Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0000953

Physical Location & Seq

Genomic Coordinates Reverse (-)

1026123 .. 1028501

Gene Structure 2379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G001250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGTATGATGCACTAATAGATTCCTTAAAAACTGAAATGGATATCCTGTTGCTTCTGTGTTTCTTGCTTGTTCTTGTACCAAATACCAAAGCAGATAATCATCATGTTCGTCAGCACTGCCCGAAATCAAGGTGTAGCCATGATGGTCCCCTGATCCAGTTTCCCTTCCGTCTAAAAGGCGATCCCCCCCACTGTGGAAATCCAGGGTTTGAGGTTTCTTGCAGCACAAGCAACAACACCAATTTGACAATGATTCAGCTCTCCTCATCTTCAGGGCTGTTTCCCATCCAAAAAATCGATTACAATAATAGATATTTTGATGTCTACGATGGTGATGGTTGCATGGCGAGCCGCCTCCTTAATCTTACAATTTTTACTTCATCCAGCTTGCTCTTTTATCCACTAGCTTATCACCGAAGCAGTGAGAACAATAACAGTTGCATTGAAAATTTCAGTCAACCTCCCTATCTGGATTCCCAGCTGTCTCCCTATTGCGCGCAATCTCCCTATTCAGATTACGCCCAATCTCCCTATTCAGATTCTGCCCAATCTCCCTATTCAGATTCCGCGCAATCTCCCTATTCAGATTCCGCCCAATTTCCCTATCCAGATTCCACTCAGTATTTTAAAGAATTTGTATTATTAAATTGTTCCACAACACAAAATGTTAGCGGATGGGGAAACAACTTCATCCCAGTCAGATGTCTCAGTGTCCCAGGGCACCATCAAGTTCTTGCTGTTGAATCCTCAATTTCTATAGCTGACTTGCCGTTGCCGGTGTCAACTTGCACTACTTTGAAAAAAAAATTCTATCTTCCACTGAGAAGTGTAGATGACGATGGTAACGACTGTGCACCGAACAACGTTTTATCACTCGAGTGGAAACCATGGGTTTATTTCCCAGAATGTCATAACTGCAAAGGAGAGTGCTATATGGATTGCAGGAGCAATCGAATGGAGTGCTATCCTCATCCGGCTGTATATCCTGCATCTCCCTATAATCCCTATCACCAGTATCATCCCTATTATCAGTATTATCCCTATTATCAAGAACAAATGCCAAAGGGTCATCATGGCTCAACAACTAGGTCAATTATCATAGCAGCCAGTTTTATTCTCATATCAGCAATGGTGGTGGCAGCCATCTGGTATTATGTGAAGAAATCAGACAGGATAGAGGAAAAGGAAAATCAAATCAAGATTGAAAAGTTCCTAGATGATCACAAATCCCATGTACCAACAAGATACTCTTATGCTGATATAAAGAAGATGACAAATGGATTCAGAAAGAAGTTGGGTGAAGGAGGTTTTGGAAGTGTTTTCAGTGGAAAGCTTCCAAGTAATGGAGTTCCGGTAGCCATAAAAGTCCTCAAGGATTCTAAAGGAAATGGAGATGAATTTGTTAATGAAGTGGGAACCATTGGTAGGATTCACCACATAAACGTTGTTCGACTTCTTGGGTTTTCAGCTGAAGGAGGCAAGCGTGCTCTTATTTATGAAGACATGCCAAACAGCTCTCTGGAGAAGTTTATCACATCTAAAGATCGATCTAGTCATAACACTGCTTCATTTGATTGGATGAAACTTCGCAACATCATCACAGGTATAGCAAAGGGAATCGAGTATCTACACCAAGGGTGCGACCAAAGGATCCTCCACTTTGATATCAAGCCTCATAATATCTTGCTAGACCATGACTTTAATCCCAAGATCTCTGATTTTGGTCTGGCCAAACTCTGTTCCAAGGAAGACAGTCTTATATCTATGACTGCTGCTAGAGGCACCATAGGCTACATAGCACCTGAAGTGTTTAATGGAAACTTTGGTACCGTCTCCTACAAGTCAGATGTGTATAGTTTTGGGATGCTAGTGCTTGAAGTTATTGGAGCTAGGAAGGAATCCGCTCTTACATCGGCCAGCAGTGACGTGTATTTTCCTGAATTGATTTACAAGTGTCTCGTTCAAGGAGAAGAGTTGGATTTGGAGCTAGGTGATGACGGAGATGCTCAAATTGCTAAGAGACTTGCAAATATTGCACTTTGGTGCATCCAGTGGTACCCTGTGAATCGCCCATCCATGAAAGCAGTTGTTAGAATGCTAGAAGGACCCTCTGAAAGCTTGATCATGCCACCCAATCCATTTGCTTCAACAACTCACACGGAACCAACACAGCAACACCATCTAGCTGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015695 GO:0015696 GO:0015837 GO:0015843 GO:0016020 GO:0016021 GO:0019755 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

730

Amino Acids

82.04

Weight (kDa)

6.11

Isoelectric Point (pI)

49.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	40 - 110	1.8e-15	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	428 - 700	1.8e-41	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	430 - 698	4.4e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000953)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01480 FvH4_6g01500 FvH4_6g01501
malus_domestica	MD04G1233200.v1.1 MD12G1250800.v1.1 MD12G1251200.v1.1
prunus_persica	Prupe.6G352900_v2.0.a1 Prupe.6G352900_v2.0.a1
pyrus_communis	pycom04g20660 pycom04g20720 pycom12g23110
rosa_chinensis	RchiOBHm_Chr3g0449111 RchiOBHm_Chr3g0449121 RchiOBHm_Chr3g0449341 RchiOBHm_Chr3g0449371 RchiOBHm_Chr3g0449391 RchiOBHm_Chr7g0209911
rosa_laevigata	RLG00000025835 RLG00000025837 RLG00000025851 RLG00000025852
rosa_multiflora	Rmu_sc0001234.1_g000001 Rmu_sc0001234.1_g000005 Rmu_sc0001234.1_g000007 Rmu_sc0001234.1_g000011 Rmu_sc0003776.1_g000032 Rmu_sc0004874.1_g000012 Rmu_sc0004874.1_g000015 Rmu_sc0006661.1_g000002 Rmu_sc0006661.1_g000003 Rmu_sc0006661.1_g000005 Rmu_sc0017357.1_g000001 Rmu_sc0028145.1_g000001 Rmu_sc0032682.1_g000001 Rmu_ssc0000423.1_g000002
rosa_roxburghii	Rroxscaffold_3G00248810 Rroxscaffold_6G00427210 Rroxscaffold_6G00427350
rosa_rugosa	Rorug02G0618000 Rorug02G0618300 Rorug02G0618400.1 Rorug02G0619900 Rorug02G0620300 Rorug06G0099800 Rorug06G0099800 Rorug07G0117300
rosa_samantha	Rh3AG017800 Rh3AG018000 Rh3BG016800 Rh3BG018100 Rh3BG018300 Rh3CG015900 Rh3CG017000 Rh3CG017200 Rh3DG017100 Rh3DG018300 Rh3DG018700 Rh7BG245800
rosa_wichuraiana	Rw3G001250 Rw3G001380 Rw3G001410 Rw3G001420 Rw3G001440 Rw7G021310

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	1826, 2055
AccB1I	GGYRCC	4 cut(s)	720, 1781, 1826, 2055
AccB7I	CCANNNNNTGG	1 cut(s)	1343
AccBSI	CCGCTC	1 cut(s)	1904
AccI	GTMKAC	1 cut(s)	324
AccII	CGCG	2 cut(s)	497, 569
AciI	CCGC	5 cut(s)	352, 567, 591, 672, 1902
AclI	AACGTT	2 cut(s)	864, 1443
AclWI	GGATC	4 cut(s)	148, 176, 1645, 1658
AcoI	YGGCCR	2 cut(s)	1728, 1914
AcsI	RAATTY	4 cut(s)	448, 632, 806, 1397
AcuI	CTGAAG	3 cut(s)	255, 1491, 1824
AfaI	GTAC	4 cut(s)	78, 1236, 1828, 2057
AfiI	CCNNNNNNNGG	3 cut(s)	194, 1343, 1425
AflIII	ACRYGT	1 cut(s)	1926
AgsI	TTSAA	7 cut(s)	446, 743, 799, 1205, 1877, 1964, 2148
AjiI	CACGTC	1 cut(s)	1927
AjnI	CCWGG	2 cut(s)	202, 715
AjuI	GAANNNNNNNTTGG	2 cut(s)	1293, 1325
AleI	CACNNNNGTG	2 cut(s)	877, 2041
Alw21I	GWGCWC	2 cut(s)	856, 1489
Alw26I	GTCTC	5 cut(s)	489, 710, 1837, 1961, 2014
Alw44I	GTGCAC	1 cut(s)	852
AlwI	GGATC	4 cut(s)	148, 176, 1645, 1658
AlwNI	CAGNNNCTG	1 cut(s)	542
Ama87I	CYCGRG	1 cut(s)	875
AoxI	GGCC	2 cut(s)	1728, 1914
ApaLI	GTGCAC	1 cut(s)	852
ApeKI	GCWGC	4 cut(s)	222, 1103, 1139, 1772
ApoI	RAATTY	4 cut(s)	448, 632, 806, 1397
Asp718I	GGTACC	2 cut(s)	1826, 2055
AspLEI	GCGC	3 cut(s)	497, 499, 571
AspS9I	GGNCC	2 cut(s)	146, 2105
AsuHPI	GGTGA	6 cut(s)	344, 404, 1001, 1310, 1424, 2003
AvaI	CYCGRG	1 cut(s)	875
AvaII	GGWCC	2 cut(s)	146, 2105
BaeGI	GKGCMC	2 cut(s)	723, 856
BaeI	ACNNNNGTAYC	2 cut(s)	1810, 1843
BalI	TGGCCA	1 cut(s)	1730
BamHI	GGATCC	1 cut(s)	1650
BanI	GGYRCC	4 cut(s)	720, 1781, 1826, 2055
BbsI	GAAGAC	2 cut(s)	1506, 1755
Bbv12I	GWGCWC	2 cut(s)	856, 1489
BbvI	GCAGC	4 cut(s)	234, 1115, 1151, 1759
BceAI	ACGGC	1 cut(s)	754
BcgI	CGANNNNNNTGC	2 cut(s)	942, 976
BciT130I	CCWGG	2 cut(s)	204, 717
BclI	TGATCA	2 cut(s)	1219, 2121
BcoDI	GTCTC	5 cut(s)	489, 710, 1837, 1961, 2014
BfmI	CTRYAG	1 cut(s)	756
BglII	AGATCT	1 cut(s)	1710
BisI	GCNGC	5 cut(s)	223, 352, 1104, 1140, 1773
BlsI	GCNGC	5 cut(s)	224, 353, 1105, 1141, 1774
Bme1390I	CCNGG	2 cut(s)	204, 717
Bme18I	GGWCC	2 cut(s)	146, 2105
BmeT110I	CYCGRG	1 cut(s)	875
BmgBI	CACGTC	1 cut(s)	1927
BmgT120I	GGNCC	2 cut(s)	146, 2105
BmiI	GGNNCC	9 cut(s)	148, 722, 1417, 1652, 1783, 1828, 2057, 2107, 2163
BmrFI	CCNGG	2 cut(s)	204, 717
BmrI	ACTGGG	1 cut(s)	689
BmsI	GCATC	4 cut(s)	998, 1854, 1993, 2055
BmuI	ACTGGG	1 cut(s)	689
BpiI	GAAGAC	2 cut(s)	1506, 1755
BpmI	CTGGAG	1 cut(s)	1541
BpuEI	CTTGAG	1 cut(s)	1355
Bsa29I	ATCGAT	2 cut(s)	297, 1546
BsaBI	GATNNNNATC	1 cut(s)	99
BsaJI	CCNNGG	6 cut(s)	203, 715, 716, 887, 1633, 1743
BsaWI	WCCGGW	1 cut(s)	1351
BsaXI	ACNNNNNCTCC	2 cut(s)	1338, 1368
Bsc4I	CCNNNNNNNGG	3 cut(s)	194, 1343, 1425
Bse118I	RCCGGY	1 cut(s)	775
Bse1I	ACTGG	5 cut(s)	157, 695, 1012, 1107, 2050
Bse3DI	GCAATG	1 cut(s)	1134
Bse8I	GATNNNNATC	1 cut(s)	99
BseBI	CCWGG	2 cut(s)	204, 717
BseCI	ATCGAT	2 cut(s)	297, 1546
BseDI	CCNNGG	6 cut(s)	203, 715, 716, 887, 1633, 1743
BseJI	GATNNNNATC	1 cut(s)	99
BseLI	CCNNNNNNNGG	3 cut(s)	194, 1343, 1425
BseMI	GCAATG	1 cut(s)	1134
BseMII	CTCAG	3 cut(s)	632, 721, 812
BseNI	ACTGG	5 cut(s)	157, 695, 1012, 1107, 2050
BsePI	GCGCGC	1 cut(s)	495
BseRI	GAGGAG	1 cut(s)	253
BseSI	GKGCMC	2 cut(s)	723, 856
BseXI	GCAGC	4 cut(s)	234, 1115, 1151, 1759
BseYI	CCCAGC	1 cut(s)	477
Bsh1236I	CGCG	2 cut(s)	497, 569
BshFI	GGCC	2 cut(s)	1730, 1916
BshNI	GGYRCC	4 cut(s)	720, 1781, 1826, 2055
BshVI	ATCGAT	2 cut(s)	297, 1546
BsiHKAI	GWGCWC	2 cut(s)	856, 1489
BsiHKCI	CYCGRG	1 cut(s)	875
BsiSI	CCGG	3 cut(s)	776, 974, 1352
BslFI	GGGAC	2 cut(s)	132, 698
BslI	CCNNNNNNNGG	3 cut(s)	194, 1343, 1425
BsmAI	GTCTC	5 cut(s)	489, 710, 1837, 1961, 2014
BsmBI	CGTCTC	1 cut(s)	1837
BsmFI	GGGAC	2 cut(s)	132, 698
BsmI	GAATGC	1 cut(s)	2100
BsnI	GGCC	2 cut(s)	1730, 1916
BsoBI	CYCGRG	1 cut(s)	875
Bsp1286I	GDGCHC	3 cut(s)	723, 856, 1489
Bsp143I	GATC	8 cut(s)	153, 181, 1219, 1543, 1547, 1650, 1710, 2121
Bsp19I	CCATGG	1 cut(s)	887
BspACI	CCGC	5 cut(s)	352, 567, 591, 672, 1902
BspANI	GGCC	2 cut(s)	1730, 1916
BspCNI	CTCAG	3 cut(s)	631, 720, 813
BspDI	ATCGAT	2 cut(s)	297, 1546
BspFNI	CGCG	2 cut(s)	497, 569
BspLI	GGNNCC	9 cut(s)	148, 722, 1417, 1652, 1783, 1828, 2057, 2107, 2163
BspPI	GGATC	4 cut(s)	148, 176, 1645, 1658
BspT107I	GGYRCC	4 cut(s)	720, 1781, 1826, 2055
BsrBI	CCGCTC	1 cut(s)	1904
BsrDI	GCAATG	1 cut(s)	1134
BsrFI	RCCGGY	1 cut(s)	775
BsrI	ACTGG	5 cut(s)	157, 695, 1012, 1107, 2050
BssAI	RCCGGY	1 cut(s)	775
BssECI	CCNNGG	6 cut(s)	203, 715, 716, 887, 1633, 1743
BssHII	GCGCGC	1 cut(s)	495
BssMI	GATC	8 cut(s)	153, 181, 1219, 1543, 1547, 1650, 1710, 2121
BssT1I	CCWWGG	3 cut(s)	887, 1633, 1743
Bst2UI	CCWGG	2 cut(s)	204, 717
Bst4CI	ACNGT	5 cut(s)	194, 437, 851, 1754, 1831
Bst6I	CTCTTC	1 cut(s)	1965
BstAPI	GCANNNNNTGC	1 cut(s)	2033
BstC8I	GCNNGC	6 cut(s)	349, 389, 497, 1481, 1485, 1918
BstDEI	CTNAG	4 cut(s)	618, 707, 821, 2016
BstDSI	CCRYGG	1 cut(s)	887
BstFNI	CGCG	2 cut(s)	497, 569
BstHHI	GCGC	3 cut(s)	497, 499, 571
BstKTI	GATC	8 cut(s)	156, 184, 1222, 1546, 1550, 1653, 1713, 2124
BstMAI	GTCTC	5 cut(s)	489, 710, 1837, 1961, 2014
BstMBI	GATC	8 cut(s)	153, 181, 1219, 1543, 1547, 1650, 1710, 2121
BstMWI	GCNNNNNNNGC	5 cut(s)	228, 348, 1788, 2012, 2033
BstNI	CCWGG	2 cut(s)	204, 717
BstNSI	RCATGY	1 cut(s)	1507
BstSCI	CCNGG	2 cut(s)	202, 715
BstSFI	CTRYAG	1 cut(s)	756
BstSLI	GKGCMC	2 cut(s)	723, 856
BstUI	CGCG	2 cut(s)	497, 569
BstV1I	GCAGC	4 cut(s)	234, 1115, 1151, 1759
BstV2I	GAAGAC	2 cut(s)	1506, 1755
BstX2I	RGATCY	2 cut(s)	1650, 1710
BstYI	RGATCY	2 cut(s)	1650, 1710
Bsu15I	ATCGAT	2 cut(s)	297, 1546
BsuRI	GGCC	2 cut(s)	1730, 1916
BsuTUI	ATCGAT	2 cut(s)	297, 1546
BtgI	CCRYGG	1 cut(s)	887
BtrI	CACGTC	1 cut(s)	1927
BtsI	GCAGTG	4 cut(s)	115, 427, 1560, 1927
BtsIMutI	CAGTG	9 cut(s)	115, 190, 427, 715, 818, 1330, 1560, 1927, 2057
Cac8I	GCNNGC	6 cut(s)	349, 389, 497, 1481, 1485, 1918
CaiI	CAGNNNCTG	1 cut(s)	542
CfoI	GCGC	3 cut(s)	497, 499, 571
Cfr10I	RCCGGY	1 cut(s)	775
Cfr13I	GGNCC	2 cut(s)	146, 2105
ClaI	ATCGAT	2 cut(s)	297, 1546
Csp6I	GTAC	4 cut(s)	77, 1235, 1827, 2056
CspCI	CAANNNNNGTGG	2 cut(s)	1116, 1151
CviQI	GTAC	4 cut(s)	77, 1235, 1827, 2056
DdeI	CTNAG	4 cut(s)	618, 707, 821, 2016
DpnI	GATC	8 cut(s)	155, 183, 1221, 1545, 1549, 1652, 1712, 2123
DpnII	GATC	8 cut(s)	153, 181, 1219, 1543, 1547, 1650, 1710, 2121
DraI	TTTAAA	1 cut(s)	628
EaeI	YGGCCR	2 cut(s)	1728, 1914
Eam1104I	CTCTTC	1 cut(s)	1965
EarI	CTCTTC	1 cut(s)	1965
EciI	GGCGGA	1 cut(s)	580
Eco130I	CCWWGG	3 cut(s)	887, 1633, 1743
Eco32I	GATATC	2 cut(s)	43, 1666
Eco47I	GGWCC	2 cut(s)	146, 2105
Eco57I	CTGAAG	3 cut(s)	255, 1491, 1824
Eco88I	CYCGRG	1 cut(s)	875
EcoO109I	RGGNCCY	1 cut(s)	2105
EcoRII	CCWGG	2 cut(s)	202, 715
EcoRV	GATATC	2 cut(s)	43, 1666
EcoT14I	CCWWGG	3 cut(s)	887, 1633, 1743
ErhI	CCWWGG	3 cut(s)	887, 1633, 1743
Esp3I	CGTCTC	1 cut(s)	1837
FalI	AAGNNNNNCTT	4 cut(s)	1234, 1266, 1740, 1772
FaqI	GGGAC	2 cut(s)	132, 698
FbaI	TGATCA	2 cut(s)	1219, 2121
FblI	GTMKAC	1 cut(s)	324
Fnu4HI	GCNGC	5 cut(s)	223, 352, 1104, 1140, 1773
Fsp4HI	GCNGC	5 cut(s)	223, 352, 1104, 1140, 1773
GlaI	GCGC	3 cut(s)	496, 498, 570
GluI	GCNGC	5 cut(s)	223, 352, 1104, 1140, 1773
GsaI	CCCAGC	1 cut(s)	481
GsuI	CTGGAG	1 cut(s)	1541
HaeIII	GGCC	2 cut(s)	1730, 1916
HapII	CCGG	3 cut(s)	776, 974, 1352
HhaI	GCGC	3 cut(s)	497, 499, 571
Hin6I	GCGC	3 cut(s)	495, 497, 569
HinP1I	GCGC	3 cut(s)	495, 497, 569
HincII	GTYRAC	2 cut(s)	458, 783
HindII	GTYRAC	2 cut(s)	458, 783
HindIII	AAGCTT	2 cut(s)	1331, 2116
HpaII	CCGG	3 cut(s)	776, 974, 1352
HphI	GGTGA	6 cut(s)	344, 404, 1001, 1310, 1424, 2003
Hpy166II	GTNNAC	4 cut(s)	325, 458, 783, 854
Hpy188III	TCNNGA	6 cut(s)	470, 608, 1049, 1198, 1520, 1937
Hpy8I	GTNNAC	4 cut(s)	325, 458, 783, 854
HpyAV	CCTTC	5 cut(s)	175, 1295, 1466, 1888, 2096
HpyCH4III	ACNGT	5 cut(s)	194, 437, 851, 1754, 1831
HpyCH4IV	ACGT	3 cut(s)	864, 1443, 1926
HpyF10VI	GCNNNNNNNGC	5 cut(s)	228, 348, 1788, 2012, 2033
HpyF3I	CTNAG	4 cut(s)	618, 707, 821, 2016
HpySE526I	ACGT	3 cut(s)	864, 1443, 1926
HspAI	GCGC	3 cut(s)	495, 497, 569
KpnI	GGTACC	2 cut(s)	1830, 2059
Ksp22I	TGATCA	2 cut(s)	1219, 2121
Kzo9I	GATC	8 cut(s)	153, 181, 1219, 1543, 1547, 1650, 1710, 2121
LmnI	GCTCC	3 cut(s)	945, 1886, 1984
Lsp1109I	GCAGC	4 cut(s)	234, 1115, 1151, 1759
LweI	GCATC	4 cut(s)	998, 1854, 1993, 2055
MaeII	ACGT	3 cut(s)	864, 1443, 1926
MaeIII	GTNAC	2 cut(s)	842, 1922
MalI	GATC	8 cut(s)	155, 183, 1221, 1545, 1549, 1652, 1712, 2123
MbiI	CCGCTC	1 cut(s)	1904
MboI	GATC	8 cut(s)	153, 181, 1219, 1543, 1547, 1650, 1710, 2121
MboII	GAAGA	7 cut(s)	261, 806, 1171, 1279, 1511, 1760, 1982
MflI	RGATCY	2 cut(s)	1650, 1710
MhlI	GDGCHC	3 cut(s)	723, 856, 1489
MlsI	TGGCCA	1 cut(s)	1730
MluNI	TGGCCA	1 cut(s)	1730
MmeI	TCCRAC	1 cut(s)	1956
Mox20I	TGGCCA	1 cut(s)	1730
MscI	TGGCCA	1 cut(s)	1730
MseI	TTAA	7 cut(s)	26, 360, 627, 644, 1404, 1701, 1812
MslI	CAYNNNNRTG	2 cut(s)	877, 2041
Msp20I	TGGCCA	1 cut(s)	1730
MspA1I	CMGCKG	2 cut(s)	481, 1469
MspI	CCGG	3 cut(s)	776, 974, 1352
MspR9I	CCNGG	2 cut(s)	204, 717
Mva1269I	GAATGC	1 cut(s)	2100
MvaI	CCWGG	2 cut(s)	204, 717
MvnI	CGCG	2 cut(s)	497, 569
MwoI	GCNNNNNNNGC	5 cut(s)	228, 348, 1788, 2012, 2033
NcoI	CCATGG	1 cut(s)	887
NdeII	GATC	8 cut(s)	153, 181, 1219, 1543, 1547, 1650, 1710, 2121
NlaIV	GGNNCC	9 cut(s)	148, 722, 1417, 1652, 1783, 1828, 2057, 2107, 2163
NmuCI	GTSAC	1 cut(s)	1922
NspI	RCATGY	1 cut(s)	1507
OliI	CACNNNNGTG	2 cut(s)	877, 2041
PaeR7I	CTCGAG	1 cut(s)	875
PasI	CCCWGGG	1 cut(s)	716
PauI	GCGCGC	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	1 cut(s)	843
PctI	GAATGC	1 cut(s)	2100
PflMI	CCANNNNNTGG	1 cut(s)	1343
PkrI	GCNGC	5 cut(s)	224, 353, 1105, 1141, 1774
PpuMI	RGGWCCY	1 cut(s)	2105
Psp1406I	AACGTT	2 cut(s)	864, 1443
Psp5II	RGGWCCY	1 cut(s)	2105
Psp6I	CCWGG	2 cut(s)	202, 715
PspFI	CCCAGC	1 cut(s)	477
PspGI	CCWGG	2 cut(s)	202, 715
PspN4I	GGNNCC	9 cut(s)	148, 722, 1417, 1652, 1783, 1828, 2057, 2107, 2163
PspPI	GGNCC	2 cut(s)	146, 2105
PspPPI	RGGWCCY	1 cut(s)	2105
PspXI	VCTCGAGB	1 cut(s)	875
PstNI	CAGNNNCTG	1 cut(s)	542
PsuI	RGATCY	2 cut(s)	1650, 1710
PteI	GCGCGC	1 cut(s)	495
PvuII	CAGCTG	2 cut(s)	481, 1469
RsaI	GTAC	4 cut(s)	78, 1236, 1828, 2057
RsaNI	GTAC	4 cut(s)	77, 1235, 1827, 2056
RseI	CAYNNNNRTG	2 cut(s)	877, 2041
SaqAI	TTAA	7 cut(s)	26, 360, 627, 644, 1404, 1701, 1812
SatI	GCNGC	5 cut(s)	223, 352, 1104, 1140, 1773
Sau3AI	GATC	8 cut(s)	153, 181, 1219, 1543, 1547, 1650, 1710, 2121
Sau96I	GGNCC	2 cut(s)	146, 2105
ScrFI	CCNGG	2 cut(s)	204, 717
SduI	GDGCHC	3 cut(s)	723, 856, 1489
SfaNI	GCATC	4 cut(s)	998, 1854, 1993, 2055
SfcI	CTRYAG	1 cut(s)	756
Sfr274I	CTCGAG	1 cut(s)	875
SinI	GGWCC	2 cut(s)	146, 2105
SlaI	CTCGAG	1 cut(s)	875
SmiMI	CAYNNNNRTG	2 cut(s)	877, 2041
SmlI	CTYRAG	2 cut(s)	875, 1370
SmoI	CTYRAG	2 cut(s)	875, 1370
SsiI	CCGC	5 cut(s)	352, 567, 591, 672, 1902
SspI	AATATT	1 cut(s)	2032
StyD4I	CCNGG	2 cut(s)	202, 715
StyI	CCWWGG	3 cut(s)	887, 1633, 1743
TaaI	ACNGT	5 cut(s)	194, 437, 851, 1754, 1831
TaiI	ACGT	3 cut(s)	867, 1446, 1929
TaqI	TCGA	6 cut(s)	297, 876, 952, 1450, 1546, 1620
TauI	GCSGC	1 cut(s)	354
Tru1I	TTAA	7 cut(s)	26, 360, 627, 644, 1404, 1701, 1812
Tru9I	TTAA	7 cut(s)	26, 360, 627, 644, 1404, 1701, 1812
TscAI	CASTG	9 cut(s)	122, 197, 427, 715, 825, 1330, 1567, 1927, 2057
TseFI	GTSAC	1 cut(s)	1922
TseI	GCWGC	4 cut(s)	222, 1103, 1139, 1772
Tsp45I	GTSAC	1 cut(s)	1922
TspDTI	ATGAA	8 cut(s)	369, 679, 1410, 1422, 1512, 1557, 1595, 2093
TspGWI	ACGGA	3 cut(s)	158, 2013, 2174
TspRI	CASTG	9 cut(s)	122, 197, 427, 715, 825, 1330, 1567, 1927, 2057
Van91I	CCANNNNNTGG	1 cut(s)	1343
VneI	GTGCAC	1 cut(s)	852
VpaK11BI	GGWCC	2 cut(s)	146, 2105
XapI	RAATTY	4 cut(s)	448, 632, 806, 1397
XceI	RCATGY	1 cut(s)	1507
XhoI	CTCGAG	1 cut(s)	875
XmiI	GTMKAC	1 cut(s)	324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.