MD04G1233200.v1.1

cellular response to molecule of fungal origin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000953
Physical Location & Seq
Forward (+)
31220105 .. 31222969
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1233200.v1.1.491

Sequence Viewer

Length: 1908 bp
ATGAATACCGATAGCCTGCTCCTCCGGCCTCTGTTTTTCTTGCTTGTAATTTTCTTCGCCACGGCCATTAATGTTGTACCAAGCCAAGCTGCAGCCGATGATCATGGCGCTGACTGCCCAATTTCACGGTGTAGGCATGATGGTCCCGTTATCAAGTTTCCCTTTCGCCTACAAGACGATCCCCGACACTGTGGCCATCCAGATTTTGAGGTTTCTTGCTTGGAAAACAAGACAATGATTCAGCTCTCATCGTCATCAGGACTGTTTGCCATACAAACAATAGATTACGAAGCGCAACAGTTTCGCGTCTACGATGCGAACGGTTGCCTCCCCAGACGCCTTCTTAACTTTACCCTCCCCATCGACTCATCACAGCTCTTTCATATCTCCGATTATTTCCCGTCCTATACTTCAACGCGTACCACACTGATAGAAAACGTTACATTATTAAACTGTTCCACAGATCAAAACTTTACCACAATCTTCAATGAGCACTACTTTCCAATCAGCTGTCTCAGTGTCCCAGGGCACCAAGTTCTGGCTTTTCCACCCTCAGCTTCTGTCAAGGATTTGCCTGTGCCAACTTGTAGCACTTGGAGAGAACTCTCTCTTCCGTTACGAAATCTGGATCCTATTAACAGTAAGTGTAAAGTGGACAGTTTTTTGTGGCTGGAATGGTATTCCTGGAATTTCCCATCATGCCAAAACTGTGGACGAGGTTGCTTTCTCAGTGACAGCAGCAATCAATTGGAGTGCTATCCTTCGCAACAGCGAAAAGGCCATGTATCAAGTAGGAGGTCGATTATCTGGGGAGCGAGCGTAGCTTCATTTGCTCTTATATCAGCGGTGGCAGCAGTAGTATTTTTTTTCCATGTAAAACGATCAAAGAGCATACAGGAAAAAGAGAATCAACTCAAAGTTGAAAGGTTCCTAAAGGATCACAAATCTCACGTACCAACAAGATACTCCTACGCCGATATTAAAAAGATGACAAATGGATTCAAGAAAAAGTTAGGTGAAGGAGGTTTCGGAAGTGTTTACAGTGGAGAGCTTCCGATTAATGGAGTTCCAGTCGCCGTAAAAGTCCTCAGTGACTCGAAAGGAAATGGAGAAGATTTTGTTAATGAAGTGGGAACCATTGGCAGAATTCATCATGTCAATGTGGTTCGTCTACTAGGGTTTTCTGCCGAAGTAGGCAAACGTGCGCTTCTTTACGAGCTCATGCCAAACAGGTCCCTAGAGAACTTCATCACATCTAAAGATCAATCCAATAACACTTTGTTTGATTGGCAGAAACTTCATAACATCGTCAATGGTATAGCGAAGGGAATCGAGTATCTTCACCAAGGGTGCGACCGCATGATCCTCCACTTCGATATCAAGCCTCATAACATACTGTTAGACCATGATTTCAATCCTAAGATCTCAGATTTTGGTCTGGCTAAACTCTGTTCCAAAGAAGACAGTATCATATCTATGACAGCTGCTAGAGGCACCGTGGGCTACATTGCACCAGAAGTGTTTAACGGGAACTTCGGGAGCGTGTCACACAAGTCCGATGTGTACAGTTTCGGGATGCTGGTGCTTGAGATTGTTGGAGCTAGGAAGGAGGAGACTTCTCTTGCTTCTGGCAACAATGAGGTCTACTTTCCAGAATTGGTTTACAATCGTCTCGTTCAAGGAGAAGCGTTGGATTTGAAGCTAGATACCGATGAGGACACTCAAATTGCTAAGAAACTAGTGATTGTGGCACTTTGGTGCATCCAGTGGTACCCGGTGAATCGCCCTTCCATGAAAGCAGTTGTTAGAATGCTAGAAGGAGGCTCTGAAAACTTGAGCATGCCGCCAAATCCATTTGCCTCCACAAGTGCACAGACAGATCAACCAAGAACAACACTGTCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000166 GO:0000187 GO:0000302 GO:0001568 GO:0001772 GO:0001775 GO:0001784 GO:0001817 GO:0001819 GO:0001820 GO:0001932 GO:0001934 GO:0001944 GO:0001945 GO:0001959 GO:0002090 GO:0002092 GO:0002218 GO:0002220 GO:0002223 GO:0002238 GO:0002250 GO:0002252 GO:0002253 GO:0002263 GO:0002274 GO:0002275 GO:0002281 GO:0002283 GO:0002351 GO:0002366 GO:0002376 GO:0002429 GO:0002431 GO:0002433 GO:0002442 GO:0002520 GO:0002521 GO:0002532 GO:0002554 GO:0002576 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002703 GO:0002705 GO:0002757 GO:0002758 GO:0002764 GO:0002768 GO:0002791 GO:0002793 GO:0002886 GO:0002888 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0004715 GO:0005102 GO:0005178 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006355 GO:0006464 GO:0006468 GO:0006606 GO:0006690 GO:0006691 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006836 GO:0006837 GO:0006886 GO:0006887 GO:0006897 GO:0006898 GO:0006909 GO:0006913 GO:0006928 GO:0006935 GO:0006950 GO:0006952 GO:0006954 GO:0006955 GO:0006979 GO:0007154 GO:0007155 GO:0007159 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007186 GO:0007229 GO:0007254 GO:0007257 GO:0007275 GO:0007596 GO:0007599 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008283 GO:0008284 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009636 GO:0009653 GO:0009719 GO:0009887 GO:0009889 GO:0009891 GO:0009893 GO:0009898 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010243 GO:0010468 GO:0010543 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0010803 GO:0015031 GO:0015696 GO:0015833 GO:0015844 GO:0015850 GO:0016020 GO:0016053 GO:0016192 GO:0016301 GO:0016310 GO:0016477 GO:0016740 GO:0016772 GO:0016773 GO:0017038 GO:0017076 GO:0017157 GO:0018105 GO:0018108 GO:0018193 GO:0018209 GO:0018212 GO:0019219 GO:0019220 GO:0019221 GO:0019222 GO:0019370 GO:0019538 GO:0019752 GO:0019814 GO:0019815 GO:0019897 GO:0019898 GO:0019899 GO:0019900 GO:0019901 GO:0019902 GO:0019904 GO:0022407 GO:0022409 GO:0022610 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030054 GO:0030097 GO:0030098 GO:0030100 GO:0030139 GO:0030154 GO:0030155 GO:0030168 GO:0030193 GO:0030217 GO:0030554 GO:0030593 GO:0030595 GO:0031098 GO:0031234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031399 GO:0031401 GO:0031410 GO:0031623 GO:0031625 GO:0031952 GO:0031954 GO:0031982 GO:0032009 GO:0032101 GO:0032147 GO:0032268 GO:0032270 GO:0032303 GO:0032368 GO:0032386 GO:0032388 GO:0032479 GO:0032481 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032645 GO:0032672 GO:0032673 GO:0032725 GO:0032752 GO:0032753 GO:0032872 GO:0032874 GO:0032879 GO:0032880 GO:0032890 GO:0032928 GO:0032940 GO:0032944 GO:0032946 GO:0032991 GO:0033003 GO:0033005 GO:0033006 GO:0033008 GO:0033036 GO:0033077 GO:0033365 GO:0033554 GO:0033628 GO:0033630 GO:0033674 GO:0034097 GO:0034103 GO:0034105 GO:0034110 GO:0034504 GO:0034599 GO:0034613 GO:0034614 GO:0035239 GO:0035295 GO:0035325 GO:0035556 GO:0035639 GO:0035690 GO:0036094 GO:0036211 GO:0036230 GO:0038063 GO:0038065 GO:0038083 GO:0038093 GO:0038094 GO:0038095 GO:0038096 GO:0038110 GO:0038156 GO:0040011 GO:0042035 GO:0042060 GO:0042101 GO:0042102 GO:0042108 GO:0042110 GO:0042113 GO:0042116 GO:0042119 GO:0042127 GO:0042129 GO:0042169 GO:0042221 GO:0042325 GO:0042327 GO:0042330 GO:0042493 GO:0042542 GO:0042742 GO:0042886 GO:0043085 GO:0043112 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043235 GO:0043269 GO:0043300 GO:0043302 GO:0043304 GO:0043306 GO:0043313 GO:0043366 GO:0043368 GO:0043383 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043436 GO:0043506 GO:0043507 GO:0043549 GO:0044070 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044389 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044877 GO:0045055 GO:0045058 GO:0045059 GO:0045060 GO:0045061 GO:0045087 GO:0045088 GO:0045089 GO:0045124 GO:0045184 GO:0045309 GO:0045321 GO:0045335 GO:0045399 GO:0045401 GO:0045423 GO:0045425 GO:0045577 GO:0045579 GO:0045580 GO:0045582 GO:0045586 GO:0045588 GO:0045595 GO:0045597 GO:0045619 GO:0045621 GO:0045780 GO:0045785 GO:0045807 GO:0045859 GO:0045860 GO:0045921 GO:0045937 GO:0046328 GO:0046330 GO:0046394 GO:0046456 GO:0046631 GO:0046632 GO:0046634 GO:0046635 GO:0046637 GO:0046638 GO:0046640 GO:0046641 GO:0046643 GO:0046645 GO:0046649 GO:0046677 GO:0046777 GO:0046850 GO:0046852 GO:0046903 GO:0046907 GO:0048259 GO:0048260 GO:0048513 GO:0048514 GO:0048518 GO:0048522 GO:0048534 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050670 GO:0050671 GO:0050707 GO:0050708 GO:0050714 GO:0050715 GO:0050730 GO:0050731 GO:0050764 GO:0050776 GO:0050778 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050817 GO:0050818 GO:0050839 GO:0050848 GO:0050850 GO:0050851 GO:0050852 GO:0050853 GO:0050863 GO:0050864 GO:0050865 GO:0050867 GO:0050870 GO:0050871 GO:0050878 GO:0050896 GO:0050900 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051090 GO:0051094 GO:0051128 GO:0051130 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051219 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051249 GO:0051251 GO:0051252 GO:0051338 GO:0051347 GO:0051403 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051707 GO:0051716 GO:0055094 GO:0060255 GO:0060326 GO:0060341 GO:0060627 GO:0060759 GO:0061041 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070301 GO:0070302 GO:0070304 GO:0070372 GO:0070486 GO:0070489 GO:0070663 GO:0070665 GO:0070669 GO:0070727 GO:0070887 GO:0071216 GO:0071226 GO:0071236 GO:0071310 GO:0071345 GO:0071352 GO:0071402 GO:0071404 GO:0071593 GO:0071621 GO:0071702 GO:0071704 GO:0071705 GO:0071900 GO:0071902 GO:0071944 GO:0072358 GO:0072359 GO:0072594 GO:0072676 GO:0072678 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0090237 GO:0090322 GO:0090330 GO:0097159 GO:0097237 GO:0097367 GO:0097529 GO:0097530 GO:0097708 GO:0098542 GO:0098552 GO:0098562 GO:0098609 GO:0098657 GO:0098796 GO:0098797 GO:0098802 GO:0140029 GO:0140096 GO:1900046 GO:1900084 GO:1900086 GO:1901265 GO:1901363 GO:1901564 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901700 GO:1901701 GO:1902105 GO:1902107 GO:1902531 GO:1902533 GO:1902563 GO:1903034 GO:1903037 GO:1903039 GO:1903305 GO:1903307 GO:1903506 GO:1903530 GO:1903532 GO:1903706 GO:1903708 GO:1904951 GO:1905952 GO:1990266 GO:2000026 GO:2000112 GO:2000191 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04014 ko04064 ko04072 ko04151 ko04380 ko04611 ko04650 ko04658 ko04659 ko04660 ko04662 ko04664 ko04666 ko05152 ko05167 ko05169 ko05203 ko05340 map04014 map04064 map04072 map04151 map04380 map04611 map04650 map04658 map04659 map04660 map04662 map04664 map04666 map05152 map05167 map05169 map05203 map05340
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase Pkinase_Tyr SH2 S_locus_glycop

Protein Analysis

636

Amino Acids

71.05

Weight (kDa)

6.68

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 39 - 105 6.8e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 334 - 605 1.6e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 335 - 603 1.7e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1770
AccB1I GGYRCC 3 cut(s) 528, 1493, 1770
AccB7I CCANNNNNTGG 1 cut(s) 538
AccI GTMKAC 3 cut(s) 309, 1171, 1644
AccII CGCG 2 cut(s) 306, 418
AciI CCGC 3 cut(s) 845, 1357, 1844
AclI AACGTT 1 cut(s) 438
AclWI GGATC 5 cut(s) 173, 623, 636, 945, 1357
AcoI YGGCCR 2 cut(s) 63, 193
AcsI RAATTY 2 cut(s) 688, 1146
AcyI GRCGYC 1 cut(s) 337
AfaI GTAC 5 cut(s) 78, 421, 954, 1565, 1772
AfiI CCNNNNNNNGG 2 cut(s) 538, 1061
AflIII ACRYGT 1 cut(s) 416
AgsI TTSAA 7 cut(s) 414, 487, 923, 1003, 1414, 1679, 1699
AhlI ACTAGT 1 cut(s) 1738
AjnI CCWGG 2 cut(s) 523, 683
AleI CACNNNNGTG 1 cut(s) 1756
Alw21I GWGCWC 3 cut(s) 495, 1221, 1873
Alw26I GTCTC 3 cut(s) 518, 1607, 1676
Alw44I GTGCAC 1 cut(s) 1869
AlwI GGATC 5 cut(s) 173, 623, 636, 945, 1357
AlwNI CAGNNNCTG 1 cut(s) 560
AoxI GGCC 4 cut(s) 26, 63, 193, 778
ApaLI GTGCAC 1 cut(s) 1869
ApeKI GCWGC 5 cut(s) 89, 92, 738, 851, 1484
ApoI RAATTY 2 cut(s) 688, 1146
AseI ATTAAT 2 cut(s) 69, 1059
Asp718I GGTACC 1 cut(s) 1770
AspLEI GCGC 3 cut(s) 110, 295, 1207
AspS9I GGNCC 2 cut(s) 143, 1233
AsuC2I CCSGG 1 cut(s) 1775
AsuHPI GGTGA 3 cut(s) 1028, 1334, 1789
AvaII GGWCC 2 cut(s) 143, 1233
BaeGI GKGCMC 2 cut(s) 531, 1873
BalI TGGCCA 1 cut(s) 195
BamHI GGATCC 1 cut(s) 628
BanI GGYRCC 3 cut(s) 528, 1493, 1770
BanII GRGCYC 1 cut(s) 1221
BbsI GAAGAC 1 cut(s) 1467
Bbv12I GWGCWC 3 cut(s) 495, 1221, 1873
BbvCI CCTCAGC 1 cut(s) 553
BbvI GCAGC 5 cut(s) 76, 104, 750, 863, 1471
BccI CCATC 4 cut(s) 134, 204, 368, 703
BceAI ACGGC 2 cut(s) 78, 1061
BcgI CGANNNNNNTGC 2 cut(s) 284, 318
BciT130I CCWGG 2 cut(s) 525, 685
BclI TGATCA 1 cut(s) 100
BcnI CCSGG 1 cut(s) 1775
BcoDI GTCTC 3 cut(s) 518, 1607, 1676
BcuI ACTAGT 1 cut(s) 1738
BfaI CTAG 7 cut(s) 1175, 1238, 1488, 1602, 1703, 1739, 1814
BfmI CTRYAG 1 cut(s) 90
BfoI RGCGCY 1 cut(s) 111
BglII AGATCT 1 cut(s) 1422
BisI GCNGC 6 cut(s) 90, 93, 739, 852, 1485, 1844
BlsI GCNGC 6 cut(s) 91, 94, 740, 853, 1486, 1845
Bme1390I CCNGG 3 cut(s) 525, 685, 1775
Bme18I GGWCC 2 cut(s) 143, 1233
BmgT120I GGNCC 2 cut(s) 143, 1233
BmiI GGNNCC 8 cut(s) 145, 530, 630, 929, 1135, 1235, 1495, 1772
BmrFI CCNGG 3 cut(s) 525, 685, 1775
BmsI GCATC 3 cut(s) 304, 1566, 1770
BpiI GAAGAC 1 cut(s) 1467
Bpu10I CCTNAGC 1 cut(s) 553
BpuEI CTTGAG 2 cut(s) 1607, 1855
BpuMI CCSGG 1 cut(s) 1775
BsaAI YACGTR 1 cut(s) 952
BsaBI GATNNNNATC 1 cut(s) 1413
BsaHI GRCGYC 1 cut(s) 337
BsaJI CCNNGG 5 cut(s) 60, 523, 524, 1345, 1497
BsaXI ACNNNNNCTCC 4 cut(s) 804, 834, 1056, 1086
Bsc4I CCNNNNNNNGG 2 cut(s) 538, 1061
Bse1I ACTGG 2 cut(s) 1070, 1765
Bse3DI GCAATG 1 cut(s) 1506
Bse8I GATNNNNATC 1 cut(s) 1413
BseBI CCWGG 2 cut(s) 525, 685
BseDI CCNNGG 5 cut(s) 60, 523, 524, 1345, 1497
BseGI GGATG 3 cut(s) 196, 1581, 1761
BseJI GATNNNNATC 1 cut(s) 1413
BseLI CCNNNNNNNGG 2 cut(s) 538, 1061
BseMI GCAATG 1 cut(s) 1506
BseMII CTCAG 5 cut(s) 529, 567, 742, 1102, 1440
BseNI ACTGG 2 cut(s) 1070, 1765
BseRI GAGGAG 2 cut(s) 11, 1625
BseSI GKGCMC 2 cut(s) 531, 1873
BseXI GCAGC 5 cut(s) 76, 104, 750, 863, 1471
Bsh1236I CGCG 2 cut(s) 306, 418
Bsh1285I CGRYCG 1 cut(s) 1357
BshFI GGCC 4 cut(s) 28, 65, 195, 780
BshNI GGYRCC 3 cut(s) 528, 1493, 1770
BsiEI CGRYCG 1 cut(s) 1357
BsiHKAI GWGCWC 3 cut(s) 495, 1221, 1873
BsiSI CCGG 2 cut(s) 25, 1775
BslFI GGGAC 3 cut(s) 129, 506, 1219
BslI CCNNNNNNNGG 2 cut(s) 538, 1061
BsmAI GTCTC 3 cut(s) 518, 1607, 1676
BsmBI CGTCTC 1 cut(s) 1676
BsmFI GGGAC 3 cut(s) 129, 506, 1219
BsmI GAATGC 1 cut(s) 1815
BsnI GGCC 4 cut(s) 28, 65, 195, 780
Bsp1286I GDGCHC 4 cut(s) 495, 531, 1221, 1873
Bsp1407I TGTACA 1 cut(s) 1563
BspACI CCGC 3 cut(s) 845, 1357, 1844
BspANI GGCC 4 cut(s) 28, 65, 195, 780
BspCNI CTCAG 5 cut(s) 528, 566, 741, 1101, 1439
BspFNI CGCG 2 cut(s) 306, 418
BspLI GGNNCC 8 cut(s) 145, 530, 630, 929, 1135, 1235, 1495, 1772
BspMAI CTGCAG 1 cut(s) 94
BspPI GGATC 5 cut(s) 173, 623, 636, 945, 1357
BspT107I GGYRCC 3 cut(s) 528, 1493, 1770
BsrDI GCAATG 1 cut(s) 1506
BsrGI TGTACA 1 cut(s) 1563
BsrI ACTGG 2 cut(s) 1070, 1765
BssECI CCNNGG 5 cut(s) 60, 523, 524, 1345, 1497
BssNI GRCGYC 1 cut(s) 337
BssT1I CCWWGG 1 cut(s) 1345
Bst2UI CCWGG 2 cut(s) 525, 685
Bst6I CTCTTC 1 cut(s) 615
BstACI GRCGYC 1 cut(s) 337
BstAUI TGTACA 1 cut(s) 1563
BstBAI YACGTR 1 cut(s) 952
BstC8I GCNNGC 3 cut(s) 17, 817, 1841
BstDEI CTNAG 7 cut(s) 515, 553, 728, 1088, 1419, 1426, 1731
BstDSI CCRYGG 2 cut(s) 60, 1497
BstF5I GGATG 3 cut(s) 196, 1581, 1761
BstFNI CGCG 2 cut(s) 306, 418
BstH2I RGCGCY 1 cut(s) 111
BstHHI GCGC 3 cut(s) 110, 295, 1207
BstMAI GTCTC 3 cut(s) 518, 1607, 1676
BstMCI CGRYCG 1 cut(s) 1357
BstMWI GCNNNNNNNGC 6 cut(s) 25, 114, 821, 830, 851, 1500
BstNI CCWGG 2 cut(s) 525, 685
BstNSI RCATGY 1 cut(s) 1843
BstSCI CCNGG 3 cut(s) 523, 683, 1773
BstSFI CTRYAG 1 cut(s) 90
BstSLI GKGCMC 2 cut(s) 531, 1873
BstUI CGCG 2 cut(s) 306, 418
BstV1I GCAGC 5 cut(s) 76, 104, 750, 863, 1471
BstV2I GAAGAC 1 cut(s) 1467
BstX2I RGATCY 2 cut(s) 628, 1422
BstXI CCANNNNNNTGG 1 cut(s) 710
BstYI RGATCY 2 cut(s) 628, 1422
BsuRI GGCC 4 cut(s) 28, 65, 195, 780
BtgI CCRYGG 2 cut(s) 60, 1497
BtsCI GGATG 3 cut(s) 196, 1581, 1761
BtsIMutI CAGTG 8 cut(s) 187, 425, 523, 736, 1048, 1096, 1772, 1895
Cac8I GCNNGC 3 cut(s) 17, 817, 1841
CaiI CAGNNNCTG 1 cut(s) 560
CfoI GCGC 3 cut(s) 110, 295, 1207
Cfr13I GGNCC 2 cut(s) 143, 1233
CseI GACGC 2 cut(s) 295, 345
Csp6I GTAC 5 cut(s) 77, 420, 953, 1564, 1771
CviQI GTAC 5 cut(s) 77, 420, 953, 1564, 1771
DdeI CTNAG 7 cut(s) 515, 553, 728, 1088, 1419, 1426, 1731
EaeI YGGCCR 2 cut(s) 63, 193
Eam1104I CTCTTC 1 cut(s) 615
EarI CTCTTC 1 cut(s) 615
Ecl136II GAGCTC 1 cut(s) 1219
Eco130I CCWWGG 1 cut(s) 1345
Eco24I GRGCYC 1 cut(s) 1221
Eco32I GATATC 1 cut(s) 1378
Eco47I GGWCC 2 cut(s) 143, 1233
Eco53kI GAGCTC 1 cut(s) 1219
EcoICRI GAGCTC 1 cut(s) 1219
EcoO109I RGGNCCY 1 cut(s) 1233
EcoRI GAATTC 1 cut(s) 1146
EcoRII CCWGG 2 cut(s) 523, 683
EcoRV GATATC 1 cut(s) 1378
EcoT14I CCWWGG 1 cut(s) 1345
EcoT38I GRGCYC 1 cut(s) 1221
ErhI CCWWGG 1 cut(s) 1345
Esp3I CGTCTC 1 cut(s) 1676
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FaqI GGGAC 3 cut(s) 129, 506, 1219
FbaI TGATCA 1 cut(s) 100
FblI GTMKAC 3 cut(s) 309, 1171, 1644
Fnu4HI GCNGC 6 cut(s) 90, 93, 739, 852, 1485, 1844
FokI GGATG 3 cut(s) 183, 1588, 1748
FriOI GRGCYC 1 cut(s) 1221
Fsp4HI GCNGC 6 cut(s) 90, 93, 739, 852, 1485, 1844
FspBI CTAG 7 cut(s) 1175, 1238, 1488, 1602, 1703, 1739, 1814
GlaI GCGC 3 cut(s) 109, 294, 1206
GluI GCNGC 6 cut(s) 90, 93, 739, 852, 1485, 1844
HaeII RGCGCY 1 cut(s) 111
HaeIII GGCC 4 cut(s) 28, 65, 195, 780
HapII CCGG 2 cut(s) 25, 1775
HgaI GACGC 2 cut(s) 295, 345
HhaI GCGC 3 cut(s) 110, 295, 1207
Hin1I GRCGYC 1 cut(s) 337
Hin6I GCGC 3 cut(s) 108, 293, 1205
HinP1I GCGC 3 cut(s) 108, 293, 1205
HinfI GANTC 7 cut(s) 238, 365, 907, 999, 1094, 1329, 1780
HpaII CCGG 2 cut(s) 25, 1775
HphI GGTGA 3 cut(s) 1028, 1334, 1789
Hpy166II GTNNAC 9 cut(s) 310, 655, 713, 1039, 1172, 1564, 1645, 1663, 1871
Hpy188I TCNGA 6 cut(s) 391, 1031, 1056, 1429, 1558, 1828
Hpy188III TCNNGA 7 cut(s) 200, 258, 626, 1003, 1537, 1573, 1652
Hpy8I GTNNAC 9 cut(s) 310, 655, 713, 1039, 1172, 1564, 1645, 1663, 1871
HpyAV CCTTC 7 cut(s) 350, 771, 1013, 1318, 1600, 1797, 1811
HpyCH4IV ACGT 3 cut(s) 438, 951, 1201
HpyCH4V TGCA 4 cut(s) 92, 1511, 1761, 1871
HpyF10VI GCNNNNNNNGC 6 cut(s) 25, 114, 821, 830, 851, 1500
HpyF3I CTNAG 7 cut(s) 515, 553, 728, 1088, 1419, 1426, 1731
HpySE526I ACGT 3 cut(s) 438, 951, 1201
Hsp92I GRCGYC 1 cut(s) 337
HspAI GCGC 3 cut(s) 108, 293, 1205
KpnI GGTACC 1 cut(s) 1774
Ksp22I TGATCA 1 cut(s) 100
LmnI GCTCC 4 cut(s) 24, 812, 1539, 1598
Lsp1109I GCAGC 5 cut(s) 76, 104, 750, 863, 1471
LweI GCATC 3 cut(s) 304, 1566, 1770
MaeI CTAG 7 cut(s) 1175, 1238, 1488, 1602, 1703, 1739, 1814
MaeII ACGT 3 cut(s) 438, 951, 1201
MaeIII GTNAC 5 cut(s) 439, 615, 731, 1091, 1545
MboII GAAGA 6 cut(s) 46, 475, 602, 1124, 1331, 1472
MfeI CAATTG 1 cut(s) 746
MflI RGATCY 2 cut(s) 628, 1422
MhlI GDGCHC 4 cut(s) 495, 531, 1221, 1873
MlsI TGGCCA 1 cut(s) 195
MluCI AATT 7 cut(s) 48, 120, 688, 746, 1146, 1655, 1725
MluI ACGCGT 1 cut(s) 416
MluNI TGGCCA 1 cut(s) 195
MlyI GAGTC 2 cut(s) 359, 1088
MmeI TCCRAC 2 cut(s) 1576, 1671
Mox20I TGGCCA 1 cut(s) 195
MscI TGGCCA 1 cut(s) 195
MseI TTAA 9 cut(s) 69, 345, 449, 636, 981, 1059, 1122, 1524, 1906
MslI CAYNNNNRTG 3 cut(s) 1158, 1475, 1756
Msp20I TGGCCA 1 cut(s) 195
MspA1I CMGCKG 3 cut(s) 510, 845, 1484
MspI CCGG 2 cut(s) 25, 1775
MspR9I CCNGG 3 cut(s) 525, 685, 1775
MunI CAATTG 1 cut(s) 746
Mva1269I GAATGC 1 cut(s) 1815
MvaI CCWGG 2 cut(s) 525, 685
MvnI CGCG 2 cut(s) 306, 418
MwoI GCNNNNNNNGC 6 cut(s) 25, 114, 821, 830, 851, 1500
NciI CCSGG 1 cut(s) 1775
NlaIV GGNNCC 8 cut(s) 145, 530, 630, 929, 1135, 1235, 1495, 1772
NmuCI GTSAC 3 cut(s) 731, 1091, 1545
NspI RCATGY 1 cut(s) 1843
OliI CACNNNNGTG 1 cut(s) 1756
PaeI GCATGC 1 cut(s) 1843
PasI CCCWGGG 1 cut(s) 524
PctI GAATGC 1 cut(s) 1815
PfeI GAWTC 5 cut(s) 238, 907, 999, 1329, 1780
PflMI CCANNNNNTGG 1 cut(s) 538
PfoI TCCNGGA 1 cut(s) 683
PkrI GCNGC 6 cut(s) 91, 94, 740, 853, 1486, 1845
PleI GAGTC 2 cut(s) 359, 1088
PpsI GAGTC 2 cut(s) 359, 1088
Ppu21I YACGTR 1 cut(s) 952
PpuMI RGGWCCY 1 cut(s) 1233
PshBI ATTAAT 2 cut(s) 69, 1059
Psp124BI GAGCTC 1 cut(s) 1221
Psp1406I AACGTT 1 cut(s) 438
Psp5II RGGWCCY 1 cut(s) 1233
Psp6I CCWGG 2 cut(s) 523, 683
PspGI CCWGG 2 cut(s) 523, 683
PspN4I GGNNCC 8 cut(s) 145, 530, 630, 929, 1135, 1235, 1495, 1772
PspPI GGNCC 2 cut(s) 143, 1233
PspPPI RGGWCCY 1 cut(s) 1233
PstI CTGCAG 1 cut(s) 94
PstNI CAGNNNCTG 1 cut(s) 560
PsuI RGATCY 2 cut(s) 628, 1422
PvuII CAGCTG 2 cut(s) 510, 1484
RsaI GTAC 5 cut(s) 78, 421, 954, 1565, 1772
RsaNI GTAC 5 cut(s) 77, 420, 953, 1564, 1771
RseI CAYNNNNRTG 3 cut(s) 1158, 1475, 1756
SacI GAGCTC 1 cut(s) 1221
SaqAI TTAA 9 cut(s) 69, 345, 449, 636, 981, 1059, 1122, 1524, 1906
SatI GCNGC 6 cut(s) 90, 93, 739, 852, 1485, 1844
Sau96I GGNCC 2 cut(s) 143, 1233
SchI GAGTC 2 cut(s) 359, 1088
ScrFI CCNGG 3 cut(s) 525, 685, 1775
SduI GDGCHC 4 cut(s) 495, 531, 1221, 1873
SfaNI GCATC 3 cut(s) 304, 1566, 1770
SfcI CTRYAG 1 cut(s) 90
SinI GGWCC 2 cut(s) 143, 1233
SmiMI CAYNNNNRTG 3 cut(s) 1158, 1475, 1756
SmlI CTYRAG 2 cut(s) 1586, 1834
SmoI CTYRAG 2 cut(s) 1586, 1834
SpeI ACTAGT 1 cut(s) 1738
SphI GCATGC 1 cut(s) 1843
Sse9I AATT 7 cut(s) 48, 120, 688, 746, 1146, 1655, 1725
SsiI CCGC 3 cut(s) 845, 1357, 1844
SspMI CTAG 7 cut(s) 1175, 1238, 1488, 1602, 1703, 1739, 1814
SstI GAGCTC 1 cut(s) 1221
StyD4I CCNGG 3 cut(s) 523, 683, 1773
StyI CCWWGG 1 cut(s) 1345
TaiI ACGT 3 cut(s) 441, 954, 1204
TaqI TCGA 5 cut(s) 363, 800, 1097, 1332, 1374
TasI AATT 7 cut(s) 48, 120, 688, 746, 1146, 1655, 1725
TatI WGTACW 1 cut(s) 1563
TauI GCSGC 1 cut(s) 1846
TfiI GAWTC 5 cut(s) 238, 907, 999, 1329, 1780
Tru1I TTAA 9 cut(s) 69, 345, 449, 636, 981, 1059, 1122, 1524, 1906
Tru9I TTAA 9 cut(s) 69, 345, 449, 636, 981, 1059, 1122, 1524, 1906
TscAI CASTG 8 cut(s) 194, 432, 523, 736, 1048, 1096, 1772, 1902
TseFI GTSAC 3 cut(s) 731, 1091, 1545
TseI GCWGC 5 cut(s) 89, 92, 738, 851, 1484
Tsp45I GTSAC 3 cut(s) 731, 1091, 1545
TspDTI ATGAA 8 cut(s) 17, 371, 816, 1139, 1140, 1237, 1289, 1808
TspGWI ACGGA 1 cut(s) 603
TspRI CASTG 8 cut(s) 194, 432, 523, 736, 1048, 1096, 1772, 1902
Van91I CCANNNNNTGG 1 cut(s) 538
VneI GTGCAC 1 cut(s) 1869
VpaK11BI GGWCC 2 cut(s) 143, 1233
VspI ATTAAT 2 cut(s) 69, 1059
XapI RAATTY 2 cut(s) 688, 1146
XceI RCATGY 1 cut(s) 1843
XmiI GTMKAC 3 cut(s) 309, 1171, 1644
XspI CTAG 7 cut(s) 1175, 1238, 1488, 1602, 1703, 1739, 1814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.