Rh7CG313700

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002052
Physical Location & Seq
Forward (+)
33347556 .. 33348429
874 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG313700.1

Sequence Viewer

Length: 796 bp
ATGAAGCATAGAAGCAAATTGTGGTGGACTCCATGTGCGGCTCATTGCATTGACTTGATGTTGGAGGATATAAGCAAATTGAAGGTCTTTGAAACTACCATTCAAAGAGCTAAGCAAATTGTGAAGTTTATTTATGGGCACACACAAGTTCTTTCCATTATGAGAAAGTTCACCGAGAACAAGGAGATTATTCGTCCGGAGGTTACAAGGTTTGCCACATCTTTTCTCTCCCTTCAAAGTTTATATAAGCAAAAGGAAGCTCTCATTAAAATGTTTTCATCTAAAGATTGGAATGAATGTGGATGCACAAAACATAAAGATGCTAATGATGTGAGGAAGTGGATACTTTATGATGGAAGTTTTTGGAACCATGTTGCTTATTGCATAAAAAGTGTTCTACCACTTGTTTGTGTTTTGAGAGAGGTTGATTCGGAAGTGAGACCCGCTATGGGATTTATCTATGAGTTGATGGATGCCACAAAAGAAAAGATAGCTAAGAATCTTGGAAATGTGGAAGTAAAGTATGGTTCAATTTGGAGGAGAATAGATAATAGATGGAGTCCACAACTTCATCAACCATTGCATGCAGCGGGTTATTACTTGAACCCTCAATTTCGGTATGAAGAAAACTTTTCAAATACCGAGCATGTGAAGAAGGGTTTGGAAGAGTGCATGGATAGGATGCTAGGTGGTGAGGATCATATTAAAGTGGAGATACAATTAGACTTATATGAGCAAAAGCTCGGTAAGTTTGGAAGTGAAATGGCCTTATCTACTAGGAGGAAGCGATCACCCG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

265

Amino Acids

31.16

Weight (kDa)

9.11

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 1 - 40 4.3e-11 Domain of unknown function (DUF659)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 196
AciI CCGC 3 cut(s) 38, 444, 590
AclWI GGATC 1 cut(s) 705
AfiI CCNNNNNNNGG 1 cut(s) 449
AgsI TTSAA 7 cut(s) 82, 92, 104, 236, 531, 604, 636
AjuI GAANNNNNNNTTGG 2 cut(s) 644, 676
AluBI AGCT 4 cut(s) 110, 260, 494, 742
AluI AGCT 4 cut(s) 110, 260, 494, 742
Alw26I GTCTC 1 cut(s) 433
AlwI GGATC 1 cut(s) 705
Aor13HI TCCGGA 1 cut(s) 196
AoxI GGCC 1 cut(s) 765
ApeKI GCWGC 1 cut(s) 587
ArsI GACNNNNNNTTYG 2 cut(s) 69, 101
AsuHPI GGTGA 3 cut(s) 163, 704, 783
BaeGI GKGCMC 1 cut(s) 141
BbvI GCAGC 1 cut(s) 599
BccI CCATC 3 cut(s) 347, 463, 549
BciVI GTATCC 1 cut(s) 336
BcoDI GTCTC 1 cut(s) 433
BfaI CTAG 2 cut(s) 686, 777
BfuI GTATCC 1 cut(s) 336
BisI GCNGC 2 cut(s) 39, 588
BlpI GCTNAGC 1 cut(s) 111
BlsI GCNGC 2 cut(s) 40, 589
BmiI GGNNCC 1 cut(s) 368
BmsI GCATC 4 cut(s) 293, 310, 463, 672
Bpu1102I GCTNAGC 1 cut(s) 111
BsaI GGTCTC 1 cut(s) 433
BsaWI WCCGGW 1 cut(s) 196
Bsc4I CCNNNNNNNGG 1 cut(s) 449
Bse3DI GCAATG 2 cut(s) 43, 578
BseAI TCCGGA 1 cut(s) 196
BseGI GGATG 3 cut(s) 308, 478, 687
BseLI CCNNNNNNNGG 1 cut(s) 449
BseMI GCAATG 2 cut(s) 43, 578
BseRI GAGGAG 1 cut(s) 553
BseSI GKGCMC 1 cut(s) 141
BseXI GCAGC 1 cut(s) 599
BshFI GGCC 1 cut(s) 767
BsiSI CCGG 1 cut(s) 197
BslI CCNNNNNNNGG 1 cut(s) 449
BsmAI GTCTC 1 cut(s) 433
BsnI GGCC 1 cut(s) 767
Bso31I GGTCTC 1 cut(s) 433
Bsp1286I GDGCHC 1 cut(s) 141
Bsp13I TCCGGA 1 cut(s) 196
Bsp143I GATC 2 cut(s) 697, 788
Bsp1720I GCTNAGC 1 cut(s) 111
BspACI CCGC 3 cut(s) 38, 444, 590
BspANI GGCC 1 cut(s) 767
BspEI TCCGGA 1 cut(s) 196
BspLI GGNNCC 1 cut(s) 368
BspPI GGATC 1 cut(s) 705
BspTNI GGTCTC 1 cut(s) 433
BsrDI GCAATG 2 cut(s) 43, 578
BssMI GATC 2 cut(s) 697, 788
Bst6I CTCTTC 1 cut(s) 660
BstC8I GCNNGC 1 cut(s) 585
BstDEI CTNAG 2 cut(s) 111, 495
BstF5I GGATG 3 cut(s) 308, 478, 687
BstKTI GATC 2 cut(s) 700, 791
BstMAI GTCTC 1 cut(s) 433
BstMBI GATC 2 cut(s) 697, 788
BstNSI RCATGY 2 cut(s) 587, 650
BstSLI GKGCMC 1 cut(s) 141
BstV1I GCAGC 1 cut(s) 599
BsuI GTATCC 1 cut(s) 336
BsuRI GGCC 1 cut(s) 767
BtsCI GGATG 3 cut(s) 308, 478, 687
Cac8I GCNNGC 1 cut(s) 585
CviAII CATG 5 cut(s) 33, 371, 584, 647, 673
CviJI RGCY 6 cut(s) 41, 110, 260, 494, 742, 767
CviKI_1 RGCY 6 cut(s) 41, 110, 260, 494, 742, 767
DdeI CTNAG 2 cut(s) 111, 495
DpnI GATC 2 cut(s) 699, 790
DpnII GATC 2 cut(s) 697, 788
Eam1104I CTCTTC 1 cut(s) 660
EarI CTCTTC 1 cut(s) 660
Eco31I GGTCTC 1 cut(s) 433
FaeI CATG 5 cut(s) 36, 374, 587, 650, 676
FatI CATG 5 cut(s) 32, 370, 583, 646, 672
FauI CCCGC 2 cut(s) 451, 583
Fnu4HI GCNGC 2 cut(s) 39, 588
FokI GGATG 3 cut(s) 315, 485, 694
Fsp4HI GCNGC 2 cut(s) 39, 588
FspBI CTAG 2 cut(s) 686, 777
GluI GCNGC 2 cut(s) 39, 588
HaeIII GGCC 1 cut(s) 767
HapII CCGG 1 cut(s) 197
Hin1II CATG 5 cut(s) 36, 374, 587, 650, 676
HinfI GANTC 4 cut(s) 28, 428, 499, 559
HpaII CCGG 1 cut(s) 197
HphI GGTGA 3 cut(s) 163, 704, 783
Hpy166II GTNNAC 3 cut(s) 27, 171, 563
Hpy188I TCNGA 1 cut(s) 433
Hpy188III TCNNGA 1 cut(s) 197
Hpy8I GTNNAC 3 cut(s) 27, 171, 563
HpyAV CCTTC 3 cut(s) 76, 242, 649
HpyCH4V TGCA 6 cut(s) 48, 306, 384, 583, 587, 672
HpyF3I CTNAG 2 cut(s) 111, 495
Hsp92II CATG 5 cut(s) 36, 374, 587, 650, 676
Kpn2I TCCGGA 1 cut(s) 196
Kzo9I GATC 2 cut(s) 697, 788
LpnPI CCDG 1 cut(s) 210
Lsp1109I GCAGC 1 cut(s) 599
LweI GCATC 4 cut(s) 293, 310, 463, 672
MaeI CTAG 2 cut(s) 686, 777
MaeIII GTNAC 1 cut(s) 202
MalI GATC 2 cut(s) 699, 790
MboI GATC 2 cut(s) 697, 788
MboII GAAGA 3 cut(s) 635, 664, 677
MhlI GDGCHC 1 cut(s) 141
MluCI AATT 6 cut(s) 17, 77, 117, 531, 611, 719
MlyI GAGTC 2 cut(s) 22, 568
MmeI TCCRAC 1 cut(s) 42
MnlI CCTC 8 cut(s) 58, 193, 327, 415, 531, 618, 688, 774
MroI TCCGGA 1 cut(s) 196
MseI TTAA 2 cut(s) 267, 705
MslI CAYNNNNRTG 2 cut(s) 269, 318
MspA1I CMGCKG 1 cut(s) 590
MspI CCGG 1 cut(s) 197
NdeII GATC 2 cut(s) 697, 788
NlaIII CATG 5 cut(s) 36, 374, 587, 650, 676
NlaIV GGNNCC 1 cut(s) 368
NspI RCATGY 2 cut(s) 587, 650
PaeI GCATGC 1 cut(s) 587
PfeI GAWTC 2 cut(s) 428, 499
PkrI GCNGC 2 cut(s) 40, 589
PleI GAGTC 2 cut(s) 22, 567
PpsI GAGTC 2 cut(s) 22, 567
PspN4I GGNNCC 1 cut(s) 368
RseI CAYNNNNRTG 2 cut(s) 269, 318
SaqAI TTAA 2 cut(s) 267, 705
SatI GCNGC 2 cut(s) 39, 588
Sau3AI GATC 2 cut(s) 697, 788
SchI GAGTC 2 cut(s) 22, 568
SduI GDGCHC 1 cut(s) 141
SetI ASST 9 cut(s) 87, 112, 204, 212, 262, 426, 496, 691, 744
SfaNI GCATC 4 cut(s) 293, 310, 463, 672
SmiMI CAYNNNNRTG 2 cut(s) 269, 318
SphI GCATGC 1 cut(s) 587
Sse9I AATT 6 cut(s) 17, 77, 117, 531, 611, 719
SsiI CCGC 3 cut(s) 38, 444, 590
SspMI CTAG 2 cut(s) 686, 777
TasI AATT 6 cut(s) 17, 77, 117, 531, 611, 719
TauI GCSGC 1 cut(s) 41
TfiI GAWTC 2 cut(s) 428, 499
Tru1I TTAA 2 cut(s) 267, 705
Tru9I TTAA 2 cut(s) 267, 705
TseI GCWGC 1 cut(s) 587
TspDTI ATGAA 5 cut(s) 17, 267, 309, 560, 636
XceI RCATGY 2 cut(s) 587, 650
XspI CTAG 2 cut(s) 686, 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.