Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0002052

Physical Location & Seq

Genomic Coordinates Forward (+)

21942450 .. 21946616

Gene Structure 4167 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1106300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGAGTACTAGTGCTAGTAAGAAAGATTTTGCTTGGCAATGGACAAAAGATGTTGATCCGGTGTCCAGATATTTCTATTGTGTGTATTGTAATCAGAAATGCACGGGCTCAATTACTAGATTCAAACATCACTTGGGTGGCATAAGTTCGGGAGGAATGGCTATTTGTAAAAAAGTCCCACCAAATGTCAAGGCACAATGCATTGCTAATATTAAAGGAATTAAACAAAGAAAGAAAGTTAGTAATGAATTGTGTTGTGGTGTCGAAGAAGAAAGTGAGAGTGTGGACATGGAAGTGAACACAACGGCATACTATGGAAATAGCTCTCGAGGGAGTGGGAGCGGGAGCGAGAGTGTTCCAGCTTCACAACACGGTTCAACTCTACCACCAAGGTCAAAGGGAGATAGGTATGTTTCTTTAGAAGCTCACCAAGCCACATTGAATACACCTTTCAAAAAAGAGGAAAGGAAACAAGTGTGCCGAAAACTTGCGCAATGGTTTTACACTAGTGCCATTCCATTCAATGCGGCAAACTCAGATTATTATTTTCAAGCAATGAAAGCGGTCTCCGACTTTGGTCCCGGTTTTGAAGCTCCTACAAGCCATGAGTATAGGACTTGGATGCTCAAAGAAGAAGTTGATGATGTACAGAGAAAGATGCAAGATCATGTAAAAGCTTGGAAGAGATATGGATGCACCATTATGATGGATGGATTGTCAGATGGTAAAAGTATGTGTCTAATTAACTTTCTTATCAATAGCCCTCGAGGTACATGGTTTTTGAAATCGGTTGATGCATCAGCCTCCATTAAAAATGGAGATTTGTTATATGGCTACTTGGATGATGTTATACAAGAAATTGGGGAGGAGAATGTAGTTCAAGTCATATCCAATAATGCTTCCAACTACAAGAATGTGGGGGCAAAACTTATGGAGAGAAAAGAGAAGTTGTGGTGGACTCAATGTGCGGCTCACTGCATTGATTTGATGCTAAAGGATATTGCTAAGATGAAATGTTTTGATGACACACTTGAACATGCTAAGTGTATAACGAAGTATCTTTATGGGCATCAATGGGTACTCGCTTTGATGAGAAAGTTCACCAACAATACGGAAATTCTTCGTCCAGCAGTCACTAGGTTTGCCACTTCTTTTCTTACACTTCAAATCTTACAAAAGCAAAAGGAGAATCTTGTTGCTTTGTTTTCCTCCCAAGAATGGTCTGAAAGTACCTATGCAAAATCCCGTGAAGCAAAGTTGGCTAAGTATTATGTGATACATGATCATGAGTTTTGGGGTAGAGTTTCCTTTTGCGTTAGAGGTGTTCTTCCACTTGTTTGTGTCTTGAGAGAGGTTGACTCGGAAGAGAGACCTGTCATGGGATTTATATATGAGTTGATAGATGTCGTAAAAGAGAAAATTGCTAACAATCTTAACAAAGTGGAGAAAAAGTATATGCCAATTTGGAAAAAGATAGATTATAGATGGAACGATCAACTTCACCAACCATTATATGCGGCAGGCTATTACTTGAATCCACAATTTCGGTATGAAGATAATTTCTCAAATACTGAAGAAATAAGAAAAGGGTTGTTTGCTTGCATGGATAGGATGCTTGGAAATTCCAAAGAACGTGAAGATGCGGATATCCAATTGGACTCATATGATCGTAGACTTGGTAATTTTGCGGATCCTTTGGCAATGAAAACTAGGAAAAGGCGAACACCTTTGGGTTGGTGGCAGCGTTTTGGGTATCGAACACCTGAGTTGATGATGTTTGCCATACGTGTTCTTGGCCTTACTTGTAGTTCATCGGGATGTGAGAGGAATTGGAGCACATTCCAAATGATTCATAAAAAAAAGAGGAATAGACTTGAACACAAAAGGCTAAATGCTTTAGCATATGTGAAGTATAATTTGGCTTTAAGCGAGCGAAGTCTTAAAAGAAGTGGGAGGTGTGATCCGATTGTTGTAGAAGAAATTGACTCGGATGATGAATGGATAACGGAACGAGAAGATCCCGTTCTTCCCCAAGATCCTAGATGGCTTGAAGATGAGTCATTGTTCAATGCGGAGGCCGTAAGGAATGTGCCAATCCCCATTTATGAAGATAACTCACAAGTTGGAGACCCTAGAGAGCCTTCTCCTCCTCCTCCTCGTGAGCCTACTCTCTGTGAACTTACTCCGCCCCATGAGCCAACTCAACCTCGAGTTCTTATTACCTACAAAAGAAAACGCATTAATGAGGAAACCTCGAGTCGAAGAAACAAAATTTTGAAGGATAAGTCAGAAGATTCTTTTGAAGACTATTTGACACAACGTTCAAGTTCAACTAGACTTGGCAATGAAGAAGATGATATTACCTTTGATTTGGATGAAGAGGATTTGAGTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

799

Amino Acids

92.25

Weight (kDa)

7.9

Isoelectric Point (pI)

44.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF659	PF04937	199 - 350	5.3e-56	Domain of unknown function (DUF659)
Dimer_Tnp_hAT	PF05699	567 - 640	5.9e-13	hAT family C-terminal dimerisation region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G36095 AT5G33406
fragaria_vesca	FvH4_2g19761 FvH4_2g31910 FvH4_3g32805 FvH4_3g33921 FvH4_3g33922 FvH4_4g11993 FvH4_5g36511 FvH4_6g16931 FvH4_6g16931
malus_domestica	MD01G1106300.v1.1 MD01G1106700.v1.1 MD08G1077600.v1.1
pyrus_communis	pycom01g13300 pycom06g05900 pycom12g14200 pycom13g27730 pycom16g16790
rosa_chinensis	RchiOBHm_Chr1g0361961 RchiOBHm_Chr1g0361981 RchiOBHm_Chr2g0141951 RchiOBHm_Chr7g0218361
rosa_multiflora	Rmu_co8147950.1_g000001 Rmu_co8356159.1_g000001 Rmu_sc0000117.1_g000022 Rmu_sc0007718.1_g000001
rosa_roxburghii	Rroxscaffold_2G00097000 Rroxscaffold_2G00126330 Rroxscaffold_4G00304630 Rroxscaffold_5G00366570 Rroxscaffold_5G00366580
rosa_rugosa	Rorug03G0268800 Rorug03G0268900 Rorug05G0477700 Rorug05G0477800 RorugPtG0003500.1
rosa_samantha	Rh1AG259100 Rh4AG027200 Rh7CG313700
rosa_wichuraiana	Rw0G004680 Rw1G026970 Rw4G019360 Rw6G028600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	765
Acc16I	TGCGCA	1 cut(s)	492
AccBSI	CCGCTC	1 cut(s)	342
AccI	GTMKAC	1 cut(s)	1672
AciI	CCGC	9 cut(s)	342, 527, 563, 968, 1517, 1643, 1688, 2072, 2186
AclI	AACGTT	1 cut(s)	2320
AclWI	GGATC	6 cut(s)	50, 1685, 1698, 1955, 2012, 2030
AcsI	RAATTY	3 cut(s)	1116, 1621, 2271
AcuI	CTGAAG	1 cut(s)	1593
AfaI	GTAC	5 cut(s)	7, 648, 772, 1080, 1231
AfiI	CCNNNNNNNGG	2 cut(s)	1218, 1379
AflIII	ACRYGT	1 cut(s)	1786
AhlI	ACTAGT	2 cut(s)	8, 506
AjuI	GAANNNNNNNTTGG	2 cut(s)	1901, 1933
AleI	CACNNNNGTG	1 cut(s)	135
AluBI	AGCT	5 cut(s)	324, 362, 425, 593, 677
AluI	AGCT	5 cut(s)	324, 362, 425, 593, 677
Alw21I	GWGCWC	1 cut(s)	1838
Alw26I	GTCTC	3 cut(s)	571, 1363, 2121
AlwI	GGATC	6 cut(s)	50, 1685, 1698, 1955, 2012, 2030
Ama87I	CYCGRG	4 cut(s)	327, 765, 2208, 2254
AoxI	GGCC	2 cut(s)	1795, 2076
ApeKI	GCWGC	1 cut(s)	1741
ApoI	RAATTY	3 cut(s)	1116, 1621, 2271
AseI	ATTAAT	1 cut(s)	2241
Asp700I	GAANNNNTTC	1 cut(s)	1119
AspLEI	GCGC	1 cut(s)	493
AspS9I	GGNCC	1 cut(s)	578
AsuC2I	CCSGG	1 cut(s)	582
AsuHPI	GGTGA	3 cut(s)	419, 1093, 1493
AvaI	CYCGRG	4 cut(s)	327, 765, 2208, 2254
AvaII	GGWCC	1 cut(s)	578
BamHI	GGATCC	1 cut(s)	1690
BanII	GRGCYC	1 cut(s)	110
BauI	CACGAG	1 cut(s)	2157
BbsI	GAAGAC	1 cut(s)	2310
Bbv12I	GWGCWC	1 cut(s)	1838
BbvI	GCAGC	1 cut(s)	1753
BccI	CCATC	5 cut(s)	700, 704, 716, 1479, 2037
BceAI	ACGGC	2 cut(s)	321, 2063
BclI	TGATCA	1 cut(s)	1282
BcnI	CCSGG	1 cut(s)	582
BcoDI	GTCTC	3 cut(s)	571, 1363, 2121
BcuI	ACTAGT	2 cut(s)	8, 506
BfaI	CTAG	9 cut(s)	9, 15, 117, 507, 1137, 1710, 2040, 2133, 2334
BisI	GCNGC	4 cut(s)	528, 969, 1518, 1742
BlsI	GCNGC	4 cut(s)	529, 970, 1519, 1743
BmcAI	AGTACT	1 cut(s)	7
Bme1390I	CCNGG	1 cut(s)	582
Bme18I	GGWCC	1 cut(s)	578
BmeT110I	CYCGRG	4 cut(s)	327, 765, 2208, 2254
BmgT120I	GGNCC	1 cut(s)	578
BmiI	GGNNCC	2 cut(s)	580, 1692
BmrFI	CCNGG	1 cut(s)	582
BmsI	GCATC	9 cut(s)	612, 648, 683, 784, 806, 978, 1078, 1602, 1630
BoxI	GACNNNNGTC	1 cut(s)	576
BpiI	GAAGAC	1 cut(s)	2310
BplI	GAGNNNNNCTC	4 cut(s)	1343, 1375, 2237, 2269
BpuEI	CTTGAG	1 cut(s)	1366
BpuMI	CCSGG	1 cut(s)	582
BsaAI	YACGTR	1 cut(s)	1787
BsaBI	GATNNNNATC	1 cut(s)	54
BsaI	GGTCTC	3 cut(s)	571, 1363, 2121
BsaJI	CCNNGG	1 cut(s)	389
BsaWI	WCCGGW	1 cut(s)	58
BsaXI	ACNNNNNCTCC	4 cut(s)	337, 367, 1436, 1466
Bsc4I	CCNNNNNNNGG	2 cut(s)	1218, 1379
Bse3DI	GCAATG	6 cut(s)	44, 201, 500, 561, 1707, 2350
Bse8I	GATNNNNATC	1 cut(s)	54
BseDI	CCNNGG	1 cut(s)	389
BseGI	GGATG	8 cut(s)	627, 698, 715, 847, 1617, 1823, 1996, 2380
BseJI	GATNNNNATC	1 cut(s)	54
BseLI	CCNNNNNNNGG	2 cut(s)	1218, 1379
BseMI	GCAATG	6 cut(s)	44, 201, 500, 561, 1707, 2350
BseMII	CTCAG	2 cut(s)	549, 1755
BseRI	GAGGAG	5 cut(s)	881, 2136, 2139, 2142, 2145
BseXI	GCAGC	1 cut(s)	1753
BshFI	GGCC	2 cut(s)	1797, 2078
BsiHKAI	GWGCWC	1 cut(s)	1838
BsiHKCI	CYCGRG	4 cut(s)	327, 765, 2208, 2254
BsiSI	CCGG	2 cut(s)	59, 582
BslFI	GGGAC	2 cut(s)	161, 564
BslI	CCNNNNNNNGG	2 cut(s)	1218, 1379
BsmAI	GTCTC	3 cut(s)	571, 1363, 2121
BsmFI	GGGAC	2 cut(s)	161, 564
BsnI	GGCC	2 cut(s)	1797, 2078
Bso31I	GGTCTC	3 cut(s)	571, 1363, 2121
BsoBI	CYCGRG	4 cut(s)	327, 765, 2208, 2254
Bsp1286I	GDGCHC	2 cut(s)	110, 1838
Bsp1407I	TGTACA	1 cut(s)	646
Bsp143I	GATC	9 cut(s)	55, 664, 1282, 1492, 1666, 1690, 1960, 2017, 2035
BspACI	CCGC	9 cut(s)	342, 527, 563, 968, 1517, 1643, 1688, 2072, 2186
BspANI	GGCC	2 cut(s)	1797, 2078
BspCNI	CTCAG	2 cut(s)	548, 1756
BspHI	TCATGA	1 cut(s)	1285
BspLI	GGNNCC	2 cut(s)	580, 1692
BspPI	GGATC	6 cut(s)	50, 1685, 1698, 1955, 2012, 2030
BspTNI	GGTCTC	3 cut(s)	571, 1363, 2121
BsrBI	CCGCTC	1 cut(s)	342
BsrDI	GCAATG	6 cut(s)	44, 201, 500, 561, 1707, 2350
BsrGI	TGTACA	1 cut(s)	646
BssECI	CCNNGG	1 cut(s)	389
BssMI	GATC	9 cut(s)	55, 664, 1282, 1492, 1666, 1690, 1960, 2017, 2035
BssSI	CACGAG	1 cut(s)	2157
BssT1I	CCWWGG	1 cut(s)	389
Bst2BI	CACGAG	1 cut(s)	2157
Bst4CI	ACNGT	1 cut(s)	374
Bst6I	CTCTTC	3 cut(s)	677, 1359, 2373
BstAUI	TGTACA	1 cut(s)	646
BstBAI	YACGTR	1 cut(s)	1787
BstC8I	GCNNGC	3 cut(s)	1522, 1600, 1931
BstDEI	CTNAG	5 cut(s)	535, 1005, 1041, 1263, 1764
BstF5I	GGATG	8 cut(s)	627, 698, 715, 847, 1617, 1823, 1996, 2380
BstHHI	GCGC	1 cut(s)	493
BstKTI	GATC	9 cut(s)	58, 667, 1285, 1495, 1669, 1693, 1963, 2020, 2038
BstMAI	GTCTC	3 cut(s)	571, 1363, 2121
BstMBI	GATC	9 cut(s)	55, 664, 1282, 1492, 1666, 1690, 1960, 2017, 2035
BstMWI	GCNNNNNNNGC	4 cut(s)	431, 560, 1259, 2194
BstNSI	RCATGY	1 cut(s)	1040
BstPAI	GACNNNNGTC	1 cut(s)	576
BstSCI	CCNGG	1 cut(s)	580
BstV1I	GCAGC	1 cut(s)	1753
BstV2I	GAAGAC	1 cut(s)	2310
BstX2I	RGATCY	3 cut(s)	1690, 2017, 2035
BstXI	CCANNNNNNTGG	1 cut(s)	706
BstYI	RGATCY	3 cut(s)	1690, 2017, 2035
BsuRI	GGCC	2 cut(s)	1797, 2078
BtsCI	GGATG	8 cut(s)	627, 698, 715, 847, 1617, 1823, 1996, 2380
BtsI	GCAGTG	1 cut(s)	973
BtsIMutI	CAGTG	1 cut(s)	973
Cac8I	GCNNGC	3 cut(s)	1522, 1600, 1931
CciI	TCATGA	1 cut(s)	1285
CfoI	GCGC	1 cut(s)	493
Cfr13I	GGNCC	1 cut(s)	578
Csp6I	GTAC	5 cut(s)	6, 647, 771, 1079, 1230
CviQI	GTAC	5 cut(s)	6, 647, 771, 1079, 1230
DdeI	CTNAG	5 cut(s)	535, 1005, 1041, 1263, 1764
DpnI	GATC	9 cut(s)	57, 666, 1284, 1494, 1668, 1692, 1962, 2019, 2037
DpnII	GATC	9 cut(s)	55, 664, 1282, 1492, 1666, 1690, 1960, 2017, 2035
Eam1104I	CTCTTC	3 cut(s)	677, 1359, 2373
EarI	CTCTTC	3 cut(s)	677, 1359, 2373
EciI	GGCGGA	1 cut(s)	2175
Eco130I	CCWWGG	1 cut(s)	389
Eco24I	GRGCYC	1 cut(s)	110
Eco31I	GGTCTC	3 cut(s)	571, 1363, 2121
Eco32I	GATATC	1 cut(s)	1648
Eco47I	GGWCC	1 cut(s)	578
Eco57I	CTGAAG	1 cut(s)	1593
Eco88I	CYCGRG	4 cut(s)	327, 765, 2208, 2254
EcoRV	GATATC	1 cut(s)	1648
EcoT14I	CCWWGG	1 cut(s)	389
EcoT22I	ATGCAT	2 cut(s)	203, 799
EcoT38I	GRGCYC	1 cut(s)	110
ErhI	CCWWGG	1 cut(s)	389
FaqI	GGGAC	2 cut(s)	161, 564
FauI	CCCGC	1 cut(s)	335
FauNDI	CATATG	2 cut(s)	1663, 1903
FbaI	TGATCA	1 cut(s)	1282
FblI	GTMKAC	1 cut(s)	1672
Fnu4HI	GCNGC	4 cut(s)	528, 969, 1518, 1742
FokI	GGATG	8 cut(s)	634, 705, 722, 854, 1624, 1830, 2003, 2387
FriOI	GRGCYC	1 cut(s)	110
Fsp4HI	GCNGC	4 cut(s)	528, 969, 1518, 1742
FspBI	CTAG	9 cut(s)	9, 15, 117, 507, 1137, 1710, 2040, 2133, 2334
FspI	TGCGCA	1 cut(s)	492
GlaI	GCGC	1 cut(s)	492
GluI	GCNGC	4 cut(s)	528, 969, 1518, 1742
HaeIII	GGCC	2 cut(s)	1797, 2078
HapII	CCGG	2 cut(s)	59, 582
HhaI	GCGC	1 cut(s)	493
Hin6I	GCGC	1 cut(s)	491
HinP1I	GCGC	1 cut(s)	491
HincII	GTYRAC	1 cut(s)	1357
HindII	GTYRAC	1 cut(s)	1357
HindIII	AAGCTT	1 cut(s)	675
HpaII	CCGG	2 cut(s)	59, 582
HphI	GGTGA	3 cut(s)	419, 1093, 1493
Hpy166II	GTNNAC	7 cut(s)	286, 298, 957, 1101, 1357, 1673, 2177
Hpy188I	TCNGA	9 cut(s)	96, 538, 571, 721, 1225, 1363, 1965, 1990, 2290
Hpy188III	TCNNGA	7 cut(s)	66, 150, 327, 1286, 1345, 1815, 2159
Hpy8I	GTNNAC	7 cut(s)	286, 298, 957, 1101, 1357, 1673, 2177
HpyAV	CCTTC	2 cut(s)	2151, 2272
HpyCH4III	ACNGT	1 cut(s)	374
HpyCH4IV	ACGT	3 cut(s)	1633, 1786, 2320
HpyCH4V	TGCA	8 cut(s)	102, 201, 661, 696, 797, 978, 1238, 1602
HpyF10VI	GCNNNNNNNGC	4 cut(s)	431, 560, 1259, 2194
HpyF3I	CTNAG	5 cut(s)	535, 1005, 1041, 1263, 1764
HpySE526I	ACGT	3 cut(s)	1633, 1786, 2320
HspAI	GCGC	1 cut(s)	491
Ksp22I	TGATCA	1 cut(s)	1282
Kzo9I	GATC	9 cut(s)	55, 664, 1282, 1492, 1666, 1690, 1960, 2017, 2035
LmnI	GCTCC	4 cut(s)	339, 345, 598, 1833
LpnPI	CCDG	8 cut(s)	72, 79, 372, 595, 1140, 1386, 1506, 1776
Lsp1109I	GCAGC	1 cut(s)	1753
LweI	GCATC	9 cut(s)	612, 648, 683, 784, 806, 978, 1078, 1602, 1630
MaeI	CTAG	9 cut(s)	9, 15, 117, 507, 1137, 1710, 2040, 2133, 2334
MaeII	ACGT	3 cut(s)	1633, 1786, 2320
MaeIII	GTNAC	1 cut(s)	1132
MalI	GATC	9 cut(s)	57, 666, 1284, 1494, 1668, 1692, 1962, 2019, 2037
MbiI	CCGCTC	1 cut(s)	342
MboI	GATC	9 cut(s)	55, 664, 1282, 1492, 1666, 1690, 1960, 2017, 2035
MfeI	CAATTG	1 cut(s)	1652
MflI	RGATCY	3 cut(s)	1690, 2017, 2035
MhlI	GDGCHC	2 cut(s)	110, 1838
MlyI	GAGTC	6 cut(s)	952, 1352, 1652, 1979, 2066, 2266
MmeI	TCCRAC	3 cut(s)	594, 927, 2104
Mph1103I	ATGCAT	2 cut(s)	203, 799
MroXI	GAANNNNTTC	1 cut(s)	1119
MseI	TTAA	8 cut(s)	213, 222, 744, 810, 1434, 1925, 1941, 2241
MslI	CAYNNNNRTG	6 cut(s)	135, 293, 701, 704, 1284, 1816
MspI	CCGG	2 cut(s)	59, 582
MspR9I	CCNGG	1 cut(s)	582
MunI	CAATTG	1 cut(s)	1652
MwoI	GCNNNNNNNGC	4 cut(s)	431, 560, 1259, 2194
NciI	CCSGG	1 cut(s)	582
NdeI	CATATG	2 cut(s)	1663, 1903
NdeII	GATC	9 cut(s)	55, 664, 1282, 1492, 1666, 1690, 1960, 2017, 2035
NlaIV	GGNNCC	2 cut(s)	580, 1692
NmuCI	GTSAC	1 cut(s)	1132
NsbI	TGCGCA	1 cut(s)	492
NsiI	ATGCAT	2 cut(s)	203, 799
NspI	RCATGY	1 cut(s)	1040
OliI	CACNNNNGTG	1 cut(s)	135
PaeR7I	CTCGAG	4 cut(s)	327, 765, 2208, 2254
PagI	TCATGA	1 cut(s)	1285
PdmI	GAANNNNTTC	1 cut(s)	1119
PfeI	GAWTC	5 cut(s)	120, 1189, 1534, 1849, 2294
PkrI	GCNGC	4 cut(s)	529, 970, 1519, 1743
PleI	GAGTC	6 cut(s)	952, 1352, 1652, 1979, 2065, 2265
PpsI	GAGTC	6 cut(s)	952, 1352, 1652, 1979, 2065, 2265
Ppu21I	YACGTR	1 cut(s)	1787
PshAI	GACNNNNGTC	1 cut(s)	576
PshBI	ATTAAT	1 cut(s)	2241
Psp1406I	AACGTT	1 cut(s)	2320
PspN4I	GGNNCC	2 cut(s)	580, 1692
PspPI	GGNCC	1 cut(s)	578
PspXI	VCTCGAGB	3 cut(s)	765, 2208, 2254
PsuI	RGATCY	3 cut(s)	1690, 2017, 2035
RsaI	GTAC	5 cut(s)	7, 648, 772, 1080, 1231
RsaNI	GTAC	5 cut(s)	6, 647, 771, 1079, 1230
RseI	CAYNNNNRTG	6 cut(s)	135, 293, 701, 704, 1284, 1816
SaqAI	TTAA	8 cut(s)	213, 222, 744, 810, 1434, 1925, 1941, 2241
SatI	GCNGC	4 cut(s)	528, 969, 1518, 1742
Sau3AI	GATC	9 cut(s)	55, 664, 1282, 1492, 1666, 1690, 1960, 2017, 2035
Sau96I	GGNCC	1 cut(s)	578
ScaI	AGTACT	1 cut(s)	7
SchI	GAGTC	6 cut(s)	952, 1352, 1652, 1979, 2066, 2266
ScrFI	CCNGG	1 cut(s)	582
SduI	GDGCHC	2 cut(s)	110, 1838
SfaNI	GCATC	9 cut(s)	612, 648, 683, 784, 806, 978, 1078, 1602, 1630
Sfr274I	CTCGAG	4 cut(s)	327, 765, 2208, 2254
SinI	GGWCC	1 cut(s)	578
SlaI	CTCGAG	4 cut(s)	327, 765, 2208, 2254
SmiMI	CAYNNNNRTG	6 cut(s)	135, 293, 701, 704, 1284, 1816
SmlI	CTYRAG	5 cut(s)	327, 765, 1345, 2208, 2254
SmoI	CTYRAG	5 cut(s)	327, 765, 1345, 2208, 2254
SpeI	ACTAGT	2 cut(s)	8, 506
SsiI	CCGC	9 cut(s)	342, 527, 563, 968, 1517, 1643, 1688, 2072, 2186
SspI	AATATT	1 cut(s)	211
SspMI	CTAG	9 cut(s)	9, 15, 117, 507, 1137, 1710, 2040, 2133, 2334
StyD4I	CCNGG	1 cut(s)	580
StyI	CCWWGG	1 cut(s)	389
TaaI	ACNGT	1 cut(s)	374
TaiI	ACGT	3 cut(s)	1636, 1789, 2323
TaqI	TCGA	7 cut(s)	264, 328, 766, 1756, 2209, 2255, 2260
TatI	WGTACW	2 cut(s)	5, 646
TauI	GCSGC	3 cut(s)	530, 971, 1520
TfiI	GAWTC	5 cut(s)	120, 1189, 1534, 1849, 2294
Tru1I	TTAA	8 cut(s)	213, 222, 744, 810, 1434, 1925, 1941, 2241
Tru9I	TTAA	8 cut(s)	213, 222, 744, 810, 1434, 1925, 1941, 2241
TscAI	CASTG	1 cut(s)	980
TseFI	GTSAC	1 cut(s)	1132
TseI	GCWGC	1 cut(s)	1741
Tsp45I	GTSAC	1 cut(s)	1132
TspGWI	ACGGA	2 cut(s)	1127, 2021
TspRI	CASTG	1 cut(s)	980
VpaK11BI	GGWCC	1 cut(s)	578
VspI	ATTAAT	1 cut(s)	2241
XapI	RAATTY	3 cut(s)	1116, 1621, 2271
XceI	RCATGY	1 cut(s)	1040
XhoI	CTCGAG	4 cut(s)	327, 765, 2208, 2254
XmiI	GTMKAC	1 cut(s)	1672
XmnI	GAANNNNTTC	1 cut(s)	1119
XspI	CTAG	9 cut(s)	9, 15, 117, 507, 1137, 1710, 2040, 2133, 2334
ZrmI	AGTACT	1 cut(s)	7
Zsp2I	ATGCAT	2 cut(s)	203, 799

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.