Rmu_sc0006661.1_g000005

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006661.1
OG0000953
Physical Location & Seq
Reverse (-)
14381 .. 16395
2015 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006661.1_g000005.1.cds

Sequence Viewer

Length: 1875 bp
atgaatatcctgcctctgcttttcttgcttgtaattgtgttccccagtattgttaaagcaattaccaaagcagtcaatgatcgcaactgcccagttcaaaggtgtaggcatgatggtcctgatatcaagattccattccgtctacaacactatccccttcactgtggccatccagagtttgaggtttcctgcagcagcttcagcaacatgaccatgatgaagctttcctcatcatcaggattctttctaatacaaacaatcgattacgagagtcaacaatttcgtgtgtatgatgaggatggttgcctcccaagacgccttcttaattttactctctccccctcgctctttcaaccagcgtctatggtttaccaaaacgactgcggtccctattccggttacaccttccaagacaatttgaggatcatgacgttgttaaattgtaccacggcacaaaatcttagcgcatccaccatacctaacaccccccactggaagtacatggcgatcaaatgtctcagtgtgccagggcattatcaagttctggctgttaacgaggattttactacgtctgacttgccggtagacagtccttgctctactttgtcagcattctttcttccagttcaacttaatatgtatggttgtgagccagacactggttttttgctggaatggagtgaatggagtttcccagaatgtcaaaactgtagaggaagctgctatttcaattacagcagcaatcaagtcttgaagtgttatgctcccattcccagacaaaaacacaaaggtctatcaactaggtttattgtcatggcagtgagcgtatgtggttttgttcttttgtcaaccacagcggtagccatcttttaccatttaaagcaatcaaagaggagagaggaaaaggaaaatcatagaaagattgaaaagttcctagatgatcacaagtcccatgtacccacaagatactccaatgctgatataaagaagatgacaaatggattcaagaagaagttgggtgaaggaggttttggaagtgttttcagtggaaagcttcccactaatggagttccggtagccataaaagtcctcaaggattctacaggaaatggagatgattttgttaatgaagtgggaaccatcggcagaattcaccatgtaaacgtggttcgactacttgggttttcagctgaaggagggaagcgtgctcttatttatgagctcatgccaaacaggtctctagaggagttcatcaaatctagaggatcaaataagagcagcagttcatttaactgggagaaactttgcaacatcatcacaggtatagcaaagggaattgagtaccttcaccaagggtgtgaccagaggattctccactttgatatcaagcctcacaatatcttgttagaccatgcccttaatccgaaaatttctgattttggtatggctaaactctgttccaaggaagatagtattatatctatgactgctgctagaggcactataggctacattgcacctgaagtatttaatggaaactttggaactgtctcctacaaatcggatgtgtatagtttcgggatgctagttcttgaagttattggagctaggaaggaaactgctgttagtgaaaatgaggtgtattttcctgaattgatttataagtgtctaatccaaggagaagagttggatttggagctggctgataacagagatgctcagattgctaagagattagcaattgtggcactttggtgcatccagtggtacccggtgaatcgcccttccatgaaagcagttgttagaatgctagaaggaccctctgaaagtttgataatgccacccaatccgtttgcttccacaactcagatgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

624

Amino Acids

70.13

Weight (kDa)

8.13

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1662
Acc65I GGTACC 1 cut(s) 1767
AccB1I GGYRCC 1 cut(s) 1767
AccB7I CCANNNNNTGG 1 cut(s) 659
AccI GTMKAC 2 cut(s) 142, 585
AciI CCGC 2 cut(s) 384, 857
AclWI GGATC 2 cut(s) 431, 1273
AcoI YGGCCR 1 cut(s) 166
AcsI RAATTY 2 cut(s) 1149, 1428
AcuI CTGAAG 3 cut(s) 184, 1212, 1542
AcyI GRCGYC 1 cut(s) 316
AfaI GTAC 5 cut(s) 445, 500, 957, 1343, 1769
AfiI CCNNNNNNNGG 4 cut(s) 395, 492, 659, 1064
AgsI TTSAA 8 cut(s) 98, 353, 629, 730, 754, 926, 1006, 1595
AjnI CCWGG 1 cut(s) 526
AjuI GAANNNNNNNTTGG 2 cut(s) 1014, 1046
AleI CACNNNNGTG 1 cut(s) 1753
AluBI AGCT 8 cut(s) 198, 223, 720, 1054, 1190, 1222, 1607, 1699
AluI AGCT 8 cut(s) 198, 223, 720, 1054, 1190, 1222, 1607, 1699
Alw21I GWGCWC 2 cut(s) 1210, 1224
Alw26I GTCTC 3 cut(s) 521, 1242, 1555
AlwI GGATC 2 cut(s) 431, 1273
AlwNI CAGNNNCTG 1 cut(s) 659
AoxI GGCC 1 cut(s) 166
ApeKI GCWGC 6 cut(s) 192, 195, 720, 738, 1278, 1490
ApoI RAATTY 2 cut(s) 1149, 1428
Asp718I GGTACC 1 cut(s) 1767
AspLEI GCGC 1 cut(s) 467
AspS9I GGNCC 3 cut(s) 116, 386, 1817
AsuC2I CCSGG 1 cut(s) 1772
AsuHPI GGTGA 4 cut(s) 1031, 1145, 1340, 1786
AvaII GGWCC 3 cut(s) 116, 386, 1817
BalI TGGCCA 1 cut(s) 168
BanI GGYRCC 1 cut(s) 1767
BanII GRGCYC 1 cut(s) 1224
Bbv12I GWGCWC 2 cut(s) 1210, 1224
BbvI GCAGC 6 cut(s) 204, 207, 707, 750, 1290, 1477
BccI CCATC 5 cut(s) 107, 177, 293, 872, 1148
BceAI ACGGC 1 cut(s) 465
BciT130I CCWGG 1 cut(s) 528
BclI TGATCA 1 cut(s) 940
BcnI CCSGG 1 cut(s) 1772
BcoDI GTCTC 3 cut(s) 521, 1242, 1555
BfaI CTAG 8 cut(s) 801, 935, 1241, 1260, 1494, 1586, 1608, 1811
BfmI CTRYAG 4 cut(s) 190, 709, 1101, 1503
BisI GCNGC 6 cut(s) 193, 196, 721, 739, 1279, 1491
BlsI GCNGC 6 cut(s) 194, 197, 722, 740, 1280, 1492
Bme1390I CCNGG 2 cut(s) 528, 1772
Bme18I GGWCC 3 cut(s) 116, 386, 1817
BmgT120I GGNCC 3 cut(s) 116, 386, 1817
BmiI GGNNCC 4 cut(s) 388, 1138, 1769, 1819
BmrFI CCNGG 2 cut(s) 528, 1772
BmrI ACTGGG 3 cut(s) 39, 86, 1303
BmsI GCATC 4 cut(s) 476, 1572, 1705, 1767
BmuI ACTGGG 3 cut(s) 39, 86, 1303
BoxI GACNNNNGTC 1 cut(s) 384
BpuEI CTTGAG 1 cut(s) 1076
BpuMI CCSGG 1 cut(s) 1772
Bsa29I ATCGAT 1 cut(s) 261
BsaHI GRCGYC 1 cut(s) 316
BsaI GGTCTC 1 cut(s) 1242
BsaJI CCNNGG 5 cut(s) 447, 527, 1351, 1461, 1675
BsaWI WCCGGW 2 cut(s) 395, 1072
BsaXI ACNNNNNCTCC 2 cut(s) 1059, 1089
Bsc4I CCNNNNNNNGG 4 cut(s) 395, 492, 659, 1064
Bse118I RCCGGY 1 cut(s) 580
Bse1I ACTGG 7 cut(s) 45, 92, 497, 623, 664, 1298, 1762
Bse3DI GCAATG 1 cut(s) 1512
BseBI CCWGG 1 cut(s) 528
BseCI ATCGAT 1 cut(s) 261
BseDI CCNNGG 5 cut(s) 447, 527, 1351, 1461, 1675
BseGI GGATG 6 cut(s) 169, 304, 467, 1570, 1587, 1758
BseLI CCNNNNNNNGG 4 cut(s) 395, 492, 659, 1064
BseMI GCAATG 1 cut(s) 1512
BseMII CTCAG 2 cut(s) 532, 1733
BseNI ACTGG 7 cut(s) 45, 92, 497, 623, 664, 1298, 1762
BseRI GAGGAG 2 cut(s) 907, 1259
BseXI GCAGC 6 cut(s) 204, 207, 707, 750, 1290, 1477
BshFI GGCC 1 cut(s) 168
BshNI GGYRCC 1 cut(s) 1767
BshVI ATCGAT 1 cut(s) 261
BsiHKAI GWGCWC 2 cut(s) 1210, 1224
BsiSI CCGG 4 cut(s) 396, 581, 1073, 1772
BslFI GGGAC 2 cut(s) 372, 934
BslI CCNNNNNNNGG 4 cut(s) 395, 492, 659, 1064
BsmAI GTCTC 3 cut(s) 521, 1242, 1555
BsmFI GGGAC 2 cut(s) 372, 934
BsmI GAATGC 2 cut(s) 611, 1812
BsnI GGCC 1 cut(s) 168
Bso31I GGTCTC 1 cut(s) 1242
Bsp1286I GDGCHC 2 cut(s) 1210, 1224
Bsp143I GATC 5 cut(s) 79, 423, 507, 940, 1265
BspACI CCGC 2 cut(s) 384, 857
BspANI GGCC 1 cut(s) 168
BspCNI CTCAG 2 cut(s) 531, 1732
BspDI ATCGAT 1 cut(s) 261
BspHI TCATGA 1 cut(s) 426
BspLI GGNNCC 4 cut(s) 388, 1138, 1769, 1819
BspMAI CTGCAG 1 cut(s) 194
BspPI GGATC 2 cut(s) 431, 1273
BspT107I GGYRCC 1 cut(s) 1767
BspTNI GGTCTC 1 cut(s) 1242
BsrDI GCAATG 1 cut(s) 1512
BsrFI RCCGGY 1 cut(s) 580
BsrI ACTGG 7 cut(s) 45, 92, 497, 623, 664, 1298, 1762
BssAI RCCGGY 1 cut(s) 580
BssECI CCNNGG 5 cut(s) 447, 527, 1351, 1461, 1675
BssMI GATC 5 cut(s) 79, 423, 507, 940, 1265
BssNI GRCGYC 1 cut(s) 316
BssT1I CCWWGG 3 cut(s) 1351, 1461, 1675
Bst2UI CCWGG 1 cut(s) 528
Bst4CI ACNGT 4 cut(s) 164, 590, 710, 1549
Bst6I CTCTTC 1 cut(s) 1677
BstACI GRCGYC 1 cut(s) 316
BstC8I GCNNGC 2 cut(s) 1206, 1701
BstDEI CTNAG 5 cut(s) 461, 518, 1719, 1728, 1866
BstDSI CCRYGG 1 cut(s) 447
BstF5I GGATG 6 cut(s) 169, 304, 467, 1570, 1587, 1758
BstHHI GCGC 1 cut(s) 467
BstKTI GATC 5 cut(s) 82, 426, 510, 943, 1268
BstMAI GTCTC 3 cut(s) 521, 1242, 1555
BstMBI GATC 5 cut(s) 79, 423, 507, 940, 1265
BstMWI GCNNNNNNNGC 5 cut(s) 25, 201, 1506, 1724, 1745
BstNI CCWGG 1 cut(s) 528
BstPAI GACNNNNGTC 1 cut(s) 384
BstSCI CCNGG 2 cut(s) 526, 1770
BstSFI CTRYAG 4 cut(s) 190, 709, 1101, 1503
BstV1I GCAGC 6 cut(s) 204, 207, 707, 750, 1290, 1477
Bsu15I ATCGAT 1 cut(s) 261
BsuRI GGCC 1 cut(s) 168
BsuTUI ATCGAT 1 cut(s) 261
BtgI CCRYGG 1 cut(s) 447
BtsCI GGATG 6 cut(s) 169, 304, 467, 1570, 1587, 1758
BtsI GCAGTG 1 cut(s) 825
BtsIMutI CAGTG 7 cut(s) 160, 490, 526, 657, 825, 1051, 1769
Cac8I GCNNGC 2 cut(s) 1206, 1701
CaiI CAGNNNCTG 1 cut(s) 659
CciI TCATGA 1 cut(s) 426
CfoI GCGC 1 cut(s) 467
Cfr10I RCCGGY 1 cut(s) 580
Cfr13I GGNCC 3 cut(s) 116, 386, 1817
ClaI ATCGAT 1 cut(s) 261
CseI GACGC 2 cut(s) 324, 348
Csp6I GTAC 5 cut(s) 444, 499, 956, 1342, 1768
CviQI GTAC 5 cut(s) 444, 499, 956, 1342, 1768
DdeI CTNAG 5 cut(s) 461, 518, 1719, 1728, 1866
DpnI GATC 5 cut(s) 81, 425, 509, 942, 1267
DpnII GATC 5 cut(s) 79, 423, 507, 940, 1265
DraI TTTAAA 1 cut(s) 879
EaeI YGGCCR 1 cut(s) 166
Eam1104I CTCTTC 1 cut(s) 1677
EarI CTCTTC 1 cut(s) 1677
Ecl136II GAGCTC 1 cut(s) 1222
Eco130I CCWWGG 3 cut(s) 1351, 1461, 1675
Eco24I GRGCYC 1 cut(s) 1224
Eco31I GGTCTC 1 cut(s) 1242
Eco32I GATATC 2 cut(s) 124, 1384
Eco47I GGWCC 3 cut(s) 116, 386, 1817
Eco53kI GAGCTC 1 cut(s) 1222
Eco57I CTGAAG 3 cut(s) 184, 1212, 1542
EcoICRI GAGCTC 1 cut(s) 1222
EcoO109I RGGNCCY 1 cut(s) 1817
EcoRI GAATTC 1 cut(s) 1149
EcoRII CCWGG 1 cut(s) 526
EcoRV GATATC 2 cut(s) 124, 1384
EcoT14I CCWWGG 3 cut(s) 1351, 1461, 1675
EcoT38I GRGCYC 1 cut(s) 1224
ErhI CCWWGG 3 cut(s) 1351, 1461, 1675
FaqI GGGAC 2 cut(s) 372, 934
FbaI TGATCA 1 cut(s) 940
FblI GTMKAC 2 cut(s) 142, 585
Fnu4HI GCNGC 6 cut(s) 193, 196, 721, 739, 1279, 1491
FokI GGATG 6 cut(s) 156, 311, 454, 1577, 1594, 1745
FriOI GRGCYC 1 cut(s) 1224
Fsp4HI GCNGC 6 cut(s) 193, 196, 721, 739, 1279, 1491
FspBI CTAG 8 cut(s) 801, 935, 1241, 1260, 1494, 1586, 1608, 1811
GlaI GCGC 1 cut(s) 466
GluI GCNGC 6 cut(s) 193, 196, 721, 739, 1279, 1491
HaeIII GGCC 1 cut(s) 168
HapII CCGG 4 cut(s) 396, 581, 1073, 1772
HgaI GACGC 2 cut(s) 324, 348
HhaI GCGC 1 cut(s) 467
Hin1I GRCGYC 1 cut(s) 316
Hin6I GCGC 1 cut(s) 465
HinP1I GCGC 1 cut(s) 465
HincII GTYRAC 3 cut(s) 275, 553, 849
HindII GTYRAC 3 cut(s) 275, 553, 849
HindIII AAGCTT 2 cut(s) 221, 1052
HinfI GANTC 7 cut(s) 130, 240, 271, 1002, 1097, 1369, 1777
HpaI GTTAAC 1 cut(s) 553
HpaII CCGG 4 cut(s) 396, 581, 1073, 1772
HphI GGTGA 4 cut(s) 1031, 1145, 1340, 1786
Hpy166II GTNNAC 7 cut(s) 143, 275, 370, 553, 586, 849, 1162
Hpy188I TCNGA 7 cut(s) 574, 1425, 1435, 1564, 1722, 1825, 1869
Hpy8I GTNNAC 7 cut(s) 143, 275, 370, 553, 586, 849, 1162
HpyAV CCTTC 9 cut(s) 167, 329, 415, 1016, 1187, 1355, 1606, 1794, 1808
HpyCH4III ACNGT 4 cut(s) 164, 590, 710, 1549
HpyCH4IV ACGT 3 cut(s) 431, 569, 1164
HpyCH4V TGCA 4 cut(s) 192, 1308, 1517, 1758
HpyF10VI GCNNNNNNNGC 5 cut(s) 25, 201, 1506, 1724, 1745
HpyF3I CTNAG 5 cut(s) 461, 518, 1719, 1728, 1866
HpySE526I ACGT 3 cut(s) 431, 569, 1164
Hsp92I GRCGYC 1 cut(s) 316
HspAI GCGC 1 cut(s) 465
KpnI GGTACC 1 cut(s) 1771
Ksp22I TGATCA 1 cut(s) 940
KspAI GTTAAC 1 cut(s) 553
Kzo9I GATC 5 cut(s) 79, 423, 507, 940, 1265
LmnI GCTCC 3 cut(s) 769, 1604, 1696
Lsp1109I GCAGC 6 cut(s) 204, 207, 707, 750, 1290, 1477
LweI GCATC 4 cut(s) 476, 1572, 1705, 1767
MaeI CTAG 8 cut(s) 801, 935, 1241, 1260, 1494, 1586, 1608, 1811
MaeII ACGT 3 cut(s) 431, 569, 1164
MaeIII GTNAC 2 cut(s) 398, 1358
MalI GATC 5 cut(s) 81, 425, 509, 942, 1267
MboI GATC 5 cut(s) 79, 423, 507, 940, 1265
MboII GAAGA 5 cut(s) 611, 1000, 1021, 1478, 1694
MfeI CAATTG 1 cut(s) 1740
MhlI GDGCHC 2 cut(s) 1210, 1224
MlsI TGGCCA 1 cut(s) 168
MluNI TGGCCA 1 cut(s) 168
MlyI GAGTC 1 cut(s) 280
MmeI TCCRAC 1 cut(s) 1668
Mox20I TGGCCA 1 cut(s) 168
MscI TGGCCA 1 cut(s) 168
MslI CAYNNNNRTG 3 cut(s) 212, 818, 1753
Msp20I TGGCCA 1 cut(s) 168
MspA1I CMGCKG 2 cut(s) 857, 1190
MspI CCGG 4 cut(s) 396, 581, 1073, 1772
MspR9I CCNGG 2 cut(s) 528, 1772
MunI CAATTG 1 cut(s) 1740
Mva1269I GAATGC 2 cut(s) 611, 1812
MvaI CCWGG 1 cut(s) 528
MwoI GCNNNNNNNGC 5 cut(s) 25, 201, 1506, 1724, 1745
NciI CCSGG 1 cut(s) 1772
NdeII GATC 5 cut(s) 79, 423, 507, 940, 1265
NlaIV GGNNCC 4 cut(s) 388, 1138, 1769, 1819
NmuCI GTSAC 1 cut(s) 1358
OliI CACNNNNGTG 1 cut(s) 1753
PagI TCATGA 1 cut(s) 426
PctI GAATGC 2 cut(s) 611, 1812
PfeI GAWTC 6 cut(s) 130, 240, 1002, 1097, 1369, 1777
PflMI CCANNNNNTGG 1 cut(s) 659
PkrI GCNGC 6 cut(s) 194, 197, 722, 740, 1280, 1492
PleI GAGTC 1 cut(s) 279
PpsI GAGTC 1 cut(s) 279
PpuMI RGGWCCY 1 cut(s) 1817
PshAI GACNNNNGTC 1 cut(s) 384
PsiI TTATAA 1 cut(s) 1662
Psp124BI GAGCTC 1 cut(s) 1224
Psp5II RGGWCCY 1 cut(s) 1817
Psp6I CCWGG 1 cut(s) 526
PspGI CCWGG 1 cut(s) 526
PspN4I GGNNCC 4 cut(s) 388, 1138, 1769, 1819
PspPI GGNCC 3 cut(s) 116, 386, 1817
PspPPI RGGWCCY 1 cut(s) 1817
PsrI GAACNNNNNNTAC 2 cut(s) 1152, 1184
PstI CTGCAG 1 cut(s) 194
PstNI CAGNNNCTG 1 cut(s) 659
PvuII CAGCTG 1 cut(s) 1190
RsaI GTAC 5 cut(s) 445, 500, 957, 1343, 1769
RsaNI GTAC 5 cut(s) 444, 499, 956, 1342, 1768
RseI CAYNNNNRTG 3 cut(s) 212, 818, 1753
SacI GAGCTC 1 cut(s) 1224
SatI GCNGC 6 cut(s) 193, 196, 721, 739, 1279, 1491
Sau3AI GATC 5 cut(s) 79, 423, 507, 940, 1265
Sau96I GGNCC 3 cut(s) 116, 386, 1817
SchI GAGTC 1 cut(s) 280
ScrFI CCNGG 2 cut(s) 528, 1772
SduI GDGCHC 2 cut(s) 1210, 1224
SfaNI GCATC 4 cut(s) 476, 1572, 1705, 1767
SfcI CTRYAG 4 cut(s) 190, 709, 1101, 1503
SinI GGWCC 3 cut(s) 116, 386, 1817
SmiMI CAYNNNNRTG 3 cut(s) 212, 818, 1753
SmlI CTYRAG 1 cut(s) 1091
SmoI CTYRAG 1 cut(s) 1091
SsiI CCGC 2 cut(s) 384, 857
SspMI CTAG 8 cut(s) 801, 935, 1241, 1260, 1494, 1586, 1608, 1811
SstI GAGCTC 1 cut(s) 1224
StyD4I CCNGG 2 cut(s) 526, 1770
StyI CCWWGG 3 cut(s) 1351, 1461, 1675
TaaI ACNGT 4 cut(s) 164, 590, 710, 1549
TaiI ACGT 3 cut(s) 434, 572, 1167
TaqI TCGA 2 cut(s) 261, 1171
TatI WGTACW 1 cut(s) 498
TfiI GAWTC 6 cut(s) 130, 240, 1002, 1097, 1369, 1777
TscAI CASTG 7 cut(s) 167, 497, 526, 664, 825, 1051, 1769
TseFI GTSAC 1 cut(s) 1358
TseI GCWGC 6 cut(s) 192, 195, 720, 738, 1278, 1490
Tsp45I GTSAC 1 cut(s) 1358
TspDTI ATGAA 6 cut(s) 17, 233, 1143, 1240, 1275, 1805
TspGWI ACGGA 2 cut(s) 128, 1839
TspRI CASTG 7 cut(s) 167, 497, 526, 664, 825, 1051, 1769
Van91I CCANNNNNTGG 1 cut(s) 659
VpaK11BI GGWCC 3 cut(s) 116, 386, 1817
XapI RAATTY 2 cut(s) 1149, 1428
XbaI TCTAGA 2 cut(s) 1240, 1259
XmiI GTMKAC 2 cut(s) 142, 585
XspI CTAG 8 cut(s) 801, 935, 1241, 1260, 1494, 1586, 1608, 1811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.