RchiOBHm_Chr5g0011781
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000843
Physical Location & Seq
Forward (+)
7823127 .. 7825286
2160 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29239

Sequence Viewer

Length: 2049 bp
ATGAGCATTCGAGACAAAGGTGGAGGACTCACTACTCATCGTGAAGTTGTTGATGCTTCTGATGAGATGGCGATATGTTCTGTCAGTGCTAAACAGGACGATGGTGTTTTCGCTGAAGATAAGAAGCAGGTTTCAGGAAGTGTGACTTACAATGGTCATGACATGCACGAATTTGTACCTCAGAGAAGTGTTGCATATATCAGTCAACATGATGTTCATATTGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCGGCAAGATGCCAAGGCGCTGGAACTCGTTGTGAGATGCTAGAAGAGTTGAGTAAAAGGGAGAAAGAAGCAATAATTAAGCCTGATATAGACTTGGATATCCACATGAAGGGAATAGCATCAGAAAGCCAAAGGGCGGTATTTGTGTCAAGTTATAGTCTTAAGATTTTGGGACTGAATGGCTGTGGAGATACCTTGGTAGGGGATCAAATGATAAGGGGTATATCTAGAGGACAAAAGAAGCGTATCACAACTGGTGAGATGTTGGTTGGACCTGCTAAGGCACTATTTATGGACGAAATATCGACTAGTTTGGATAGTTCAACAACTTATCAGATAGTAAATTCAATCAAGCCATCTGTTCACATTCTCCAAGGGACTGCTTTCATCTCACTGCTGCAGCCAGCACCTGAGACTTATGATCTATTTGATGACATTTTTCTTCTTTCTGATGGTCAAATCGTGTACCAAGATCGCCGTGAATATATTCTTGACTTTTTCAAATCCATGGGCTTCAGATGTCCCGAGAGAAAAGGTGTGGCCGATTTTCTGCAAGAAGTGACATCAGAGAAAGATCAGGAGCAGTATTGGGGAAGCAGAGATGAGCCTTACAGGTTCATCACAGTCGAAGAATTCTCAGAGGCATTCCAATCTTTTCATGTAGGGGGCACAATTACTAATGAACTTGCAACTCCATTTGACAAGACCAAGAGTCACCCAGCTGCATTATCAACCAATATATATGGTGTTAAAAAAGCAGAACTGGTGAAATCTTGTCTCTCAAAGGAGTTCTTGCTGATGAAGAGGAACTCATTTGTTTACCTTTTCAAGCTTACCCAACAATCAATATTGGCTCTGATTACCATGACACTATTCCTAAGGACTAAGATGCACCATGACACAGTGATTAATGGAGGACTTTATGTTGGTGCGTTGTTCTTCTCCTTGTATACTGTTGTGCTCAATGCAGTGGCAGAGATATCGATGACTGTAGCGAAGCTTCCAGTTTTTTATAAGGAAAGAAAGCTACTCTTTTTGTCCACCATGGGCATATGCACTTCCCACGTGGATCCTCAAGATCCCTCTCACTTGTTGATCAAGCAATACCTTCTACTCCTACTCATGCATCAAATGGCTAATGCATTATTCAAATTCATTGCTGGAACTAGTAGAAGCTTGACTATTGCTAATACACTTGCCTCATTCGCAACATGCATATATGTGGCTTTGGGAGGCTTTATCCTGTCAAGAGGTAATATAAAGAAATGGTGGAAATGGGGCTATTGGATATCACCTTTGATGTATGGGCAGAATGCTATTGTAGTTAATGAGTTCCTTGGCAAGAGTTGGAGACATGAAATTCCAAACTCAACAGAATCATTAGGAATTGCTGTTCTGAAGTCTTGTGGATTCCGTACACATGCGTATTCATATTGGATTGGCACTGGAGCATTGGCTGGATACATGCTCTTTTTCAACATTTGTTACACTCTGGCTCTTACTTATCTAAACCCTTTGGACAAGCCACAAGATGTTAAATCAGAAGAATCTCAAGGCAATAAAGATGATGACAAAAGCTTGACCCCTCAAATCAACAAAGAGAAAGGAGATGGAAGTACTACTCATAACACTAAAAGAGGAATGGTTTTTCTATTTGAACCATATTCCATCACCTTCGATGAAAATCTTAATAGGACTCTGAAGCTTCCTAGTTCAGCAAGAGTTCATCCAATGTTCCATGTGTCCTTGTTGAAGAAGAAAATTGGTGATTCAGCTGTAGTGGTACCCGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

682

Amino Acids

76.28

Weight (kDa)

7.03

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 38 - 185 1.8e-06 ABC transporter
ABC2_membrane PF01061 340 - 438 1.7e-12 ABC-2 type transporter
ABC2_membrane PF01061 449 - 530 1.2e-16 ABC-2 type transporter
PDR_assoc PF08370 535 - 596 1.9e-25 Plant PDR ABC transporter associated
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1269
Acc36I ACCTGC 2 cut(s) 118, 538
Acc65I GGTACC 1 cut(s) 2038
AccB1I GGYRCC 1 cut(s) 2038
AccI GTMKAC 1 cut(s) 1205
AciI CCGC 1 cut(s) 392
AclWI GGATC 4 cut(s) 468, 1319, 1328, 1332
AcoI YGGCCR 1 cut(s) 795
AcsI RAATTY 5 cut(s) 170, 598, 887, 1406, 1614
AcuI CTGAAG 4 cut(s) 135, 754, 1673, 1976
AcvI CACGTG 1 cut(s) 1321
AfaI GTAC 5 cut(s) 177, 722, 1672, 1873, 2040
AfiI CCNNNNNNNGG 3 cut(s) 364, 391, 456
AflII CTTAAG 1 cut(s) 416
AgsI TTSAA 8 cut(s) 579, 603, 757, 1084, 1405, 1732, 1913, 2008
AhdI GACNNNNNGTC 1 cut(s) 966
AhlI ACTAGT 2 cut(s) 563, 1421
AloI GAACNNNNNNTCC 2 cut(s) 1632, 1664
AluBI AGCT 8 cut(s) 977, 1087, 1255, 1282, 1431, 1833, 1960, 2030
AluI AGCT 8 cut(s) 977, 1087, 1255, 1282, 1431, 1833, 1960, 2030
Alw21I GWGCWC 1 cut(s) 1218
Alw26I GTCTC 4 cut(s) 6, 662, 1037, 1600
AlwI GGATC 4 cut(s) 468, 1319, 1328, 1332
AlwNI CAGNNNCTG 1 cut(s) 665
Ama87I CYCGRG 1 cut(s) 779
AoxI GGCC 1 cut(s) 795
ApeKI GCWGC 3 cut(s) 652, 655, 977
ApoI RAATTY 5 cut(s) 170, 598, 887, 1406, 1614
AseI ATTAAT 1 cut(s) 1164
Asp700I GAANNNNTTC 1 cut(s) 741
Asp718I GGTACC 1 cut(s) 2038
AspLEI GCGC 1 cut(s) 275
AspS9I GGNCC 1 cut(s) 527
AsuC2I CCSGG 1 cut(s) 2043
AsuHPI GGTGA 6 cut(s) 524, 962, 1033, 1539, 1918, 2033
AvaI CYCGRG 1 cut(s) 779
AvaII GGWCC 1 cut(s) 527
AxyI CCTNAGG 1 cut(s) 1133
BaeGI GKGCMC 1 cut(s) 926
BaeI ACNNNNGTAYC 2 cut(s) 438, 471
BamHI GGATCC 1 cut(s) 1324
BanI GGYRCC 1 cut(s) 2038
BarI GAAGNNNNNNTAC 2 cut(s) 1239, 1271
BbrPI CACGTG 1 cut(s) 1321
Bbv12I GWGCWC 1 cut(s) 1218
BbvI GCAGC 3 cut(s) 639, 667, 964
BccI CCATC 6 cut(s) 61, 95, 619, 701, 1859, 1931
BceAI ACGGC 1 cut(s) 717
BcgI CGANNNNNNTGC 2 cut(s) 1218, 1252
BciVI GTATCC 1 cut(s) 1709
BclI TGATCA 1 cut(s) 1350
BcnI CCSGG 1 cut(s) 2043
BcoDI GTCTC 4 cut(s) 6, 662, 1037, 1600
BcuI ACTAGT 2 cut(s) 563, 1421
BfaI CTAG 5 cut(s) 296, 483, 564, 1422, 1965
BfmI CTRYAG 3 cut(s) 653, 1245, 2031
BfoI RGCGCY 1 cut(s) 276
BfrI CTTAAG 1 cut(s) 416
BfuAI ACCTGC 2 cut(s) 118, 538
BfuI GTATCC 1 cut(s) 1709
BisI GCNGC 3 cut(s) 653, 656, 978
BlsI GCNGC 3 cut(s) 654, 657, 979
BmcAI AGTACT 1 cut(s) 1873
Bme1390I CCNGG 1 cut(s) 2043
Bme18I GGWCC 1 cut(s) 527
BmeRI GACNNNNNGTC 1 cut(s) 966
BmeT110I CYCGRG 1 cut(s) 779
BmgT120I GGNCC 1 cut(s) 527
BmiI GGNNCC 2 cut(s) 1326, 2040
BmrFI CCNGG 1 cut(s) 2043
BmsI GCATC 6 cut(s) 43, 254, 282, 383, 1134, 1390
BpmI CTGGAG 1 cut(s) 1722
Bpu10I CCTNAGC 1 cut(s) 534
BpuEI CTTGAG 2 cut(s) 1314, 1791
BpuMI CCSGG 1 cut(s) 2043
Bsa29I ATCGAT 1 cut(s) 1238
BsaAI YACGTR 1 cut(s) 1321
BsaBI GATNNNNATC 1 cut(s) 1938
BsaJI CCNNGG 7 cut(s) 246, 268, 450, 628, 762, 1299, 1591
Bsc4I CCNNNNNNNGG 3 cut(s) 364, 391, 456
Bse1I ACTGG 4 cut(s) 514, 1023, 1259, 1705
Bse21I CCTNAGG 1 cut(s) 1133
Bse3DI GCAATG 1 cut(s) 1410
Bse8I GATNNNNATC 1 cut(s) 1938
BseCI ATCGAT 1 cut(s) 1238
BseDI CCNNGG 7 cut(s) 246, 268, 450, 628, 762, 1299, 1591
BseGI GGATG 1 cut(s) 1981
BseJI GATNNNNATC 1 cut(s) 1938
BseLI CCNNNNNNNGG 3 cut(s) 364, 391, 456
BseMI GCAATG 1 cut(s) 1410
BseMII CTCAG 3 cut(s) 194, 657, 906
BseNI ACTGG 4 cut(s) 514, 1023, 1259, 1705
BseSI GKGCMC 1 cut(s) 926
BseXI GCAGC 3 cut(s) 639, 667, 964
BseYI CCCAGC 1 cut(s) 973
BshFI GGCC 1 cut(s) 797
BshNI GGYRCC 1 cut(s) 2038
BshVI ATCGAT 1 cut(s) 1238
BsiHKAI GWGCWC 1 cut(s) 1218
BsiHKCI CYCGRG 1 cut(s) 779
BsiSI CCGG 1 cut(s) 2043
BslFI GGGAC 3 cut(s) 441, 646, 762
BslI CCNNNNNNNGG 3 cut(s) 364, 391, 456
BsmAI GTCTC 4 cut(s) 6, 662, 1037, 1600
BsmFI GGGAC 3 cut(s) 441, 646, 762
BsmI GAATGC 3 cut(s) 6, 899, 1573
BsnI GGCC 1 cut(s) 797
BsoBI CYCGRG 1 cut(s) 779
Bsp1286I GDGCHC 2 cut(s) 926, 1218
Bsp143I GATC 7 cut(s) 460, 676, 727, 829, 1324, 1333, 1350
Bsp19I CCATGG 2 cut(s) 762, 1299
BspACI CCGC 1 cut(s) 392
BspANI GGCC 1 cut(s) 797
BspCNI CTCAG 3 cut(s) 193, 658, 905
BspDI ATCGAT 1 cut(s) 1238
BspHI TCATGA 1 cut(s) 157
BspLI GGNNCC 2 cut(s) 1326, 2040
BspMAI CTGCAG 1 cut(s) 657
BspMI ACCTGC 2 cut(s) 118, 538
BspPI GGATC 4 cut(s) 468, 1319, 1328, 1332
BspT107I GGYRCC 1 cut(s) 2038
BspTI CTTAAG 1 cut(s) 416
BsrDI GCAATG 1 cut(s) 1410
BsrI ACTGG 4 cut(s) 514, 1023, 1259, 1705
BssECI CCNNGG 7 cut(s) 246, 268, 450, 628, 762, 1299, 1591
BssMI GATC 7 cut(s) 460, 676, 727, 829, 1324, 1333, 1350
BssNAI GTATAC 1 cut(s) 1206
BssT1I CCWWGG 7 cut(s) 246, 268, 450, 628, 762, 1299, 1591
Bst1107I GTATAC 1 cut(s) 1206
Bst4CI ACNGT 5 cut(s) 235, 880, 1159, 1210, 1246
Bst6I CTCTTC 2 cut(s) 294, 1052
BstAFI CTTAAG 1 cut(s) 416
BstBAI YACGTR 1 cut(s) 1321
BstC8I GCNNGC 1 cut(s) 660
BstDEI CTNAG 6 cut(s) 180, 534, 666, 892, 1133, 1140
BstDSI CCRYGG 2 cut(s) 762, 1299
BstF5I GGATG 1 cut(s) 1981
BstH2I RGCGCY 1 cut(s) 276
BstHHI GCGC 1 cut(s) 275
BstKTI GATC 7 cut(s) 463, 679, 730, 832, 1327, 1336, 1353
BstMAI GTCTC 4 cut(s) 6, 662, 1037, 1600
BstMBI GATC 7 cut(s) 460, 676, 727, 829, 1324, 1333, 1350
BstMWI GCNNNNNNNGC 2 cut(s) 257, 1460
BstNSI RCATGY 4 cut(s) 166, 1470, 1679, 1723
BstSCI CCNGG 1 cut(s) 2041
BstSFI CTRYAG 3 cut(s) 653, 1245, 2031
BstSLI GKGCMC 1 cut(s) 926
BstV1I GCAGC 3 cut(s) 639, 667, 964
BstX2I RGATCY 2 cut(s) 1324, 1333
BstXI CCANNNNNNTGG 1 cut(s) 275
BstYI RGATCY 2 cut(s) 1324, 1333
BstZ17I GTATAC 1 cut(s) 1206
Bsu15I ATCGAT 1 cut(s) 1238
Bsu36I CCTNAGG 1 cut(s) 1133
BsuI GTATCC 1 cut(s) 1709
BsuRI GGCC 1 cut(s) 797
BsuTUI ATCGAT 1 cut(s) 1238
BtgI CCRYGG 2 cut(s) 762, 1299
BtsCI GGATG 1 cut(s) 1981
BtsI GCAGTG 2 cut(s) 647, 1230
BtsIMutI CAGTG 5 cut(s) 91, 647, 1164, 1230, 1698
BveI ACCTGC 2 cut(s) 118, 538
Cac8I GCNNGC 1 cut(s) 660
CaiI CAGNNNCTG 1 cut(s) 665
CciI TCATGA 1 cut(s) 157
CfoI GCGC 1 cut(s) 275
Cfr13I GGNCC 1 cut(s) 527
ClaI ATCGAT 1 cut(s) 1238
Csp6I GTAC 5 cut(s) 176, 721, 1671, 1872, 2039
CviQI GTAC 5 cut(s) 176, 721, 1671, 1872, 2039
DdeI CTNAG 6 cut(s) 180, 534, 666, 892, 1133, 1140
DpnI GATC 7 cut(s) 462, 678, 729, 831, 1326, 1335, 1352
DpnII GATC 7 cut(s) 460, 676, 727, 829, 1324, 1333, 1350
DriI GACNNNNNGTC 1 cut(s) 966
EaeI YGGCCR 1 cut(s) 795
Eam1104I CTCTTC 2 cut(s) 294, 1052
Eam1105I GACNNNNNGTC 1 cut(s) 966
EarI CTCTTC 2 cut(s) 294, 1052
Eco130I CCWWGG 7 cut(s) 246, 268, 450, 628, 762, 1299, 1591
Eco32I GATATC 3 cut(s) 355, 1236, 1545
Eco47I GGWCC 1 cut(s) 527
Eco57I CTGAAG 4 cut(s) 135, 754, 1673, 1976
Eco72I CACGTG 1 cut(s) 1321
Eco81I CCTNAGG 1 cut(s) 1133
Eco88I CYCGRG 1 cut(s) 779
EcoRI GAATTC 1 cut(s) 887
EcoRV GATATC 3 cut(s) 355, 1236, 1545
EcoT14I CCWWGG 7 cut(s) 246, 268, 450, 628, 762, 1299, 1591
EcoT22I ATGCAT 3 cut(s) 1383, 1399, 1472
ErhI CCWWGG 7 cut(s) 246, 268, 450, 628, 762, 1299, 1591
FalI AAGNNNNNCTT 6 cut(s) 130, 162, 1031, 1063, 1271, 1303
FaqI GGGAC 3 cut(s) 441, 646, 762
FauNDI CATATG 1 cut(s) 1307
FbaI TGATCA 1 cut(s) 1350
FblI GTMKAC 1 cut(s) 1205
Fnu4HI GCNGC 3 cut(s) 653, 656, 978
FokI GGATG 1 cut(s) 1968
Fsp4HI GCNGC 3 cut(s) 653, 656, 978
FspBI CTAG 5 cut(s) 296, 483, 564, 1422, 1965
GlaI GCGC 1 cut(s) 274
GluI GCNGC 3 cut(s) 653, 656, 978
GsaI CCCAGC 1 cut(s) 977
GsuI CTGGAG 1 cut(s) 1722
HaeII RGCGCY 1 cut(s) 276
HaeIII GGCC 1 cut(s) 797
HapII CCGG 1 cut(s) 2043
HhaI GCGC 1 cut(s) 275
Hin6I GCGC 1 cut(s) 273
HinP1I GCGC 1 cut(s) 273
HincII GTYRAC 1 cut(s) 206
HindII GTYRAC 1 cut(s) 206
HindIII AAGCTT 5 cut(s) 1085, 1253, 1429, 1831, 1958
HinfI GANTC 7 cut(s) 27, 967, 1631, 1665, 1802, 1951, 2024
HpaII CCGG 1 cut(s) 2043
HphI GGTGA 6 cut(s) 524, 962, 1033, 1539, 1918, 2033
Hpy166II GTNNAC 7 cut(s) 206, 619, 721, 1075, 1206, 1296, 1673
Hpy8I GTNNAC 7 cut(s) 206, 619, 721, 1075, 1206, 1296, 1673
HpyAV CCTTC 3 cut(s) 358, 1373, 1939
HpyCH4III ACNGT 5 cut(s) 235, 880, 1159, 1210, 1246
HpyCH4IV ACGT 1 cut(s) 1320
HpyF10VI GCNNNNNNNGC 2 cut(s) 257, 1460
HpyF3I CTNAG 6 cut(s) 180, 534, 666, 892, 1133, 1140
HpySE526I ACGT 1 cut(s) 1320
HspAI GCGC 1 cut(s) 273
KpnI GGTACC 1 cut(s) 2042
Ksp22I TGATCA 1 cut(s) 1350
Kzo9I GATC 7 cut(s) 460, 676, 727, 829, 1324, 1333, 1350
LmnI GCTCC 2 cut(s) 835, 1703
Lsp1109I GCAGC 3 cut(s) 639, 667, 964
LweI GCATC 6 cut(s) 43, 254, 282, 383, 1134, 1390
MaeI CTAG 5 cut(s) 296, 483, 564, 1422, 1965
MaeII ACGT 1 cut(s) 1320
MaeIII GTNAC 4 cut(s) 142, 814, 968, 1739
MalI GATC 7 cut(s) 462, 678, 729, 831, 1326, 1335, 1352
MboI GATC 7 cut(s) 460, 676, 727, 829, 1324, 1333, 1350
MboII GAAGA 9 cut(s) 128, 311, 689, 896, 1069, 1186, 1811, 2020, 2023
MflI RGATCY 2 cut(s) 1324, 1333
MhlI GDGCHC 2 cut(s) 926, 1218
MluCI AATT 9 cut(s) 170, 330, 598, 887, 927, 1406, 1614, 1641, 2016
MlyI GAGTC 3 cut(s) 21, 976, 1945
MmeI TCCRAC 2 cut(s) 505, 1583
Mph1103I ATGCAT 3 cut(s) 1383, 1399, 1472
MroXI GAANNNNTTC 1 cut(s) 741
MseI TTAA 7 cut(s) 333, 417, 1005, 1164, 1581, 1791, 1944
MslI CAYNNNNRTG 1 cut(s) 1475
MspA1I CMGCKG 2 cut(s) 977, 2030
MspCI CTTAAG 1 cut(s) 416
MspI CCGG 1 cut(s) 2043
MspR9I CCNGG 1 cut(s) 2043
Mva1269I GAATGC 3 cut(s) 6, 899, 1573
MwoI GCNNNNNNNGC 2 cut(s) 257, 1460
NciI CCSGG 1 cut(s) 2043
NcoI CCATGG 2 cut(s) 762, 1299
NdeI CATATG 1 cut(s) 1307
NdeII GATC 7 cut(s) 460, 676, 727, 829, 1324, 1333, 1350
NlaIV GGNNCC 2 cut(s) 1326, 2040
NmuCI GTSAC 3 cut(s) 142, 814, 968
NsiI ATGCAT 3 cut(s) 1383, 1399, 1472
NspI RCATGY 4 cut(s) 166, 1470, 1679, 1723
PagI TCATGA 1 cut(s) 157
PctI GAATGC 3 cut(s) 6, 899, 1573
PdmI GAANNNNTTC 1 cut(s) 741
PfeI GAWTC 4 cut(s) 1631, 1665, 1802, 2024
PkrI GCNGC 3 cut(s) 654, 657, 979
PleI GAGTC 3 cut(s) 21, 975, 1945
PmaCI CACGTG 1 cut(s) 1321
PmlI CACGTG 1 cut(s) 1321
PpsI GAGTC 3 cut(s) 21, 975, 1945
Ppu21I YACGTR 1 cut(s) 1321
PshBI ATTAAT 1 cut(s) 1164
PsiI TTATAA 1 cut(s) 1269
PspCI CACGTG 1 cut(s) 1321
PspFI CCCAGC 1 cut(s) 973
PspN4I GGNNCC 2 cut(s) 1326, 2040
PspPI GGNCC 1 cut(s) 527
PstI CTGCAG 1 cut(s) 657
PstNI CAGNNNCTG 1 cut(s) 665
PsuI RGATCY 2 cut(s) 1324, 1333
PvuII CAGCTG 2 cut(s) 977, 2030
RsaI GTAC 5 cut(s) 177, 722, 1672, 1873, 2040
RsaNI GTAC 5 cut(s) 176, 721, 1671, 1872, 2039
RseI CAYNNNNRTG 1 cut(s) 1475
SaqAI TTAA 7 cut(s) 333, 417, 1005, 1164, 1581, 1791, 1944
SatI GCNGC 3 cut(s) 653, 656, 978
Sau3AI GATC 7 cut(s) 460, 676, 727, 829, 1324, 1333, 1350
Sau96I GGNCC 1 cut(s) 527
ScaI AGTACT 1 cut(s) 1873
SchI GAGTC 3 cut(s) 21, 976, 1945
ScrFI CCNGG 1 cut(s) 2043
SduI GDGCHC 2 cut(s) 926, 1218
SfaNI GCATC 6 cut(s) 43, 254, 282, 383, 1134, 1390
SfcI CTRYAG 3 cut(s) 653, 1245, 2031
SinI GGWCC 1 cut(s) 527
SmiMI CAYNNNNRTG 1 cut(s) 1475
SmlI CTYRAG 3 cut(s) 416, 1329, 1806
SmoI CTYRAG 3 cut(s) 416, 1329, 1806
SpeI ACTAGT 2 cut(s) 563, 1421
Sse9I AATT 9 cut(s) 170, 330, 598, 887, 927, 1406, 1614, 1641, 2016
SsiI CCGC 1 cut(s) 392
SspI AATATT 1 cut(s) 1104
SspMI CTAG 5 cut(s) 296, 483, 564, 1422, 1965
StyD4I CCNGG 1 cut(s) 2041
StyI CCWWGG 7 cut(s) 246, 268, 450, 628, 762, 1299, 1591
TaaI ACNGT 5 cut(s) 235, 880, 1159, 1210, 1246
TaiI ACGT 1 cut(s) 1323
TaqI TCGA 5 cut(s) 10, 560, 882, 1238, 1932
TasI AATT 9 cut(s) 170, 330, 598, 887, 927, 1406, 1614, 1641, 2016
TatI WGTACW 1 cut(s) 1871
TfiI GAWTC 4 cut(s) 1631, 1665, 1802, 2024
Tru1I TTAA 7 cut(s) 333, 417, 1005, 1164, 1581, 1791, 1944
Tru9I TTAA 7 cut(s) 333, 417, 1005, 1164, 1581, 1791, 1944
TscAI CASTG 5 cut(s) 91, 654, 1164, 1230, 1705
TseFI GTSAC 3 cut(s) 142, 814, 968
TseI GCWGC 3 cut(s) 652, 655, 977
Tsp45I GTSAC 3 cut(s) 142, 814, 968
TspGWI ACGGA 1 cut(s) 1658
TspRI CASTG 5 cut(s) 91, 654, 1164, 1230, 1705
Vha464I CTTAAG 1 cut(s) 416
VpaK11BI GGWCC 1 cut(s) 527
VspI ATTAAT 1 cut(s) 1164
XapI RAATTY 5 cut(s) 170, 598, 887, 1406, 1614
XbaI TCTAGA 1 cut(s) 482
XceI RCATGY 4 cut(s) 166, 1470, 1679, 1723
XmiI GTMKAC 1 cut(s) 1205
XmnI GAANNNNTTC 1 cut(s) 741
XspI CTAG 5 cut(s) 296, 483, 564, 1422, 1965
ZrmI AGTACT 1 cut(s) 1873
Zsp2I ATGCAT 3 cut(s) 1383, 1399, 1472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.