Rh2AG387600
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
57921280 .. 57925633
4354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG387600.1

Sequence Viewer

Length: 1746 bp
ATGGAGGGTGTTGTAGAGGAAAAGTTAGTTCTTCTGAAGGCTGTGAGCGGTTCTTTCAGGCCAGGTGTTTTAACAGCTCTTATGGGTGTAAGTGGTGCTGGTAAAACGACTCTCATGGATGTACTGGCTGGTAGGAAAACTGGTGGATATATTGAAGGAGACATAAAAATTTCCGGGTACCCAAAGAAGCAAGAAACATTTGCTCGGATTTCTGGATATTGTGAGCAAAATGACATTCACTCCCCTCAAGTTACTGTCTACGAGTCAGTGCTCTACTCAGCATGGCTTCGTTTGCCACCTGAAGTAACATCTGAAACCAAAAAGGTGTTCATTGAGGAAGTGATGGAACTTGTGGAACTTAATCCATTAAGGCAAGCACTTGTTGGGTTGCCTGGTATCAATGGTCTTTCAACTGAGCAGCGCAAGAGGCTGACTATCGCAGTTGAGCTAGTGGCGAATCCCTCGGTAATATTCATGGATGAACCAACTTCGGGGTTAGATGCAAGAGCTGCTGCAATTGTCATGAGAACAGTTAGGAACACAGTGGATACTGGTAGAACAGTTGTGTGCACCATCCATCAGCCTAGCATTGACATTTTTGAATCTTTTGATGAGCTACTGCTACTGAAGCGGGGAGGACAAGAAATTTATGTTGGTCCATTAGGTCGCCATTCTTGCAATCTAATCAAATATTTTGAGGAAATTGAAGGAGTCCGTAAAATAAAAGATGGTTACAATCCAGCAACATGGATGTTGGATGTTTCCACTGCAGCACAAGAATTAGCTTTGGGGATTGATTTTGCTCATGTTTACAAAAACTCAGAACTATACAGGAGAAATAAGCAACTCATTACAGAATATAGCACGCCTTCCCCTTCTTCAAAGGAACTCTCTTTCCCTACTCGATACTCACAACCGTTTCTCATCCAATCTATGGCTTGCTTGTGGAAACAGCATTGGTCATATTGGCGTAACCCATCGTACAATGCAGTAAGGCTTCTCTTCACAATAGGCATAGCATTGGTGTTTGGGACAATGTTCTGGAATCTTGGCTCCAAAACGAATAGACAACAAGATCTGTTTAATGCAATGGGCTGTATGTTCACAGCTGTTATCTTTCTCGGGGTCCAAAATGCAACATCTGTGCAACCTATAGTTGCTATTGAAAGAACAGTCTTTTACAGAGAAAAAGCTGCGGGGATGTATTCAGCCTTGGCTTATGCATTTGCACAGGTTACGATTGAGCTACCATATATTTTGGTACAAGCTGTGGTTTATGGAGTCATAACTTATCTAATGATCGGATTTGAGAGAACTTTTGTTAAAATCTTTTGGTACATATTCTTCATGTTCTTCACATTGGCGTACTTCACATTTTATGGCATGATGGCTGTGGCGGTTACTCCAAACCATCACATAGCTACTATTGTTTCCAGTGCATTTTATGCAATATGGATGCTCTTTTCTGGTTTTCTTATTCCACGACCGAGGATTCCCATATGGTGGAGATGGTACTACTGGGCATGTCCAATAGCTTGGACATTGTATGGATTGATTACATCACAGTTTGGAGATGTTGATGATATGCTCGAAAATGGTGAAACAGTGAAACAGTTTTTGAGAGGTTATTTCGGTTTCAAACATGATTTTCTGGGAGTTATTGCAGTAGGGCTTGTTGGGTATGCAGTGCTCTTTGCATTCATCTTTGCCTTTTCTATAAGAGCATTTAACTTCCAAAAGCGCTAA

Protein Analysis

581

Amino Acids

65.84

Weight (kDa)

8.64

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 12 - 164 2.3e-21 ABC transporter
ABC2_membrane PF01061 310 - 523 9e-62 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 177
AccB1I GGYRCC 1 cut(s) 177
AccB7I CCANNNNNTGG 2 cut(s) 934, 1503
AccBSI CCGCTC 1 cut(s) 48
AccI GTMKAC 1 cut(s) 258
AciI CCGC 4 cut(s) 48, 631, 1196, 1397
AcsI RAATTY 2 cut(s) 168, 645
AcuI CTGAAG 3 cut(s) 56, 321, 647
AfaI GTAC 7 cut(s) 123, 179, 983, 1263, 1337, 1367, 1514
AfeI AGCGCT 1 cut(s) 1742
AfiI CCNNNNNNNGG 3 cut(s) 491, 934, 1503
AgsI TTSAA 7 cut(s) 155, 411, 602, 707, 882, 1166, 1639
AjnI CCWGG 2 cut(s) 61, 391
AjuI GAANNNNNNNTTGG 4 cut(s) 311, 343, 636, 668
AloI GAACNNNNNNTCC 2 cut(s) 879, 911
Alw21I GWGCWC 3 cut(s) 273, 572, 1692
Alw26I GTCTC 1 cut(s) 153
Alw44I GTGCAC 1 cut(s) 568
Ama87I CYCGRG 1 cut(s) 1121
Aor51HI AGCGCT 1 cut(s) 1742
AoxI GGCC 1 cut(s) 59
ApaLI GTGCAC 1 cut(s) 568
ApeKI GCWGC 5 cut(s) 418, 509, 512, 770, 1193
ApoI RAATTY 2 cut(s) 168, 645
Asp718I GGTACC 1 cut(s) 177
AspLEI GCGC 2 cut(s) 423, 1743
AspS9I GGNCC 2 cut(s) 656, 1126
AsuC2I CCSGG 1 cut(s) 175
AsuHPI GGTGA 1 cut(s) 1610
AvaI CYCGRG 1 cut(s) 1121
AvaII GGWCC 2 cut(s) 656, 1126
BaeGI GKGCMC 1 cut(s) 572
BanI GGYRCC 1 cut(s) 177
BarI GAAGNNNNNNTAC 2 cut(s) 1328, 1360
Bbv12I GWGCWC 3 cut(s) 273, 572, 1692
BbvI GCAGC 5 cut(s) 430, 496, 499, 782, 1180
BccI CCATC 8 cut(s) 337, 581, 585, 722, 985, 1381, 1419, 1503
BciT130I CCWGG 2 cut(s) 63, 393
BciVI GTATCC 1 cut(s) 541
BcnI CCSGG 1 cut(s) 175
BcoDI GTCTC 1 cut(s) 153
BfaI CTAG 2 cut(s) 449, 585
BfmI CTRYAG 2 cut(s) 768, 1152
BfoI RGCGCY 1 cut(s) 1744
BfuI GTATCC 1 cut(s) 541
BglII AGATCT 1 cut(s) 1075
BisI GCNGC 5 cut(s) 419, 510, 513, 771, 1194
BlsI GCNGC 5 cut(s) 420, 511, 514, 772, 1195
Bme1390I CCNGG 3 cut(s) 63, 175, 393
Bme18I GGWCC 2 cut(s) 656, 1126
BmeT110I CYCGRG 1 cut(s) 1121
BmgT120I GGNCC 2 cut(s) 656, 1126
BmiI GGNNCC 3 cut(s) 179, 1054, 1127
BmrFI CCNGG 3 cut(s) 63, 175, 393
BmrI ACTGGG 1 cut(s) 1528
BmsI GCATC 2 cut(s) 490, 1446
BmuI ACTGGG 1 cut(s) 1528
BpuEI CTTGAG 1 cut(s) 231
BpuMI CCSGG 1 cut(s) 175
BsaJI CCNNGG 3 cut(s) 462, 1212, 1487
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 3 cut(s) 491, 934, 1503
Bse1I ACTGG 5 cut(s) 129, 145, 556, 1434, 1523
Bse3DI GCAATG 1 cut(s) 1095
BseBI CCWGG 2 cut(s) 63, 393
BseDI CCNNGG 3 cut(s) 462, 1212, 1487
BseGI GGATG 8 cut(s) 124, 484, 573, 756, 763, 924, 1206, 1461
BseLI CCNNNNNNNGG 3 cut(s) 491, 934, 1503
BseMI GCAATG 1 cut(s) 1095
BseMII CTCAG 3 cut(s) 291, 405, 834
BseNI ACTGG 5 cut(s) 129, 145, 556, 1434, 1523
BseSI GKGCMC 1 cut(s) 572
BseXI GCAGC 5 cut(s) 430, 496, 499, 782, 1180
Bsh1285I CGRYCG 1 cut(s) 1487
BshFI GGCC 1 cut(s) 61
BshNI GGYRCC 1 cut(s) 177
BsiEI CGRYCG 1 cut(s) 1487
BsiHKAI GWGCWC 3 cut(s) 273, 572, 1692
BsiHKCI CYCGRG 1 cut(s) 1121
BsiSI CCGG 1 cut(s) 174
BslFI GGGAC 1 cut(s) 1045
BslI CCNNNNNNNGG 3 cut(s) 491, 934, 1503
BsmAI GTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 1045
BsmI GAATGC 1 cut(s) 1697
BsnI GGCC 1 cut(s) 61
BsoBI CYCGRG 1 cut(s) 1121
Bsp1286I GDGCHC 3 cut(s) 273, 572, 1692
Bsp143I GATC 2 cut(s) 1075, 1299
BspACI CCGC 4 cut(s) 48, 631, 1196, 1397
BspANI GGCC 1 cut(s) 61
BspCNI CTCAG 3 cut(s) 290, 406, 833
BspHI TCATGA 1 cut(s) 522
BspLI GGNNCC 3 cut(s) 179, 1054, 1127
BspMAI CTGCAG 1 cut(s) 772
BspT107I GGYRCC 1 cut(s) 177
BsrBI CCGCTC 1 cut(s) 48
BsrDI GCAATG 1 cut(s) 1095
BsrI ACTGG 5 cut(s) 129, 145, 556, 1434, 1523
BssECI CCNNGG 3 cut(s) 462, 1212, 1487
BssMI GATC 2 cut(s) 1075, 1299
BssT1I CCWWGG 1 cut(s) 1212
Bst2UI CCWGG 2 cut(s) 63, 393
Bst4CI ACNGT 9 cut(s) 256, 532, 544, 562, 918, 1174, 1566, 1606, 1614
Bst6I CTCTTC 1 cut(s) 1007
BstAPI GCANNNNNTGC 2 cut(s) 509, 1445
BstC8I GCNNGC 3 cut(s) 375, 866, 940
BstDEI CTNAG 3 cut(s) 277, 414, 820
BstF5I GGATG 8 cut(s) 124, 484, 573, 756, 763, 924, 1206, 1461
BstH2I RGCGCY 1 cut(s) 1744
BstHHI GCGC 2 cut(s) 423, 1743
BstKTI GATC 2 cut(s) 1078, 1302
BstMAI GTCTC 1 cut(s) 153
BstMBI GATC 2 cut(s) 1075, 1299
BstMCI CGRYCG 1 cut(s) 1487
BstMWI GCNNNNNNNGC 6 cut(s) 292, 427, 509, 628, 675, 1445
BstNI CCWGG 2 cut(s) 63, 393
BstNSI RCATGY 1 cut(s) 1527
BstSCI CCNGG 3 cut(s) 61, 173, 391
BstSFI CTRYAG 2 cut(s) 768, 1152
BstSLI GKGCMC 1 cut(s) 572
BstV1I GCAGC 5 cut(s) 430, 496, 499, 782, 1180
BstX2I RGATCY 1 cut(s) 1075
BstXI CCANNNNNNTGG 2 cut(s) 747, 1536
BstYI RGATCY 1 cut(s) 1075
BsuI GTATCC 1 cut(s) 541
BsuRI GGCC 1 cut(s) 61
BtsCI GGATG 8 cut(s) 124, 484, 573, 756, 763, 924, 1206, 1461
BtsI GCAGTG 2 cut(s) 765, 1692
BtsIMutI CAGTG 6 cut(s) 273, 549, 765, 1441, 1611, 1692
Cac8I GCNNGC 3 cut(s) 375, 866, 940
CciI TCATGA 1 cut(s) 522
CfoI GCGC 2 cut(s) 423, 1743
Cfr13I GGNCC 2 cut(s) 656, 1126
Csp6I GTAC 7 cut(s) 122, 178, 982, 1262, 1336, 1366, 1513
CviQI GTAC 7 cut(s) 122, 178, 982, 1262, 1336, 1366, 1513
DdeI CTNAG 3 cut(s) 277, 414, 820
DpnI GATC 2 cut(s) 1077, 1301
DpnII GATC 2 cut(s) 1075, 1299
Eam1104I CTCTTC 1 cut(s) 1007
EarI CTCTTC 1 cut(s) 1007
Eco130I CCWWGG 1 cut(s) 1212
Eco47I GGWCC 2 cut(s) 656, 1126
Eco47III AGCGCT 1 cut(s) 1742
Eco57I CTGAAG 3 cut(s) 56, 321, 647
Eco88I CYCGRG 1 cut(s) 1121
EcoRII CCWGG 2 cut(s) 61, 391
EcoT14I CCWWGG 1 cut(s) 1212
EcoT22I ATGCAT 1 cut(s) 1225
ErhI CCWWGG 1 cut(s) 1212
FaqI GGGAC 1 cut(s) 1045
FauI CCCGC 2 cut(s) 624, 1189
FauNDI CATATG 1 cut(s) 1499
FblI GTMKAC 1 cut(s) 258
Fnu4HI GCNGC 5 cut(s) 419, 510, 513, 771, 1194
FokI GGATG 8 cut(s) 131, 491, 560, 763, 770, 911, 1213, 1468
Fsp4HI GCNGC 5 cut(s) 419, 510, 513, 771, 1194
FspBI CTAG 2 cut(s) 449, 585
GlaI GCGC 2 cut(s) 422, 1742
GluI GCNGC 5 cut(s) 419, 510, 513, 771, 1194
HaeII RGCGCY 1 cut(s) 1744
HaeIII GGCC 1 cut(s) 61
HapII CCGG 1 cut(s) 174
HhaI GCGC 2 cut(s) 423, 1743
Hin6I GCGC 2 cut(s) 421, 1741
HinP1I GCGC 2 cut(s) 421, 1741
HinfI GANTC 8 cut(s) 109, 263, 457, 602, 711, 1045, 1281, 1492
HpaII CCGG 1 cut(s) 174
HphI GGTGA 1 cut(s) 1610
Hpy166II GTNNAC 4 cut(s) 259, 570, 811, 1104
Hpy188I TCNGA 5 cut(s) 36, 207, 313, 823, 1304
Hpy188III TCNNGA 3 cut(s) 213, 523, 1042
Hpy8I GTNNAC 4 cut(s) 259, 570, 811, 1104
HpyAV CCTTC 5 cut(s) 31, 149, 701, 879, 885
HpyCH4III ACNGT 9 cut(s) 256, 532, 544, 562, 918, 1174, 1566, 1606, 1614
HpyF10VI GCNNNNNNNGC 6 cut(s) 292, 427, 509, 628, 675, 1445
HpyF3I CTNAG 3 cut(s) 277, 414, 820
HspAI GCGC 2 cut(s) 421, 1741
KpnI GGTACC 1 cut(s) 181
Kzo9I GATC 2 cut(s) 1075, 1299
LmnI GCTCC 1 cut(s) 1058
Lsp1109I GCAGC 5 cut(s) 430, 496, 499, 782, 1180
LweI GCATC 2 cut(s) 490, 1446
MaeI CTAG 2 cut(s) 449, 585
MaeIII GTNAC 6 cut(s) 250, 304, 731, 971, 1234, 1399
MalI GATC 2 cut(s) 1077, 1301
MbiI CCGCTC 1 cut(s) 48
MboI GATC 2 cut(s) 1075, 1299
MboII GAAGA 5 cut(s) 23, 870, 994, 1336, 1345
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 1 cut(s) 1075
MhlI GDGCHC 3 cut(s) 273, 572, 1692
MluCI AATT 5 cut(s) 168, 516, 645, 702, 779
MlyI GAGTC 4 cut(s) 103, 272, 720, 1290
MmeI TCCRAC 1 cut(s) 735
MnlI CCTC 9 cut(s) 10, 255, 328, 420, 472, 629, 691, 1482, 1616
Mph1103I ATGCAT 1 cut(s) 1225
MseI TTAA 6 cut(s) 71, 360, 368, 1083, 1323, 1728
MspA1I CMGCKG 1 cut(s) 1109
MspI CCGG 1 cut(s) 174
MspR9I CCNGG 3 cut(s) 63, 175, 393
MunI CAATTG 1 cut(s) 516
Mva1269I GAATGC 1 cut(s) 1697
MvaI CCWGG 2 cut(s) 63, 393
MwoI GCNNNNNNNGC 6 cut(s) 292, 427, 509, 628, 675, 1445
NciI CCSGG 1 cut(s) 175
NdeI CATATG 1 cut(s) 1499
NdeII GATC 2 cut(s) 1075, 1299
NlaIV GGNNCC 3 cut(s) 179, 1054, 1127
NsiI ATGCAT 1 cut(s) 1225
NspI RCATGY 1 cut(s) 1527
PagI TCATGA 1 cut(s) 522
PctI GAATGC 1 cut(s) 1697
PfeI GAWTC 4 cut(s) 457, 602, 1045, 1492
PflMI CCANNNNNTGG 2 cut(s) 934, 1503
PkrI GCNGC 5 cut(s) 420, 511, 514, 772, 1195
PleI GAGTC 4 cut(s) 103, 271, 719, 1289
PpsI GAGTC 4 cut(s) 103, 271, 719, 1289
Psp6I CCWGG 2 cut(s) 61, 391
PspGI CCWGG 2 cut(s) 61, 391
PspN4I GGNNCC 3 cut(s) 179, 1054, 1127
PspPI GGNCC 2 cut(s) 656, 1126
PstI CTGCAG 1 cut(s) 772
PsuI RGATCY 1 cut(s) 1075
PvuII CAGCTG 1 cut(s) 1109
RsaI GTAC 7 cut(s) 123, 179, 983, 1263, 1337, 1367, 1514
RsaNI GTAC 7 cut(s) 122, 178, 982, 1262, 1336, 1366, 1513
SaqAI TTAA 6 cut(s) 71, 360, 368, 1083, 1323, 1728
SatI GCNGC 5 cut(s) 419, 510, 513, 771, 1194
Sau3AI GATC 2 cut(s) 1075, 1299
Sau96I GGNCC 2 cut(s) 656, 1126
SchI GAGTC 4 cut(s) 103, 272, 720, 1290
ScrFI CCNGG 3 cut(s) 63, 175, 393
SduI GDGCHC 3 cut(s) 273, 572, 1692
SfaNI GCATC 2 cut(s) 490, 1446
SfcI CTRYAG 2 cut(s) 768, 1152
SinI GGWCC 2 cut(s) 656, 1126
SmlI CTYRAG 1 cut(s) 246
SmoI CTYRAG 1 cut(s) 246
Sse9I AATT 5 cut(s) 168, 516, 645, 702, 779
SsiI CCGC 4 cut(s) 48, 631, 1196, 1397
SspI AATATT 2 cut(s) 471, 692
SspMI CTAG 2 cut(s) 449, 585
StyD4I CCNGG 3 cut(s) 61, 173, 391
StyI CCWWGG 1 cut(s) 1212
TaaI ACNGT 9 cut(s) 256, 532, 544, 562, 918, 1174, 1566, 1606, 1614
TaqI TCGA 2 cut(s) 904, 1590
TaqII GACCGA 1 cut(s) 1501
TasI AATT 5 cut(s) 168, 516, 645, 702, 779
TatI WGTACW 1 cut(s) 121
TfiI GAWTC 4 cut(s) 457, 602, 1045, 1492
Tru1I TTAA 6 cut(s) 71, 360, 368, 1083, 1323, 1728
Tru9I TTAA 6 cut(s) 71, 360, 368, 1083, 1323, 1728
TscAI CASTG 6 cut(s) 273, 549, 772, 1441, 1611, 1692
TseI GCWGC 5 cut(s) 418, 509, 512, 770, 1193
TspDTI ATGAA 5 cut(s) 319, 463, 495, 1336, 1690
TspGWI ACGGA 1 cut(s) 704
TspRI CASTG 6 cut(s) 273, 549, 772, 1441, 1611, 1692
Van91I CCANNNNNTGG 2 cut(s) 934, 1503
VneI GTGCAC 1 cut(s) 568
VpaK11BI GGWCC 2 cut(s) 656, 1126
XapI RAATTY 2 cut(s) 168, 645
XceI RCATGY 1 cut(s) 1527
XmiI GTMKAC 1 cut(s) 258
XspI CTAG 2 cut(s) 449, 585
Zsp2I ATGCAT 1 cut(s) 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.