RchiOBHm_Chr6g0286071
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
49332327 .. 49338820
6494 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25661

Sequence Viewer

Length: 4200 bp
ATGGAGATCATCAGCTGTGACCTTGAAAACGTCGGTCACAGTTTCCACCAAAGCGGTTCGTTTTGGACTGACAATGGCAGGGCGGTTTTCTCAACATCTTCAGTTGGAGAGGACAACGAGGACGATGAGGAAGCTCTCAAATGGGAAGCTCTGCAGAGACTTCCTACTTTCACTCGTTTGAAAAAGGGGTTGCTCACTAGTCCTCAAGGCCCTGCCATCGAAGTTGACTTGCATCACCTGGAGCTGCAAGAAAGGAAAGGCTTGATTGAGAGGCTTGTGGGAGTAGTCGAAGAGGATCATGAGAACTTCTTGTTGAGGTTCAAGAATCGAATCGATAGAGTTGGGATTAGTCTTCCTACAATTGAAGTCAGATTCGAGCATTTAAATATTGCAGCTGAATCTTATATAGGAGGCAGAGCTCTACCTACAGTCTTCAATTACTGTGTTAATTTAGTGGAGGGTTTCTTGAATTACCTTCATATTGTTCCTGTTAAGAAGCAACCCTTGTCTATACTTAAAGATGTCAGTGGGATCATCAAGCCTTGCAGAATGACACTGCTCTTGGGTCCTCCAAGTTCTGGGATGACCACGCTCTTGTTGGCTTTGGCTGGAGAGCTTGATAAGGATCTCAAGGTTTCAGGAAGTGTGACTTACAATGGTCATGACATGCACGAATTTGTACCTCAGAGAAGTGCTGCATATATCAGTCAACATGATGTTCATATCGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCGGCAAGATGCCAAGGCGCGGGAACTCGTTATGAGATGCTAGAAGAGTTAAGTAGAAGAGAGAAAGATGCAAGAATTAAGCCAGATATAGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGCCAAAGGGCAGTATTTGTGACAAGTTATATTCTTAAGATTTTGGGATTGGATGGCTGTGCAGATACCTTGGTAGGGGATCAAATGATAAGGGGTATATCTGGAGGACAAAAGAAGCGTGTCACAACCGGTGAGATGTTGGTTGGACCTGCTAAGGCACTATTCATGGACGAAATATCGACTGGTTTGGATAGTTCAACAACTTATCAAATAGTAAATTCAATCAAGCAATCTGTTCACATTCTCCAAGGGACTGCTTTCATCTCACTGCTGCAGCCAGCACCTGAGACTTATGATCTATTTGATGACATTATTCTTCTTTCTGAAGGTCAAATTGTGTACCAAGGTCCCCGTGAATATGTTCTTGACTTTTTCGAATCCATGGGCTTCAGATGTCCCGAGAGAAAAGGTGTGGCCGATTTTCTGCAAGAAGTGACATCAAAGAAAGATCAGGAGCAGTATTGGGGAAGCAGAGATGAGCCTTACAGGTTCATCACAGTCCAAGAATTCTCGGAGGCATTCCAATCTTTTCATGTAGGGGGCACAATTACTAATGAACTTGCAACTCCATTTGACAAGACCAAGAGTCACCCAGCTGCATTATCAACCAATACATATGGTGTTAAAAAAGCAGAACTGGTGAAAGCTTGTCTCTCAAGGGAGTTCTTGCTGATGAAGAGGAACTCATTTGTTTACCTTTTCAAGCTTACCCAACAATCAATATTGGCTCTGATTACAATGACACTATTCCTAAGGACTAAGATGCACCATGACACAGTGATTAATGGTGGACTTTATGCTGGTGCTTTGTTCTTCTCCTTGTATACTGTTGTGCTCAATGCAGTGGCAGAGATATCGATGACGGTAGCGAAGCTTCCAGTTTTTTTTAAGCAAAGAAAGCTACTCTTTTTTCCACCATGGGCATATGCACTTCCCACGTGGATCCTCAAGATCCCTCTCACCTGTGTTGAAGTTGGTGTTTGGGTATTTATTTCCTATTATGTCATTGGATATGATCCAAATGTTGGAAGGTTGTTCAAGCAATACCTTCTCCTCCTACTCATGCATCAAATGGCTAATGCATTATTCAAATTCATTGCTGGAATTGGTAGAAGCTTGACTATTGCTAATACACTTGCCTCATTCGCAACATGCATATATGTGGCTTTGGGAGGCTTTATCCTGTCAAGAGAGAATATAAAGAAATGGTGGAAATGGGGCTACTGGATATCACCTTTGATGTATGGGCAGAATGCTATTGTAGTTAATGAGTTCCTTGGCAAGAGTTGGAGACATGAAATTCCAAACTCAACAGAATCATTAGGAATTGCTGTTCTGAAGTCTCGTGGATTCCATACACATGCATATTGGTATTGGATTGGCGCTGGAGCATTGGCTGGATACATGCTCTTTTTCAACATTTGTTACACTCTGGCTCTTACTTATCTAAACCAGAAAGGATATGGAAGTACAACTCATAACACTAAAAGAGGAATGGTTCTTCCATTTGAACCATATTCCATCACCTTCGATGAAATCTCATACTCGGTGGACATGCCACAGGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTCCTCAGGCGCGTGAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCTCTTATGGGAGTGAGTGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGAAAAACTGGGGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAGTCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATCGATTCTGAAACACAGAAGATGTTTGTGGAGGAAGTGATGGCACTTGTGGAGTTGGATGTGTTAAGGCACGCACTAGTAGGGTTGCCTGGTGCTAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACGTCAGGTCTAGATGCAAGAGCAGCTGCGATCGTTATGAGAACAGTTAGGAACACCGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATATTTGAATCATTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTAGGGCCATTGGGGCGTCATTCTTGCCATTTAATTAAGTACTTCGAGGGAATTGAAAATGTCAGTAAGATTAAGGATGGCTATAATCCAGCAACTTGGATGTTGGAAGTGACCAGTTCTGCGAAAGAAATCGCTCTGGGGATCGATTTTGCTGATGTGTACAAAAAATCTGAGCTATACAGGAGAAACAGAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGGTTCGAAGGACCTGTATTTCCCTACACAATACGCTCAGCCATTTTTAACACAATGCATGGCCTGTTTATGGAAACAACATTGGTCGTATTGGCGTAATCCACCATACACTGCCATAAAGTTGATATACACAACCATGCTAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAAAGACAAAACAACAAGATCTCTTCAATGTAATTGGTTCTATGTATGCTACGCTTCTCTTTCTCGGTATTAAGAATTCAACAACAGTTCAGTCCTTAGTGTCTGTCGAACGAACAGTCTTTTATAGAGAACGGGCTGCTGGAATGTATTCTCCATTAGCTTATTCGTTTGCACAGGTTGTAATTGAGCTCCCTTATGTTTTTGCTCAAACAATTCTCTATGGTGTCATAGTTTATGCCATGATTGGATTAGAGTGGACTACTAAATTCTTATGGTATCTATTTTTCCTGTTTTTCACACTATTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCGTTACACCAAACCTTCACGTTGCTGCTATAACCACCAGTGCATTTTATTCACTATGGAATCTTTTTTCCGGCTTCTTAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGTATGTCCAGTGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATTCACAGAACAACCTTGAGACGGGAGAAACTGTAGAAGAATTTATGAGGAGCTACTTTGGTTTCAAACATGAATTTCTAGGAGTGGCTGCAGCTGTGGTTGTTGGATTTGCAGTACTCTTTGCATTTATCTTTGCCTTGGCAATCAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1399

Amino Acids

157.94

Weight (kDa)

6.9

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 98 - 146 4.3e-06 ABC-transporter N-terminal
ABC_tran PF00005 172 - 353 2.3e-14 ABC transporter
ABC2_membrane PF01061 508 - 720 2.5e-46 ABC-2 type transporter
PDR_assoc PF08370 725 - 781 7.5e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 831 - 983 2.4e-21 ABC transporter
ABC2_membrane PF01061 1128 - 1341 1.6e-57 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1042, 2761
AccB1I GGYRCC 1 cut(s) 2634
AccB7I CCANNNNNTGG 2 cut(s) 578, 1910
AccI GTMKAC 1 cut(s) 1709
AccII CGCG 2 cut(s) 779, 2499
AciI CCGC 3 cut(s) 54, 83, 779
AclWI GGATC 9 cut(s) 303, 539, 633, 972, 1822, 1831, 1835, 1895, 3257
AcoI YGGCCR 2 cut(s) 1299, 3849
AcsI RAATTY 9 cut(s) 674, 1102, 1391, 1976, 2184, 3589, 3779, 4067, 4100
AcuI CTGAAG 5 cut(s) 84, 1230, 1258, 2243, 3104
AcvI CACGTG 1 cut(s) 1824
AcyI GRCGYC 1 cut(s) 3124
AfiI CCNNNNNNNGG 8 cut(s) 578, 778, 960, 1910, 2948, 3332, 3402, 4048
AflII CTTAAG 1 cut(s) 920
AflIII ACRYGT 1 cut(s) 2704
AgeI ACCGGT 1 cut(s) 1013
AhdI GACNNNNNGTC 1 cut(s) 1470
AhlI ACTAGT 3 cut(s) 197, 2836, 2905
AjnI CCWGG 4 cut(s) 237, 2518, 2848, 3331
AloI GAACNNNNNNTCC 4 cut(s) 2202, 2234, 3931, 3963
Alw21I GWGCWC 6 cut(s) 421, 1722, 2490, 3029, 3323, 3705
Alw26I GTCTC 7 cut(s) 151, 1166, 1541, 2170, 2232, 2867, 4040
Alw44I GTGCAC 1 cut(s) 3025
AlwI GGATC 9 cut(s) 303, 539, 633, 972, 1822, 1831, 1835, 1895, 3257
AlwNI CAGNNNCTG 1 cut(s) 1169
Ama87I CYCGRG 1 cut(s) 1283
AoxI GGCC 6 cut(s) 208, 1299, 2516, 3113, 3393, 3849
ApaLI GTGCAC 1 cut(s) 3025
ApoI RAATTY 9 cut(s) 674, 1102, 1391, 1976, 2184, 3589, 3779, 4067, 4100
ArsI GACNNNNNNTTYG 2 cut(s) 3615, 3647
AseI ATTAAT 1 cut(s) 1668
AsiGI ACCGGT 1 cut(s) 1013
Asp700I GAANNNNTTC 2 cut(s) 1245, 3661
AspLEI GCGC 3 cut(s) 779, 2270, 2499
AspS9I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3113, 3343, 3502
AsuHPI GGTGA 8 cut(s) 227, 1028, 1466, 1537, 1837, 2109, 2401, 3817
AsuII TTCGAA 2 cut(s) 1260, 3338
AsuNHI GCTAGC 1 cut(s) 3472
AvaI CYCGRG 1 cut(s) 1283
AvaII GGWCC 5 cut(s) 566, 1031, 1232, 3343, 3502
AxyI CCTNAGG 3 cut(s) 1637, 2472, 2492
BaeGI GKGCMC 3 cut(s) 1430, 2637, 3029
BaeI ACNNNNGTAYC 2 cut(s) 942, 975
BamHI GGATCC 1 cut(s) 1827
BanI GGYRCC 1 cut(s) 2634
BanII GRGCYC 2 cut(s) 421, 3705
BarI GAAGNNNNNNTAC 4 cut(s) 1743, 1775, 3812, 3844
BauI CACGAG 1 cut(s) 2229
BbrPI CACGTG 1 cut(s) 1824
BbsI GAAGAC 2 cut(s) 344, 424
Bbv12I GWGCWC 6 cut(s) 421, 1722, 2490, 3029, 3323, 3705
BccI CCATC 7 cut(s) 224, 932, 2414, 2794, 3179, 3835, 3957
BceAI ACGGC 1 cut(s) 3836
BcgI CGANNNNNNTGC 2 cut(s) 1722, 1756
BciT130I CCWGG 4 cut(s) 239, 2520, 2850, 3333
BciVI GTATCC 2 cut(s) 2279, 2666
BcoDI GTCTC 7 cut(s) 151, 1166, 1541, 2170, 2232, 2867, 4040
BcuI ACTAGT 3 cut(s) 197, 2836, 2905
BfaI CTAG 9 cut(s) 198, 800, 2582, 2837, 2906, 2954, 3473, 3942, 4106
BfmI CTRYAG 6 cut(s) 152, 426, 1157, 2754, 4059, 4116
BfoI RGCGCY 1 cut(s) 2271
BfrI CTTAAG 1 cut(s) 920
BfuAI ACCTGC 2 cut(s) 1042, 2761
BfuI GTATCC 2 cut(s) 2279, 2666
BglI GCCNNNNNGGC 1 cut(s) 3121
BglII AGATCT 1 cut(s) 3532
BlpI GCTNAGC 1 cut(s) 3369
BmcAI AGTACT 2 cut(s) 3149, 4143
Bme1390I CCNGG 4 cut(s) 239, 2520, 2850, 3333
Bme18I GGWCC 5 cut(s) 566, 1031, 1232, 3343, 3502
BmeRI GACNNNNNGTC 1 cut(s) 1470
BmeT110I CYCGRG 1 cut(s) 1283
BmgT120I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3113, 3343, 3502
BmiI GGNNCC 6 cut(s) 567, 1234, 1829, 2636, 3503, 3511
BmrFI CCNGG 4 cut(s) 239, 2520, 2850, 3333
BmrI ACTGGG 1 cut(s) 2607
BmsI GCATC 8 cut(s) 241, 758, 786, 817, 887, 1638, 1960, 2947
BmtI GCTAGC 1 cut(s) 3476
BmuI ACTGGG 1 cut(s) 2607
BpiI GAAGAC 2 cut(s) 344, 424
BplI GAGNNNNNCTC 2 cut(s) 3310, 3342
BpmI CTGGAG 5 cut(s) 260, 630, 1008, 2292, 3315
Bpu10I CCTNAGC 1 cut(s) 1038
Bpu1102I GCTNAGC 1 cut(s) 3369
Bpu14I TTCGAA 2 cut(s) 1260, 3338
BpuEI CTTGAG 5 cut(s) 189, 614, 1525, 1817, 4064
Bsa29I ATCGAT 4 cut(s) 333, 1742, 2763, 3252
BsaAI YACGTR 2 cut(s) 1824, 3109
BsaBI GATNNNNATC 1 cut(s) 624
BsaHI GRCGYC 1 cut(s) 3124
BsaI GGTCTC 1 cut(s) 2867
BsaWI WCCGGW 2 cut(s) 1013, 3008
BsaXI ACNNNNNCTCC 8 cut(s) 3313, 3343, 3494, 3524, 3837, 3867, 4044, 4074
Bsc4I CCNNNNNNNGG 8 cut(s) 578, 778, 960, 1910, 2948, 3332, 3402, 4048
Bse118I RCCGGY 1 cut(s) 1013
Bse1I ACTGG 8 cut(s) 1072, 1527, 1763, 2114, 2602, 3222, 3888, 3983
Bse21I CCTNAGG 3 cut(s) 1637, 2472, 2492
Bse3DI GCAATG 2 cut(s) 1980, 2892
Bse8I GATNNNNATC 1 cut(s) 624
BseBI CCWGG 4 cut(s) 239, 2520, 2850, 3333
BseCI ATCGAT 4 cut(s) 333, 1742, 2763, 3252
BseGI GGATG 8 cut(s) 588, 943, 2581, 2691, 2824, 2941, 3190, 3213
BseJI GATNNNNATC 1 cut(s) 624
BseLI CCNNNNNNNGG 8 cut(s) 578, 778, 960, 1910, 2948, 3332, 3402, 4048
BseMI GCAATG 2 cut(s) 1980, 2892
BseMII CTCAG 9 cut(s) 698, 1161, 2463, 2506, 2748, 2862, 3270, 3308, 3383
BseNI ACTGG 8 cut(s) 1072, 1527, 1763, 2114, 2602, 3222, 3888, 3983
BseRI GAGGAG 4 cut(s) 1928, 2480, 3318, 4090
BseSI GKGCMC 3 cut(s) 1430, 2637, 3029
BseYI CCCAGC 1 cut(s) 1477
BsgI GTGCAG 1 cut(s) 966
Bsh1236I CGCG 2 cut(s) 779, 2499
Bsh1285I CGRYCG 1 cut(s) 2976
BshFI GGCC 6 cut(s) 210, 1301, 2518, 3115, 3395, 3851
BshNI GGYRCC 1 cut(s) 2634
BshTI ACCGGT 1 cut(s) 1013
BshVI ATCGAT 4 cut(s) 333, 1742, 2763, 3252
BsiEI CGRYCG 1 cut(s) 2976
BsiHKAI GWGCWC 6 cut(s) 421, 1722, 2490, 3029, 3323, 3705
BsiHKCI CYCGRG 1 cut(s) 1283
BsiSI CCGG 3 cut(s) 1014, 3009, 3921
BslFI GGGAC 5 cut(s) 1150, 1218, 1266, 3502, 3515
BslI CCNNNNNNNGG 8 cut(s) 578, 778, 960, 1910, 2948, 3332, 3402, 4048
BsmAI GTCTC 7 cut(s) 151, 1166, 1541, 2170, 2232, 2867, 4040
BsmBI CGTCTC 1 cut(s) 4040
BsmFI GGGAC 5 cut(s) 1150, 1218, 1266, 3502, 3515
BsmI GAATGC 2 cut(s) 1403, 2143
BsnI GGCC 6 cut(s) 210, 1301, 2518, 3115, 3395, 3851
Bso31I GGTCTC 1 cut(s) 2867
BsoBI CYCGRG 1 cut(s) 1283
Bsp119I TTCGAA 2 cut(s) 1260, 3338
Bsp1286I GDGCHC 8 cut(s) 421, 1430, 1722, 2490, 2637, 3029, 3323, 3705
Bsp1407I TGTACA 1 cut(s) 3267
Bsp1720I GCTNAGC 1 cut(s) 3369
Bsp19I CCATGG 2 cut(s) 1266, 1802
BspACI CCGC 3 cut(s) 54, 83, 779
BspANI GGCC 6 cut(s) 210, 1301, 2518, 3115, 3395, 3851
BspCNI CTCAG 9 cut(s) 697, 1162, 2464, 2505, 2747, 2863, 3271, 3309, 3382
BspDI ATCGAT 4 cut(s) 333, 1742, 2763, 3252
BspFNI CGCG 2 cut(s) 779, 2499
BspHI TCATGA 2 cut(s) 298, 661
BspLI GGNNCC 6 cut(s) 567, 1234, 1829, 2636, 3503, 3511
BspMAI CTGCAG 4 cut(s) 156, 1161, 2758, 4120
BspMI ACCTGC 2 cut(s) 1042, 2761
BspOI GCTAGC 1 cut(s) 3476
BspPI GGATC 9 cut(s) 303, 539, 633, 972, 1822, 1831, 1835, 1895, 3257
BspT104I TTCGAA 2 cut(s) 1260, 3338
BspT107I GGYRCC 1 cut(s) 2634
BspTI CTTAAG 1 cut(s) 920
BspTNI GGTCTC 1 cut(s) 2867
BsrDI GCAATG 2 cut(s) 1980, 2892
BsrFI RCCGGY 1 cut(s) 1013
BsrGI TGTACA 1 cut(s) 3267
BsrI ACTGG 8 cut(s) 1072, 1527, 1763, 2114, 2602, 3222, 3888, 3983
BssAI RCCGGY 1 cut(s) 1013
BssNAI GTATAC 1 cut(s) 1710
BssNI GRCGYC 1 cut(s) 3124
BssSI CACGAG 1 cut(s) 2229
Bst1107I GTATAC 1 cut(s) 1710
Bst2BI CACGAG 1 cut(s) 2229
Bst2UI CCWGG 4 cut(s) 239, 2520, 2850, 3333
Bst6I CTCTTC 5 cut(s) 285, 798, 811, 1556, 3542
BstACI GRCGYC 1 cut(s) 3124
BstAFI CTTAAG 1 cut(s) 920
BstAUI TGTACA 1 cut(s) 3267
BstBAI YACGTR 2 cut(s) 1824, 3109
BstBI TTCGAA 2 cut(s) 1260, 3338
BstC8I GCNNGC 4 cut(s) 1164, 2557, 2832, 3474
BstDSI CCRYGG 3 cut(s) 1266, 1802, 3000
BstENI CCTNNNNNAGG 1 cut(s) 3330
BstF5I GGATG 8 cut(s) 588, 943, 2581, 2691, 2824, 2941, 3190, 3213
BstFNI CGCG 2 cut(s) 779, 2499
BstH2I RGCGCY 1 cut(s) 2271
BstHHI GCGC 3 cut(s) 779, 2270, 2499
BstMAI GTCTC 7 cut(s) 151, 1166, 1541, 2170, 2232, 2867, 4040
BstMCI CGRYCG 1 cut(s) 2976
BstMWI GCNNNNNNNGC 6 cut(s) 761, 1783, 2030, 2494, 2966, 3121
BstNI CCWGG 4 cut(s) 239, 2520, 2850, 3333
BstNSI RCATGY 6 cut(s) 670, 2040, 2249, 2293, 2443, 2708
BstSCI CCNGG 4 cut(s) 237, 2518, 2848, 3331
BstSFI CTRYAG 6 cut(s) 152, 426, 1157, 2754, 4059, 4116
BstSLI GKGCMC 3 cut(s) 1430, 2637, 3029
BstSNI TACGTA 1 cut(s) 3109
BstUI CGCG 2 cut(s) 779, 2499
BstV2I GAAGAC 2 cut(s) 344, 424
BstX2I RGATCY 4 cut(s) 625, 1827, 1836, 3532
BstXI CCANNNNNNTGG 2 cut(s) 3204, 3990
BstYI RGATCY 4 cut(s) 625, 1827, 1836, 3532
BstZ17I GTATAC 1 cut(s) 1710
Bsu15I ATCGAT 4 cut(s) 333, 1742, 2763, 3252
Bsu36I CCTNAGG 3 cut(s) 1637, 2472, 2492
BsuI GTATCC 2 cut(s) 2279, 2666
BsuRI GGCC 6 cut(s) 210, 1301, 2518, 3115, 3395, 3851
BsuTUI ATCGAT 4 cut(s) 333, 1742, 2763, 3252
BtgI CCRYGG 3 cut(s) 1266, 1802, 3000
BtsCI GGATG 8 cut(s) 588, 943, 2581, 2691, 2824, 2941, 3190, 3213
BtsI GCAGTG 4 cut(s) 554, 1151, 1734, 3441
BtsIMutI CAGTG 8 cut(s) 532, 554, 1151, 1668, 1734, 3441, 3895, 3990
BveI ACCTGC 2 cut(s) 1042, 2761
Cac8I GCNNGC 4 cut(s) 1164, 2557, 2832, 3474
CaiI CAGNNNCTG 1 cut(s) 1169
CciI TCATGA 2 cut(s) 298, 661
CfoI GCGC 3 cut(s) 779, 2270, 2499
Cfr10I RCCGGY 1 cut(s) 1013
Cfr13I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3113, 3343, 3502
ClaI ATCGAT 4 cut(s) 333, 1742, 2763, 3252
CseI GACGC 1 cut(s) 3113
CspAI ACCGGT 1 cut(s) 1013
DraI TTTAAA 1 cut(s) 384
DriI GACNNNNNGTC 1 cut(s) 1470
EaeI YGGCCR 2 cut(s) 1299, 3849
Eam1104I CTCTTC 5 cut(s) 285, 798, 811, 1556, 3542
Eam1105I GACNNNNNGTC 1 cut(s) 1470
EarI CTCTTC 5 cut(s) 285, 798, 811, 1556, 3542
Ecl136II GAGCTC 2 cut(s) 419, 3703
Eco105I TACGTA 1 cut(s) 3109
Eco24I GRGCYC 2 cut(s) 421, 3705
Eco31I GGTCTC 1 cut(s) 2867
Eco32I GATATC 3 cut(s) 859, 1740, 2115
Eco47I GGWCC 5 cut(s) 566, 1031, 1232, 3343, 3502
Eco53kI GAGCTC 2 cut(s) 419, 3703
Eco57I CTGAAG 5 cut(s) 84, 1230, 1258, 2243, 3104
Eco72I CACGTG 1 cut(s) 1824
Eco81I CCTNAGG 3 cut(s) 1637, 2472, 2492
Eco88I CYCGRG 1 cut(s) 1283
EcoICRI GAGCTC 2 cut(s) 419, 3703
EcoNI CCTNNNNNAGG 1 cut(s) 3330
EcoO109I RGGNCCY 5 cut(s) 209, 566, 1232, 3343, 3502
EcoRI GAATTC 2 cut(s) 1391, 3589
EcoRII CCWGG 4 cut(s) 237, 2518, 2848, 3331
EcoRV GATATC 3 cut(s) 859, 1740, 2115
EcoT22I ATGCAT 5 cut(s) 1953, 1969, 2042, 2251, 3392
EcoT38I GRGCYC 2 cut(s) 421, 3705
Esp3I CGTCTC 1 cut(s) 4040
FalI AAGNNNNNCTT 6 cut(s) 488, 520, 634, 666, 1775, 1807
FaqI GGGAC 5 cut(s) 1150, 1218, 1266, 3502, 3515
FauI CCCGC 1 cut(s) 772
FauNDI CATATG 2 cut(s) 1501, 1810
FblI GTMKAC 1 cut(s) 1709
FokI GGATG 8 cut(s) 595, 950, 2588, 2678, 2831, 2948, 3197, 3220
FriOI GRGCYC 2 cut(s) 421, 3705
FspBI CTAG 9 cut(s) 198, 800, 2582, 2837, 2906, 2954, 3473, 3942, 4106
GlaI GCGC 3 cut(s) 778, 2269, 2498
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 5 cut(s) 260, 630, 1008, 2292, 3315
HaeII RGCGCY 1 cut(s) 2271
HaeIII GGCC 6 cut(s) 210, 1301, 2518, 3115, 3395, 3851
HapII CCGG 3 cut(s) 1014, 3009, 3921
HgaI GACGC 1 cut(s) 3113
HhaI GCGC 3 cut(s) 779, 2270, 2499
Hin1I GRCGYC 1 cut(s) 3124
Hin6I GCGC 3 cut(s) 777, 2268, 2497
HinP1I GCGC 3 cut(s) 777, 2268, 2497
HincII GTYRAC 2 cut(s) 226, 710
HindII GTYRAC 2 cut(s) 226, 710
HindIII AAGCTT 4 cut(s) 1530, 1589, 1757, 1999
HpaII CCGG 3 cut(s) 1014, 3009, 3921
HphI GGTGA 8 cut(s) 227, 1028, 1466, 1537, 1837, 2109, 2401, 3817
Hpy99I CGWCG 1 cut(s) 35
HpyAV CCTTC 9 cut(s) 485, 862, 1205, 1908, 1943, 2422, 3334, 3838, 3875
HpyCH4IV ACGT 5 cut(s) 30, 1823, 2945, 3108, 3870
HpyF10VI GCNNNNNNNGC 6 cut(s) 761, 1783, 2030, 2494, 2966, 3121
HpySE526I ACGT 5 cut(s) 30, 1823, 2945, 3108, 3870
Hsp92I GRCGYC 1 cut(s) 3124
HspAI GCGC 3 cut(s) 777, 2268, 2497
LmnI GCTCC 8 cut(s) 241, 1339, 2273, 2493, 3515, 3708, 3993, 4077
LweI GCATC 8 cut(s) 241, 758, 786, 817, 887, 1638, 1960, 2947
MaeI CTAG 9 cut(s) 198, 800, 2582, 2837, 2906, 2954, 3473, 3942, 4106
MaeII ACGT 5 cut(s) 30, 1823, 2945, 3108, 3870
MfeI CAATTG 1 cut(s) 360
MflI RGATCY 4 cut(s) 625, 1827, 1836, 3532
MhlI GDGCHC 8 cut(s) 421, 1430, 1722, 2490, 2637, 3029, 3323, 3705
MlyI GAGTC 2 cut(s) 1480, 2729
MmeI TCCRAC 7 cut(s) 85, 1009, 1891, 2153, 2796, 3192, 4111
Mph1103I ATGCAT 5 cut(s) 1953, 1969, 2042, 2251, 3392
MroXI GAANNNNTTC 2 cut(s) 1245, 3661
MslI CAYNNNNRTG 3 cut(s) 2045, 2244, 3467
MspA1I CMGCKG 5 cut(s) 15, 395, 1481, 2969, 4121
MspCI CTTAAG 1 cut(s) 920
MspI CCGG 3 cut(s) 1014, 3009, 3921
MspR9I CCNGG 4 cut(s) 239, 2520, 2850, 3333
MunI CAATTG 1 cut(s) 360
Mva1269I GAATGC 2 cut(s) 1403, 2143
MvaI CCWGG 4 cut(s) 239, 2520, 2850, 3333
MvnI CGCG 2 cut(s) 779, 2499
MwoI GCNNNNNNNGC 6 cut(s) 761, 1783, 2030, 2494, 2966, 3121
NcoI CCATGG 2 cut(s) 1266, 1802
NdeI CATATG 2 cut(s) 1501, 1810
NheI GCTAGC 1 cut(s) 3472
NlaIV GGNNCC 6 cut(s) 567, 1234, 1829, 2636, 3503, 3511
NmuCI GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3217
NsiI ATGCAT 5 cut(s) 1953, 1969, 2042, 2251, 3392
NspI RCATGY 6 cut(s) 670, 2040, 2249, 2293, 2443, 2708
NspV TTCGAA 2 cut(s) 1260, 3338
PacI TTAATTAA 1 cut(s) 3144
PagI TCATGA 2 cut(s) 298, 661
PciI ACATGT 1 cut(s) 2704
PctI GAATGC 2 cut(s) 1403, 2143
PdmI GAANNNNTTC 2 cut(s) 1245, 3661
PflMI CCANNNNNTGG 2 cut(s) 578, 1910
PinAI ACCGGT 1 cut(s) 1013
Ple19I CGATCG 1 cut(s) 2976
PleI GAGTC 2 cut(s) 1479, 2728
PmaCI CACGTG 1 cut(s) 1824
PmlI CACGTG 1 cut(s) 1824
PpsI GAGTC 2 cut(s) 1479, 2728
Ppu21I YACGTR 2 cut(s) 1824, 3109
PpuMI RGGWCCY 4 cut(s) 566, 1232, 3343, 3502
PscI ACATGT 1 cut(s) 2704
PshBI ATTAAT 1 cut(s) 1668
Psp124BI GAGCTC 2 cut(s) 421, 3705
Psp5II RGGWCCY 4 cut(s) 566, 1232, 3343, 3502
Psp6I CCWGG 4 cut(s) 237, 2518, 2848, 3331
PspCI CACGTG 1 cut(s) 1824
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 4 cut(s) 237, 2518, 2848, 3331
PspN4I GGNNCC 6 cut(s) 567, 1234, 1829, 2636, 3503, 3511
PspPI GGNCC 7 cut(s) 209, 566, 1031, 1232, 3113, 3343, 3502
PspPPI RGGWCCY 4 cut(s) 566, 1232, 3343, 3502
PstI CTGCAG 4 cut(s) 156, 1161, 2758, 4120
PstNI CAGNNNCTG 1 cut(s) 1169
PsuI RGATCY 4 cut(s) 625, 1827, 1836, 3532
PvuI CGATCG 1 cut(s) 2976
PvuII CAGCTG 5 cut(s) 15, 395, 1481, 2969, 4121
RseI CAYNNNNRTG 3 cut(s) 2045, 2244, 3467
SacI GAGCTC 2 cut(s) 421, 3705
Sau96I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3113, 3343, 3502
ScaI AGTACT 2 cut(s) 3149, 4143
SchI GAGTC 2 cut(s) 1480, 2729
ScrFI CCNGG 4 cut(s) 239, 2520, 2850, 3333
SduI GDGCHC 8 cut(s) 421, 1430, 1722, 2490, 2637, 3029, 3323, 3705
SfaNI GCATC 8 cut(s) 241, 758, 786, 817, 887, 1638, 1960, 2947
SfcI CTRYAG 6 cut(s) 152, 426, 1157, 2754, 4059, 4116
SfuI TTCGAA 2 cut(s) 1260, 3338
SinI GGWCC 5 cut(s) 566, 1031, 1232, 3343, 3502
SmiI ATTTAAAT 1 cut(s) 384
SmiMI CAYNNNNRTG 3 cut(s) 2045, 2244, 3467
SmlI CTYRAG 6 cut(s) 204, 629, 920, 1540, 1832, 4043
SmoI CTYRAG 6 cut(s) 204, 629, 920, 1540, 1832, 4043
SnaBI TACGTA 1 cut(s) 3109
SpeI ACTAGT 3 cut(s) 197, 2836, 2905
SsiI CCGC 3 cut(s) 54, 83, 779
SspI AATATT 2 cut(s) 388, 1608
SspMI CTAG 9 cut(s) 198, 800, 2582, 2837, 2906, 2954, 3473, 3942, 4106
SstI GAGCTC 2 cut(s) 421, 3705
StyD4I CCNGG 4 cut(s) 237, 2518, 2848, 3331
SwaI ATTTAAAT 1 cut(s) 384
TaiI ACGT 5 cut(s) 33, 1826, 2948, 3111, 3873
TaqII GACCGA 1 cut(s) 23
TatI WGTACW 7 cut(s) 2354, 2578, 2730, 3147, 3267, 3819, 4141
TscAI CASTG 8 cut(s) 532, 561, 1158, 1668, 1734, 3448, 3895, 3990
TseFI GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3217
Tsp45I GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3217
TspRI CASTG 8 cut(s) 532, 561, 1158, 1668, 1734, 3448, 3895, 3990
Van91I CCANNNNNTGG 2 cut(s) 578, 1910
Vha464I CTTAAG 1 cut(s) 920
VneI GTGCAC 1 cut(s) 3025
VpaK11BI GGWCC 5 cut(s) 566, 1031, 1232, 3343, 3502
VspI ATTAAT 1 cut(s) 1668
XagI CCTNNNNNAGG 1 cut(s) 3330
XapI RAATTY 9 cut(s) 674, 1102, 1391, 1976, 2184, 3589, 3779, 4067, 4100
XbaI TCTAGA 1 cut(s) 2953
XceI RCATGY 6 cut(s) 670, 2040, 2249, 2293, 2443, 2708
XcmI CCANNNNNNNNNTGG 3 cut(s) 595, 2345, 2929
XmiI GTMKAC 1 cut(s) 1709
XmnI GAANNNNTTC 2 cut(s) 1245, 3661
XspI CTAG 9 cut(s) 198, 800, 2582, 2837, 2906, 2954, 3473, 3942, 4106
ZrmI AGTACT 2 cut(s) 3149, 4143
Zsp2I ATGCAT 5 cut(s) 1953, 1969, 2042, 2251, 3392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.