Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0000953

Physical Location & Seq

Genomic Coordinates Forward (+)

1175518 .. 1177873

Gene Structure 2356 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G001410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGGAATCATGCCTCTGCTGAAGCCTCTGTTTTTCTTGCTTGTAATTGTGTTCCCAATTATTGTTGAACCAATTAGCAAATCAGCTGATGATCAGGACTGCCCAGTTCAGAGGTGTAGGCATGATGGTCCCCTTATCCAGTTTCCATTCCGTCTACAACACTATCCCCTTCACTGTGGCCATCCAGAGTTTGAGGTTTCCTGCAGCAGCTTCACCAACATGACCATGATAAAGCTTTCCTCATCATCAGGATTCTTTCTAATACAGTCAATTGATTACAAGAGACAGCAGTTTCGTGTGTATGATGAGGATGGTTGCCTCCCGAGACGCCTTCTTAATTTTACTGTCTCCTCCTCGTTCTTTCAACCAGCACATGTGATTGACGATTCCGTTTGCTTTTACAATTACATGACGTCGAGGAACATGACGTTGTTAAATTGTACCACGGCACAAAATTTGAGCGAATCCACCACACCAGCTGACAACTCCATAGCGATCACATGTCTCAGTGTCCCAGGGCATTATCAGATTCTGGCTGTTACCGAGTATTTTGCTTCCTCTGACTTGCCGGTAGGCAGTGATTGCTATACTTTGTCAGAACTCTTTCTTCCAGTTCAAAAAACACACGATGATAGGTGTGAACCGGACACGGGTTTATTACTGGAATGGAGTGAATCGGATTTCCCAGAATGTCAAAAATGTAGAGGAAGCTGCTATTTCAGTTACAGCAGCAATCAAGTCTTGAAGTGTTATCCTCGAAAACACAAAGGTCTATCAACCAGGTTTATTGTCATGGGAGTGAGTGTATGTGGGTTTGTTGTCTTGTCAACTACGGTGGTAGCCATCTTTTACCATTTAAAGCAATCAAAGAGGATAGAGGATAAGGAGAATCAAAGAAAGATTGAAAAGTTCCTAGATGATCACAAGTCCCATGTACCAACAAGATACTCCTACGCTGATATAAAGAAGATGACAAATGGATTCACGAAGAAGTTGGGTGAAGGAGGTTTCGGAAGTGTTTTCAGTGGAAAGCTTCCCGCTAATGGAGTGCCAGTTGCCGTAAAATTTCTCAAGGATTCTAAAGGAAATGGAGATGATTTTGTTAATGAAGTGGGAACCATTGGCAGAATTCACCATGTTAACGTGGTTCGACTGCTTGGGTTTTCAGCCGAACGAGGGAGGCGTGCTCTTATTTATGAACACATGCCAAACAGGTCCCTAGAGAAGTTCATCAAATCTAGAGGATCAAATAAGAGCAGCAGTTCATTTAACTGGGAGAAACTTTGCAACATCATCACAGGTATAGCAAAGGGAATCGAGTACCTTCACCAAGGGTGTGACCAGAGGATTCTCCACTTTGATATCAAGCCTCACAATATCTTGTTAGACCATGCCTTTAATCCGAAGATTTCTGATTTTGGTATGGCTAAACTCTGTTCCAAGGAAGATAGTGCTATATCTATGACTGCTGCCAGAGGCACTATGGGCTACATTGCGCCTGAAGTATTTAATGGCAACTTTGGAACTGTCTCCTACAAATCGGATGTGTATAGTTTCGGGATGCTAGTTCTTGAAGTTATTGGAGCCATGAAGGAAACTGGTGTTACATCTAGCGACAATGAGGTGTATTTTCCTGAATTGATTTACAAGTGTCTGATCCAGGGAGAAGAGTTGGATTTGGAGCTAGCTGATGATGGAGATGCTCAGATTGCTAAGAGATTAGCAATTGTGGCACTTTGGTGCATCCAGTGGTACCCGGTGAGTCGCCCTTCCATGAAAGTCGTTGTTAGAATGCTGGAAGGAACCTTTGAAAGCTTGATCATGCCACCCAATCCGTTTGCTTCCACAACTCAAATGGAACCAACAACAACCCCATCAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015695 GO:0015696 GO:0015837 GO:0015843 GO:0016020 GO:0016021 GO:0019755 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

627

Amino Acids

70.39

Weight (kDa)

6.66

Isoelectric Point (pI)

42.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	34 - 102	2.9e-14	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	328 - 598	2.9e-41	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	329 - 596	1.3e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000953)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01480 FvH4_6g01500 FvH4_6g01501
malus_domestica	MD04G1233200.v1.1 MD12G1250800.v1.1 MD12G1251200.v1.1
prunus_persica	Prupe.6G352900_v2.0.a1 Prupe.6G352900_v2.0.a1
pyrus_communis	pycom04g20660 pycom04g20720 pycom12g23110
rosa_chinensis	RchiOBHm_Chr3g0449111 RchiOBHm_Chr3g0449121 RchiOBHm_Chr3g0449341 RchiOBHm_Chr3g0449371 RchiOBHm_Chr3g0449391 RchiOBHm_Chr7g0209911
rosa_laevigata	RLG00000025835 RLG00000025837 RLG00000025851 RLG00000025852
rosa_multiflora	Rmu_sc0001234.1_g000001 Rmu_sc0001234.1_g000005 Rmu_sc0001234.1_g000007 Rmu_sc0001234.1_g000011 Rmu_sc0003776.1_g000032 Rmu_sc0004874.1_g000012 Rmu_sc0004874.1_g000015 Rmu_sc0006661.1_g000002 Rmu_sc0006661.1_g000003 Rmu_sc0006661.1_g000005 Rmu_sc0017357.1_g000001 Rmu_sc0028145.1_g000001 Rmu_sc0032682.1_g000001 Rmu_ssc0000423.1_g000002
rosa_roxburghii	Rroxscaffold_3G00248810 Rroxscaffold_6G00427210 Rroxscaffold_6G00427350
rosa_rugosa	Rorug02G0618000 Rorug02G0618300 Rorug02G0618400.1 Rorug02G0619900 Rorug02G0620300 Rorug06G0099800 Rorug06G0099800 Rorug07G0117300
rosa_samantha	Rh3AG017800 Rh3AG018000 Rh3BG016800 Rh3BG018100 Rh3BG018300 Rh3CG015900 Rh3CG017000 Rh3CG017200 Rh3DG017100 Rh3DG018300 Rh3DG018700 Rh7BG245800
rosa_wichuraiana	Rw3G001250 Rw3G001380 Rw3G001410 Rw3G001420 Rw3G001440 Rw7G021310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	416
Acc65I	GGTACC	1 cut(s)	1752
AccB1I	GGYRCC	1 cut(s)	1752
AccI	GTMKAC	1 cut(s)	154
AciI	CCGC	1 cut(s)	1038
AclWI	GGATC	2 cut(s)	1252, 1651
AcoI	YGGCCR	1 cut(s)	178
AcsI	RAATTY	3 cut(s)	454, 1064, 1128
AcuI	CTGAAG	2 cut(s)	41, 1521
AcyI	GRCGYC	2 cut(s)	328, 413
AfaI	GTAC	4 cut(s)	442, 936, 1322, 1754
AfiI	CCNNNNNNNGG	3 cut(s)	650, 1043, 1176
AflIII	ACRYGT	2 cut(s)	373, 500
AgsI	TTSAA	7 cut(s)	68, 365, 617, 745, 905, 1574, 1811
AjnI	CCWGG	3 cut(s)	514, 779, 1659
AleI	CACNNNNGTG	1 cut(s)	1738
AluBI	AGCT	9 cut(s)	86, 210, 235, 479, 711, 1033, 1684, 1688, 1815
AluI	AGCT	9 cut(s)	86, 210, 235, 479, 711, 1033, 1684, 1688, 1815
Alw21I	GWGCWC	1 cut(s)	1189
Alw26I	GTCTC	5 cut(s)	277, 319, 352, 509, 1534
AlwI	GGATC	2 cut(s)	1252, 1651
AlwNI	CAGNNNCTG	1 cut(s)	532
Ama87I	CYCGRG	1 cut(s)	322
AoxI	GGCC	1 cut(s)	178
ApeKI	GCWGC	6 cut(s)	204, 207, 711, 729, 1257, 1469
ApoI	RAATTY	3 cut(s)	454, 1064, 1128
ArsI	GACNNNNNNTTYG	2 cut(s)	276, 308
Asp700I	GAANNNNTTC	1 cut(s)	603
Asp718I	GGTACC	1 cut(s)	1752
AspLEI	GCGC	1 cut(s)	1498
AspS9I	GGNCC	2 cut(s)	128, 1215
AsuC2I	CCSGG	1 cut(s)	1757
AsuHPI	GGTGA	5 cut(s)	205, 1010, 1124, 1319, 1771
AsuNHI	GCTAGC	1 cut(s)	1684
AvaI	CYCGRG	1 cut(s)	322
AvaII	GGWCC	2 cut(s)	128, 1215
BalI	TGGCCA	1 cut(s)	180
BanI	GGYRCC	1 cut(s)	1752
Bbv12I	GWGCWC	1 cut(s)	1189
BbvI	GCAGC	6 cut(s)	216, 219, 698, 741, 1269, 1456
BccI	CCATC	6 cut(s)	119, 189, 305, 851, 1688, 1882
BceAI	ACGGC	2 cut(s)	462, 1043
BcgI	CGANNNNNNTGC	2 cut(s)	533, 567
BciT130I	CCWGG	3 cut(s)	516, 781, 1661
BclI	TGATCA	3 cut(s)	91, 919, 1818
BcnI	CCSGG	1 cut(s)	1757
BcoDI	GTCTC	5 cut(s)	277, 319, 352, 509, 1534
BfaI	CTAG	6 cut(s)	914, 1220, 1239, 1565, 1611, 1685
BfmI	CTRYAG	1 cut(s)	202
BisI	GCNGC	6 cut(s)	205, 208, 712, 730, 1258, 1470
BlsI	GCNGC	6 cut(s)	206, 209, 713, 731, 1259, 1471
Bme1390I	CCNGG	4 cut(s)	516, 781, 1661, 1757
Bme18I	GGWCC	2 cut(s)	128, 1215
BmeT110I	CYCGRG	1 cut(s)	322
BmgT120I	GGNCC	2 cut(s)	128, 1215
BmiI	GGNNCC	7 cut(s)	130, 1117, 1217, 1585, 1754, 1804, 1860
BmrFI	CCNGG	4 cut(s)	516, 781, 1661, 1757
BmrI	ACTGGG	2 cut(s)	98, 1282
BmsI	GCATC	3 cut(s)	1551, 1690, 1752
BmtI	GCTAGC	1 cut(s)	1688
BmuI	ACTGGG	2 cut(s)	98, 1282
BplI	GAGNNNNNCTC	2 cut(s)	1171, 1203
BpuEI	CTTGAG	1 cut(s)	1055
BpuMI	CCSGG	1 cut(s)	1757
BsaHI	GRCGYC	2 cut(s)	328, 413
BsaJI	CCNNGG	6 cut(s)	444, 514, 515, 1330, 1440, 1660
BsaWI	WCCGGW	1 cut(s)	643
BsaXI	ACNNNNNCTCC	4 cut(s)	789, 819, 1038, 1068
Bsc4I	CCNNNNNNNGG	3 cut(s)	650, 1043, 1176
Bse118I	RCCGGY	1 cut(s)	568
Bse1I	ACTGG	8 cut(s)	104, 139, 611, 666, 1052, 1277, 1603, 1747
Bse3DI	GCAATG	1 cut(s)	1491
BseBI	CCWGG	3 cut(s)	516, 781, 1661
BseDI	CCNNGG	6 cut(s)	444, 514, 515, 1330, 1440, 1660
BseGI	GGATG	5 cut(s)	181, 316, 1549, 1566, 1743
BseLI	CCNNNNNNNGG	3 cut(s)	650, 1043, 1176
BseMI	GCAATG	1 cut(s)	1491
BseMII	CTCAG	2 cut(s)	520, 1718
BseNI	ACTGG	8 cut(s)	104, 139, 611, 666, 1052, 1277, 1603, 1747
BseRI	GAGGAG	2 cut(s)	340, 343
BseXI	GCAGC	6 cut(s)	216, 219, 698, 741, 1269, 1456
BshFI	GGCC	1 cut(s)	180
BshNI	GGYRCC	1 cut(s)	1752
BsiHKAI	GWGCWC	1 cut(s)	1189
BsiHKCI	CYCGRG	1 cut(s)	322
BsiSI	CCGG	3 cut(s)	569, 644, 1757
BslFI	GGGAC	4 cut(s)	114, 497, 913, 1201
BslI	CCNNNNNNNGG	3 cut(s)	650, 1043, 1176
BsmAI	GTCTC	5 cut(s)	277, 319, 352, 509, 1534
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	4 cut(s)	114, 497, 913, 1201
BsmI	GAATGC	1 cut(s)	1797
BsnI	GGCC	1 cut(s)	180
BsoBI	CYCGRG	1 cut(s)	322
Bsp1286I	GDGCHC	1 cut(s)	1189
Bsp143I	GATC	6 cut(s)	91, 495, 919, 1244, 1656, 1818
BspACI	CCGC	1 cut(s)	1038
BspANI	GGCC	1 cut(s)	180
BspCNI	CTCAG	2 cut(s)	519, 1717
BspLI	GGNNCC	7 cut(s)	130, 1117, 1217, 1585, 1754, 1804, 1860
BspMAI	CTGCAG	1 cut(s)	206
BspOI	GCTAGC	1 cut(s)	1688
BspPI	GGATC	2 cut(s)	1252, 1651
BspT107I	GGYRCC	1 cut(s)	1752
BsrDI	GCAATG	1 cut(s)	1491
BsrFI	RCCGGY	1 cut(s)	568
BsrI	ACTGG	8 cut(s)	104, 139, 611, 666, 1052, 1277, 1603, 1747
BssAI	RCCGGY	1 cut(s)	568
BssECI	CCNNGG	6 cut(s)	444, 514, 515, 1330, 1440, 1660
BssMI	GATC	6 cut(s)	91, 495, 919, 1244, 1656, 1818
BssNI	GRCGYC	2 cut(s)	328, 413
BssT1I	CCWWGG	2 cut(s)	1330, 1440
Bst2UI	CCWGG	3 cut(s)	516, 781, 1661
Bst4CI	ACNGT	5 cut(s)	176, 267, 346, 835, 1528
Bst6I	CTCTTC	1 cut(s)	1662
BstACI	GRCGYC	2 cut(s)	328, 413
BstAPI	GCANNNNNTGC	1 cut(s)	582
BstC8I	GCNNGC	2 cut(s)	1185, 1686
BstDEI	CTNAG	3 cut(s)	506, 1704, 1713
BstDSI	CCRYGG	1 cut(s)	444
BstF5I	GGATG	5 cut(s)	181, 316, 1549, 1566, 1743
BstHHI	GCGC	1 cut(s)	1498
BstKTI	GATC	6 cut(s)	94, 498, 922, 1247, 1659, 1821
BstMAI	GTCTC	5 cut(s)	277, 319, 352, 509, 1534
BstMBI	GATC	6 cut(s)	91, 495, 919, 1244, 1656, 1818
BstMWI	GCNNNNNNNGC	4 cut(s)	582, 1485, 1709, 1730
BstNI	CCWGG	3 cut(s)	516, 781, 1661
BstNSI	RCATGY	3 cut(s)	377, 504, 1207
BstSCI	CCNGG	4 cut(s)	514, 779, 1659, 1755
BstSFI	CTRYAG	1 cut(s)	202
BstV1I	GCAGC	6 cut(s)	216, 219, 698, 741, 1269, 1456
BsuRI	GGCC	1 cut(s)	180
BtgI	CCRYGG	1 cut(s)	444
BtsCI	GGATG	5 cut(s)	181, 316, 1549, 1566, 1743
BtsI	GCAGTG	1 cut(s)	583
BtsIMutI	CAGTG	5 cut(s)	172, 514, 583, 1030, 1754
Cac8I	GCNNGC	2 cut(s)	1185, 1686
CaiI	CAGNNNCTG	1 cut(s)	532
CfoI	GCGC	1 cut(s)	1498
Cfr10I	RCCGGY	1 cut(s)	568
Cfr13I	GGNCC	2 cut(s)	128, 1215
CseI	GACGC	1 cut(s)	336
CsiI	ACCWGGT	1 cut(s)	779
Csp6I	GTAC	4 cut(s)	441, 935, 1321, 1753
CspCI	CAANNNNNGTGG	2 cut(s)	816, 851
CviQI	GTAC	4 cut(s)	441, 935, 1321, 1753
DdeI	CTNAG	3 cut(s)	506, 1704, 1713
DpnI	GATC	6 cut(s)	93, 497, 921, 1246, 1658, 1820
DpnII	GATC	6 cut(s)	91, 495, 919, 1244, 1656, 1818
DraI	TTTAAA	1 cut(s)	858
EaeI	YGGCCR	1 cut(s)	178
Eam1104I	CTCTTC	1 cut(s)	1662
EarI	CTCTTC	1 cut(s)	1662
Eco130I	CCWWGG	2 cut(s)	1330, 1440
Eco32I	GATATC	1 cut(s)	1363
Eco47I	GGWCC	2 cut(s)	128, 1215
Eco57I	CTGAAG	2 cut(s)	41, 1521
Eco88I	CYCGRG	1 cut(s)	322
EcoO109I	RGGNCCY	1 cut(s)	1215
EcoRI	GAATTC	1 cut(s)	1128
EcoRII	CCWGG	3 cut(s)	514, 779, 1659
EcoRV	GATATC	1 cut(s)	1363
EcoT14I	CCWWGG	2 cut(s)	1330, 1440
ErhI	CCWWGG	2 cut(s)	1330, 1440
Esp3I	CGTCTC	1 cut(s)	319
FaqI	GGGAC	4 cut(s)	114, 497, 913, 1201
FauI	CCCGC	1 cut(s)	1045
FbaI	TGATCA	3 cut(s)	91, 919, 1818
FblI	GTMKAC	1 cut(s)	154
Fnu4HI	GCNGC	6 cut(s)	205, 208, 712, 730, 1258, 1470
FokI	GGATG	5 cut(s)	168, 323, 1556, 1573, 1730
Fsp4HI	GCNGC	6 cut(s)	205, 208, 712, 730, 1258, 1470
FspBI	CTAG	6 cut(s)	914, 1220, 1239, 1565, 1611, 1685
GlaI	GCGC	1 cut(s)	1497
GluI	GCNGC	6 cut(s)	205, 208, 712, 730, 1258, 1470
HaeIII	GGCC	1 cut(s)	180
HapII	CCGG	3 cut(s)	569, 644, 1757
HgaI	GACGC	1 cut(s)	336
HhaI	GCGC	1 cut(s)	1498
Hin1I	GRCGYC	2 cut(s)	328, 413
Hin6I	GCGC	1 cut(s)	1496
HinP1I	GCGC	1 cut(s)	1496
HincII	GTYRAC	2 cut(s)	828, 1141
HindII	GTYRAC	2 cut(s)	828, 1141
HindIII	AAGCTT	3 cut(s)	233, 1031, 1813
HpaI	GTTAAC	1 cut(s)	1141
HpaII	CCGG	3 cut(s)	569, 644, 1757
HphI	GGTGA	5 cut(s)	205, 1010, 1124, 1319, 1771
Hpy166II	GTNNAC	4 cut(s)	155, 641, 828, 1141
Hpy8I	GTNNAC	4 cut(s)	155, 641, 828, 1141
Hpy99I	CGWCG	1 cut(s)	418
HpyAV	CCTTC	7 cut(s)	179, 341, 995, 1334, 1585, 1779, 1793
HpyCH4III	ACNGT	5 cut(s)	176, 267, 346, 835, 1528
HpyCH4IV	ACGT	3 cut(s)	413, 428, 1143
HpyCH4V	TGCA	3 cut(s)	204, 1287, 1743
HpyF10VI	GCNNNNNNNGC	4 cut(s)	582, 1485, 1709, 1730
HpyF3I	CTNAG	3 cut(s)	506, 1704, 1713
HpySE526I	ACGT	3 cut(s)	413, 428, 1143
Hsp92I	GRCGYC	2 cut(s)	328, 413
HspAI	GCGC	1 cut(s)	1496
KpnI	GGTACC	1 cut(s)	1756
Ksp22I	TGATCA	3 cut(s)	91, 919, 1818
KspAI	GTTAAC	1 cut(s)	1141
Kzo9I	GATC	6 cut(s)	91, 495, 919, 1244, 1656, 1818
LmnI	GCTCC	2 cut(s)	1583, 1681
Lsp1109I	GCAGC	6 cut(s)	216, 219, 698, 741, 1269, 1456
LweI	GCATC	3 cut(s)	1551, 1690, 1752
MabI	ACCWGGT	1 cut(s)	779
MaeI	CTAG	6 cut(s)	914, 1220, 1239, 1565, 1611, 1685
MaeII	ACGT	3 cut(s)	413, 428, 1143
MaeIII	GTNAC	4 cut(s)	538, 722, 1337, 1603
MalI	GATC	6 cut(s)	93, 497, 921, 1246, 1658, 1820
MboI	GATC	6 cut(s)	91, 495, 919, 1244, 1656, 1818
MboII	GAAGA	6 cut(s)	599, 979, 1000, 1417, 1457, 1679
MfeI	CAATTG	2 cut(s)	270, 1725
MhlI	GDGCHC	1 cut(s)	1189
MlsI	TGGCCA	1 cut(s)	180
MluNI	TGGCCA	1 cut(s)	180
MlyI	GAGTC	1 cut(s)	1771
MmeI	TCCRAC	1 cut(s)	1653
Mox20I	TGGCCA	1 cut(s)	180
MroXI	GAANNNNTTC	1 cut(s)	603
MscI	TGGCCA	1 cut(s)	180
MseI	TTAA	9 cut(s)	336, 434, 857, 1104, 1140, 1269, 1398, 1509, 1882
MslI	CAYNNNNRTG	4 cut(s)	218, 224, 797, 1738
Msp20I	TGGCCA	1 cut(s)	180
MspA1I	CMGCKG	2 cut(s)	86, 479
MspI	CCGG	3 cut(s)	569, 644, 1757
MspR9I	CCNGG	4 cut(s)	516, 781, 1661, 1757
MunI	CAATTG	2 cut(s)	270, 1725
Mva1269I	GAATGC	1 cut(s)	1797
MvaI	CCWGG	3 cut(s)	516, 781, 1661
MwoI	GCNNNNNNNGC	4 cut(s)	582, 1485, 1709, 1730
NciI	CCSGG	1 cut(s)	1757
NdeII	GATC	6 cut(s)	91, 495, 919, 1244, 1656, 1818
NheI	GCTAGC	1 cut(s)	1684
NlaIV	GGNNCC	7 cut(s)	130, 1117, 1217, 1585, 1754, 1804, 1860
NmuCI	GTSAC	1 cut(s)	1337
NspI	RCATGY	3 cut(s)	377, 504, 1207
OliI	CACNNNNGTG	1 cut(s)	1738
PasI	CCCWGGG	1 cut(s)	515
PciI	ACATGT	2 cut(s)	373, 500
PcsI	WCGNNNNNNNCGW	1 cut(s)	1180
PctI	GAATGC	1 cut(s)	1797
PdmI	GAANNNNTTC	1 cut(s)	603
PkrI	GCNGC	6 cut(s)	206, 209, 713, 731, 1259, 1471
PleI	GAGTC	1 cut(s)	1770
PpsI	GAGTC	1 cut(s)	1770
PpuMI	RGGWCCY	1 cut(s)	1215
PscI	ACATGT	2 cut(s)	373, 500
Psp5II	RGGWCCY	1 cut(s)	1215
Psp6I	CCWGG	3 cut(s)	514, 779, 1659
PspGI	CCWGG	3 cut(s)	514, 779, 1659
PspN4I	GGNNCC	7 cut(s)	130, 1117, 1217, 1585, 1754, 1804, 1860
PspPI	GGNCC	2 cut(s)	128, 1215
PspPPI	RGGWCCY	1 cut(s)	1215
PstI	CTGCAG	1 cut(s)	206
PstNI	CAGNNNCTG	1 cut(s)	532
PvuII	CAGCTG	2 cut(s)	86, 479
RsaI	GTAC	4 cut(s)	442, 936, 1322, 1754
RsaNI	GTAC	4 cut(s)	441, 935, 1321, 1753
RseI	CAYNNNNRTG	4 cut(s)	218, 224, 797, 1738
SaqAI	TTAA	9 cut(s)	336, 434, 857, 1104, 1140, 1269, 1398, 1509, 1882
SatI	GCNGC	6 cut(s)	205, 208, 712, 730, 1258, 1470
Sau3AI	GATC	6 cut(s)	91, 495, 919, 1244, 1656, 1818
Sau96I	GGNCC	2 cut(s)	128, 1215
SchI	GAGTC	1 cut(s)	1771
ScrFI	CCNGG	4 cut(s)	516, 781, 1661, 1757
SduI	GDGCHC	1 cut(s)	1189
SexAI	ACCWGGT	1 cut(s)	779
SfaNI	GCATC	3 cut(s)	1551, 1690, 1752
SfcI	CTRYAG	1 cut(s)	202
SinI	GGWCC	2 cut(s)	128, 1215
SmiMI	CAYNNNNRTG	4 cut(s)	218, 224, 797, 1738
SmlI	CTYRAG	1 cut(s)	1070
SmoI	CTYRAG	1 cut(s)	1070
SsiI	CCGC	1 cut(s)	1038
SspMI	CTAG	6 cut(s)	914, 1220, 1239, 1565, 1611, 1685
StyD4I	CCNGG	4 cut(s)	514, 779, 1659, 1755
StyI	CCWWGG	2 cut(s)	1330, 1440
TaaI	ACNGT	5 cut(s)	176, 267, 346, 835, 1528
TaiI	ACGT	3 cut(s)	416, 431, 1146
TaqI	TCGA	4 cut(s)	416, 757, 1150, 1317
Tru1I	TTAA	9 cut(s)	336, 434, 857, 1104, 1140, 1269, 1398, 1509, 1882
Tru9I	TTAA	9 cut(s)	336, 434, 857, 1104, 1140, 1269, 1398, 1509, 1882
TscAI	CASTG	5 cut(s)	179, 514, 583, 1030, 1754
TseFI	GTSAC	1 cut(s)	1337
TseI	GCWGC	6 cut(s)	204, 207, 711, 729, 1257, 1469
Tsp45I	GTSAC	1 cut(s)	1337
TspDTI	ATGAA	6 cut(s)	1122, 1212, 1219, 1254, 1604, 1790
TspGWI	ACGGA	3 cut(s)	140, 379, 1824
TspRI	CASTG	5 cut(s)	179, 514, 583, 1030, 1754
VpaK11BI	GGWCC	2 cut(s)	128, 1215
XapI	RAATTY	3 cut(s)	454, 1064, 1128
XbaI	TCTAGA	1 cut(s)	1238
XceI	RCATGY	3 cut(s)	377, 504, 1207
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1480, 1852
XmiI	GTMKAC	1 cut(s)	154
XmnI	GAANNNNTTC	1 cut(s)	603
XspI	CTAG	6 cut(s)	914, 1220, 1239, 1565, 1611, 1685
ZraI	GACGTC	1 cut(s)	414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.