Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000953

Physical Location & Seq

Genomic Coordinates Reverse (-)

47834740 .. 47837382

Gene Structure 2643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00427210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGATTCAGCTCTCCTCATCTTCAGGGCTGTTTCCCATCCAAAAAATCGATTACAATAATAGATATTTTGATGTCTACGATGGTGATGGTTGTATGGCGAACCGCCTCCTTAATCTTACAATTTTTACTACATCCTCCAGCTTGCTCTTTTATCCAGTACCTTATAACTTGAGCAGTGAGAACTATAACAGTTGCACTGGAAATTTCGGTGACGAGCTATCTCCCCATCTGTATTCCCGGCTGTCTCCCTATTGCTCGCAATCTCCCTATTCAGATTACGCCCAATCTCCCTATTCAGATTCTGCCCAATCTCCCTATTCAGATTCCGCGCAATCTCCCTATTCAGATTCCGCGCAATCTCCCTATCCATATTCTGCACAATCTCCCTATCCAGATTCCACTCAGTATTTTCAAGAATTTGTATTATTAAATTGTTCCACAACACAAAATGTTAGCGGATGGGGAAACTACTACATCCCCGTCAGATGTCTCAGTGTCCCAGGGCACCATCAAGTTCTTGCTGTTGAATCCTCAATTTCTATAGATGACTTGCCGTTGCCGGTGTCAACTTGCACTACTTTGAAAAAAAAATTCTATCTTCCACTGACAAGTGTAGACGACGATGGTAACGACTGTGCACCGAACAACGTTTTATCACTCGAGTGGAAACCATGGGTTTATTTCCCAGAATGTCATAACTGCAAAGGAGAGTGCTATATGGATTGCAGGAGCAATCGAATGGAGTGCTATCCTCATCGGGCTGTATATCCTGCATCTCCCTATAATCCCTATGATCAGTATGATCCCTATTATCAAGAACAAATGCCAAAGGGTCATCATGCCTCAACAACTAGGTCAATTATCATAGCAGCCAGTTTTATTCTCATATCAGCAATGGTGGTGGCAGCCATCTGGTATTATGTGAAGAAATCAGACAGGATAGAGGAAAAGGAAAATCAAATCAAGATTGAAAAGTTCCTAGATGATCACAAATCCCATGTACCAACAAGATACTCTTATGCTGATATAAAGAAGATGACAAATGGATTCAGAAAGAAGTTGGGTGAAGGAGGTTTTGGAAGTGTTTTCAGTGGAAAGCTTCCAAGTAATGGAGTTCCGGTAGCCATAAAAGTCCTCAAGGATTCTAAAGGAAATGGAGATGATTTTGTTAATGAAGTGGGAACCATTGGTAGGATTCACCACATAAACGTGGTTCGCCTACTTGGGTTTTCTGCTGAAGGAGGGAAGCGTGCTCTTATTTATGAAGACATGCCAAACAGCTCTCTGGAGAAGTTTATCACATCTAAAGATCAATCTAGTGATAACACTGCTTCATTTGATTGGATGAAACTTCGCAACATCATCACAGGTATAGCAAAGGGAATCGAGTATCTACACCAAGGGTGCGACCAAAGGATCCTCCACTTTGATATCAAGCCTCATAATATCTTGCTAGACCATGACTTTAATCCCAAGATCTCTGATTTTGGTCTGGCCAAACTCTGTTCCAAGGAAGACAGTCTTATATCTATGACTGCTGCTAGAGGCACCATAGGCTACATAGCACCTGAAGTGTTTAATGGAAACTTTGGTACCGTCTCCTACAAGTCAGATGTGTATAGTTTTGGGATGCTAGTGCTTGAAGTTATTGGAGCTAGGAAGGAATCCGCTGTTGCATCAGCCAACAGTGAGGTGTATTTTCCTGAATTGATTTATAAGAGTCTCGTTCAAGGAGAAGAGTTGGATTTGGAGCTAGGTGACGACGGAGATGCTCAAATTGCCAAGAGACTAGCAATTGTTGCACTTTGGTGCATCCAGTGGTACCCGGTGAATCGCCCTTCCATGAAAGCAGTTGTTAGAATGCTAGAAGGACCCTCTGAAAGCTTCATCATGCCACCCAATCCGTTTGCTTCAACAACTCACACGGAACCAACTGCAACAGCATCGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015695 GO:0015696 GO:0015837 GO:0015843 GO:0016020 GO:0016021 GO:0019755 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

650

Amino Acids

72.64

Weight (kDa)

5.5

Isoelectric Point (pI)

52.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	350 - 622	2.4e-41	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	352 - 620	1.5e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000953)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01480 FvH4_6g01500 FvH4_6g01501
malus_domestica	MD04G1233200.v1.1 MD12G1250800.v1.1 MD12G1251200.v1.1
prunus_persica	Prupe.6G352900_v2.0.a1 Prupe.6G352900_v2.0.a1
pyrus_communis	pycom04g20660 pycom04g20720 pycom12g23110
rosa_chinensis	RchiOBHm_Chr3g0449111 RchiOBHm_Chr3g0449121 RchiOBHm_Chr3g0449341 RchiOBHm_Chr3g0449371 RchiOBHm_Chr3g0449391 RchiOBHm_Chr7g0209911
rosa_laevigata	RLG00000025835 RLG00000025837 RLG00000025851 RLG00000025852
rosa_multiflora	Rmu_sc0001234.1_g000001 Rmu_sc0001234.1_g000005 Rmu_sc0001234.1_g000007 Rmu_sc0001234.1_g000011 Rmu_sc0003776.1_g000032 Rmu_sc0004874.1_g000012 Rmu_sc0004874.1_g000015 Rmu_sc0006661.1_g000002 Rmu_sc0006661.1_g000003 Rmu_sc0006661.1_g000005 Rmu_sc0017357.1_g000001 Rmu_sc0028145.1_g000001 Rmu_sc0032682.1_g000001 Rmu_ssc0000423.1_g000002
rosa_roxburghii	Rroxscaffold_3G00248810 Rroxscaffold_6G00427210 Rroxscaffold_6G00427350
rosa_rugosa	Rorug02G0618000 Rorug02G0618300 Rorug02G0618400.1 Rorug02G0619900 Rorug02G0620300 Rorug06G0099800 Rorug06G0099800 Rorug07G0117300
rosa_samantha	Rh3AG017800 Rh3AG018000 Rh3BG016800 Rh3BG018100 Rh3BG018300 Rh3CG015900 Rh3CG017000 Rh3CG017200 Rh3DG017100 Rh3DG018300 Rh3DG018700 Rh7BG245800
rosa_wichuraiana	Rw3G001250 Rw3G001380 Rw3G001410 Rw3G001420 Rw3G001440 Rw7G021310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	165, 1716
Acc65I	GGTACC	2 cut(s)	1592, 1821
AccB1I	GGYRCC	4 cut(s)	504, 1547, 1592, 1821
AccB7I	CCANNNNNTGG	1 cut(s)	1109
AccI	GTMKAC	2 cut(s)	75, 615
AccII	CGCG	2 cut(s)	329, 353
AciI	CCGC	5 cut(s)	103, 327, 351, 456, 1668
AclI	AACGTT	1 cut(s)	648
AclWI	GGATC	3 cut(s)	797, 1411, 1424
AcoI	YGGCCR	1 cut(s)	1494
AcsI	RAATTY	3 cut(s)	202, 416, 590
AcuI	CTGAAG	3 cut(s)	6, 1257, 1590
AfaI	GTAC	4 cut(s)	159, 1002, 1594, 1823
AfiI	CCNNNNNNNGG	2 cut(s)	1109, 1191
AgsI	TTSAA	7 cut(s)	413, 527, 583, 971, 1643, 1730, 1914
AjnI	CCWGG	1 cut(s)	499
AjuI	GAANNNNNNNTTGG	2 cut(s)	1059, 1091
AleI	CACNNNNGTG	2 cut(s)	661, 1807
AluBI	AGCT	8 cut(s)	10, 141, 217, 1099, 1281, 1655, 1753, 1884
AluI	AGCT	8 cut(s)	10, 141, 217, 1099, 1281, 1655, 1753, 1884
Alw21I	GWGCWC	2 cut(s)	640, 1255
Alw26I	GTCTC	5 cut(s)	249, 494, 1603, 1727, 1780
Alw44I	GTGCAC	1 cut(s)	636
AlwI	GGATC	3 cut(s)	797, 1411, 1424
AlwNI	CAGNNNCTG	1 cut(s)	302
Ama87I	CYCGRG	1 cut(s)	659
AoxI	GGCC	1 cut(s)	1494
ApaLI	GTGCAC	1 cut(s)	636
ApeKI	GCWGC	3 cut(s)	869, 905, 1538
ApoI	RAATTY	3 cut(s)	202, 416, 590
Asp718I	GGTACC	2 cut(s)	1592, 1821
AspLEI	GCGC	2 cut(s)	331, 355
AspS9I	GGNCC	1 cut(s)	1871
AsuC2I	CCSGG	2 cut(s)	238, 1826
AsuHPI	GGTGA	6 cut(s)	95, 221, 1076, 1190, 1769, 1840
AvaI	CYCGRG	1 cut(s)	659
AvaII	GGWCC	1 cut(s)	1871
BaeGI	GKGCMC	2 cut(s)	507, 640
BaeI	ACNNNNGTAYC	2 cut(s)	1576, 1609
BalI	TGGCCA	1 cut(s)	1496
BamHI	GGATCC	1 cut(s)	1416
BanI	GGYRCC	4 cut(s)	504, 1547, 1592, 1821
BbsI	GAAGAC	2 cut(s)	1272, 1521
Bbv12I	GWGCWC	2 cut(s)	640, 1255
BbvI	GCAGC	3 cut(s)	881, 917, 1525
BccI	CCATC	8 cut(s)	44, 74, 80, 234, 453, 516, 617, 917
BceAI	ACGGC	1 cut(s)	538
BcgI	CGANNNNNNTGC	5 cut(s)	726, 760, 1751, 1785, 1926
BciT130I	CCWGG	1 cut(s)	501
BclI	TGATCA	2 cut(s)	793, 985
BcnI	CCSGG	2 cut(s)	238, 1826
BcoDI	GTCTC	5 cut(s)	249, 494, 1603, 1727, 1780
BfmI	CTRYAG	1 cut(s)	540
BglII	AGATCT	1 cut(s)	1476
BisI	GCNGC	3 cut(s)	870, 906, 1539
BlsI	GCNGC	3 cut(s)	871, 907, 1540
Bme1390I	CCNGG	3 cut(s)	238, 501, 1826
Bme18I	GGWCC	1 cut(s)	1871
BmeT110I	CYCGRG	1 cut(s)	659
BmgT120I	GGNCC	1 cut(s)	1871
BmiI	GGNNCC	8 cut(s)	506, 1183, 1418, 1549, 1594, 1823, 1873, 1929
BmrFI	CCNGG	3 cut(s)	238, 501, 1826
BmsI	GCATC	5 cut(s)	782, 1620, 1685, 1759, 1821
BpiI	GAAGAC	2 cut(s)	1272, 1521
BpmI	CTGGAG	2 cut(s)	121, 1307
BpuEI	CTTGAG	2 cut(s)	190, 1121
BpuMI	CCSGG	2 cut(s)	238, 1826
Bsa29I	ATCGAT	1 cut(s)	48
BsaJI	CCNNGG	5 cut(s)	499, 500, 671, 1399, 1509
BsaWI	WCCGGW	1 cut(s)	1117
BsaXI	ACNNNNNCTCC	2 cut(s)	1104, 1134
Bsc4I	CCNNNNNNNGG	2 cut(s)	1109, 1191
Bse118I	RCCGGY	1 cut(s)	559
Bse1I	ACTGG	4 cut(s)	155, 202, 873, 1816
Bse3DI	GCAATG	1 cut(s)	900
BseBI	CCWGG	1 cut(s)	501
BseCI	ATCGAT	1 cut(s)	48
BseDI	CCNNGG	5 cut(s)	499, 500, 671, 1399, 1509
BseGI	GGATG	7 cut(s)	36, 131, 464, 474, 1350, 1635, 1812
BseLI	CCNNNNNNNGG	2 cut(s)	1109, 1191
BseMI	GCAATG	1 cut(s)	900
BseMII	CTCAG	2 cut(s)	416, 505
BseNI	ACTGG	4 cut(s)	155, 202, 873, 1816
BseRI	GAGGAG	1 cut(s)	4
BseSI	GKGCMC	2 cut(s)	507, 640
BseXI	GCAGC	3 cut(s)	881, 917, 1525
BsgI	GTGCAG	1 cut(s)	360
Bsh1236I	CGCG	2 cut(s)	329, 353
BshFI	GGCC	1 cut(s)	1496
BshNI	GGYRCC	4 cut(s)	504, 1547, 1592, 1821
BshVI	ATCGAT	1 cut(s)	48
BsiHKAI	GWGCWC	2 cut(s)	640, 1255
BsiHKCI	CYCGRG	1 cut(s)	659
BsiSI	CCGG	4 cut(s)	238, 560, 1118, 1826
BslFI	GGGAC	1 cut(s)	482
BslI	CCNNNNNNNGG	2 cut(s)	1109, 1191
BsmAI	GTCTC	5 cut(s)	249, 494, 1603, 1727, 1780
BsmBI	CGTCTC	1 cut(s)	1603
BsmFI	GGGAC	1 cut(s)	482
BsmI	GAATGC	1 cut(s)	1866
BsnI	GGCC	1 cut(s)	1496
BsoBI	CYCGRG	1 cut(s)	659
Bsp1286I	GDGCHC	3 cut(s)	507, 640, 1255
Bsp143I	GATC	6 cut(s)	793, 802, 985, 1309, 1416, 1476
Bsp19I	CCATGG	1 cut(s)	671
BspACI	CCGC	5 cut(s)	103, 327, 351, 456, 1668
BspANI	GGCC	1 cut(s)	1496
BspCNI	CTCAG	2 cut(s)	415, 504
BspDI	ATCGAT	1 cut(s)	48
BspFNI	CGCG	2 cut(s)	329, 353
BspLI	GGNNCC	8 cut(s)	506, 1183, 1418, 1549, 1594, 1823, 1873, 1929
BspPI	GGATC	3 cut(s)	797, 1411, 1424
BspT107I	GGYRCC	4 cut(s)	504, 1547, 1592, 1821
BsrDI	GCAATG	1 cut(s)	900
BsrFI	RCCGGY	1 cut(s)	559
BsrI	ACTGG	4 cut(s)	155, 202, 873, 1816
BssAI	RCCGGY	1 cut(s)	559
BssECI	CCNNGG	5 cut(s)	499, 500, 671, 1399, 1509
BssMI	GATC	6 cut(s)	793, 802, 985, 1309, 1416, 1476
BssT1I	CCWWGG	3 cut(s)	671, 1399, 1509
Bst2UI	CCWGG	1 cut(s)	501
Bst4CI	ACNGT	5 cut(s)	191, 635, 1520, 1597, 1688
Bst6I	CTCTTC	1 cut(s)	1731
BstAPI	GCANNNNNTGC	1 cut(s)	1799
BstC8I	GCNNGC	3 cut(s)	143, 257, 1251
BstDEI	CTNAG	2 cut(s)	402, 491
BstDSI	CCRYGG	1 cut(s)	671
BstF5I	GGATG	7 cut(s)	36, 131, 464, 474, 1350, 1635, 1812
BstFNI	CGCG	2 cut(s)	329, 353
BstHHI	GCGC	2 cut(s)	331, 355
BstKTI	GATC	6 cut(s)	796, 805, 988, 1312, 1419, 1479
BstMAI	GTCTC	5 cut(s)	249, 494, 1603, 1727, 1780
BstMBI	GATC	6 cut(s)	793, 802, 985, 1309, 1416, 1476
BstMWI	GCNNNNNNNGC	3 cut(s)	1554, 1778, 1799
BstNI	CCWGG	1 cut(s)	501
BstNSI	RCATGY	1 cut(s)	1273
BstSCI	CCNGG	3 cut(s)	236, 499, 1824
BstSFI	CTRYAG	1 cut(s)	540
BstSLI	GKGCMC	2 cut(s)	507, 640
BstUI	CGCG	2 cut(s)	329, 353
BstV1I	GCAGC	3 cut(s)	881, 917, 1525
BstV2I	GAAGAC	2 cut(s)	1272, 1521
BstX2I	RGATCY	2 cut(s)	1416, 1476
BstYI	RGATCY	2 cut(s)	1416, 1476
Bsu15I	ATCGAT	1 cut(s)	48
BsuRI	GGCC	1 cut(s)	1496
BsuTUI	ATCGAT	1 cut(s)	48
BtgI	CCRYGG	1 cut(s)	671
BtsCI	GGATG	7 cut(s)	36, 131, 464, 474, 1350, 1635, 1812
BtsI	GCAGTG	2 cut(s)	181, 1326
BtsIMutI	CAGTG	8 cut(s)	181, 195, 499, 602, 1096, 1326, 1693, 1823
Cac8I	GCNNGC	3 cut(s)	143, 257, 1251
CaiI	CAGNNNCTG	1 cut(s)	302
CfoI	GCGC	2 cut(s)	331, 355
Cfr10I	RCCGGY	1 cut(s)	559
Cfr13I	GGNCC	1 cut(s)	1871
ClaI	ATCGAT	1 cut(s)	48
Csp6I	GTAC	4 cut(s)	158, 1001, 1593, 1822
CspCI	CAANNNNNGTGG	2 cut(s)	882, 917
CviAII	CATG	7 cut(s)	672, 839, 998, 1270, 1460, 1843, 1891
CviQI	GTAC	4 cut(s)	158, 1001, 1593, 1822
DdeI	CTNAG	2 cut(s)	402, 491
DpnI	GATC	6 cut(s)	795, 804, 987, 1311, 1418, 1478
DpnII	GATC	6 cut(s)	793, 802, 985, 1309, 1416, 1476
EaeI	YGGCCR	1 cut(s)	1494
Eam1104I	CTCTTC	1 cut(s)	1731
EarI	CTCTTC	1 cut(s)	1731
Eco130I	CCWWGG	3 cut(s)	671, 1399, 1509
Eco32I	GATATC	1 cut(s)	1432
Eco47I	GGWCC	1 cut(s)	1871
Eco57I	CTGAAG	3 cut(s)	6, 1257, 1590
Eco88I	CYCGRG	1 cut(s)	659
EcoO109I	RGGNCCY	1 cut(s)	1871
EcoRII	CCWGG	1 cut(s)	499
EcoRV	GATATC	1 cut(s)	1432
EcoT14I	CCWWGG	3 cut(s)	671, 1399, 1509
ErhI	CCWWGG	3 cut(s)	671, 1399, 1509
Esp3I	CGTCTC	1 cut(s)	1603
FaeI	CATG	7 cut(s)	675, 842, 1001, 1273, 1463, 1846, 1894
FalI	AAGNNNNNCTT	4 cut(s)	1000, 1032, 1506, 1538
FaqI	GGGAC	1 cut(s)	482
FatI	CATG	7 cut(s)	671, 838, 997, 1269, 1459, 1842, 1890
FbaI	TGATCA	2 cut(s)	793, 985
FblI	GTMKAC	2 cut(s)	75, 615
Fnu4HI	GCNGC	3 cut(s)	870, 906, 1539
FokI	GGATG	7 cut(s)	23, 118, 461, 471, 1357, 1642, 1799
Fsp4HI	GCNGC	3 cut(s)	870, 906, 1539
GlaI	GCGC	2 cut(s)	330, 354
GluI	GCNGC	3 cut(s)	870, 906, 1539
GsuI	CTGGAG	2 cut(s)	121, 1307
HaeIII	GGCC	1 cut(s)	1496
HapII	CCGG	4 cut(s)	238, 560, 1118, 1826
HhaI	GCGC	2 cut(s)	331, 355
Hin1II	CATG	7 cut(s)	675, 842, 1001, 1273, 1463, 1846, 1894
Hin6I	GCGC	2 cut(s)	329, 353
HinP1I	GCGC	2 cut(s)	329, 353
HincII	GTYRAC	1 cut(s)	567
HindII	GTYRAC	1 cut(s)	567
HindIII	AAGCTT	2 cut(s)	1097, 1882
HpaII	CCGG	4 cut(s)	238, 560, 1118, 1826
HphI	GGTGA	6 cut(s)	95, 221, 1076, 1190, 1769, 1840
Hpy166II	GTNNAC	4 cut(s)	76, 567, 616, 638
Hpy188III	TCNNGA	6 cut(s)	392, 413, 815, 964, 1286, 1703
Hpy8I	GTNNAC	4 cut(s)	76, 567, 616, 638
Hpy99I	CGWCG	2 cut(s)	623, 1766
HpyAV	CCTTC	5 cut(s)	1061, 1232, 1654, 1848, 1862
HpyCH4III	ACNGT	5 cut(s)	191, 635, 1520, 1597, 1688
HpyCH4IV	ACGT	2 cut(s)	648, 1209
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1554, 1778, 1799
HpyF3I	CTNAG	2 cut(s)	402, 491
HpySE526I	ACGT	2 cut(s)	648, 1209
Hsp92II	CATG	7 cut(s)	675, 842, 1001, 1273, 1463, 1846, 1894
HspAI	GCGC	2 cut(s)	329, 353
KpnI	GGTACC	2 cut(s)	1596, 1825
Ksp22I	TGATCA	2 cut(s)	793, 985
Kzo9I	GATC	6 cut(s)	793, 802, 985, 1309, 1416, 1476
LmnI	GCTCC	3 cut(s)	729, 1652, 1750
Lsp1109I	GCAGC	3 cut(s)	881, 917, 1525
LweI	GCATC	5 cut(s)	782, 1620, 1685, 1759, 1821
MaeII	ACGT	2 cut(s)	648, 1209
MaeIII	GTNAC	3 cut(s)	209, 626, 1757
MalI	GATC	6 cut(s)	795, 804, 987, 1311, 1418, 1478
MboI	GATC	6 cut(s)	793, 802, 985, 1309, 1416, 1476
MboII	GAAGA	7 cut(s)	12, 590, 937, 1045, 1277, 1526, 1748
MfeI	CAATTG	1 cut(s)	1794
MflI	RGATCY	2 cut(s)	1416, 1476
MhlI	GDGCHC	3 cut(s)	507, 640, 1255
MlsI	TGGCCA	1 cut(s)	1496
MluNI	TGGCCA	1 cut(s)	1496
MlyI	GAGTC	1 cut(s)	1729
MmeI	TCCRAC	1 cut(s)	1722
Mox20I	TGGCCA	1 cut(s)	1496
MscI	TGGCCA	1 cut(s)	1496
MseI	TTAA	5 cut(s)	111, 428, 1170, 1467, 1578
MslI	CAYNNNNRTG	3 cut(s)	661, 1208, 1807
Msp20I	TGGCCA	1 cut(s)	1496
MspA1I	CMGCKG	1 cut(s)	1670
MspI	CCGG	4 cut(s)	238, 560, 1118, 1826
MspR9I	CCNGG	3 cut(s)	238, 501, 1826
MunI	CAATTG	1 cut(s)	1794
Mva1269I	GAATGC	1 cut(s)	1866
MvaI	CCWGG	1 cut(s)	501
MvnI	CGCG	2 cut(s)	329, 353
MwoI	GCNNNNNNNGC	3 cut(s)	1554, 1778, 1799
NciI	CCSGG	2 cut(s)	238, 1826
NcoI	CCATGG	1 cut(s)	671
NdeII	GATC	6 cut(s)	793, 802, 985, 1309, 1416, 1476
NlaIII	CATG	7 cut(s)	675, 842, 1001, 1273, 1463, 1846, 1894
NlaIV	GGNNCC	8 cut(s)	506, 1183, 1418, 1549, 1594, 1823, 1873, 1929
NmuCI	GTSAC	2 cut(s)	209, 1757
NspI	RCATGY	1 cut(s)	1273
OliI	CACNNNNGTG	2 cut(s)	661, 1807
PaeR7I	CTCGAG	1 cut(s)	659
PasI	CCCWGGG	1 cut(s)	500
PcsI	WCGNNNNNNNCGW	1 cut(s)	627
PctI	GAATGC	1 cut(s)	1866
PflMI	CCANNNNNTGG	1 cut(s)	1109
PkrI	GCNGC	3 cut(s)	871, 907, 1540
PleI	GAGTC	1 cut(s)	1728
PpsI	GAGTC	1 cut(s)	1728
PpuMI	RGGWCCY	1 cut(s)	1871
PsiI	TTATAA	2 cut(s)	165, 1716
Psp1406I	AACGTT	1 cut(s)	648
Psp5II	RGGWCCY	1 cut(s)	1871
Psp6I	CCWGG	1 cut(s)	499
PspGI	CCWGG	1 cut(s)	499
PspN4I	GGNNCC	8 cut(s)	506, 1183, 1418, 1549, 1594, 1823, 1873, 1929
PspPI	GGNCC	1 cut(s)	1871
PspPPI	RGGWCCY	1 cut(s)	1871
PspXI	VCTCGAGB	1 cut(s)	659
PstNI	CAGNNNCTG	1 cut(s)	302
PsuI	RGATCY	2 cut(s)	1416, 1476
RsaI	GTAC	4 cut(s)	159, 1002, 1594, 1823
RsaNI	GTAC	4 cut(s)	158, 1001, 1593, 1822
RseI	CAYNNNNRTG	3 cut(s)	661, 1208, 1807
SaqAI	TTAA	5 cut(s)	111, 428, 1170, 1467, 1578
SatI	GCNGC	3 cut(s)	870, 906, 1539
Sau3AI	GATC	6 cut(s)	793, 802, 985, 1309, 1416, 1476
Sau96I	GGNCC	1 cut(s)	1871
SchI	GAGTC	1 cut(s)	1729
ScrFI	CCNGG	3 cut(s)	238, 501, 1826
SduI	GDGCHC	3 cut(s)	507, 640, 1255
SfaNI	GCATC	5 cut(s)	782, 1620, 1685, 1759, 1821
SfcI	CTRYAG	1 cut(s)	540
Sfr274I	CTCGAG	1 cut(s)	659
SinI	GGWCC	1 cut(s)	1871
SlaI	CTCGAG	1 cut(s)	659
SmiMI	CAYNNNNRTG	3 cut(s)	661, 1208, 1807
SmlI	CTYRAG	3 cut(s)	169, 659, 1136
SmoI	CTYRAG	3 cut(s)	169, 659, 1136
SsiI	CCGC	5 cut(s)	103, 327, 351, 456, 1668
StyD4I	CCNGG	3 cut(s)	236, 499, 1824
StyI	CCWWGG	3 cut(s)	671, 1399, 1509
TaaI	ACNGT	5 cut(s)	191, 635, 1520, 1597, 1688
TaiI	ACGT	2 cut(s)	651, 1212
TaqI	TCGA	5 cut(s)	48, 660, 736, 1386, 1946
Tru1I	TTAA	5 cut(s)	111, 428, 1170, 1467, 1578
Tru9I	TTAA	5 cut(s)	111, 428, 1170, 1467, 1578
TscAI	CASTG	8 cut(s)	181, 202, 499, 609, 1096, 1333, 1693, 1823
TseFI	GTSAC	2 cut(s)	209, 1757
TseI	GCWGC	3 cut(s)	869, 905, 1538
Tsp45I	GTSAC	2 cut(s)	209, 1757
TspDTI	ATGAA	6 cut(s)	1188, 1278, 1323, 1361, 1859, 1876
TspGWI	ACGGA	3 cut(s)	1779, 1893, 1940
TspRI	CASTG	8 cut(s)	181, 202, 499, 609, 1096, 1333, 1693, 1823
Van91I	CCANNNNNTGG	1 cut(s)	1109
VneI	GTGCAC	1 cut(s)	636
VpaK11BI	GGWCC	1 cut(s)	1871
XapI	RAATTY	3 cut(s)	202, 416, 590
XceI	RCATGY	1 cut(s)	1273
XhoI	CTCGAG	1 cut(s)	659
XmiI	GTMKAC	2 cut(s)	75, 615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.