RchiOBHm_Chr2g0137121
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
54637693 .. 54647934
10242 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50790

Sequence Viewer

Length: 4269 bp
ATGGAGAGTGGTAATATCCAATTAGGCAGTTCCTCTATATGGAGGAACCATGGTAGTGTGGACGCTTTTTCGAGTTCTACACGCAGAGAAGACGATGAAGAAGCTCTCAAATGGGCTGCCCTAGAGAAGCTTCCCACTTATAATCGTCTGAGGAAAGGTATACTCACCTCGGCCAGTGGAAAAGCTAATGAAATTGATATACCAAATCTTGGTTTTGAAGAGAAAAAGGACTTGGTTGAGAGGTTGCTTAAAGGCACTGAAGACGGCAACGAAAAGTTTGTATTGAAGCTCAAGAATCGTATTGATAGAGTTGGAATTGATCTTCCCACAATTGAAGTTCGATTTGAGCATCTAAATATAGAAGCAGAAGCTTATGTAGGAAGCCGAGCTTTGCCTACTCTCGTAAACTGGATTGCTAACATAATCCAGGGATTCTTGACCAATCTCAGTATACTTTCAAGTAGCAAGACAAAAGTCTCTATCCTTAACAATGTTAATGGAATTATAAAGCCTAGCAGAATGACATTACTATTGGGTCCTCCAAGTTCCGGCAAGACCACACTGTTATTGGCTTTGGCTGGAAAGCTTGATCCAGATCTAAAGCTATCGGGAGCAGTGACTTATAATGGCCATGGAATGAATGATTTTGTACCCCAAAAAACTGCTGCATACATCAGTCAACATGATATGCATATTGGAGAAATGACTGTAAGGGAGACATTGGCCTTTTCTGCAAGATGCCAAGGGGTCGGAACTCGTTACGATATGCTAGCTGAGCTATCCAGAAGAGAGAAAGCAGCTAATATAAAGCCTGATCCTGACATTGATGTCTTCATGAAGGCAACAGCAACAGAAGGTCAGGAGGTTAACGTAGTGACAGATTACATTCTGAAGATTTTGGGACTGGAAGTGTGTGCTGATACAATGGTAGGGGATGAAATGTTAAGAGGTATCTCCGGAGGACAAAGGAAGCGTGTTACAACAGGTGAGATGCTTGTTGGACCGGCAAACGCTTTGTTCATGGACGAGATATCTACCGGTTTGGACAGCTCGACAACATTTCAAATTGTGAATTCAATCAAACAAAATATTCACACATTTGATGGAACGGCTGTCATCTCACTCCTCCAGCCAGCACCAGAGACTTATGAGCTTTTTGATGACATTATCCTCCTCTCAGATGGCCAGATTGTGTACCAGGGTCCTCGTGAGCATGTGCTTGAGTTTTTTGAAACTACGGGATTTAAATGTCCTGAGAGGAAAGGCATTGCTGACTTCCTACAAGAGGTGACATCAAGGAAAGATCAGGAGCAATATTGGGAAAGGAAAGAGGATCCCTACAGTTTCGTTACAGTTAAGAAATTTGTTGAGGCATTTGAGTCATTCCATGTGGGACAAAGACTTGGGGAGGAACTTTCAATTCCATTTGACAAAAGAAAGAGCCACCCGGCAGCTTTAACAACGAAAAAGTATGGTGCTAAAAAGGGAGAATTGTTGAAAGCTTGCATCTCAAGGCAACTTTTGCTGATCAAGAGGAATTCCTTTGTCTTTTACTTCAAGTTCACCCAAATTACAATTATGGCCTTGATTAGCATGACAATGTTTCTACGAACCAAGATGCACCACAGCTCAATAAATGATGCAGTAATTTATATGGGTGCTATGTTCTTCGCCAATGTCATAGTTATGTTTAATGGGATGTCAGAGATTTCAATGACCATTTTAAAGCTTCCTGTCTTTTATAAGCAAAGGGACTTTTTCTTCTTCCCTTCATGGGCATATGGTCTTCCAGCATGGATTCTCCAAATACCTATATCATTTGTAGAAGTAGCAGTTTGGGTGTTCATGACCTACTACGTGATCGGATATGATCCAAATGTTGGACGGTTTCTCAAGCAATATATCCTCTTCTTGTTTGTTAACCAGATGGCTTCCGGTTTATTTCGTACTATTGGAGCATTGTGTAGAGACTTGGTTGTTGCTAACACTTTAGGGTCATTTGCACTGCTCATACTTTTCACATTAAGTGGCTTTGTTCTCTCTAAAGATGATATTAACAAGGGGTGGATTTGGGGTTACTGGAGTTCACCTCTGATGTACAGTCAGAATGCAATCGTAGTTAATGAGTTACTTGGGAAGAGCTGGAGACATGTACTGCCAAACTCTACAATATCTGTAGGAGTTGCAGCTTTAGAGTACCGCGGGTTCTTTACACACGCGTATTGGTATTGGCTAGGAGTTGGGGCACTGATTGGATTCTCATTGCTATTCAACATTTTTTATGTTCTAGCTCTCTCCTACCTAAACCCACTTGGCAAAATTCAGGCTGTTAAATCAGAAGATTCTGGGAGGATTGCAGAGGAAAGTCGGTCAAGTCAACCAACCACGCCAGATAGTATGAATACAGAAGTTTCTGCGGAGGCTATTAACAGAGGGAAACGAGGAATGGTTCTTCCATTTGAACCACATTCCATAACCTTTGATGAAATCACATACTCAGTGGACATGCCACAGGAAATGAAGATGGAGGGTGTTGTAGAGGAAAAGTTAGTTCTTCTGAAGGCTGTGAGCGGTTCTTTCAGGCCAGGTGTTTTAACAGCTCTTATGGGTGTAAGTGGTGCTGGTAAAACGACTCTCATGGATGTACTGGCTGGTAGGAAAACTGGTGGATATATTGAAGGAGACATAAAAATTTCCGGGTACCCAAAGAAGCAAGAAACATTTGCTCGGATTTCTGGATATTGTGAGCAAAATGACATTCACTCCCCTCAAGTTACTGTCTACGAGTCAGTGCTCTACTCAGCATGGCTTCGTTTGCCACCTGAAGTAACATCTGAAACCAAAAAGGTGTTCATTGAGGAAGTGATGGAACTTGTGGAACTTAATCCATTGAGGCAAGCACTTGTTGGGTTGCCTGGTATCAATGGTCTTTCAACTGAGCAGCGCAAGAGGTTGACTATCGCAGTTGAGCTAGTGGCGAATCCCTCGGTAATATTCATGGATGAACCAACTTCGGGGTTAGATGCAAGAGCAGCTGCAATTGTCATGAGAACAGTTAGGAACACAGTGGATACTGGTAGAACAGTTGTGTGCACCATCCATCAGCCTAGCATTGACATTTTTGAATCTTTTGATGAGTTACTGCTACTGAAGCGGGGAGGACAAGAAATTTATGTTGGTCCATTAGGTCGCCATTCTTGCAATCTAATCAAATATTTTGAGGAGATTGAAGGAGTCTGTAAAATAAAAGATGGTTACAATCCAGCAACATGGATGTTGGATGTTTCCACTGCAGCACAAGAATTAGCTTTGGGGATTGATTTTGCTCATGTTTACAAAAACTCAGAACTATACAGGAGAAATAAGCAACTCATTACAGAATATAGCACGCCTTCCCCTTCTTCAAAGGAACTCTCTTTCCCTACTCGATACTCACAACCGTTTCTCATCCAATCTATGGCTTGCTTGTGGAAACAACATTGGTCATATTGGCGTAACCCATCGTACAATGCAGTAAGACTTCTCTTCACAATAGGCATAGCATTGGTGTTTGGGACAATGTTCTGGAATCTTGGCTCCAAAACGAATAGACAACAAGATCTGTTTAATGCAATGGGTTGTATGTTCACAGCTGTTATCTTTCTCGGGGTCCAAAATGCAACATCTGTGCAACCTATAGTTGCTATTGAAAGAACAGTCTTTTACAGAGAAAAAGCTGCAGGGATGTATTCAGCCTTGGCTTATGCATTTGCACAGGTTATGATTGAGCTACCGTATATTTTGGTACAAGCTGTGGTTTATGGAGTCATAACTTATCTAATGATCGGATTTGAGAGAACTTTTGTTAAAATCTTTTGGTACATATTCTTCATGTTCTTCACATTGGCGTACTTCACATTTTATGGCATGATGGCTGTGGCGGTTACTCCAAACCATCACATAGCTACTATTGTTTCCAGTGCATTTTATGCAATATGGATGCTCTTTTCTGGTTTTCTTATTCCTCGACCGAGGATTCCCATATGGTGGAGATGGTACTACTGGGCATGTCCAATAGCTTGGACATTGTATGGATTGATTACATCACAGTTTGGAGATGTTGATGATATGCTCGAAAATGGTGAAACAGTGAAACAGTTTTTGAGAGCTTATTTCGGTTTCAAACATGATTTTCTGGGAGTTATTGCAGTAGGGCTTGTTGGGTATGCAGTGCTCTTTGCATTCATCTTTGCCTTTTCTATAAGGGCATTTAACTTCCAAAAGCGCTAA

Protein Analysis

1422

Amino Acids

160.23

Weight (kDa)

7.3

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 90 - 136 3.3e-06 ABC-transporter N-terminal
ABC_tran PF00005 162 - 343 6.8e-16 ABC transporter
ABC2_membrane PF01061 498 - 710 3.7e-45 ABC-2 type transporter
PDR_assoc PF08370 715 - 777 4.1e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 853 - 1005 9.3e-21 ABC transporter
ABC2_membrane PF01061 1151 - 1364 5.8e-61 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 141, 506, 624, 1743
AasI GACNNNNNNGTC 1 cut(s) 827
Acc65I GGTACC 1 cut(s) 2700
AccB1I GGYRCC 1 cut(s) 2700
AccB7I CCANNNNNTGG 4 cut(s) 209, 1880, 3457, 4026
AccBSI CCGCTC 1 cut(s) 2571
AccI GTMKAC 3 cut(s) 160, 451, 2781
AccII CGCG 2 cut(s) 2202, 2219
AccIII TCCGGA 1 cut(s) 956
AciI CCGC 6 cut(s) 2200, 2202, 2417, 2571, 3154, 3920
AclWI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
AcoI YGGCCR 3 cut(s) 171, 628, 1183
AcsI RAATTY 6 cut(s) 1072, 1361, 1537, 2319, 2691, 3168
AcuI CTGAAG 5 cut(s) 279, 911, 2579, 2844, 3170
AfeI AGCGCT 1 cut(s) 4265
AfiI CCNNNNNNNGG 9 cut(s) 39, 209, 548, 1285, 1774, 1880, 3014, 3457, 4026
AflIII ACRYGT 2 cut(s) 2149, 2217
AgeI ACCGGT 1 cut(s) 1037
AjnI CCWGG 4 cut(s) 426, 1197, 2584, 2914
AjuI GAANNNNNNNTTGG 6 cut(s) 215, 247, 2834, 2866, 3159, 3191
AloI GAACNNNNNNTCC 2 cut(s) 3402, 3434
Alw21I GWGCWC 3 cut(s) 2796, 3095, 4215
Alw26I GTCTC 6 cut(s) 481, 710, 1136, 1962, 2140, 2676
Alw44I GTGCAC 1 cut(s) 3091
AlwI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
Ama87I CYCGRG 1 cut(s) 3644
Aor13HI TCCGGA 1 cut(s) 956
Aor51HI AGCGCT 1 cut(s) 4265
AoxI GGCC 6 cut(s) 171, 628, 723, 1183, 1581, 2582
ApaLI GTGCAC 1 cut(s) 3091
ApoI RAATTY 6 cut(s) 1072, 1361, 1537, 2319, 2691, 3168
AsiGI ACCGGT 1 cut(s) 1037
Asp718I GGTACC 1 cut(s) 2700
AspLEI GCGC 2 cut(s) 2946, 4266
AspS9I GGNCC 5 cut(s) 536, 1001, 1202, 3179, 3649
AsuC2I CCSGG 2 cut(s) 1448, 2698
AsuHPI GGTGA 6 cut(s) 157, 998, 1300, 1555, 2079, 4133
AsuNHI GCTAGC 1 cut(s) 769
AvaI CYCGRG 1 cut(s) 3644
AvaII GGWCC 5 cut(s) 536, 1001, 1202, 3179, 3649
BaeGI GKGCMC 2 cut(s) 2248, 3095
BaeI ACNNNNGTAYC 2 cut(s) 912, 945
BalI TGGCCA 2 cut(s) 630, 1185
BamHI GGATCC 1 cut(s) 1333
BanI GGYRCC 1 cut(s) 2700
BarI GAAGNNNNNNTAC 2 cut(s) 3851, 3883
BauI CACGAG 1 cut(s) 1206
BbsI GAAGAC 4 cut(s) 96, 267, 823, 1778
Bbv12I GWGCWC 3 cut(s) 2796, 3095, 4215
BceAI ACGGC 2 cut(s) 280, 1125
BciT130I CCWGG 4 cut(s) 428, 1199, 2586, 2916
BciVI GTATCC 1 cut(s) 3064
BclI TGATCA 1 cut(s) 1527
BcnI CCSGG 2 cut(s) 1448, 2698
BcoDI GTCTC 6 cut(s) 481, 710, 1136, 1962, 2140, 2676
BfaI CTAG 7 cut(s) 122, 513, 770, 2234, 2288, 2972, 3108
BfmI CTRYAG 5 cut(s) 1339, 2175, 3291, 3675, 3717
BfoI RGCGCY 1 cut(s) 4267
BfuI GTATCC 1 cut(s) 3064
BglII AGATCT 2 cut(s) 595, 3598
BlpI GCTNAGC 1 cut(s) 774
Bme1390I CCNGG 6 cut(s) 428, 1199, 1448, 2586, 2698, 2916
Bme18I GGWCC 5 cut(s) 536, 1001, 1202, 3179, 3649
BmeT110I CYCGRG 1 cut(s) 3644
BmgT120I GGNCC 5 cut(s) 536, 1001, 1202, 3179, 3649
BmiI GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2702, 3577, 3650
BmrFI CCNGG 6 cut(s) 428, 1199, 1448, 2586, 2698, 2916
BmrI ACTGGG 1 cut(s) 4051
BmsI GCATC 8 cut(s) 358, 728, 981, 1515, 1608, 1630, 3013, 3969
BmtI GCTAGC 1 cut(s) 773
BmuI ACTGGG 1 cut(s) 4051
BoxI GACNNNNGTC 1 cut(s) 473
BpiI GAAGAC 4 cut(s) 96, 267, 823, 1778
BplI GAGNNNNNCTC 2 cut(s) 2074, 2106
BpmI CTGGAG 3 cut(s) 1112, 2101, 2164
Bpu1102I GCTNAGC 1 cut(s) 774
BpuEI CTTGAG 5 cut(s) 275, 1241, 1495, 1877, 2754
BpuMI CCSGG 2 cut(s) 1448, 2698
BsaAI YACGTR 1 cut(s) 1858
BsaBI GATNNNNATC 1 cut(s) 594
BsaWI WCCGGW 3 cut(s) 956, 1037, 1934
BsaXI ACNNNNNCTCC 2 cut(s) 2747, 2777
Bsc4I CCNNNNNNNGG 9 cut(s) 39, 209, 548, 1285, 1774, 1880, 3014, 3457, 4026
Bse118I RCCGGY 2 cut(s) 1003, 1037
Bse1I ACTGG 9 cut(s) 174, 413, 909, 2084, 2652, 2668, 3079, 3957, 4046
Bse3DI GCAATG 3 cut(s) 1266, 2261, 3618
Bse8I GATNNNNATC 1 cut(s) 594
BseAI TCCGGA 1 cut(s) 956
BseBI CCWGG 4 cut(s) 428, 1199, 2586, 2916
BseJI GATNNNNATC 1 cut(s) 594
BseLI CCNNNNNNNGG 9 cut(s) 39, 209, 548, 1285, 1774, 1880, 3014, 3457, 4026
BseMI GCAATG 3 cut(s) 1266, 2261, 3618
BseMII CTCAG 9 cut(s) 140, 460, 765, 1191, 1245, 2511, 2814, 2928, 3357
BseNI ACTGG 9 cut(s) 174, 413, 909, 2084, 2652, 2668, 3079, 3957, 4046
BseRI GAGGAG 3 cut(s) 1115, 1163, 3236
BseSI GKGCMC 2 cut(s) 2248, 3095
Bsh1236I CGCG 2 cut(s) 2202, 2219
Bsh1285I CGRYCG 1 cut(s) 4010
BshFI GGCC 6 cut(s) 173, 630, 725, 1185, 1583, 2584
BshNI GGYRCC 1 cut(s) 2700
BshTI ACCGGT 1 cut(s) 1037
BsiEI CGRYCG 1 cut(s) 4010
BsiHKAI GWGCWC 3 cut(s) 2796, 3095, 4215
BsiHKCI CYCGRG 1 cut(s) 3644
BsiSI CCGG 7 cut(s) 549, 957, 1004, 1038, 1448, 1935, 2697
BslFI GGGAC 4 cut(s) 915, 1407, 1766, 3568
BslI CCNNNNNNNGG 9 cut(s) 39, 209, 548, 1285, 1774, 1880, 3014, 3457, 4026
BsmAI GTCTC 6 cut(s) 481, 710, 1136, 1962, 2140, 2676
BsmFI GGGAC 4 cut(s) 915, 1407, 1766, 3568
BsmI GAATGC 2 cut(s) 2113, 4220
BsnI GGCC 6 cut(s) 173, 630, 725, 1185, 1583, 2584
BsoBI CYCGRG 1 cut(s) 3644
Bsp1286I GDGCHC 4 cut(s) 2248, 2796, 3095, 4215
Bsp13I TCCGGA 1 cut(s) 956
Bsp1407I TGTACA 1 cut(s) 2097
Bsp1720I GCTNAGC 1 cut(s) 774
Bsp19I CCATGG 2 cut(s) 49, 631
BspACI CCGC 6 cut(s) 2200, 2202, 2417, 2571, 3154, 3920
BspANI GGCC 6 cut(s) 173, 630, 725, 1185, 1583, 2584
BspCNI CTCAG 9 cut(s) 141, 459, 766, 1190, 1246, 2510, 2813, 2929, 3356
BspEI TCCGGA 1 cut(s) 956
BspFNI CGCG 2 cut(s) 2202, 2219
BspHI TCATGA 3 cut(s) 834, 1845, 3045
BspLI GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2702, 3577, 3650
BspMAI CTGCAG 2 cut(s) 3295, 3721
BspOI GCTAGC 1 cut(s) 773
BspPI GGATC 5 cut(s) 584, 809, 1328, 1341, 1865
BspQI GCTCTTC 1 cut(s) 2132
BspT107I GGYRCC 1 cut(s) 2700
BsrBI CCGCTC 1 cut(s) 2571
BsrDI GCAATG 3 cut(s) 1266, 2261, 3618
BsrFI RCCGGY 2 cut(s) 1003, 1037
BsrGI TGTACA 1 cut(s) 2097
BsrI ACTGG 9 cut(s) 174, 413, 909, 2084, 2652, 2668, 3079, 3957, 4046
BssAI RCCGGY 2 cut(s) 1003, 1037
BssNAI GTATAC 2 cut(s) 161, 452
BssSI CACGAG 1 cut(s) 1206
BssT1I CCWWGG 4 cut(s) 49, 631, 742, 3735
Bst1107I GTATAC 2 cut(s) 161, 452
Bst2BI CACGAG 1 cut(s) 1206
Bst2UI CCWGG 4 cut(s) 428, 1199, 2586, 2916
Bst6I CTCTTC 5 cut(s) 213, 781, 1913, 2132, 3530
BstAPI GCANNNNNTGC 2 cut(s) 1522, 3968
BstAUI TGTACA 1 cut(s) 2097
BstBAI YACGTR 1 cut(s) 1858
BstC8I GCNNGC 6 cut(s) 771, 1134, 1504, 2898, 3389, 3463
BstDEI CTNAG 9 cut(s) 149, 446, 774, 1177, 1254, 2497, 2800, 2937, 3343
BstDSI CCRYGG 3 cut(s) 49, 631, 2200
BstENI CCTNNNNNAGG 1 cut(s) 1283
BstFNI CGCG 2 cut(s) 2202, 2219
BstH2I RGCGCY 1 cut(s) 4267
BstHHI GCGC 2 cut(s) 2946, 4266
BstMAI GTCTC 6 cut(s) 481, 710, 1136, 1962, 2140, 2676
BstMCI CGRYCG 1 cut(s) 4010
BstMWI GCNNNNNNNGC 8 cut(s) 731, 775, 1522, 2815, 3032, 3151, 3198, 3968
BstNI CCWGG 4 cut(s) 428, 1199, 2586, 2916
BstNSI RCATGY 4 cut(s) 1217, 2153, 2509, 4050
BstPAI GACNNNNGTC 1 cut(s) 473
BstSCI CCNGG 6 cut(s) 426, 1197, 1446, 2584, 2696, 2914
BstSFI CTRYAG 5 cut(s) 1339, 2175, 3291, 3675, 3717
BstSLI GKGCMC 2 cut(s) 2248, 3095
BstUI CGCG 2 cut(s) 2202, 2219
BstV2I GAAGAC 4 cut(s) 96, 267, 823, 1778
BstX2I RGATCY 3 cut(s) 595, 1333, 3598
BstXI CCANNNNNNTGG 2 cut(s) 3270, 4059
BstYI RGATCY 3 cut(s) 595, 1333, 3598
BstZ17I GTATAC 2 cut(s) 161, 452
BsuI GTATCC 1 cut(s) 3064
BsuRI GGCC 6 cut(s) 173, 630, 725, 1185, 1583, 2584
BtgI CCRYGG 3 cut(s) 49, 631, 2200
BtsI GCAGTG 4 cut(s) 621, 2003, 3288, 4215
Cac8I GCNNGC 6 cut(s) 771, 1134, 1504, 2898, 3389, 3463
CciI TCATGA 3 cut(s) 834, 1845, 3045
CfoI GCGC 2 cut(s) 2946, 4266
Cfr10I RCCGGY 2 cut(s) 1003, 1037
Cfr13I GGNCC 5 cut(s) 536, 1001, 1202, 3179, 3649
Cfr42I CCGCGG 1 cut(s) 2203
CseI GACGC 1 cut(s) 71
CspAI ACCGGT 1 cut(s) 1037
DdeI CTNAG 9 cut(s) 149, 446, 774, 1177, 1254, 2497, 2800, 2937, 3343
DraI TTTAAA 2 cut(s) 1246, 1725
DrdI GACNNNNNNGTC 1 cut(s) 827
DseDI GACNNNNNNGTC 1 cut(s) 827
EaeI YGGCCR 3 cut(s) 171, 628, 1183
Eam1104I CTCTTC 5 cut(s) 213, 781, 1913, 2132, 3530
EarI CTCTTC 5 cut(s) 213, 781, 1913, 2132, 3530
Eco130I CCWWGG 4 cut(s) 49, 631, 742, 3735
Eco32I GATATC 1 cut(s) 1032
Eco47I GGWCC 5 cut(s) 536, 1001, 1202, 3179, 3649
Eco47III AGCGCT 1 cut(s) 4265
Eco57I CTGAAG 5 cut(s) 279, 911, 2579, 2844, 3170
Eco88I CYCGRG 1 cut(s) 3644
EcoNI CCTNNNNNAGG 1 cut(s) 1283
EcoO109I RGGNCCY 2 cut(s) 536, 1202
EcoRI GAATTC 2 cut(s) 1072, 1537
EcoRII CCWGG 4 cut(s) 426, 1197, 2584, 2914
EcoRV GATATC 1 cut(s) 1032
EcoT14I CCWWGG 4 cut(s) 49, 631, 742, 3735
EcoT22I ATGCAT 2 cut(s) 693, 3748
ErhI CCWWGG 4 cut(s) 49, 631, 742, 3735
FalI AAGNNNNNCTT 2 cut(s) 373, 405
FaqI GGGAC 4 cut(s) 915, 1407, 1766, 3568
FauI CCCGC 2 cut(s) 2195, 3147
FauNDI CATATG 2 cut(s) 1780, 4022
FbaI TGATCA 1 cut(s) 1527
FblI GTMKAC 3 cut(s) 160, 451, 2781
FspBI CTAG 7 cut(s) 122, 513, 770, 2234, 2288, 2972, 3108
GlaI GCGC 2 cut(s) 2945, 4265
GsuI CTGGAG 3 cut(s) 1112, 2101, 2164
HaeII RGCGCY 1 cut(s) 4267
HaeIII GGCC 6 cut(s) 173, 630, 725, 1185, 1583, 2584
HapII CCGG 7 cut(s) 549, 957, 1004, 1038, 1448, 1935, 2697
HgaI GACGC 1 cut(s) 71
HhaI GCGC 2 cut(s) 2946, 4266
Hin6I GCGC 2 cut(s) 2944, 4264
HinP1I GCGC 2 cut(s) 2944, 4264
HincII GTYRAC 5 cut(s) 680, 868, 1921, 2378, 2955
HindII GTYRAC 5 cut(s) 680, 868, 1921, 2378, 2955
HindIII AAGCTT 5 cut(s) 128, 369, 584, 1500, 1727
HpaI GTTAAC 2 cut(s) 868, 1921
HpaII CCGG 7 cut(s) 549, 957, 1004, 1038, 1448, 1935, 2697
HphI GGTGA 6 cut(s) 157, 998, 1300, 1555, 2079, 4133
HpyAV CCTTC 8 cut(s) 832, 848, 1779, 2554, 2672, 3224, 3402, 3408
HpyCH4IV ACGT 2 cut(s) 870, 1857
HpyF10VI GCNNNNNNNGC 8 cut(s) 731, 775, 1522, 2815, 3032, 3151, 3198, 3968
HpyF3I CTNAG 9 cut(s) 149, 446, 774, 1177, 1254, 2497, 2800, 2937, 3343
HpySE526I ACGT 2 cut(s) 870, 1857
HspAI GCGC 2 cut(s) 2944, 4264
Kpn2I TCCGGA 1 cut(s) 956
KpnI GGTACC 1 cut(s) 2704
Ksp22I TGATCA 1 cut(s) 1527
KspAI GTTAAC 2 cut(s) 868, 1921
KspI CCGCGG 1 cut(s) 2203
LguI GCTCTTC 1 cut(s) 2132
LmnI GCTCC 4 cut(s) 611, 1309, 1955, 3581
LweI GCATC 8 cut(s) 358, 728, 981, 1515, 1608, 1630, 3013, 3969
MaeI CTAG 7 cut(s) 122, 513, 770, 2234, 2288, 2972, 3108
MaeII ACGT 2 cut(s) 870, 1857
MbiI CCGCTC 1 cut(s) 2571
MfeI CAATTG 2 cut(s) 330, 3039
MflI RGATCY 3 cut(s) 595, 1333, 3598
MhlI GDGCHC 4 cut(s) 2248, 2796, 3095, 4215
MlsI TGGCCA 2 cut(s) 630, 1185
MluI ACGCGT 1 cut(s) 2217
MluNI TGGCCA 2 cut(s) 630, 1185
MlyI GAGTC 5 cut(s) 1388, 2626, 2795, 3243, 3813
MmeI TCCRAC 5 cut(s) 292, 730, 979, 1861, 3258
Mox20I TGGCCA 2 cut(s) 630, 1185
Mph1103I ATGCAT 2 cut(s) 693, 3748
MroI TCCGGA 1 cut(s) 956
MscI TGGCCA 2 cut(s) 630, 1185
MslI CAYNNNNRTG 3 cut(s) 54, 1598, 1685
Msp20I TGGCCA 2 cut(s) 630, 1185
MspA1I CMGCKG 3 cut(s) 2202, 3035, 3632
MspI CCGG 7 cut(s) 549, 957, 1004, 1038, 1448, 1935, 2697
MspR9I CCNGG 6 cut(s) 428, 1199, 1448, 2586, 2698, 2916
MunI CAATTG 2 cut(s) 330, 3039
Mva1269I GAATGC 2 cut(s) 2113, 4220
MvaI CCWGG 4 cut(s) 428, 1199, 2586, 2916
MvnI CGCG 2 cut(s) 2202, 2219
MwoI GCNNNNNNNGC 8 cut(s) 731, 775, 1522, 2815, 3032, 3151, 3198, 3968
NciI CCSGG 2 cut(s) 1448, 2698
NcoI CCATGG 2 cut(s) 49, 631
NdeI CATATG 2 cut(s) 1780, 4022
NheI GCTAGC 1 cut(s) 769
NlaIV GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2702, 3577, 3650
NmeAIII GCCGAG 2 cut(s) 149, 410
NmuCI GTSAC 3 cut(s) 616, 874, 1288
NsiI ATGCAT 2 cut(s) 693, 3748
NspI RCATGY 4 cut(s) 1217, 2153, 2509, 4050
PagI TCATGA 3 cut(s) 834, 1845, 3045
PciI ACATGT 1 cut(s) 2149
PciSI GCTCTTC 1 cut(s) 2132
PctI GAATGC 2 cut(s) 2113, 4220
PfeI GAWTC 9 cut(s) 295, 432, 1798, 2256, 2342, 2980, 3125, 3568, 4015
PflMI CCANNNNNTGG 4 cut(s) 209, 1880, 3457, 4026
PinAI ACCGGT 1 cut(s) 1037
PleI GAGTC 5 cut(s) 1387, 2626, 2794, 3242, 3812
PpsI GAGTC 5 cut(s) 1387, 2626, 2794, 3242, 3812
Ppu21I YACGTR 1 cut(s) 1858
PpuMI RGGWCCY 2 cut(s) 536, 1202
PscI ACATGT 1 cut(s) 2149
PshAI GACNNNNGTC 1 cut(s) 473
PsiI TTATAA 4 cut(s) 141, 506, 624, 1743
Psp5II RGGWCCY 2 cut(s) 536, 1202
Psp6I CCWGG 4 cut(s) 426, 1197, 2584, 2914
PspGI CCWGG 4 cut(s) 426, 1197, 2584, 2914
PspN4I GGNNCC 7 cut(s) 47, 537, 1203, 1335, 2702, 3577, 3650
PspPI GGNCC 5 cut(s) 536, 1001, 1202, 3179, 3649
PspPPI RGGWCCY 2 cut(s) 536, 1202
PsrI GAACNNNNNNTAC 2 cut(s) 2189, 2221
PstI CTGCAG 2 cut(s) 3295, 3721
PsuI RGATCY 3 cut(s) 595, 1333, 3598
PvuII CAGCTG 2 cut(s) 3035, 3632
RseI CAYNNNNRTG 3 cut(s) 54, 1598, 1685
SacII CCGCGG 1 cut(s) 2203
SapI GCTCTTC 1 cut(s) 2132
Sau96I GGNCC 5 cut(s) 536, 1001, 1202, 3179, 3649
SchI GAGTC 5 cut(s) 1388, 2626, 2795, 3243, 3813
ScrFI CCNGG 6 cut(s) 428, 1199, 1448, 2586, 2698, 2916
SduI GDGCHC 4 cut(s) 2248, 2796, 3095, 4215
SfaNI GCATC 8 cut(s) 358, 728, 981, 1515, 1608, 1630, 3013, 3969
SfcI CTRYAG 5 cut(s) 1339, 2175, 3291, 3675, 3717
Sfr303I CCGCGG 1 cut(s) 2203
SgrBI CCGCGG 1 cut(s) 2203
SinI GGWCC 5 cut(s) 536, 1001, 1202, 3179, 3649
SmiI ATTTAAAT 1 cut(s) 1246
SmiMI CAYNNNNRTG 3 cut(s) 54, 1598, 1685
SmlI CTYRAG 5 cut(s) 290, 1220, 1510, 1892, 2769
SmoI CTYRAG 5 cut(s) 290, 1220, 1510, 1892, 2769
SsiI CCGC 6 cut(s) 2200, 2202, 2417, 2571, 3154, 3920
SspI AATATT 4 cut(s) 1090, 1316, 2994, 3215
SspMI CTAG 7 cut(s) 122, 513, 770, 2234, 2288, 2972, 3108
StyD4I CCNGG 6 cut(s) 426, 1197, 1446, 2584, 2696, 2914
StyI CCWWGG 4 cut(s) 49, 631, 742, 3735
SwaI ATTTAAAT 1 cut(s) 1246
TaiI ACGT 2 cut(s) 873, 1860
TaqI TCGA 6 cut(s) 71, 340, 1052, 3427, 4006, 4113
TaqII GACCGA 2 cut(s) 2358, 4024
TatI WGTACW 3 cut(s) 2097, 2152, 2644
TfiI GAWTC 9 cut(s) 295, 432, 1798, 2256, 2342, 2980, 3125, 3568, 4015
TseFI GTSAC 3 cut(s) 616, 874, 1288
Tsp45I GTSAC 3 cut(s) 616, 874, 1288
Van91I CCANNNNNTGG 4 cut(s) 209, 1880, 3457, 4026
VneI GTGCAC 1 cut(s) 3091
VpaK11BI GGWCC 5 cut(s) 536, 1001, 1202, 3179, 3649
XagI CCTNNNNNAGG 1 cut(s) 1283
XapI RAATTY 6 cut(s) 1072, 1361, 1537, 2319, 2691, 3168
XceI RCATGY 4 cut(s) 1217, 2153, 2509, 4050
XcmI CCANNNNNNNNNTGG 1 cut(s) 565
XmiI GTMKAC 3 cut(s) 160, 451, 2781
XspI CTAG 7 cut(s) 122, 513, 770, 2234, 2288, 2972, 3108
Zsp2I ATGCAT 2 cut(s) 693, 3748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.