1 cut(s) 1052
Bsp119I TTCGAA 1 cut(s) 1523
Bsp1286I GDGCHC 6 cut(s) 421, 675, 822, 1214, 1508, 1890
Bsp1407I TGTACA 1 cut(s) 1452
Bsp143I GATC 7 cut(s) 6, 295, 531, 625, 1158, 1434, 1717
Bsp1720I GCTNAGC 1 cut(s) 1554
BspACI CCGC 2 cut(s) 54, 83
BspANI GGCC 5 cut(s) 210, 703, 1300, 1580, 2036
BspCNI CTCAG 7 cut(s) 649, 690, 932, 1048, 1456, 1494, 1567
BspDI ATCGAT 3 cut(s) 333, 948, 1437
BspFNI CGCG 1 cut(s) 684
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 4 cut(s) 567, 821, 1688, 1696
BspMAI CTGCAG 3 cut(s) 156, 943, 2305
BspMI ACCTGC 1 cut(s) 946
BspOI GCTAGC 1 cut(s) 1661
BspPI GGATC 4 cut(s) 303, 539, 633, 1442
BspT104I TTCGAA 1 cut(s) 1523
BspT107I GGYRCC 1 cut(s) 819
BspTNI GGTCTC 1 cut(s) 1052
BsrDI GCAATG 1 cut(s) 1077
BsrGI TGTACA 1 cut(s) 1452
BsrI ACTGG 4 cut(s) 787, 1407, 2073, 2168
BssECI CCNNGG 4 cut(s) 646, 1185, 1690, 2349
BssMI GATC 7 cut(s) 6, 295, 531, 625, 1158, 1434, 1717
BssNI GRCGYC 1 cut(s) 1309
BssT1I CCWWGG 3 cut(s) 646, 1690, 2349
Bst2UI CCWGG 4 cut(s) 239, 705, 1035, 1518
Bst6I CTCTTC 2 cut(s) 285, 1727
BstACI GRCGYC 1 cut(s) 1309
BstAUI TGTACA 1 cut(s) 1452
BstBAI YACGTR 1 cut(s) 1294
BstBI TTCGAA 1 cut(s) 1523
BstC8I GCNNGC 3 cut(s) 742, 1017, 1659
BstDEI CTNAG 8 cut(s) 657, 677, 919, 1056, 1464, 1502, 1554, 1795
BstDSI CCRYGG 1 cut(s) 1185
BstENI CCTNNNNNAGG 1 cut(s) 1515
BstF5I GGATG 7 cut(s) 588, 766, 876, 1009, 1126, 1375, 1398
BstFNI CGCG 1 cut(s) 684
BstHHI GCGC 1 cut(s) 684
BstKTI GATC 7 cut(s) 9, 298, 534, 628, 1161, 1437, 1720
BstMAI GTCTC 3 cut(s) 151, 1052, 2225
BstMBI GATC 7 cut(s) 6, 295, 531, 625, 1158, 1434, 1717
BstMCI CGRYCG 1 cut(s) 1161
BstMWI GCNNNNNNNGC 3 cut(s) 679, 1151, 1306
BstNI CCWGG 4 cut(s) 239, 705, 1035, 1518
BstNSI RCATGY 1 cut(s) 893
BstSCI CCNGG 4 cut(s) 237, 703, 1033, 1516
BstSFI CTRYAG 5 cut(s) 152, 426, 939, 2244, 2301
BstSLI GKGCMC 2 cut(s) 822, 1214
BstSNI TACGTA 1 cut(s) 1294
BstUI CGCG 1 cut(s) 684
BstV1I GCAGC 8 cut(s) 231, 404, 1141, 1163, 1822, 2047, 2287, 2315
BstV2I GAAGAC 2 cut(s) 344, 424
BstX2I RGATCY 2 cut(s) 625, 1717
BstXI CCANNNNNNTGG 2 cut(s) 1389, 2175
BstYI RGATCY 2 cut(s) 625, 1717
Bsu15I ATCGAT 3 cut(s) 333, 948, 1437
Bsu36I CCTNAGG 2 cut(s) 657, 677
BsuI GTATCC 1 cut(s) 851
BsuRI GGCC 5 cut(s) 210, 703, 1300, 1580, 2036
BsuTUI ATCGAT 3 cut(s) 333, 948, 1437
BtgI CCRYGG 1 cut(s) 1185
BtsCI GGATG 7 cut(s) 588, 766, 876, 1009, 1126, 1375, 1398
BtsI GCAGTG 2 cut(s) 554, 1626
BtsIMutI CAGTG 5 cut(s) 532, 554, 1626, 2080, 2175
BveI ACCTGC 1 cut(s) 946
Cac8I GCNNGC 3 cut(s) 742, 1017, 1659
CciI TCATGA 1 cut(s) 298
CfoI GCGC 1 cut(s) 684
Cfr13I GGNCC 5 cut(s) 209, 566, 1298, 1528, 1687
ClaI ATCGAT 3 cut(s) 333, 948, 1437
CseI GACGC 1 cut(s) 1298
Csp6I GTAC 7 cut(s) 764, 916, 1333, 1453, 2005, 2152, 2327
CviAII CATG 8 cut(s) 299, 890, 924, 1117, 1576, 1654, 1939, 2282
CviQI GTAC 7 cut(s) 764, 916, 1333, 1453, 2005, 2152, 2327
DdeI CTNAG 8 cut(s) 657, 677, 919, 1056, 1464, 1502, 1554, 1795
DpnI GATC 7 cut(s) 8, 297, 533, 627, 1160, 1436, 1719
DpnII GATC 7 cut(s) 6, 295, 531, 625, 1158, 1434, 1717
DraI TTTAAA 1 cut(s) 384
EaeI YGGCCR 1 cut(s) 2034
Eam1104I CTCTTC 2 cut(s) 285, 1727
EarI CTCTTC 2 cut(s) 285, 1727
Ecl136II GAGCTC 2 cut(s) 419, 1888
Eco105I TACGTA 1 cut(s) 1294
Eco130I CCWWGG 3 cut(s) 646, 1690, 2349
Eco24I GRGCYC 2 cut(s) 421, 1890
Eco31I GGTCTC 1 cut(s) 1052
Eco47I GGWCC 3 cut(s) 566, 1528, 1687
Eco53kI GAGCTC 2 cut(s) 419, 1888
Eco57I CTGAAG 2 cut(s) 84, 1289
Eco81I CCTNAGG 2 cut(s) 657, 677
EcoICRI GAGCTC 2 cut(s) 419, 1888
EcoNI CCTNNNNNAGG 1 cut(s) 1515
EcoO109I RGGNCCY 4 cut(s) 209, 566, 1528, 1687
EcoRI GAATTC 1 cut(s) 1774
EcoRII CCWGG 4 cut(s) 237, 703, 1033, 1516
EcoT14I CCWWGG 3 cut(s) 646, 1690, 2349
EcoT22I ATGCAT 1 cut(s) 1577
EcoT38I GRGCYC 2 cut(s) 421, 1890
ErhI CCWWGG 3 cut(s) 646, 1690, 2349
Esp3I CGTCTC 1 cut(s) 2225
FaeI CATG 8 cut(s) 302, 893, 927, 1120, 1579, 1657, 1942, 2285
FalI AAGNNNNNCTT 2 cut(s) 488, 520
FaqI GGGAC 2 cut(s) 1687, 1700
FatI CATG 8 cut(s) 298, 889, 923, 1116, 1575, 1653, 1938, 2281
Fnu4HI GCNGC 8 cut(s) 245, 393, 1152, 1155, 1836, 2061, 2301, 2304
FokI GGATG 7 cut(s) 595, 773, 863, 1016, 1133, 1382, 1405
FriOI GRGCYC 2 cut(s) 421, 1890
Fsp4HI GCNGC 8 cut(s) 245, 393, 1152, 1155, 1836, 2061, 2301, 2304
FspBI CTAG 8 cut(s) 198, 767, 1022, 1091, 1139, 1658, 2127, 2291
GlaI GCGC 1 cut(s) 683
GluI GCNGC 8 cut(s) 245, 393, 1152, 1155, 1836, 2061, 2301, 2304
GsuI CTGGAG 3 cut(s) 260, 630, 1500
HaeIII GGCC 5 cut(s) 210, 703, 1300, 1580, 2036
HapII CCGG 2 cut(s) 1194, 2106
HgaI GACGC 1 cut(s) 1298
HhaI GCGC 1 cut(s) 684
Hin1I GRCGYC 1 cut(s) 1309
Hin1II CATG 8 cut(s) 302, 893, 927, 1120, 1579, 1657, 1942, 2285
Hin6I GCGC 1 cut(s) 682
HinP1I GCGC 1 cut(s) 682
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HpaII CCGG 2 cut(s) 1194, 2106
HphI GGTGA 2 cut(s) 227, 2002
Hpy166II GTNNAC 6 cut(s) 226, 935, 1189, 1212, 1453, 1956
Hpy188I TCNGA 4 cut(s) 371, 849, 955, 1465
Hpy188III TCNNGA 8 cut(s) 299, 322, 466, 656, 855, 1139, 2359, 2374
Hpy8I GTNNAC 6 cut(s) 226, 935, 1189, 1212, 1453, 1956
Hpy99I CGWCG 1 cut(s) 35
HpyAV CCTTC 4 cut(s) 485, 1519, 2023, 2060
HpyCH4IV ACGT 4 cut(s) 30, 1130, 1293, 2055
HpyF10VI GCNNNNNNNGC 3 cut(s) 679, 1151, 1306
HpyF3I CTNAG 8 cut(s) 657, 677, 919, 1056, 1464, 1502, 1554, 1795
HpySE526I ACGT 4 cut(s) 30, 1130, 1293, 2055
Hsp92I GRCGYC 1 cut(s) 1309
Hsp92II CATG 8 cut(s) 302, 893, 927, 1120, 1579, 1657, 1942, 2285
HspAI GCGC 1 cut(s) 682
Kzo9I GATC 7 cut(s) 6, 295, 531, 625, 1158, 1434, 1717
LmnI GCTCC 6 cut(s) 241, 678, 1700, 1893, 2178, 2262
Lsp1109I GCAGC 8 cut(s) 231, 404, 1141, 1163, 1822, 2047, 2287, 2315
LweI GCATC 2 cut(s) 241, 1132
MaeI CTAG 8 cut(s) 198, 767, 1022, 1091, 1139, 1658, 2127, 2291
MaeII ACGT 4 cut(s) 30, 1130, 1293, 2055
MaeIII GTNAC 5 cut(s) 17, 35, 892, 1402, 2038
MalI GATC 7 cut(s) 8, 297, 533, 627, 1160, 1436, 1719
MboI GATC 7 cut(s) 6, 295, 531, 625, 1158, 1434, 1717
MfeI CAATTG 1 cut(s) 360
MflI RGATCY 2 cut(s) 625, 1717
MhlI GDGCHC 6 cut(s) 421, 675, 822, 1214, 1508, 1890
MlyI GAGTC 1 cut(s) 914
MmeI TCCRAC 4 cut(s) 85, 981, 1377, 2296
Mph1103I ATGCAT 1 cut(s) 1577
MroXI GAANNNNTTC 1 cut(s) 1846
MslI CAYNNNNRTG 1 cut(s) 1652
MspA1I CMGCKG 4 cut(s) 15, 395, 1154, 2306
MspI CCGG 2 cut(s) 1194, 2106
MspR9I CCNGG 4 cut(s) 239, 705, 1035, 1518
MunI CAATTG 1 cut(s) 360
MvaI CCWGG 4 cut(s) 239, 705, 1035, 1518
MvnI CGCG 1 cut(s) 684
MwoI GCNNNNNNNGC 3 cut(s) 679, 1151, 1306
NdeII GATC 7 cut(s) 6, 295, 531, 625, 1158, 1434, 1717
NheI GCTAGC 1 cut(s) 1657
NlaIII CATG 8 cut(s) 302, 893, 927, 1120, 1579, 1657, 1942, 2285
NlaIV GGNNCC 4 cut(s) 567, 821, 1688, 1696
NmuCI GTSAC 3 cut(s) 17, 35, 1402
NsiI ATGCAT 1 cut(s) 1577
NspI RCATGY 1 cut(s) 893
NspV TTCGAA 1 cut(s) 1523
PacI TTAATTAA 1 cut(s) 1329
PagI TCATGA 1 cut(s) 298
PciI ACATGT 1 cut(s) 889
PdmI GAANNNNTTC 1 cut(s) 1846
PflMI CCANNNNNTGG 1 cut(s) 578
PkrI GCNGC 8 cut(s) 246, 394, 1153, 1156, 1837, 2062, 2302, 2305
Ple19I CGATCG 1 cut(s) 1161
PleI GAGTC 1 cut(s) 913
PpsI GAGTC 1 cut(s) 913
Ppu21I YACGTR 1 cut(s) 1294
PpuMI RGGWCCY 3 cut(s) 566, 1528, 1687
PscI ACATGT 1 cut(s) 889
Psp124BI GAGCTC 2 cut(s) 421, 1890
Psp5II RGGWCCY 3 cut(s) 566, 1528, 1687
Psp6I CCWGG 4 cut(s) 237, 703, 1033, 1516
PspGI CCWGG 4 cut(s) 237, 703, 1033, 1516
PspN4I GGNNCC 4 cut(s) 567, 821, 1688, 1696
PspPI GGNCC 5 cut(s) 209, 566, 1298, 1528, 1687
PspPPI RGGWCCY 3 cut(s) 566, 1528, 1687
PstI CTGCAG 3 cut(s) 156, 943, 2305
PsuI RGATCY 2 cut(s) 625, 1717
PvuI CGATCG 1 cut(s) 1161
PvuII CAGCTG 4 cut(s) 15, 395, 1154, 2306
RsaI GTAC 7 cut(s) 765, 917, 1334, 1454, 2006, 2153, 2328
RsaNI GTAC 7 cut(s) 764, 916, 1333, 1453, 2005, 2152, 2327
RseI CAYNNNNRTG 1 cut(s) 1652
SacI GAGCTC 2 cut(s) 421, 1890
SatI GCNGC 8 cut(s) 245, 393, 1152, 1155, 1836, 2061, 2301, 2304
Sau3AI GATC 7 cut(s) 6, 295, 531, 625, 1158, 1434, 1717
Sau96I GGNCC 5 cut(s) 209, 566, 1298, 1528, 1687
ScaI AGTACT 2 cut(s) 1334, 2328
SchI GAGTC 1 cut(s) 914
ScrFI CCNGG 4 cut(s) 239, 705, 1035, 1518
SduI GDGCHC 6 cut(s) 421, 675, 822, 1214, 1508, 1890
SfaNI GCATC 2 cut(s) 241, 1132
SfcI CTRYAG 5 cut(s) 152, 426, 939, 2244, 2301
SfuI TTCGAA 1 cut(s) 1523
SinI GGWCC 3 cut(s) 566, 1528, 1687
SmiI ATTTAAAT 1 cut(s) 384
SmiMI CAYNNNNRTG 1 cut(s) 1652
SmlI CTYRAG 3 cut(s) 204, 629, 2228
SmoI CTYRAG 3 cut(s) 204, 629, 2228
SnaBI TACGTA 1 cut(s) 1294
SpeI ACTAGT 3 cut(s) 197, 1021, 1090
SsiI CCGC 2 cut(s) 54, 83
SspI AATATT 1 cut(s) 388
SspMI CTAG 8 cut(s) 198, 767, 1022, 1091, 1139, 1658, 2127, 2291
SstI GAGCTC 2 cut(s) 421, 1890
StyD4I CCNGG 4 cut(s) 237, 703, 1033, 1516
StyI CCWWGG 3 cut(s) 646, 1690, 2349
SwaI ATTTAAAT 1 cut(s) 384
TaiI ACGT 4 cut(s) 33, 1133, 1296, 2058
TaqII GACCGA 1 cut(s) 23
TatI WGTACW 6 cut(s) 763, 915, 1332, 1452, 2004, 2326
TscAI CASTG 5 cut(s) 532, 561, 1633, 2080, 2175
TseFI GTSAC 3 cut(s) 17, 35, 1402
TseI GCWGC 8 cut(s) 244, 392, 1151, 1154, 1835, 2060, 2300, 2303
Tsp45I GTSAC 3 cut(s) 17, 35, 1402
TspDTI ATGAA 6 cut(s) 467, 653, 1105, 1137, 1208, 2298
TspRI CASTG 5 cut(s) 532, 561, 1633, 2080, 2175
Van91I CCANNNNNTGG 1 cut(s) 578
VneI GTGCAC 1 cut(s) 1210
VpaK11BI GGWCC 3 cut(s) 566, 1528, 1687
XagI CCTNNNNNAGG 1 cut(s) 1515
XapI RAATTY 4 cut(s) 1774, 1964, 2252, 2285
XbaI TCTAGA 1 cut(s) 1138
XceI RCATGY 1 cut(s) 893
XcmI CCANNNNNNNNNTGG 2 cut(s) 595, 1114
XmnI GAANNNNTTC 1 cut(s) 1846
XspI CTAG 8 cut(s) 198, 767, 1022, 1091, 1139, 1658, 2127, 2291
ZrmI AGTACT 2 cut(s) 1334, 2328
Zsp2I ATGCAT 1 cut(s) 1577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.