Rorug07G0117300

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000953
Physical Location & Seq
Reverse (-)
9196051 .. 9198789
2739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0117300.1

Sequence Viewer

Length: 1542 bp
ATGGAGCAACCCCCAGCTGTTGCAGCATCGAATCTATTTACATTCGCTTTTCCCTTCGTCTTCTTCACAATCTTCCTCATCAGATGGCTTGTTCCCACTACACCGCCAACCCAGAAATGCTTGCCTCCTTCCCCGCCAGGCCTCCCAATCATAGGGAACCTCCACCAGTTGGGCCGCCTCCCTCACCGGTCCTTACAACTTCTATCCCAGCGCCACGGCCCACTGATGCTGCTTCACTTTGGGGTCAGACCAGTTCTCGTAGTCTCCTCCGCAGACGACGCTCGTGACATCATGAAAACCCACGATCTCATCTTCTCCAACAGACCCAGATTGACAGTCGCTGACAGACTTCTCTACCAAGGCAAAGATGTAGCTTCTGCTCCGTACGGTGAGCATTGGAGGAATGCAAGAAGCATATGTGTTCTTCAGCTGTTGAGTACCAACAAGATTCAGTCTTTTCGCGCCGAAAGAGAGGAAGAAGTAGAGTTGCTTTTACAAGATGTGAAGCGGTCGGCTTCGCTGTCATTGCCTGTGAATCTAAGCGAATTGTTTGCTTCGCTTAGTGCTGATGTGATTTGTAGGGTGGCTTTTGGGAGAAAGTATGGTGGAGTGAAGTTTAAGGAGATGCTTGGGGAGTTTATGAGGTTGTTGGGGGGTTTCTATATGAGGGATTTTGTTCCATGGCTTGGTTGGGTTGATCGCATTAATGGGTCAGATGCGAAAATCGAGAGAGTTGCCAAAGAGTTTGATAGATTTCTGGATGATGTAGTGGAAGAGCATATGAGTGTTTTGAAAATGAAAGAAGAGAATGGAGATAGGAGTGTTGACGATGAAGGTGGAAAGGATTTTGTGGATGTACTACTTGAAGTTCAAAGCTCTGGCACTGATGGCTCTTCAATTGATAGAGATAGCATTAAAGGTATCATCTTGGATATGTTTTCTGGTGGAACTGATACAACCTACACAGTTCTAGAGTGGGCAATGACCGAAATCTTGAGGCATCCCAGAGTTTGTAGAAAAATGCAAAATGAGGTGATGGAGATTGCTAATGGCAAACCACACATCACAGAAAGTGATTTAGATAAAATGCACTACTTGAAAGCAGTGATCAAAGAGACACTTCGGCTACATCCGCCAATACCATTACTCTCCCCTCGTGAATCAACTGAAGATGTTAAGATAATGGAATATGACATAGAAGCAAAAACTATGGTCTTTATCAATGCTTGGGCAATTGGAAGAGACCCAGCAGAGTGGGATGAACCAGAAGAGTTTCGACCGGAGAGATTCATGAATTCTTCTGTGGATTTCAAAGGTCATGACTTTCAATTACTCCCATTTGGAGCTGGTAGAAGGGGCTGCCCAGGAATCTTATTTGCCATGGCTACTAATGAGCTTGTGTTAGCAAATATTGTTCACAAGTTTGACTGGGAATTGCCTGCTGGAACAAGTGCAGATGATATAAACATGACCGAATGCAGCGGTGTTGTTGCCCATAGAAAAGTTCCTCTTGTAGCTGTCGCAAAACCAAGGTTTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

513

Amino Acids

57.97

Weight (kDa)

5.76

Isoelectric Point (pI)

46.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 500 1.3e-104 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 169, 686
AccII CGCG 1 cut(s) 462
AciI CCGC 7 cut(s) 104, 134, 175, 270, 508, 1133, 1482
AcsI RAATTY 1 cut(s) 1294
AcuI CTGAAG 2 cut(s) 410, 1188
AfaI GTAC 3 cut(s) 386, 439, 858
AfiI CCNNNNNNNGG 3 cut(s) 152, 169, 686
AgeI ACCGGT 1 cut(s) 186
AgsI TTSAA 7 cut(s) 793, 866, 872, 897, 1099, 1312, 1328
AjnI CCWGG 2 cut(s) 136, 1363
AluBI AGCT 7 cut(s) 17, 374, 430, 876, 1346, 1396, 1517
AluI AGCT 7 cut(s) 17, 374, 430, 876, 1346, 1396, 1517
Alw26I GTCTC 3 cut(s) 268, 1109, 1236
AlwNI CAGNNNCTG 1 cut(s) 341
AoxI GGCC 3 cut(s) 139, 172, 217
ApeKI GCWGC 4 cut(s) 23, 229, 1359, 1479
ApoI RAATTY 1 cut(s) 1294
AseI ATTAAT 1 cut(s) 705
AsiGI ACCGGT 1 cut(s) 186
Asp700I GAANNNNTTC 1 cut(s) 1272
AspLEI GCGC 2 cut(s) 213, 464
AspS9I GGNCC 3 cut(s) 172, 189, 218
AsuHPI GGTGA 3 cut(s) 176, 401, 1045
AvaII GGWCC 1 cut(s) 189
BauI CACGAG 2 cut(s) 282, 1155
BbsI GAAGAC 1 cut(s) 52
BbvI GCAGC 4 cut(s) 35, 216, 1346, 1491
BccI CCATC 3 cut(s) 78, 881, 1030
BceAI ACGGC 1 cut(s) 232
BcgI CGANNNNNNTGC 4 cut(s) 533, 567, 716, 750
BciT130I CCWGG 2 cut(s) 138, 1365
BclI TGATCA 1 cut(s) 1107
BcoDI GTCTC 3 cut(s) 268, 1109, 1236
BfaI CTAG 2 cut(s) 971, 1540
BfoI RGCGCY 1 cut(s) 214
BisI GCNGC 5 cut(s) 24, 175, 230, 1360, 1480
BlsI GCNGC 5 cut(s) 25, 176, 231, 1361, 1481
Bme1390I CCNGG 2 cut(s) 138, 1365
Bme18I GGWCC 1 cut(s) 189
BmgT120I GGNCC 3 cut(s) 172, 189, 218
BmiI GGNNCC 1 cut(s) 158
BmrFI CCNGG 2 cut(s) 138, 1365
BmrI ACTGGG 1 cut(s) 1438
BmsI GCATC 5 cut(s) 35, 216, 615, 706, 1009
BmuI ACTGGG 1 cut(s) 1438
BpiI GAAGAC 1 cut(s) 52
BpuEI CTTGAG 1 cut(s) 1015
BsaI GGTCTC 1 cut(s) 1236
BsaJI CCNNGG 6 cut(s) 214, 358, 680, 1363, 1380, 1529
BsaWI WCCGGW 2 cut(s) 186, 1279
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 169, 686
Bse118I RCCGGY 1 cut(s) 186
Bse1I ACTGG 3 cut(s) 166, 251, 1433
Bse3DI GCAATG 2 cut(s) 524, 987
BseBI CCWGG 2 cut(s) 138, 1365
BseDI CCNNGG 6 cut(s) 214, 358, 680, 1363, 1380, 1529
BseGI GGATG 5 cut(s) 766, 859, 1000, 1129, 1264
BseLI CCNNNNNNNGG 3 cut(s) 152, 169, 686
BseMI GCAATG 2 cut(s) 524, 987
BseNI ACTGG 3 cut(s) 166, 251, 1433
BseRI GAGGAG 1 cut(s) 256
BseXI GCAGC 4 cut(s) 35, 216, 1346, 1491
BseYI CCCAGC 3 cut(s) 13, 207, 1246
BsgI GTGCAG 1 cut(s) 1473
Bsh1236I CGCG 1 cut(s) 462
Bsh1285I CGRYCG 2 cut(s) 512, 1280
BshFI GGCC 3 cut(s) 141, 174, 219
BshTI ACCGGT 1 cut(s) 186
BsiEI CGRYCG 2 cut(s) 512, 1280
BsiSI CCGG 2 cut(s) 187, 1280
BsiWI CGTACG 1 cut(s) 384
BslI CCNNNNNNNGG 3 cut(s) 152, 169, 686
BsmAI GTCTC 3 cut(s) 268, 1109, 1236
BsmI GAATGC 2 cut(s) 409, 1481
BsnI GGCC 3 cut(s) 141, 174, 219
Bso31I GGTCTC 1 cut(s) 1236
Bsp143I GATC 3 cut(s) 304, 697, 1107
Bsp19I CCATGG 2 cut(s) 680, 1380
BspACI CCGC 7 cut(s) 104, 134, 175, 270, 508, 1133, 1482
BspANI GGCC 3 cut(s) 141, 174, 219
BspFNI CGCG 1 cut(s) 462
BspHI TCATGA 3 cut(s) 291, 1290, 1318
BspLI GGNNCC 1 cut(s) 158
BspQI GCTCTTC 2 cut(s) 768, 898
BspTNI GGTCTC 1 cut(s) 1236
BsrDI GCAATG 2 cut(s) 524, 987
BsrFI RCCGGY 1 cut(s) 186
BsrI ACTGG 3 cut(s) 166, 251, 1433
BssAI RCCGGY 1 cut(s) 186
BssECI CCNNGG 6 cut(s) 214, 358, 680, 1363, 1380, 1529
BssMI GATC 3 cut(s) 304, 697, 1107
BssSI CACGAG 2 cut(s) 282, 1155
BssT1I CCWWGG 4 cut(s) 358, 680, 1380, 1529
Bst2BI CACGAG 2 cut(s) 282, 1155
Bst2UI CCWGG 2 cut(s) 138, 1365
Bst4CI ACNGT 3 cut(s) 337, 389, 967
Bst6I CTCTTC 5 cut(s) 768, 798, 898, 1234, 1263
BstC8I GCNNGC 2 cut(s) 122, 1440
BstDEI CTNAG 2 cut(s) 539, 560
BstDSI CCRYGG 3 cut(s) 214, 680, 1380
BstF5I GGATG 5 cut(s) 766, 859, 1000, 1129, 1264
BstFNI CGCG 1 cut(s) 462
BstH2I RGCGCY 1 cut(s) 214
BstHHI GCGC 2 cut(s) 213, 464
BstKTI GATC 3 cut(s) 307, 700, 1110
BstMAI GTCTC 3 cut(s) 268, 1109, 1236
BstMBI GATC 3 cut(s) 304, 697, 1107
BstMCI CGRYCG 2 cut(s) 512, 1280
BstMWI GCNNNNNNNGC 5 cut(s) 23, 278, 526, 888, 1132
BstNI CCWGG 2 cut(s) 138, 1365
BstSCI CCNGG 2 cut(s) 136, 1363
BstUI CGCG 1 cut(s) 462
BstV1I GCAGC 4 cut(s) 35, 216, 1346, 1491
BstV2I GAAGAC 1 cut(s) 52
BstXI CCANNNNNNTGG 1 cut(s) 1254
BsuRI GGCC 3 cut(s) 141, 174, 219
BtgI CCRYGG 3 cut(s) 214, 680, 1380
BtsCI GGATG 5 cut(s) 766, 859, 1000, 1129, 1264
BtsI GCAGTG 1 cut(s) 1110
BtsIMutI CAGTG 3 cut(s) 221, 882, 1110
Cac8I GCNNGC 2 cut(s) 122, 1440
CaiI CAGNNNCTG 1 cut(s) 341
CciI TCATGA 3 cut(s) 291, 1290, 1318
CfoI GCGC 2 cut(s) 213, 464
Cfr10I RCCGGY 1 cut(s) 186
Cfr13I GGNCC 3 cut(s) 172, 189, 218
CseI GACGC 1 cut(s) 287
Csp6I GTAC 3 cut(s) 385, 438, 857
CspAI ACCGGT 1 cut(s) 186
CviAII CATG 6 cut(s) 292, 681, 1291, 1319, 1381, 1468
CviQI GTAC 3 cut(s) 385, 438, 857
DdeI CTNAG 2 cut(s) 539, 560
DpnI GATC 3 cut(s) 306, 699, 1109
DpnII GATC 3 cut(s) 304, 697, 1107
Eam1104I CTCTTC 5 cut(s) 768, 798, 898, 1234, 1263
EarI CTCTTC 5 cut(s) 768, 798, 898, 1234, 1263
EciI GGCGGA 1 cut(s) 1122
Eco130I CCWWGG 4 cut(s) 358, 680, 1380, 1529
Eco147I AGGCCT 1 cut(s) 141
Eco31I GGTCTC 1 cut(s) 1236
Eco47I GGWCC 1 cut(s) 189
Eco57I CTGAAG 2 cut(s) 410, 1188
EcoRI GAATTC 1 cut(s) 1294
EcoRII CCWGG 2 cut(s) 136, 1363
EcoT14I CCWWGG 4 cut(s) 358, 680, 1380, 1529
ErhI CCWWGG 4 cut(s) 358, 680, 1380, 1529
FaeI CATG 6 cut(s) 295, 684, 1294, 1322, 1384, 1471
FalI AAGNNNNNCTT 4 cut(s) 1104, 1136, 1494, 1526
FatI CATG 6 cut(s) 291, 680, 1290, 1318, 1380, 1467
FauI CCCGC 1 cut(s) 141
FauNDI CATATG 2 cut(s) 416, 780
FbaI TGATCA 1 cut(s) 1107
Fnu4HI GCNGC 5 cut(s) 24, 175, 230, 1360, 1480
FokI GGATG 5 cut(s) 773, 866, 987, 1116, 1271
Fsp4HI GCNGC 5 cut(s) 24, 175, 230, 1360, 1480
FspBI CTAG 2 cut(s) 971, 1540
GlaI GCGC 2 cut(s) 212, 463
GluI GCNGC 5 cut(s) 24, 175, 230, 1360, 1480
GsaI CCCAGC 3 cut(s) 17, 211, 1250
HaeII RGCGCY 1 cut(s) 214
HaeIII GGCC 3 cut(s) 141, 174, 219
HapII CCGG 2 cut(s) 187, 1280
HgaI GACGC 1 cut(s) 287
HhaI GCGC 2 cut(s) 213, 464
Hin1II CATG 6 cut(s) 295, 684, 1294, 1322, 1384, 1471
Hin6I GCGC 2 cut(s) 211, 462
HinP1I GCGC 2 cut(s) 211, 462
HincII GTYRAC 1 cut(s) 826
HindII GTYRAC 1 cut(s) 826
HinfI GANTC 6 cut(s) 31, 448, 535, 1160, 1287, 1368
HpaII CCGG 2 cut(s) 187, 1280
HphI GGTGA 3 cut(s) 176, 401, 1045
Hpy166II GTNNAC 2 cut(s) 826, 1417
Hpy188I TCNGA 3 cut(s) 83, 248, 715
Hpy188III TCNNGA 9 cut(s) 284, 292, 727, 758, 971, 994, 1157, 1291, 1319
Hpy8I GTNNAC 2 cut(s) 826, 1417
Hpy99I CGWCG 1 cut(s) 281
HpyAV CCTTC 4 cut(s) 64, 138, 827, 1347
HpyCH4III ACNGT 3 cut(s) 337, 389, 967
HpyCH4V TGCA 6 cut(s) 23, 407, 1024, 1090, 1454, 1479
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 278, 526, 888, 1132
HpyF3I CTNAG 2 cut(s) 539, 560
Hsp92II CATG 6 cut(s) 295, 684, 1294, 1322, 1384, 1471
HspAI GCGC 2 cut(s) 211, 462
Ksp22I TGATCA 1 cut(s) 1107
Kzo9I GATC 3 cut(s) 304, 697, 1107
LguI GCTCTTC 2 cut(s) 768, 898
LmnI GCTCC 3 cut(s) 4, 385, 1343
Lsp1109I GCAGC 4 cut(s) 35, 216, 1346, 1491
LweI GCATC 5 cut(s) 35, 216, 615, 706, 1009
MaeI CTAG 2 cut(s) 971, 1540
MaeIII GTNAC 1 cut(s) 284
MalI GATC 3 cut(s) 306, 699, 1109
MboI GATC 3 cut(s) 304, 697, 1107
MfeI CAATTG 2 cut(s) 897, 1233
MluCI AATT 6 cut(s) 545, 897, 1233, 1294, 1328, 1433
MmeI TCCRAC 1 cut(s) 342
MroXI GAANNNNTTC 1 cut(s) 1272
MseI TTAA 4 cut(s) 618, 705, 915, 1176
MslI CAYNNNNRTG 1 cut(s) 783
MspA1I CMGCKG 3 cut(s) 17, 430, 1482
MspI CCGG 2 cut(s) 187, 1280
MspR9I CCNGG 2 cut(s) 138, 1365
MunI CAATTG 2 cut(s) 897, 1233
Mva1269I GAATGC 2 cut(s) 409, 1481
MvaI CCWGG 2 cut(s) 138, 1365
MvnI CGCG 1 cut(s) 462
MwoI GCNNNNNNNGC 5 cut(s) 23, 278, 526, 888, 1132
NcoI CCATGG 2 cut(s) 680, 1380
NdeI CATATG 2 cut(s) 416, 780
NdeII GATC 3 cut(s) 304, 697, 1107
NlaIII CATG 6 cut(s) 295, 684, 1294, 1322, 1384, 1471
NlaIV GGNNCC 1 cut(s) 158
NmuCI GTSAC 1 cut(s) 284
PagI TCATGA 3 cut(s) 291, 1290, 1318
PceI AGGCCT 1 cut(s) 141
PciSI GCTCTTC 2 cut(s) 768, 898
PctI GAATGC 2 cut(s) 409, 1481
PdmI GAANNNNTTC 1 cut(s) 1272
PfeI GAWTC 6 cut(s) 31, 448, 535, 1160, 1287, 1368
Pfl23II CGTACG 1 cut(s) 384
PflMI CCANNNNNTGG 2 cut(s) 169, 686
PinAI ACCGGT 1 cut(s) 186
PkrI GCNGC 5 cut(s) 25, 176, 231, 1361, 1481
PshBI ATTAAT 1 cut(s) 705
Psp6I CCWGG 2 cut(s) 136, 1363
PspFI CCCAGC 3 cut(s) 13, 207, 1246
PspGI CCWGG 2 cut(s) 136, 1363
PspLI CGTACG 1 cut(s) 384
PspN4I GGNNCC 1 cut(s) 158
PspPI GGNCC 3 cut(s) 172, 189, 218
PstNI CAGNNNCTG 1 cut(s) 341
PvuII CAGCTG 2 cut(s) 17, 430
RsaI GTAC 3 cut(s) 386, 439, 858
RsaNI GTAC 3 cut(s) 385, 438, 857
RseI CAYNNNNRTG 1 cut(s) 783
SapI GCTCTTC 2 cut(s) 768, 898
SaqAI TTAA 4 cut(s) 618, 705, 915, 1176
SatI GCNGC 5 cut(s) 24, 175, 230, 1360, 1480
Sau3AI GATC 3 cut(s) 304, 697, 1107
Sau96I GGNCC 3 cut(s) 172, 189, 218
ScrFI CCNGG 2 cut(s) 138, 1365
SfaNI GCATC 5 cut(s) 35, 216, 615, 706, 1009
SinI GGWCC 1 cut(s) 189
SmiMI CAYNNNNRTG 1 cut(s) 783
SmlI CTYRAG 1 cut(s) 994
SmoI CTYRAG 1 cut(s) 994
Sse9I AATT 6 cut(s) 545, 897, 1233, 1294, 1328, 1433
SseBI AGGCCT 1 cut(s) 141
SsiI CCGC 7 cut(s) 104, 134, 175, 270, 508, 1133, 1482
SspI AATATT 1 cut(s) 1411
SspMI CTAG 2 cut(s) 971, 1540
StuI AGGCCT 1 cut(s) 141
StyD4I CCNGG 2 cut(s) 136, 1363
StyI CCWWGG 4 cut(s) 358, 680, 1380, 1529
TaaI ACNGT 3 cut(s) 337, 389, 967
TaqI TCGA 3 cut(s) 29, 726, 1276
TaqII GACCGA 2 cut(s) 1001, 1487
TasI AATT 6 cut(s) 545, 897, 1233, 1294, 1328, 1433
TatI WGTACW 1 cut(s) 856
TauI GCSGC 1 cut(s) 177
TfiI GAWTC 6 cut(s) 31, 448, 535, 1160, 1287, 1368
Tru1I TTAA 4 cut(s) 618, 705, 915, 1176
Tru9I TTAA 4 cut(s) 618, 705, 915, 1176
TscAI CASTG 3 cut(s) 228, 889, 1110
TseFI GTSAC 1 cut(s) 284
TseI GCWGC 4 cut(s) 23, 229, 1359, 1479
Tsp45I GTSAC 1 cut(s) 284
TspDTI ATGAA 6 cut(s) 308, 812, 846, 1275, 1279, 1307
TspGWI ACGGA 1 cut(s) 372
TspRI CASTG 3 cut(s) 228, 889, 1110
Van91I CCANNNNNTGG 2 cut(s) 169, 686
VpaK11BI GGWCC 1 cut(s) 189
VspI ATTAAT 1 cut(s) 705
XapI RAATTY 1 cut(s) 1294
XbaI TCTAGA 1 cut(s) 970
XcmI CCANNNNNNNNNTGG 1 cut(s) 687
XmnI GAANNNNTTC 1 cut(s) 1272
XspI CTAG 2 cut(s) 971, 1540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.