Rw6G025070
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
48266360 .. 48273066
6707 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G025070.1

Sequence Viewer

Length: 4218 bp
ATGGAGATCATCAGCTGTGACCTTGAAAAAGCCGGTCACAGTTTCCATCGAAGCGGTTCGTTTTGGACTGACAATGGCAGGGCGGTTTTCTCAACATCTTCAGTTGGAGAGGAAAACGAGGACGATGAGGAAGCTCTCAAATGGGAAGCTCTGCAGAGACTTCCTACTTTCACTCGTTTGAAAAAGGGGTTGCTCACTAGTCCTCAAGGCCCTGCCATCGAAGTTGACTTGCATCACCTGGAGCTGCAAGAAAGGAAAGGCTTGATTGAGAGGCTTCTGGGAGTAGTCGAAGAGGATCATGAGAACTTCTTGTTGAGGTTCAAGAATCGAATCGATAGAGTTGGGATTAGTCTTCCTACAATTGAAGTCAGATTCGAGCATTTAAATATTGCAGCTGAATCTTATATAGGAGGCAGAGCTCTGCCTACAGTCTTCAATTACTGTGTTAATTTAGTGGAGGGTTTCTTGAATTACCTTCATATTGTTCCTGTTAAGAAGCAACCCTTGTCTATACTTAAAGATGTCAGTGGGATCATCACGCCTTGCAGAATGACACTGCTCTTGGGTCCTCCAAGTTCTGGGAAGACCACGCTCTTGTTGGCTTTGGCTGGAGAGCTTGATAAGGATCTCAAGGTTTCAGGAAGTGTGACTTACAATGGTCATGACATGCACGAATTTGTACCTCAGAGAAGTGCTGCATATATCAGTCAACATGATGTTCATATCGGAGAAATGACAGTTGCAGAAACCTTGGCTTTTTCGGCAAGATGCCAAGGCGCGGGAACTCGTTATGAGATGCTAGAAGAGTTAAGTAGAAGAGAGAAAGATGCAAGAATTAAGCCAGATATAGACTTGGATATCTACATGAAGGGAATAGCATCAGAAAGCCAAAGGGCAGTATTTGTGACAAGTTATATTCTTAAGATTTTGGGATTGGATGGCTGTGCAGATACCTTGGTAGGGGATCAAATGATAAGGGGTATATCTGGAGGACAAAAGAAGCGTGTCACAACTGGTGAGATGTTGGTTGGACCTGCTAAGGCACTATTCATGGACGAAATATCGACTGGTTTGGATAGTTCAACAACTTATCAAATAGTAAATTCAATCAAGCAATCTGTTCACATTCTCCAAGGGACTGCTTTCATCTCACTGCTGCAGCCAGCACCTGAGACTTATGATCTATTTGATGACATTATTCTTCTTTCTGAAGGTCAAATTGTGTACCAAGGTCCCCGTGAATATGTTCTTGACTTTTTTGAATCCATGGGCTTCAGATGTCCCGAGAGAAAAGGTGTGGCCGATTTTCTGCAAGAAGTGACATCAAAGAAAGATCAGGAGCAGTATTGGGGAAGCAGAGATGAGCCTTACAGGTTCATCACAGTCCAAGAATTCTCGGAGGCATTCCAATCTTTTCATGTAGGGGGCACAATTACTAATGAACTTGCAACTCCATTTGACAAGACCAAGAGTCACCCAGCTGCATTATCAACCAATACATATGGTGTTAAAAAAGCAGAACTGGTGAAAGCTTGTCTCTCAAGGGAGTTCTTGCTGATGAAGAGGAACTCATTTGTTTACCTTTTCAAGCTTACCCAACAATCAATATTGGCTCTGATTACAATGACACTATTCCTAAGGACTAAGATGCACCATGACACAGTGATTAATGGAGGACTTTATGCTGGTGCTTTGTTCTTCTCCTTGTATACTGTTGTGCTCAATGCAGTGGCAGAGATATCGATGACTGTAGCGAAGCTTCCAGGTTTTTTTAAGCAAAGAAAGCTACTCTTTTTTCCACCATGGGCATATGCACTTCCCACGTGGATCCTCAAGATCCCTCTCACCTGTGTTGAAGTTGGTGTTTGGGTATTTATTTCCTATTATGTCATTGGATATGATCAAATGTTGTTCAAGCAATACCTTCTCCTCCTACTCATGCATCAAATGGCTAATGCATTATTCAGATTCATTGCTGGAATTGGTAGAAGCTTGACTATTGCTAATACACTTGCCTCATTCGCAACATGCATATATGTGGCTTTGGGAGGCTTTATCCTGTCAAGAGAGAATATAAAGAAATGGTGGAAATGGGGCTACTGGATATCACCTTTGATGTATGGGCAGAATGCTATTGTAGTTAATGAGTTCCTTGGCAAGAGTTGGAGACATGAAATTCCAAACTCAACAGAATCATTAGGAATTGCTGTTCTGAAGTCTCGTGGATTCCATACACATGCATATTGGTATTGGATTGGCGCTGGAGCATTGGCTGGATACATGCTCTTTTTCAACATTTGTTACACTCTGGCTCTTACTTATCTAAACCCTTTGGACAAGCCACAGGGTGTTAAATCAGAAGAATATCAAGGCAATAAAGATGATGACAAAAGCTTGACTCCTCAAATCAGCAAAGAGAAAGGATATGGAAGTACAACTCATAACACTAAAAGAGGAATGGTTCTTCCATTTGAACCATATTCCATCACCTTCGATGAAATCTCATACTCGGTGGACATGCCACAGGAAATGAAGAACCAAGGTGTTCCTGAGGATAAATTGGTGCTCCTCAGGCGCGTGAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCTCTTATGGGAGTGAGTGGTGCTGGCAAGACAACTCTAATGGATGTACTAGCTGGTAGAAAAACTGGGGGATATATTGAGGGAAATATCACAATTTCTGGGCACCCCAAGAAGCAAGAATCATTTGCTCGGATTTCTGGATACTGTGAGCAGAATGACATCCACTCTCCACATGTTACTGTTTATGAGTCCTTGATGTACTCAGCATGGTTGCGTTTACCTGCAGAAATTGATTCTGAAACACAGAAGATGTTTGTGGAGGAAGTGATGGCACTTGTGGAGTTGGATGTGTTAAGGCACGCGCTAGTAGGGTTGCCTGGTGCTAATGGTCTCTCAACTGAGCAAAGAAAGAGGCTGACCATTGCAGTTGAACTAGTGGCTAACCCCTCCATAATTTTCATGGATGAACCAACGTCAGGTCTAGATGCAAGAGCAGCTGCGATCGTTATGAGAACAGTTAGGAACACCGTGGACACCGGAAGAACAGTTGTGTGCACCATTCATCAGCCAAGCATTGATATATTTGAATCATTTGATGAGTTATTCCTACTGAAGAAAGGAGGACAAGAGCTATACGTAGGGCCATTGGGGCGTCATTCTTGCCATTTAATTAAGTACTTCGAGGGAATTGAAAATGTCAGTAAGATTAAGGATGGCTACAATCCAGCAACTTGGATGTTGGAAGTGACCAGTTCTGCGAAAGAAATCGCTCTGGGGATCGATTTTGCTGATGTGTACAAAAAATCTGAGCTATACAGGAGAAACAGAACACTTATTGAAGAACTGAGCACCCCTCCTCCAGGTTCGAAGGACCTGTATTTCCCTACACAATACGCTCAGCCATTTTTAACACAATGCATGGCCTGTTTATGGAAACAACATTGGTCGTATTGGCGTAATCCACCATACACTGCCATAAAGTTGATATACACAACCATGCTAGCCTTGATGTTGGGGACAATGTTCTGGGACCTTGGCTCCAAAAAGACAAAACAACAAGATCTCTTCAATGTAATTGGTTCTATGTATGCTACGCTTCTCTTTCTCGGTATTAAGAATTCAACAACAGTTCAGTCCTTAGTGTCTGTCGAACGAACAGTTGTAATTGAGCTCCCTTATGTTTTTGCTCAAACAATTCTCTATGGTGTCATAGTTTATGCCATGATTGGATTAGAGTGGACTACTAAATTCTTATGGTATCTATTTTTCCTGTTTTTCACATTATTGTACTTCACCTTCTATGGTATGATGGGAGTGGCCGTTACACCAAACCTTCACGTTGCTGCTATAACTACCAGTGCATTTTATTCATTATGGAATCTTTTTTCCGGCTTCTTAATCCCACGAACTAGGATTCCTATATGGTGGAGATGGTACTATTGGGTCTGTCCAGTGGCTTGGAGCTTGTATGGATTGGCTACATCACAGTTTGGAGATTCACAGAACAACCTTGAGACGGGAGAAACTGTAGAAGAATTTATGAGGAGCTACTTTGGTTTCAAACATGAATTTCTAGGAGTGGTTGCAGCTGTGGTTGTTGGATTTGCAGTACTCTTTGCATTTATCTTTGCCTTGGCAATCAAGATGTTGAACTTCCAGAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1405

Amino Acids

158.62

Weight (kDa)

6.71

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 98 - 146 4.3e-06 ABC-transporter N-terminal
ABC_tran PF00005 172 - 353 7.2e-16 ABC transporter
ABC2_membrane PF01061 508 - 717 8.4e-43 ABC-2 type transporter
PDR_assoc PF08370 722 - 783 5e-28 Plant PDR ABC transporter associated
ABC_tran PF00005 857 - 1009 2.4e-21 ABC transporter
ABC2_membrane PF01061 1154 - 1239 3e-14 ABC-2 type transporter
ABC2_membrane PF01061 1237 - 1347 3.2e-26 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1042, 2839
AccB1I GGYRCC 1 cut(s) 2712
AccB7I CCANNNNNTGG 1 cut(s) 578
AccI GTMKAC 1 cut(s) 1709
AccII CGCG 3 cut(s) 779, 2577, 2912
AciI CCGC 3 cut(s) 54, 83, 779
AclWI GGATC 8 cut(s) 303, 539, 633, 972, 1822, 1831, 1835, 3335
AcoI YGGCCR 2 cut(s) 1299, 3867
AcsI RAATTY 8 cut(s) 674, 1102, 1391, 2175, 3667, 3797, 4085, 4118
AcuI CTGAAG 5 cut(s) 84, 1230, 1258, 2234, 3182
AcvI CACGTG 1 cut(s) 1824
AcyI GRCGYC 1 cut(s) 3202
AdeI CACNNNGTG 1 cut(s) 2348
AfiI CCNNNNNNNGG 7 cut(s) 578, 778, 960, 3026, 3410, 3480, 4066
AflII CTTAAG 1 cut(s) 920
AflIII ACRYGT 1 cut(s) 2782
AhdI GACNNNNNGTC 1 cut(s) 1470
AhlI ACTAGT 2 cut(s) 197, 2983
AjnI CCWGG 5 cut(s) 237, 1762, 2596, 2926, 3409
AloI GAACNNNNNNTCC 4 cut(s) 2193, 2225, 3949, 3981
Alw21I GWGCWC 6 cut(s) 421, 1722, 2568, 3107, 3401, 3723
Alw26I GTCTC 7 cut(s) 151, 1166, 1541, 2161, 2223, 2945, 4058
Alw44I GTGCAC 1 cut(s) 3103
AlwI GGATC 8 cut(s) 303, 539, 633, 972, 1822, 1831, 1835, 3335
AlwNI CAGNNNCTG 1 cut(s) 1169
Ama87I CYCGRG 1 cut(s) 1283
AoxI GGCC 6 cut(s) 208, 1299, 2594, 3191, 3471, 3867
ApaLI GTGCAC 1 cut(s) 3103
ApoI RAATTY 8 cut(s) 674, 1102, 1391, 2175, 3667, 3797, 4085, 4118
AseI ATTAAT 1 cut(s) 1668
Asp700I GAANNNNTTC 2 cut(s) 55, 1245
AspLEI GCGC 4 cut(s) 779, 2261, 2577, 2914
AspS9I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3191, 3421, 3580
AsuHPI GGTGA 8 cut(s) 227, 1028, 1466, 1537, 1837, 2100, 2479, 3835
AsuII TTCGAA 1 cut(s) 3416
AsuNHI GCTAGC 1 cut(s) 3550
AvaI CYCGRG 1 cut(s) 1283
AvaII GGWCC 5 cut(s) 566, 1031, 1232, 3421, 3580
AxyI CCTNAGG 3 cut(s) 1637, 2550, 2570
BaeGI GKGCMC 3 cut(s) 1430, 2715, 3107
BaeI ACNNNNGTAYC 2 cut(s) 942, 975
BamHI GGATCC 1 cut(s) 1827
BanI GGYRCC 1 cut(s) 2712
BanII GRGCYC 2 cut(s) 421, 3723
BarI GAAGNNNNNNTAC 4 cut(s) 1743, 1775, 3830, 3862
BauI CACGAG 1 cut(s) 2220
BbrPI CACGTG 1 cut(s) 1824
BbsI GAAGAC 3 cut(s) 344, 424, 590
Bbv12I GWGCWC 6 cut(s) 421, 1722, 2568, 3107, 3401, 3723
BccI CCATC 8 cut(s) 54, 224, 932, 2492, 2872, 3257, 3853, 3975
BceAI ACGGC 1 cut(s) 3854
BcgI CGANNNNNNTGC 2 cut(s) 1722, 1756
BciT130I CCWGG 5 cut(s) 239, 1764, 2598, 2928, 3411
BciVI GTATCC 2 cut(s) 2270, 2744
BclI TGATCA 1 cut(s) 1900
BcoDI GTCTC 7 cut(s) 151, 1166, 1541, 2161, 2223, 2945, 4058
BcuI ACTAGT 2 cut(s) 197, 2983
BfaI CTAG 9 cut(s) 198, 800, 2660, 2915, 2984, 3032, 3551, 3960, 4124
BfmI CTRYAG 6 cut(s) 152, 426, 1157, 1749, 2832, 4077
BfoI RGCGCY 1 cut(s) 2262
BfrI CTTAAG 1 cut(s) 920
BfuAI ACCTGC 2 cut(s) 1042, 2839
BfuI GTATCC 2 cut(s) 2270, 2744
BglI GCCNNNNNGGC 1 cut(s) 3199
BglII AGATCT 1 cut(s) 3610
BlpI GCTNAGC 1 cut(s) 3447
BmcAI AGTACT 2 cut(s) 3227, 4161
Bme1390I CCNGG 5 cut(s) 239, 1764, 2598, 2928, 3411
Bme18I GGWCC 5 cut(s) 566, 1031, 1232, 3421, 3580
BmeRI GACNNNNNGTC 1 cut(s) 1470
BmeT110I CYCGRG 1 cut(s) 1283
BmgT120I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3191, 3421, 3580
BmiI GGNNCC 6 cut(s) 567, 1234, 1829, 2714, 3581, 3589
BmrFI CCNGG 5 cut(s) 239, 1764, 2598, 2928, 3411
BmrI ACTGGG 1 cut(s) 2685
BmsI GCATC 8 cut(s) 241, 758, 786, 817, 887, 1638, 1951, 3025
BmtI GCTAGC 1 cut(s) 3554
BmuI ACTGGG 1 cut(s) 2685
BpiI GAAGAC 3 cut(s) 344, 424, 590
BplI GAGNNNNNCTC 2 cut(s) 3388, 3420
BpmI CTGGAG 5 cut(s) 260, 630, 1008, 2283, 3393
Bpu10I CCTNAGC 1 cut(s) 1038
Bpu1102I GCTNAGC 1 cut(s) 3447
Bpu14I TTCGAA 1 cut(s) 3416
BpuEI CTTGAG 5 cut(s) 189, 614, 1525, 1817, 4082
Bsa29I ATCGAT 3 cut(s) 333, 1742, 3330
BsaAI YACGTR 2 cut(s) 1824, 3187
BsaBI GATNNNNATC 1 cut(s) 624
BsaHI GRCGYC 1 cut(s) 3202
BsaI GGTCTC 1 cut(s) 2945
BsaWI WCCGGW 1 cut(s) 3086
BsaXI ACNNNNNCTCC 8 cut(s) 3391, 3421, 3572, 3602, 3855, 3885, 4062, 4092
Bsc4I CCNNNNNNNGG 7 cut(s) 578, 778, 960, 3026, 3410, 3480, 4066
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 8 cut(s) 1018, 1072, 1527, 2105, 2680, 3300, 3906, 4001
Bse21I CCTNAGG 3 cut(s) 1637, 2550, 2570
Bse3DI GCAATG 2 cut(s) 1971, 2970
Bse8I GATNNNNATC 1 cut(s) 624
BseBI CCWGG 5 cut(s) 239, 1764, 2598, 2928, 3411
BseCI ATCGAT 3 cut(s) 333, 1742, 3330
BseGI GGATG 7 cut(s) 943, 2659, 2769, 2902, 3019, 3268, 3291
BseJI GATNNNNATC 1 cut(s) 624
BseLI CCNNNNNNNGG 7 cut(s) 578, 778, 960, 3026, 3410, 3480, 4066
BseMI GCAATG 2 cut(s) 1971, 2970
BseMII CTCAG 9 cut(s) 698, 1161, 2541, 2584, 2826, 2940, 3348, 3386, 3461
BseNI ACTGG 8 cut(s) 1018, 1072, 1527, 2105, 2680, 3300, 3906, 4001
BseRI GAGGAG 5 cut(s) 1919, 2391, 2558, 3396, 4108
BseSI GKGCMC 3 cut(s) 1430, 2715, 3107
BseYI CCCAGC 1 cut(s) 1477
BsgI GTGCAG 1 cut(s) 966
Bsh1236I CGCG 3 cut(s) 779, 2577, 2912
Bsh1285I CGRYCG 1 cut(s) 3054
BshFI GGCC 6 cut(s) 210, 1301, 2596, 3193, 3473, 3869
BshNI GGYRCC 1 cut(s) 2712
BshVI ATCGAT 3 cut(s) 333, 1742, 3330
BsiEI CGRYCG 1 cut(s) 3054
BsiHKAI GWGCWC 6 cut(s) 421, 1722, 2568, 3107, 3401, 3723
BsiHKCI CYCGRG 1 cut(s) 1283
BsiSI CCGG 3 cut(s) 33, 3087, 3939
BslFI GGGAC 5 cut(s) 1150, 1218, 1266, 3580, 3593
BslI CCNNNNNNNGG 7 cut(s) 578, 778, 960, 3026, 3410, 3480, 4066
BsmAI GTCTC 7 cut(s) 151, 1166, 1541, 2161, 2223, 2945, 4058
BsmBI CGTCTC 1 cut(s) 4058
BsmFI GGGAC 5 cut(s) 1150, 1218, 1266, 3580, 3593
BsmI GAATGC 2 cut(s) 1403, 2134
BsnI GGCC 6 cut(s) 210, 1301, 2596, 3193, 3473, 3869
Bso31I GGTCTC 1 cut(s) 2945
BsoBI CYCGRG 1 cut(s) 1283
Bsp119I TTCGAA 1 cut(s) 3416
Bsp1286I GDGCHC 8 cut(s) 421, 1430, 1722, 2568, 2715, 3107, 3401, 3723
Bsp1407I TGTACA 1 cut(s) 3345
Bsp1720I GCTNAGC 1 cut(s) 3447
Bsp19I CCATGG 2 cut(s) 1266, 1802
BspACI CCGC 3 cut(s) 54, 83, 779
BspANI GGCC 6 cut(s) 210, 1301, 2596, 3193, 3473, 3869
BspCNI CTCAG 9 cut(s) 697, 1162, 2542, 2583, 2825, 2941, 3349, 3387, 3460
BspDI ATCGAT 3 cut(s) 333, 1742, 3330
BspFNI CGCG 3 cut(s) 779, 2577, 2912
BspHI TCATGA 2 cut(s) 298, 661
BspLI GGNNCC 6 cut(s) 567, 1234, 1829, 2714, 3581, 3589
BspMAI CTGCAG 3 cut(s) 156, 1161, 2836
BspMI ACCTGC 2 cut(s) 1042, 2839
BspOI GCTAGC 1 cut(s) 3554
BspPI GGATC 8 cut(s) 303, 539, 633, 972, 1822, 1831, 1835, 3335
BspT104I TTCGAA 1 cut(s) 3416
BspT107I GGYRCC 1 cut(s) 2712
BspTI CTTAAG 1 cut(s) 920
BspTNI GGTCTC 1 cut(s) 2945
BsrDI GCAATG 2 cut(s) 1971, 2970
BsrFI RCCGGY 1 cut(s) 32
BsrGI TGTACA 1 cut(s) 3345
BsrI ACTGG 8 cut(s) 1018, 1072, 1527, 2105, 2680, 3300, 3906, 4001
BssAI RCCGGY 1 cut(s) 32
BssNAI GTATAC 1 cut(s) 1710
BssNI GRCGYC 1 cut(s) 3202
BssSI CACGAG 1 cut(s) 2220
Bst1107I GTATAC 1 cut(s) 1710
Bst2BI CACGAG 1 cut(s) 2220
Bst2UI CCWGG 5 cut(s) 239, 1764, 2598, 2928, 3411
Bst6I CTCTTC 5 cut(s) 285, 798, 811, 1556, 3620
BstACI GRCGYC 1 cut(s) 3202
BstAFI CTTAAG 1 cut(s) 920
BstAUI TGTACA 1 cut(s) 3345
BstBAI YACGTR 2 cut(s) 1824, 3187
BstBI TTCGAA 1 cut(s) 3416
BstC8I GCNNGC 4 cut(s) 1164, 2635, 2910, 3552
BstDSI CCRYGG 3 cut(s) 1266, 1802, 3078
BstENI CCTNNNNNAGG 1 cut(s) 3408
BstF5I GGATG 7 cut(s) 943, 2659, 2769, 2902, 3019, 3268, 3291
BstFNI CGCG 3 cut(s) 779, 2577, 2912
BstH2I RGCGCY 1 cut(s) 2262
BstHHI GCGC 4 cut(s) 779, 2261, 2577, 2914
BstMAI GTCTC 7 cut(s) 151, 1166, 1541, 2161, 2223, 2945, 4058
BstMCI CGRYCG 1 cut(s) 3054
BstMWI GCNNNNNNNGC 6 cut(s) 761, 1783, 2021, 2572, 3044, 3199
BstNI CCWGG 5 cut(s) 239, 1764, 2598, 2928, 3411
BstNSI RCATGY 6 cut(s) 670, 2031, 2240, 2284, 2521, 2786
BstSCI CCNGG 5 cut(s) 237, 1762, 2596, 2926, 3409
BstSFI CTRYAG 6 cut(s) 152, 426, 1157, 1749, 2832, 4077
BstSLI GKGCMC 3 cut(s) 1430, 2715, 3107
BstSNI TACGTA 1 cut(s) 3187
BstUI CGCG 3 cut(s) 779, 2577, 2912
BstV2I GAAGAC 3 cut(s) 344, 424, 590
BstX2I RGATCY 4 cut(s) 625, 1827, 1836, 3610
BstXI CCANNNNNNTGG 2 cut(s) 3282, 4008
BstYI RGATCY 4 cut(s) 625, 1827, 1836, 3610
BstZ17I GTATAC 1 cut(s) 1710
Bsu15I ATCGAT 3 cut(s) 333, 1742, 3330
Bsu36I CCTNAGG 3 cut(s) 1637, 2550, 2570
BsuI GTATCC 2 cut(s) 2270, 2744
BsuRI GGCC 6 cut(s) 210, 1301, 2596, 3193, 3473, 3869
BsuTUI ATCGAT 3 cut(s) 333, 1742, 3330
BtgI CCRYGG 3 cut(s) 1266, 1802, 3078
BtsCI GGATG 7 cut(s) 943, 2659, 2769, 2902, 3019, 3268, 3291
BtsI GCAGTG 4 cut(s) 554, 1151, 1734, 3519
BtsIMutI CAGTG 8 cut(s) 532, 554, 1151, 1668, 1734, 3519, 3913, 4008
BveI ACCTGC 2 cut(s) 1042, 2839
Cac8I GCNNGC 4 cut(s) 1164, 2635, 2910, 3552
CaiI CAGNNNCTG 1 cut(s) 1169
CciI TCATGA 2 cut(s) 298, 661
CfoI GCGC 4 cut(s) 779, 2261, 2577, 2914
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3191, 3421, 3580
ClaI ATCGAT 3 cut(s) 333, 1742, 3330
CseI GACGC 1 cut(s) 3191
DraI TTTAAA 1 cut(s) 384
DraIII CACNNNGTG 1 cut(s) 2348
DriI GACNNNNNGTC 1 cut(s) 1470
EaeI YGGCCR 2 cut(s) 1299, 3867
Eam1104I CTCTTC 5 cut(s) 285, 798, 811, 1556, 3620
Eam1105I GACNNNNNGTC 1 cut(s) 1470
EarI CTCTTC 5 cut(s) 285, 798, 811, 1556, 3620
Ecl136II GAGCTC 2 cut(s) 419, 3721
Eco105I TACGTA 1 cut(s) 3187
Eco24I GRGCYC 2 cut(s) 421, 3723
Eco31I GGTCTC 1 cut(s) 2945
Eco32I GATATC 3 cut(s) 859, 1740, 2106
Eco47I GGWCC 5 cut(s) 566, 1031, 1232, 3421, 3580
Eco53kI GAGCTC 2 cut(s) 419, 3721
Eco57I CTGAAG 5 cut(s) 84, 1230, 1258, 2234, 3182
Eco72I CACGTG 1 cut(s) 1824
Eco81I CCTNAGG 3 cut(s) 1637, 2550, 2570
Eco88I CYCGRG 1 cut(s) 1283
EcoICRI GAGCTC 2 cut(s) 419, 3721
EcoNI CCTNNNNNAGG 1 cut(s) 3408
EcoO109I RGGNCCY 5 cut(s) 209, 566, 1232, 3421, 3580
EcoRI GAATTC 2 cut(s) 1391, 3667
EcoRII CCWGG 5 cut(s) 237, 1762, 2596, 2926, 3409
EcoRV GATATC 3 cut(s) 859, 1740, 2106
EcoT22I ATGCAT 5 cut(s) 1944, 1960, 2033, 2242, 3470
EcoT38I GRGCYC 2 cut(s) 421, 3723
Esp3I CGTCTC 1 cut(s) 4058
FalI AAGNNNNNCTT 6 cut(s) 488, 520, 634, 666, 1775, 1807
FaqI GGGAC 5 cut(s) 1150, 1218, 1266, 3580, 3593
FauI CCCGC 1 cut(s) 772
FauNDI CATATG 2 cut(s) 1501, 1810
FbaI TGATCA 1 cut(s) 1900
FblI GTMKAC 1 cut(s) 1709
FokI GGATG 7 cut(s) 950, 2666, 2756, 2909, 3026, 3275, 3298
FriOI GRGCYC 2 cut(s) 421, 3723
FspBI CTAG 9 cut(s) 198, 800, 2660, 2915, 2984, 3032, 3551, 3960, 4124
GlaI GCGC 4 cut(s) 778, 2260, 2576, 2913
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 5 cut(s) 260, 630, 1008, 2283, 3393
HaeII RGCGCY 1 cut(s) 2262
HaeIII GGCC 6 cut(s) 210, 1301, 2596, 3193, 3473, 3869
HapII CCGG 3 cut(s) 33, 3087, 3939
HgaI GACGC 1 cut(s) 3191
HhaI GCGC 4 cut(s) 779, 2261, 2577, 2914
Hin1I GRCGYC 1 cut(s) 3202
Hin6I GCGC 4 cut(s) 777, 2259, 2575, 2912
HinP1I GCGC 4 cut(s) 777, 2259, 2575, 2912
HincII GTYRAC 2 cut(s) 226, 710
HindII GTYRAC 2 cut(s) 226, 710
HindIII AAGCTT 5 cut(s) 1530, 1589, 1757, 1990, 2392
HpaII CCGG 3 cut(s) 33, 3087, 3939
HphI GGTGA 8 cut(s) 227, 1028, 1466, 1537, 1837, 2100, 2479, 3835
HpyAV CCTTC 8 cut(s) 485, 862, 1205, 1934, 2500, 3412, 3856, 3893
HpyCH4IV ACGT 4 cut(s) 1823, 3023, 3186, 3888
HpyF10VI GCNNNNNNNGC 6 cut(s) 761, 1783, 2021, 2572, 3044, 3199
HpySE526I ACGT 4 cut(s) 1823, 3023, 3186, 3888
Hsp92I GRCGYC 1 cut(s) 3202
HspAI GCGC 4 cut(s) 777, 2259, 2575, 2912
Ksp22I TGATCA 1 cut(s) 1900
LmnI GCTCC 8 cut(s) 241, 1339, 2264, 2571, 3593, 3726, 4011, 4095
LweI GCATC 8 cut(s) 241, 758, 786, 817, 887, 1638, 1951, 3025
MaeI CTAG 9 cut(s) 198, 800, 2660, 2915, 2984, 3032, 3551, 3960, 4124
MaeII ACGT 4 cut(s) 1823, 3023, 3186, 3888
MfeI CAATTG 1 cut(s) 360
MflI RGATCY 4 cut(s) 625, 1827, 1836, 3610
MhlI GDGCHC 8 cut(s) 421, 1430, 1722, 2568, 2715, 3107, 3401, 3723
MlyI GAGTC 3 cut(s) 1480, 2392, 2807
MmeI TCCRAC 6 cut(s) 85, 1009, 2144, 2874, 3270, 4129
Mph1103I ATGCAT 5 cut(s) 1944, 1960, 2033, 2242, 3470
MroXI GAANNNNTTC 2 cut(s) 55, 1245
MslI CAYNNNNRTG 3 cut(s) 2036, 2235, 3545
MspA1I CMGCKG 5 cut(s) 15, 395, 1481, 3047, 4139
MspCI CTTAAG 1 cut(s) 920
MspI CCGG 3 cut(s) 33, 3087, 3939
MspR9I CCNGG 5 cut(s) 239, 1764, 2598, 2928, 3411
MunI CAATTG 1 cut(s) 360
Mva1269I GAATGC 2 cut(s) 1403, 2134
MvaI CCWGG 5 cut(s) 239, 1764, 2598, 2928, 3411
MvnI CGCG 3 cut(s) 779, 2577, 2912
MwoI GCNNNNNNNGC 6 cut(s) 761, 1783, 2021, 2572, 3044, 3199
NcoI CCATGG 2 cut(s) 1266, 1802
NdeI CATATG 2 cut(s) 1501, 1810
NheI GCTAGC 1 cut(s) 3550
NlaIV GGNNCC 6 cut(s) 567, 1234, 1829, 2714, 3581, 3589
NmuCI GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3295
NsiI ATGCAT 5 cut(s) 1944, 1960, 2033, 2242, 3470
NspI RCATGY 6 cut(s) 670, 2031, 2240, 2284, 2521, 2786
NspV TTCGAA 1 cut(s) 3416
PacI TTAATTAA 1 cut(s) 3222
PagI TCATGA 2 cut(s) 298, 661
PciI ACATGT 1 cut(s) 2782
PctI GAATGC 2 cut(s) 1403, 2134
PdmI GAANNNNTTC 2 cut(s) 55, 1245
PflMI CCANNNNNTGG 1 cut(s) 578
Ple19I CGATCG 1 cut(s) 3054
PleI GAGTC 3 cut(s) 1479, 2392, 2806
PmaCI CACGTG 1 cut(s) 1824
PmlI CACGTG 1 cut(s) 1824
PpsI GAGTC 3 cut(s) 1479, 2392, 2806
Ppu21I YACGTR 2 cut(s) 1824, 3187
PpuMI RGGWCCY 4 cut(s) 566, 1232, 3421, 3580
PscI ACATGT 1 cut(s) 2782
PshBI ATTAAT 1 cut(s) 1668
Psp124BI GAGCTC 2 cut(s) 421, 3723
Psp5II RGGWCCY 4 cut(s) 566, 1232, 3421, 3580
Psp6I CCWGG 5 cut(s) 237, 1762, 2596, 2926, 3409
PspCI CACGTG 1 cut(s) 1824
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 5 cut(s) 237, 1762, 2596, 2926, 3409
PspN4I GGNNCC 6 cut(s) 567, 1234, 1829, 2714, 3581, 3589
PspPI GGNCC 7 cut(s) 209, 566, 1031, 1232, 3191, 3421, 3580
PspPPI RGGWCCY 4 cut(s) 566, 1232, 3421, 3580
PstI CTGCAG 3 cut(s) 156, 1161, 2836
PstNI CAGNNNCTG 1 cut(s) 1169
PsuI RGATCY 4 cut(s) 625, 1827, 1836, 3610
PvuI CGATCG 1 cut(s) 3054
PvuII CAGCTG 5 cut(s) 15, 395, 1481, 3047, 4139
RseI CAYNNNNRTG 3 cut(s) 2036, 2235, 3545
SacI GAGCTC 2 cut(s) 421, 3723
Sau96I GGNCC 7 cut(s) 209, 566, 1031, 1232, 3191, 3421, 3580
ScaI AGTACT 2 cut(s) 3227, 4161
SchI GAGTC 3 cut(s) 1480, 2392, 2807
ScrFI CCNGG 5 cut(s) 239, 1764, 2598, 2928, 3411
SduI GDGCHC 8 cut(s) 421, 1430, 1722, 2568, 2715, 3107, 3401, 3723
SfaNI GCATC 8 cut(s) 241, 758, 786, 817, 887, 1638, 1951, 3025
SfcI CTRYAG 6 cut(s) 152, 426, 1157, 1749, 2832, 4077
SfuI TTCGAA 1 cut(s) 3416
SinI GGWCC 5 cut(s) 566, 1031, 1232, 3421, 3580
SmiI ATTTAAAT 1 cut(s) 384
SmiMI CAYNNNNRTG 3 cut(s) 2036, 2235, 3545
SmlI CTYRAG 6 cut(s) 204, 629, 920, 1540, 1832, 4061
SmoI CTYRAG 6 cut(s) 204, 629, 920, 1540, 1832, 4061
SnaBI TACGTA 1 cut(s) 3187
SpeI ACTAGT 2 cut(s) 197, 2983
SsiI CCGC 3 cut(s) 54, 83, 779
SspI AATATT 2 cut(s) 388, 1608
SspMI CTAG 9 cut(s) 198, 800, 2660, 2915, 2984, 3032, 3551, 3960, 4124
SstI GAGCTC 2 cut(s) 421, 3723
StyD4I CCNGG 5 cut(s) 237, 1762, 2596, 2926, 3409
SwaI ATTTAAAT 1 cut(s) 384
TaiI ACGT 4 cut(s) 1826, 3026, 3189, 3891
TatI WGTACW 7 cut(s) 2432, 2656, 2808, 3225, 3345, 3837, 4159
TscAI CASTG 8 cut(s) 532, 561, 1158, 1668, 1734, 3526, 3913, 4008
TseFI GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3295
Tsp45I GTSAC 8 cut(s) 17, 35, 646, 904, 1006, 1318, 1472, 3295
TspRI CASTG 8 cut(s) 532, 561, 1158, 1668, 1734, 3526, 3913, 4008
Van91I CCANNNNNTGG 1 cut(s) 578
Vha464I CTTAAG 1 cut(s) 920
VneI GTGCAC 1 cut(s) 3103
VpaK11BI GGWCC 5 cut(s) 566, 1031, 1232, 3421, 3580
VspI ATTAAT 1 cut(s) 1668
XagI CCTNNNNNAGG 1 cut(s) 3408
XapI RAATTY 8 cut(s) 674, 1102, 1391, 2175, 3667, 3797, 4085, 4118
XbaI TCTAGA 1 cut(s) 3031
XceI RCATGY 6 cut(s) 670, 2031, 2240, 2284, 2521, 2786
XcmI CCANNNNNNNNNTGG 2 cut(s) 595, 3007
XmiI GTMKAC 1 cut(s) 1709
XmnI GAANNNNTTC 2 cut(s) 55, 1245
XspI CTAG 9 cut(s) 198, 800, 2660, 2915, 2984, 3032, 3551, 3960, 4124
ZrmI AGTACT 2 cut(s) 3227, 4161
Zsp2I ATGCAT 5 cut(s) 1944, 1960, 2033, 2242, 3470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.