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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G36095 AT5G33406 |
| fragaria_vesca | FvH4_2g19761 FvH4_2g31910 FvH4_3g32805 FvH4_3g33921 FvH4_3g33922 FvH4_4g11993 FvH4_5g36511 FvH4_6g16931 FvH4_6g16931 |
| malus_domestica | MD01G1106300.v1.1 MD01G1106700.v1.1 MD08G1077600.v1.1 |
| pyrus_communis | pycom01g13300 pycom06g05900 pycom12g14200 pycom13g27730 pycom16g16790 |
| rosa_chinensis | RchiOBHm_Chr1g0361961 RchiOBHm_Chr1g0361981 RchiOBHm_Chr2g0141951 RchiOBHm_Chr7g0218361 |
| rosa_multiflora | Rmu_co8147950.1_g000001 Rmu_co8356159.1_g000001 Rmu_sc0000117.1_g000022 Rmu_sc0007718.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00097000 Rroxscaffold_2G00126330 Rroxscaffold_4G00304630 Rroxscaffold_5G00366570 Rroxscaffold_5G00366580 |
| rosa_rugosa | Rorug03G0268800 Rorug03G0268900 Rorug05G0477700 Rorug05G0477800 RorugPtG0003500.1 |
| rosa_samantha | Rh1AG259100 Rh4AG027200 Rh7CG313700 |
| rosa_wichuraiana | Rw0G004680 Rw1G026970 Rw4G019360 Rw6G028600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 492 |
| AccII | CGCG | 1 cut(s) | 1635 |
| AciI | CCGC | 9 cut(s) | 527, 563, 968, 1517, 1520, 1643, 1688, 2072, 2186 |
| AclWI | GGATC | 6 cut(s) | 50, 1685, 1698, 1955, 2012, 2030 |
| AcsI | RAATTY | 3 cut(s) | 1116, 1302, 1621 |
| AcuI | CTGAAG | 1 cut(s) | 1593 |
| AfaI | GTAC | 6 cut(s) | 7, 648, 697, 772, 1080, 1231 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1218 |
| AhlI | ACTAGT | 1 cut(s) | 8 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1901, 1933 |
| AleI | CACNNNNGTG | 1 cut(s) | 135 |
| AluBI | AGCT | 5 cut(s) | 324, 362, 425, 593, 677 |
| AluI | AGCT | 5 cut(s) | 324, 362, 425, 593, 677 |
| Alw21I | GWGCWC | 1 cut(s) | 1838 |
| Alw26I | GTCTC | 2 cut(s) | 571, 1363 |
| AlwI | GGATC | 6 cut(s) | 50, 1685, 1698, 1955, 2012, 2030 |
| Ama87I | CYCGRG | 3 cut(s) | 327, 2208, 2254 |
| AoxI | GGCC | 3 cut(s) | 801, 1795, 2076 |
| ApeKI | GCWGC | 1 cut(s) | 1741 |
| ApoI | RAATTY | 3 cut(s) | 1116, 1302, 1621 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2348, 2380 |
| AseI | ATTAAT | 1 cut(s) | 2241 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1119 |
| AspA2I | CCTAGG | 1 cut(s) | 389 |
| AspLEI | GCGC | 1 cut(s) | 493 |
| AspS9I | GGNCC | 1 cut(s) | 578 |
| AsuC2I | CCSGG | 1 cut(s) | 582 |
| AsuHPI | GGTGA | 4 cut(s) | 419, 1093, 1493, 1691 |
| AvaI | CYCGRG | 3 cut(s) | 327, 2208, 2254 |
| AvaII | GGWCC | 1 cut(s) | 578 |
| AvrII | CCTAGG | 1 cut(s) | 389 |
| BamHI | GGATCC | 1 cut(s) | 1690 |
| BanII | GRGCYC | 1 cut(s) | 110 |
| BauI | CACGAG | 1 cut(s) | 2154 |
| BbsI | GAAGAC | 1 cut(s) | 2310 |
| Bbv12I | GWGCWC | 1 cut(s) | 1838 |
| BbvI | GCAGC | 1 cut(s) | 1753 |
| BccI | CCATC | 6 cut(s) | 704, 708, 716, 1479, 1790, 2037 |
| BceAI | ACGGC | 2 cut(s) | 321, 2063 |
| BclI | TGATCA | 1 cut(s) | 1282 |
| BcnI | CCSGG | 1 cut(s) | 582 |
| BcoDI | GTCTC | 2 cut(s) | 571, 1363 |
| BcuI | ACTAGT | 1 cut(s) | 8 |
| BisI | GCNGC | 4 cut(s) | 528, 969, 1518, 1742 |
| BlnI | CCTAGG | 1 cut(s) | 389 |
| BlsI | GCNGC | 4 cut(s) | 529, 970, 1519, 1743 |
| BmcAI | AGTACT | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 1 cut(s) | 582 |
| Bme18I | GGWCC | 1 cut(s) | 578 |
| BmeT110I | CYCGRG | 3 cut(s) | 327, 2208, 2254 |
| BmgT120I | GGNCC | 1 cut(s) | 578 |
| BmiI | GGNNCC | 2 cut(s) | 580, 1692 |
| BmrFI | CCNGG | 1 cut(s) | 582 |
| BmsI | GCATC | 8 cut(s) | 612, 648, 784, 806, 1078, 1602, 1630, 1820 |
| BoxI | GACNNNNGTC | 1 cut(s) | 576 |
| BpiI | GAAGAC | 1 cut(s) | 2310 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1343, 1375, 2237, 2269 |
| BpuEI | CTTGAG | 2 cut(s) | 750, 1366 |
| BpuMI | CCSGG | 1 cut(s) | 582 |
| BsaBI | GATNNNNATC | 1 cut(s) | 54 |
| BsaI | GGTCTC | 1 cut(s) | 571 |
| BsaJI | CCNNGG | 2 cut(s) | 389, 1377 |
| BsaWI | WCCGGW | 1 cut(s) | 58 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 325, 355, 1436, 1466 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1218 |
| Bse3DI | GCAATG | 6 cut(s) | 44, 201, 500, 561, 1707, 2350 |
| Bse8I | GATNNNNATC | 1 cut(s) | 54 |
| BseDI | CCNNGG | 2 cut(s) | 389, 1377 |
| BseJI | GATNNNNATC | 1 cut(s) | 54 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1218 |
| BseMI | GCAATG | 6 cut(s) | 44, 201, 500, 561, 1707, 2350 |
| BseMII | CTCAG | 3 cut(s) | 549, 1755, 2001 |
| BseRI | GAGGAG | 5 cut(s) | 881, 2136, 2139, 2142, 2157 |
| BseXI | GCAGC | 1 cut(s) | 1753 |
| Bsh1236I | CGCG | 1 cut(s) | 1635 |
| BshFI | GGCC | 3 cut(s) | 803, 1797, 2078 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1838 |
| BsiHKCI | CYCGRG | 3 cut(s) | 327, 2208, 2254 |
| BsiSI | CCGG | 2 cut(s) | 59, 582 |
| BslFI | GGGAC | 2 cut(s) | 161, 564 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1218 |
| BsmAI | GTCTC | 2 cut(s) | 571, 1363 |
| BsmFI | GGGAC | 2 cut(s) | 161, 564 |
| BsmI | GAATGC | 1 cut(s) | 919 |
| BsnI | GGCC | 3 cut(s) | 803, 1797, 2078 |
| Bso31I | GGTCTC | 1 cut(s) | 571 |
| BsoBI | CYCGRG | 3 cut(s) | 327, 2208, 2254 |
| Bsp1286I | GDGCHC | 2 cut(s) | 110, 1838 |
| Bsp1407I | TGTACA | 1 cut(s) | 646 |
| Bsp19I | CCATGG | 1 cut(s) | 1377 |
| BspACI | CCGC | 9 cut(s) | 527, 563, 968, 1517, 1520, 1643, 1688, 2072, 2186 |
| BspANI | GGCC | 3 cut(s) | 803, 1797, 2078 |
| BspCNI | CTCAG | 3 cut(s) | 548, 1756, 2000 |
| BspFNI | CGCG | 1 cut(s) | 1635 |
| BspHI | TCATGA | 1 cut(s) | 1285 |
| BspLI | GGNNCC | 2 cut(s) | 580, 1692 |
| BspPI | GGATC | 6 cut(s) | 50, 1685, 1698, 1955, 2012, 2030 |
| BspTNI | GGTCTC | 1 cut(s) | 571 |
| BsrDI | GCAATG | 6 cut(s) | 44, 201, 500, 561, 1707, 2350 |
| BsrGI | TGTACA | 1 cut(s) | 646 |
| BssECI | CCNNGG | 2 cut(s) | 389, 1377 |
| BssSI | CACGAG | 1 cut(s) | 2154 |
| BssT1I | CCWWGG | 2 cut(s) | 389, 1377 |
| Bst2BI | CACGAG | 1 cut(s) | 2154 |
| Bst4CI | ACNGT | 1 cut(s) | 374 |
| Bst6I | CTCTTC | 3 cut(s) | 677, 1359, 2373 |
| BstAUI | TGTACA | 1 cut(s) | 646 |
| BstC8I | GCNNGC | 3 cut(s) | 1522, 1600, 1931 |
| BstDEI | CTNAG | 6 cut(s) | 535, 1005, 1041, 1263, 1764, 1987 |
| BstDSI | CCRYGG | 1 cut(s) | 1377 |
| BstFNI | CGCG | 1 cut(s) | 1635 |
| BstHHI | GCGC | 1 cut(s) | 493 |
| BstMAI | GTCTC | 2 cut(s) | 571, 1363 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 431, 560, 1259, 2194 |
| BstNSI | RCATGY | 2 cut(s) | 1040, 1376 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 576 |
| BstSCI | CCNGG | 1 cut(s) | 580 |
| BstUI | CGCG | 1 cut(s) | 1635 |
| BstV1I | GCAGC | 1 cut(s) | 1753 |
| BstV2I | GAAGAC | 1 cut(s) | 2310 |
| BstX2I | RGATCY | 3 cut(s) | 1690, 2017, 2035 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 706 |
| BstYI | RGATCY | 3 cut(s) | 1690, 2017, 2035 |
| BsuRI | GGCC | 3 cut(s) | 803, 1797, 2078 |
| BtgI | CCRYGG | 1 cut(s) | 1377 |
| BtsI | GCAGTG | 1 cut(s) | 973 |
| BtsIMutI | CAGTG | 1 cut(s) | 973 |
| Cac8I | GCNNGC | 3 cut(s) | 1522, 1600, 1931 |
| CciI | TCATGA | 1 cut(s) | 1285 |
| CfoI | GCGC | 1 cut(s) | 493 |
| Cfr13I | GGNCC | 1 cut(s) | 578 |
| CseI | GACGC | 1 cut(s) | 997 |
| Csp6I | GTAC | 6 cut(s) | 6, 647, 696, 771, 1079, 1230 |
| CviQI | GTAC | 6 cut(s) | 6, 647, 696, 771, 1079, 1230 |
| DdeI | CTNAG | 6 cut(s) | 535, 1005, 1041, 1263, 1764, 1987 |
| Eam1104I | CTCTTC | 3 cut(s) | 677, 1359, 2373 |
| EarI | CTCTTC | 3 cut(s) | 677, 1359, 2373 |
| EciI | GGCGGA | 1 cut(s) | 2175 |
| Eco130I | CCWWGG | 2 cut(s) | 389, 1377 |
| Eco24I | GRGCYC | 1 cut(s) | 110 |
| Eco31I | GGTCTC | 1 cut(s) | 571 |
| Eco32I | GATATC | 1 cut(s) | 1648 |
| Eco47I | GGWCC | 1 cut(s) | 578 |
| Eco57I | CTGAAG | 1 cut(s) | 1593 |
| Eco88I | CYCGRG | 3 cut(s) | 327, 2208, 2254 |
| EcoRV | GATATC | 1 cut(s) | 1648 |
| EcoT14I | CCWWGG | 2 cut(s) | 389, 1377 |
| EcoT22I | ATGCAT | 2 cut(s) | 203, 799 |
| EcoT38I | GRGCYC | 1 cut(s) | 110 |
| ErhI | CCWWGG | 2 cut(s) | 389, 1377 |
| FaqI | GGGAC | 2 cut(s) | 161, 564 |
| FauI | CCCGC | 1 cut(s) | 1513 |
| FauNDI | CATATG | 1 cut(s) | 1903 |
| FbaI | TGATCA | 1 cut(s) | 1282 |
| Fnu4HI | GCNGC | 4 cut(s) | 528, 969, 1518, 1742 |
| FriOI | GRGCYC | 1 cut(s) | 110 |
| Fsp4HI | GCNGC | 4 cut(s) | 528, 969, 1518, 1742 |
| FspI | TGCGCA | 1 cut(s) | 492 |
| GlaI | GCGC | 1 cut(s) | 492 |
| GluI | GCNGC | 4 cut(s) | 528, 969, 1518, 1742 |
| HaeIII | GGCC | 3 cut(s) | 803, 1797, 2078 |
| HapII | CCGG | 2 cut(s) | 59, 582 |
| HgaI | GACGC | 1 cut(s) | 997 |
| HhaI | GCGC | 1 cut(s) | 493 |
| Hin6I | GCGC | 1 cut(s) | 491 |
| HinP1I | GCGC | 1 cut(s) | 491 |
| HincII | GTYRAC | 1 cut(s) | 1357 |
| HindII | GTYRAC | 1 cut(s) | 1357 |
| HindIII | AAGCTT | 1 cut(s) | 675 |
| HpaII | CCGG | 2 cut(s) | 59, 582 |
| HphI | GGTGA | 4 cut(s) | 419, 1093, 1493, 1691 |
| Hpy166II | GTNNAC | 4 cut(s) | 298, 957, 1101, 1357 |
| Hpy188I | TCNGA | 8 cut(s) | 96, 538, 571, 721, 1225, 1363, 1990, 2290 |
| Hpy188III | TCNNGA | 9 cut(s) | 66, 150, 327, 1286, 1345, 1815, 2098, 2126, 2156 |
| Hpy8I | GTNNAC | 4 cut(s) | 298, 957, 1101, 1357 |
| HpyAV | CCTTC | 2 cut(s) | 2151, 2272 |
| HpyCH4III | ACNGT | 1 cut(s) | 374 |
| HpyCH4IV | ACGT | 1 cut(s) | 437 |
| HpyCH4V | TGCA | 9 cut(s) | 102, 201, 661, 797, 978, 1238, 1314, 1602, 1811 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 431, 560, 1259, 2194 |
| HpyF3I | CTNAG | 6 cut(s) | 535, 1005, 1041, 1263, 1764, 1987 |
| HpySE526I | ACGT | 1 cut(s) | 437 |
| HspAI | GCGC | 1 cut(s) | 491 |
| Ksp22I | TGATCA | 1 cut(s) | 1282 |
| LmnI | GCTCC | 2 cut(s) | 598, 1833 |
| LpnPI | CCDG | 7 cut(s) | 72, 79, 135, 372, 595, 1140, 1776 |
| Lsp1109I | GCAGC | 1 cut(s) | 1753 |
| LweI | GCATC | 8 cut(s) | 612, 648, 784, 806, 1078, 1602, 1630, 1820 |
| MaeII | ACGT | 1 cut(s) | 437 |
| MaeIII | GTNAC | 2 cut(s) | 1048, 1132 |
| MfeI | CAATTG | 2 cut(s) | 1652, 1965 |
| MflI | RGATCY | 3 cut(s) | 1690, 2017, 2035 |
| MhlI | GDGCHC | 2 cut(s) | 110, 1838 |
| MlyI | GAGTC | 6 cut(s) | 952, 1352, 1979, 2066, 2266, 2294 |
| MmeI | TCCRAC | 3 cut(s) | 594, 687, 927 |
| Mph1103I | ATGCAT | 2 cut(s) | 203, 799 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1119 |
| MseI | TTAA | 9 cut(s) | 213, 222, 744, 810, 1032, 1434, 1925, 1941, 2241 |
| MslI | CAYNNNNRTG | 4 cut(s) | 135, 293, 1284, 1816 |
| MspI | CCGG | 2 cut(s) | 59, 582 |
| MspR9I | CCNGG | 1 cut(s) | 582 |
| MunI | CAATTG | 2 cut(s) | 1652, 1965 |
| Mva1269I | GAATGC | 1 cut(s) | 919 |
| MvnI | CGCG | 1 cut(s) | 1635 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 431, 560, 1259, 2194 |
| NciI | CCSGG | 1 cut(s) | 582 |
| NcoI | CCATGG | 1 cut(s) | 1377 |
| NdeI | CATATG | 1 cut(s) | 1903 |
| NlaIV | GGNNCC | 2 cut(s) | 580, 1692 |
| NmuCI | GTSAC | 1 cut(s) | 1132 |
| NsbI | TGCGCA | 1 cut(s) | 492 |
| NsiI | ATGCAT | 2 cut(s) | 203, 799 |
| NspI | RCATGY | 2 cut(s) | 1040, 1376 |
| OliI | CACNNNNGTG | 1 cut(s) | 135 |
| PaeR7I | CTCGAG | 3 cut(s) | 327, 2208, 2254 |
| PagI | TCATGA | 1 cut(s) | 1285 |
| PctI | GAATGC | 1 cut(s) | 919 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1119 |
| PfeI | GAWTC | 6 cut(s) | 120, 1189, 1534, 1753, 1849, 2294 |
| PkrI | GCNGC | 4 cut(s) | 529, 970, 1519, 1743 |
| PleI | GAGTC | 6 cut(s) | 952, 1352, 1979, 2065, 2265, 2293 |
| PpsI | GAGTC | 6 cut(s) | 952, 1352, 1979, 2065, 2265, 2293 |
| PshAI | GACNNNNGTC | 1 cut(s) | 576 |
| PshBI | ATTAAT | 1 cut(s) | 2241 |
| PspN4I | GGNNCC | 2 cut(s) | 580, 1692 |
| PspPI | GGNCC | 1 cut(s) | 578 |
| PspXI | VCTCGAGB | 2 cut(s) | 2208, 2254 |
| PsuI | RGATCY | 3 cut(s) | 1690, 2017, 2035 |
| RsaI | GTAC | 6 cut(s) | 7, 648, 697, 772, 1080, 1231 |
| RsaNI | GTAC | 6 cut(s) | 6, 647, 696, 771, 1079, 1230 |
| RseI | CAYNNNNRTG | 4 cut(s) | 135, 293, 1284, 1816 |
| SaqAI | TTAA | 9 cut(s) | 213, 222, 744, 810, 1032, 1434, 1925, 1941, 2241 |
| SatI | GCNGC | 4 cut(s) | 528, 969, 1518, 1742 |
| Sau96I | GGNCC | 1 cut(s) | 578 |
| ScaI | AGTACT | 1 cut(s) | 7 |
| SchI | GAGTC | 6 cut(s) | 952, 1352, 1979, 2066, 2266, 2294 |
| ScrFI | CCNGG | 1 cut(s) | 582 |
| SduI | GDGCHC | 2 cut(s) | 110, 1838 |
| SfaNI | GCATC | 8 cut(s) | 612, 648, 784, 806, 1078, 1602, 1630, 1820 |
| Sfr274I | CTCGAG | 3 cut(s) | 327, 2208, 2254 |
| SinI | GGWCC | 1 cut(s) | 578 |
| SlaI | CTCGAG | 3 cut(s) | 327, 2208, 2254 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 135, 293, 1284, 1816 |
| SmlI | CTYRAG | 5 cut(s) | 327, 765, 1345, 2208, 2254 |
| SmoI | CTYRAG | 5 cut(s) | 327, 765, 1345, 2208, 2254 |
| SpeI | ACTAGT | 1 cut(s) | 8 |
| SsiI | CCGC | 9 cut(s) | 527, 563, 968, 1517, 1520, 1643, 1688, 2072, 2186 |
| SspI | AATATT | 1 cut(s) | 211 |
| StyD4I | CCNGG | 1 cut(s) | 580 |
| StyI | CCWWGG | 2 cut(s) | 389, 1377 |
| TaaI | ACNGT | 1 cut(s) | 374 |
| TaiI | ACGT | 1 cut(s) | 440 |
| TaqI | TCGA | 6 cut(s) | 264, 328, 891, 1756, 2209, 2255 |
| TatI | WGTACW | 2 cut(s) | 5, 646 |
| TauI | GCSGC | 3 cut(s) | 530, 971, 1520 |
| TfiI | GAWTC | 6 cut(s) | 120, 1189, 1534, 1753, 1849, 2294 |
| Tru1I | TTAA | 9 cut(s) | 213, 222, 744, 810, 1032, 1434, 1925, 1941, 2241 |
| Tru9I | TTAA | 9 cut(s) | 213, 222, 744, 810, 1032, 1434, 1925, 1941, 2241 |
| TscAI | CASTG | 1 cut(s) | 980 |
| TseFI | GTSAC | 1 cut(s) | 1132 |
| TseI | GCWGC | 1 cut(s) | 1741 |
| Tsp45I | GTSAC | 1 cut(s) | 1132 |
| TspGWI | ACGGA | 3 cut(s) | 1127, 1775, 2021 |
| TspRI | CASTG | 1 cut(s) | 980 |
| VpaK11BI | GGWCC | 1 cut(s) | 578 |
| VspI | ATTAAT | 1 cut(s) | 2241 |
| XapI | RAATTY | 3 cut(s) | 1116, 1302, 1621 |
| XceI | RCATGY | 2 cut(s) | 1040, 1376 |
| XhoI | CTCGAG | 3 cut(s) | 327, 2208, 2254 |
| XmaJI | CCTAGG | 1 cut(s) | 389 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1119 |
| ZrmI | AGTACT | 1 cut(s) | 7 |
| Zsp2I | ATGCAT | 2 cut(s) | 203, 799 |