Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0000953

Physical Location & Seq

Genomic Coordinates Reverse (-)

48605201 .. 48607222

Gene Structure 2022 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025837

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGAATATCCTGCCTCTGCTTTTCTTGCTTGTAATTGTGTTCCCCAGTATTGTTAAACCAATTAGCAAAGCAGCCGATGATCAGGCCTGCCCAGTTCAAAGGTGTAGGCATGATGGTCCCCTTATCCAGTTTCCATTCCGTCTACAACACTATCCCCTTCACTGTGGCCATCCAGAGTTTGAGGTTTCCTGCAGCAGCTTCACCAACATGACCATGATGAAGCTTTCCCCATCATCAGGATTCTTTCCAATACAAACAATCGATTACGAGATTCAACAGTTTCGTGTGTATGATGAGGATGGTTGCCTCCCGAGACGCCTTCTTAATTTTACTCTCTCCTTCTCGCTCTTTCAACCACCATCAGATTTGTTTTACGGCTATTGTTTCGGTTACAACTTGATGTTGTTAAATTGTACCCAGGCACAAAATTTGAGCGCATCCACCACAACACCTGACTACCCCATAGCGATCACATGTCTCAGTGTCCCAGGGCAATATCAAATTCTGGCTGTTCCCGAGAATTTTCCTTTGTCTGACTTGCCGGTAGACAGTCATTGCTCTACTCTGTCAGAACTACCCTTTCTTCCATTTCAAAACACACACAGAGATGTGTGTGAACCAGACACTGGTTTATTGCTGGAATGGAGTGAATCGGATTTCCCAGAATGTCAAAACTGTAGAGGAATCTGCTATTTCAATTACAGCAGCAATCAAGTCTTGAAGTGTTATCCTCCCATTCCCAGTCCCATACAAAAACACAAAGGTCTATCAACTAGGTTTATTGTCATGGGAGTGAGTGTATGTGGGTTTGTTGTCCTGTCAACTACGGCGGTAGCCATCTTTTACCATTTAAAGCAATCAATAAAGAGGAAAGAGGAAAAGGAGAATCAAAGAAAGATTGAAAAGTTCCTAGATGATCACAAGTCCCATGTACCAACAAGATACTCCTATGCTGATATAAAGAAAATGACAAGAGGATTCACGAAGAAGTTAGGTGAAGGAGGTTTTGGAAGTGTTTTCAGTGGAAAGCTTCCCAGTAATGGAGTGCCAGTTGCTGTAAAAGTCCTCAAGGATTCTAAAGGAAGTGGAGAAGATTTTGTTAACGAAGTGGGAACCATTGGCAGGATTCACCATGTTAACGTGGTTCGACTACTTGGCTTTTCAGCTGAAGGAGGGAAGCGTGCTCTTATTTATGAGCTCATGCCAAACAGGTCCCTAGAGAAGTTCATCAAATCTAGAGGATCAAATAATAGCAGCAGTTCATTTAACTGGGAGAAACTTTGCAACATCATCACAGGTATAGCAAAGGGAATCGAGTACCTTCACCAAGGGTGTGACCAGAGGATTCTCCACTTTGATATCAAGCCTCACAATATCTTGTTAGACCATGCCTTTAATCCGAAAATTTCTGATTTTGGTATGGCTAAACTCTGTTCCAAGGAAGATAGTGTTATATCTATGACTGCTGCCAGAGGCACCGTGGGCTACATTGCGCCTGAAGTATTTAATGGCAACTTTGGAACTGTCTCCTACAAATCGGATGTGTATAGTTTCGGGATGCTAGTTCTTGAAGTTATTGGAGCCATGAAGGAAACTGGTCTTACATCTAGCGACAATGAGGTGTATTTTCCGGAATTGATTTATAGGTGTCTGATCCAAGGAGAAGAGTTGGATTTGAAGCTAGCTGATGATGGAGATGCTCAGATTGCTAAGAGATTAGCAATTGTGGCACTTTGGTGCATCCAGTGGTACCCGGTGAGTCGCCCTTCCATGAAAGCAGTTGTTAGAATGCTGGAAGGAACCTTTGAAAGCTTGATCATGCCACCCAATCCGTTTGCTTCCACAACTCAGATGGAACCAACAACAACCCCATCAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015695 GO:0015696 GO:0015837 GO:0015843 GO:0016020 GO:0016021 GO:0019755 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

627

Amino Acids

70.04

Weight (kDa)

6.6

Isoelectric Point (pI)

41.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	30 - 98	4e-13	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	327 - 598	9.8e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	328 - 596	2.6e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000953)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01480 FvH4_6g01500 FvH4_6g01501
malus_domestica	MD04G1233200.v1.1 MD12G1250800.v1.1 MD12G1251200.v1.1
prunus_persica	Prupe.6G352900_v2.0.a1 Prupe.6G352900_v2.0.a1
pyrus_communis	pycom04g20660 pycom04g20720 pycom12g23110
rosa_chinensis	RchiOBHm_Chr3g0449111 RchiOBHm_Chr3g0449121 RchiOBHm_Chr3g0449341 RchiOBHm_Chr3g0449371 RchiOBHm_Chr3g0449391 RchiOBHm_Chr7g0209911
rosa_laevigata	RLG00000025835 RLG00000025837 RLG00000025851 RLG00000025852
rosa_multiflora	Rmu_sc0001234.1_g000001 Rmu_sc0001234.1_g000005 Rmu_sc0001234.1_g000007 Rmu_sc0001234.1_g000011 Rmu_sc0003776.1_g000032 Rmu_sc0004874.1_g000012 Rmu_sc0004874.1_g000015 Rmu_sc0006661.1_g000002 Rmu_sc0006661.1_g000003 Rmu_sc0006661.1_g000005 Rmu_sc0017357.1_g000001 Rmu_sc0028145.1_g000001 Rmu_sc0032682.1_g000001 Rmu_ssc0000423.1_g000002
rosa_roxburghii	Rroxscaffold_3G00248810 Rroxscaffold_6G00427210 Rroxscaffold_6G00427350
rosa_rugosa	Rorug02G0618000 Rorug02G0618300 Rorug02G0618400.1 Rorug02G0619900 Rorug02G0620300 Rorug06G0099800 Rorug06G0099800 Rorug07G0117300
rosa_samantha	Rh3AG017800 Rh3AG018000 Rh3BG016800 Rh3BG018100 Rh3BG018300 Rh3CG015900 Rh3CG017000 Rh3CG017200 Rh3DG017100 Rh3DG018300 Rh3DG018700 Rh7BG245800
rosa_wichuraiana	Rw3G001250 Rw3G001380 Rw3G001410 Rw3G001420 Rw3G001440 Rw7G021310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1749
AccB1I	GGYRCC	2 cut(s)	1475, 1749
AccB7I	CCANNNNNTGG	1 cut(s)	626
AccI	GTMKAC	2 cut(s)	142, 546
AccIII	TCCGGA	1 cut(s)	1630
AciI	CCGC	1 cut(s)	830
AclWI	GGATC	2 cut(s)	1249, 1648
AcoI	YGGCCR	1 cut(s)	166
AcsI	RAATTY	4 cut(s)	427, 501, 520, 1404
AcuI	CTGAAG	2 cut(s)	1188, 1518
AcyI	GRCGYC	1 cut(s)	316
AfaI	GTAC	4 cut(s)	415, 933, 1319, 1751
AfiI	CCNNNNNNNGG	4 cut(s)	236, 626, 1040, 1122
AflIII	ACRYGT	1 cut(s)	473
AjnI	CCWGG	2 cut(s)	417, 487
AjuI	GAANNNNNNNTTGG	2 cut(s)	990, 1022
AleI	CACNNNNGTG	1 cut(s)	1735
AluBI	AGCT	8 cut(s)	198, 223, 1030, 1166, 1198, 1681, 1685, 1812
AluI	AGCT	8 cut(s)	198, 223, 1030, 1166, 1198, 1681, 1685, 1812
Alw21I	GWGCWC	2 cut(s)	1186, 1200
Alw26I	GTCTC	3 cut(s)	307, 482, 1531
AlwI	GGATC	2 cut(s)	1249, 1648
AlwNI	CAGNNNCTG	2 cut(s)	626, 1055
Ama87I	CYCGRG	2 cut(s)	310, 515
Aor13HI	TCCGGA	1 cut(s)	1630
AoxI	GGCC	2 cut(s)	84, 166
ApeKI	GCWGC	6 cut(s)	71, 192, 195, 705, 1254, 1466
ApoI	RAATTY	4 cut(s)	427, 501, 520, 1404
Asp718I	GGTACC	1 cut(s)	1749
AspLEI	GCGC	2 cut(s)	437, 1495
AspS9I	GGNCC	2 cut(s)	116, 1212
AsuC2I	CCSGG	1 cut(s)	1754
AsuHPI	GGTGA	5 cut(s)	193, 1007, 1121, 1316, 1768
AsuNHI	GCTAGC	1 cut(s)	1681
AvaI	CYCGRG	2 cut(s)	310, 515
AvaII	GGWCC	2 cut(s)	116, 1212
BalI	TGGCCA	1 cut(s)	168
BanI	GGYRCC	2 cut(s)	1475, 1749
BanII	GRGCYC	1 cut(s)	1200
Bbv12I	GWGCWC	2 cut(s)	1186, 1200
BbvI	GCAGC	6 cut(s)	83, 204, 207, 717, 1266, 1453
BccI	CCATC	9 cut(s)	107, 177, 238, 293, 367, 845, 1685, 1846, 1879
BceAI	ACGGC	2 cut(s)	391, 843
BciT130I	CCWGG	2 cut(s)	419, 489
BclI	TGATCA	3 cut(s)	79, 916, 1815
BcnI	CCSGG	1 cut(s)	1754
BcoDI	GTCTC	3 cut(s)	307, 482, 1531
BfaI	CTAG	7 cut(s)	774, 911, 1217, 1236, 1562, 1608, 1682
BfmI	CTRYAG	2 cut(s)	190, 676
BisI	GCNGC	6 cut(s)	72, 193, 196, 706, 1255, 1467
BlsI	GCNGC	6 cut(s)	73, 194, 197, 707, 1256, 1468
Bme1390I	CCNGG	3 cut(s)	419, 489, 1754
Bme18I	GGWCC	2 cut(s)	116, 1212
BmeT110I	CYCGRG	2 cut(s)	310, 515
BmgT120I	GGNCC	2 cut(s)	116, 1212
BmiI	GGNNCC	8 cut(s)	118, 1114, 1214, 1477, 1582, 1751, 1801, 1857
BmrFI	CCNGG	3 cut(s)	419, 489, 1754
BmrI	ACTGGG	5 cut(s)	39, 86, 735, 1029, 1279
BmsI	GCATC	4 cut(s)	446, 1548, 1687, 1749
BmtI	GCTAGC	1 cut(s)	1685
BmuI	ACTGGG	5 cut(s)	39, 86, 735, 1029, 1279
BpuEI	CTTGAG	1 cut(s)	1052
BpuMI	CCSGG	1 cut(s)	1754
Bsa29I	ATCGAT	1 cut(s)	261
BsaHI	GRCGYC	1 cut(s)	316
BsaJI	CCNNGG	7 cut(s)	417, 487, 488, 1327, 1437, 1479, 1657
BsaWI	WCCGGW	1 cut(s)	1630
BsaXI	ACNNNNNCTCC	4 cut(s)	783, 813, 1035, 1065
Bsc4I	CCNNNNNNNGG	4 cut(s)	236, 626, 1040, 1122
Bse118I	RCCGGY	1 cut(s)	541
Bse3DI	GCAATG	2 cut(s)	553, 1488
BseAI	TCCGGA	1 cut(s)	1630
BseBI	CCWGG	2 cut(s)	419, 489
BseCI	ATCGAT	1 cut(s)	261
BseDI	CCNNGG	7 cut(s)	417, 487, 488, 1327, 1437, 1479, 1657
BseGI	GGATG	6 cut(s)	169, 304, 437, 1546, 1563, 1740
BseLI	CCNNNNNNNGG	4 cut(s)	236, 626, 1040, 1122
BseMI	GCAATG	2 cut(s)	553, 1488
BseMII	CTCAG	3 cut(s)	493, 1715, 1862
BseXI	GCAGC	6 cut(s)	83, 204, 207, 717, 1266, 1453
BshFI	GGCC	2 cut(s)	86, 168
BshNI	GGYRCC	2 cut(s)	1475, 1749
BshVI	ATCGAT	1 cut(s)	261
BsiHKAI	GWGCWC	2 cut(s)	1186, 1200
BsiHKCI	CYCGRG	2 cut(s)	310, 515
BsiSI	CCGG	3 cut(s)	542, 1631, 1754
BslFI	GGGAC	5 cut(s)	102, 470, 729, 910, 1198
BslI	CCNNNNNNNGG	4 cut(s)	236, 626, 1040, 1122
BsmAI	GTCTC	3 cut(s)	307, 482, 1531
BsmBI	CGTCTC	1 cut(s)	307
BsmFI	GGGAC	5 cut(s)	102, 470, 729, 910, 1198
BsmI	GAATGC	1 cut(s)	1794
BsnI	GGCC	2 cut(s)	86, 168
BsoBI	CYCGRG	2 cut(s)	310, 515
Bsp1286I	GDGCHC	2 cut(s)	1186, 1200
Bsp13I	TCCGGA	1 cut(s)	1630
Bsp143I	GATC	6 cut(s)	79, 468, 916, 1241, 1653, 1815
BspACI	CCGC	1 cut(s)	830
BspANI	GGCC	2 cut(s)	86, 168
BspCNI	CTCAG	3 cut(s)	492, 1714, 1861
BspDI	ATCGAT	1 cut(s)	261
BspEI	TCCGGA	1 cut(s)	1630
BspLI	GGNNCC	8 cut(s)	118, 1114, 1214, 1477, 1582, 1751, 1801, 1857
BspMAI	CTGCAG	1 cut(s)	194
BspOI	GCTAGC	1 cut(s)	1685
BspPI	GGATC	2 cut(s)	1249, 1648
BspT107I	GGYRCC	2 cut(s)	1475, 1749
BsrDI	GCAATG	2 cut(s)	553, 1488
BsrFI	RCCGGY	1 cut(s)	541
BssAI	RCCGGY	1 cut(s)	541
BssECI	CCNNGG	7 cut(s)	417, 487, 488, 1327, 1437, 1479, 1657
BssMI	GATC	6 cut(s)	79, 468, 916, 1241, 1653, 1815
BssNI	GRCGYC	1 cut(s)	316
BssT1I	CCWWGG	3 cut(s)	1327, 1437, 1657
Bst2UI	CCWGG	2 cut(s)	419, 489
Bst4CI	ACNGT	6 cut(s)	164, 279, 551, 677, 1480, 1525
Bst6I	CTCTTC	1 cut(s)	1659
BstACI	GRCGYC	1 cut(s)	316
BstC8I	GCNNGC	3 cut(s)	88, 1182, 1683
BstDEI	CTNAG	4 cut(s)	479, 1701, 1710, 1848
BstDSI	CCRYGG	1 cut(s)	1479
BstF5I	GGATG	6 cut(s)	169, 304, 437, 1546, 1563, 1740
BstHHI	GCGC	2 cut(s)	437, 1495
BstKTI	GATC	6 cut(s)	82, 471, 919, 1244, 1656, 1818
BstMAI	GTCTC	3 cut(s)	307, 482, 1531
BstMBI	GATC	6 cut(s)	79, 468, 916, 1241, 1653, 1815
BstMWI	GCNNNNNNNGC	4 cut(s)	25, 1482, 1706, 1727
BstNI	CCWGG	2 cut(s)	419, 489
BstNSI	RCATGY	1 cut(s)	477
BstSCI	CCNGG	3 cut(s)	417, 487, 1752
BstSFI	CTRYAG	2 cut(s)	190, 676
BstV1I	GCAGC	6 cut(s)	83, 204, 207, 717, 1266, 1453
Bsu15I	ATCGAT	1 cut(s)	261
BsuRI	GGCC	2 cut(s)	86, 168
BsuTUI	ATCGAT	1 cut(s)	261
BtgI	CCRYGG	1 cut(s)	1479
BtsCI	GGATG	6 cut(s)	169, 304, 437, 1546, 1563, 1740
BtsIMutI	CAGTG	5 cut(s)	160, 487, 624, 1027, 1751
Cac8I	GCNNGC	3 cut(s)	88, 1182, 1683
CaiI	CAGNNNCTG	2 cut(s)	626, 1055
CfoI	GCGC	2 cut(s)	437, 1495
Cfr10I	RCCGGY	1 cut(s)	541
Cfr13I	GGNCC	2 cut(s)	116, 1212
ClaI	ATCGAT	1 cut(s)	261
CseI	GACGC	1 cut(s)	324
Csp6I	GTAC	4 cut(s)	414, 932, 1318, 1750
CviQI	GTAC	4 cut(s)	414, 932, 1318, 1750
DdeI	CTNAG	4 cut(s)	479, 1701, 1710, 1848
DpnI	GATC	6 cut(s)	81, 470, 918, 1243, 1655, 1817
DpnII	GATC	6 cut(s)	79, 468, 916, 1241, 1653, 1815
DraI	TTTAAA	1 cut(s)	852
EaeI	YGGCCR	1 cut(s)	166
Eam1104I	CTCTTC	1 cut(s)	1659
EarI	CTCTTC	1 cut(s)	1659
Ecl136II	GAGCTC	1 cut(s)	1198
Eco130I	CCWWGG	3 cut(s)	1327, 1437, 1657
Eco147I	AGGCCT	1 cut(s)	86
Eco24I	GRGCYC	1 cut(s)	1200
Eco32I	GATATC	1 cut(s)	1360
Eco47I	GGWCC	2 cut(s)	116, 1212
Eco53kI	GAGCTC	1 cut(s)	1198
Eco57I	CTGAAG	2 cut(s)	1188, 1518
Eco88I	CYCGRG	2 cut(s)	310, 515
EcoICRI	GAGCTC	1 cut(s)	1198
EcoO109I	RGGNCCY	1 cut(s)	1212
EcoRII	CCWGG	2 cut(s)	417, 487
EcoRV	GATATC	1 cut(s)	1360
EcoT14I	CCWWGG	3 cut(s)	1327, 1437, 1657
EcoT38I	GRGCYC	1 cut(s)	1200
ErhI	CCWWGG	3 cut(s)	1327, 1437, 1657
Esp3I	CGTCTC	1 cut(s)	307
FaqI	GGGAC	5 cut(s)	102, 470, 729, 910, 1198
FbaI	TGATCA	3 cut(s)	79, 916, 1815
FblI	GTMKAC	2 cut(s)	142, 546
Fnu4HI	GCNGC	6 cut(s)	72, 193, 196, 706, 1255, 1467
FokI	GGATG	6 cut(s)	156, 311, 424, 1553, 1570, 1727
FriOI	GRGCYC	1 cut(s)	1200
Fsp4HI	GCNGC	6 cut(s)	72, 193, 196, 706, 1255, 1467
FspBI	CTAG	7 cut(s)	774, 911, 1217, 1236, 1562, 1608, 1682
GlaI	GCGC	2 cut(s)	436, 1494
GluI	GCNGC	6 cut(s)	72, 193, 196, 706, 1255, 1467
HaeIII	GGCC	2 cut(s)	86, 168
HapII	CCGG	3 cut(s)	542, 1631, 1754
HgaI	GACGC	1 cut(s)	324
HhaI	GCGC	2 cut(s)	437, 1495
Hin1I	GRCGYC	1 cut(s)	316
Hin6I	GCGC	2 cut(s)	435, 1493
HinP1I	GCGC	2 cut(s)	435, 1493
HincII	GTYRAC	3 cut(s)	822, 1102, 1138
HindII	GTYRAC	3 cut(s)	822, 1102, 1138
HindIII	AAGCTT	3 cut(s)	221, 1028, 1810
HpaI	GTTAAC	2 cut(s)	1102, 1138
HpaII	CCGG	3 cut(s)	542, 1631, 1754
HphI	GGTGA	5 cut(s)	193, 1007, 1121, 1316, 1768
Hpy166II	GTNNAC	6 cut(s)	143, 547, 617, 822, 1102, 1138
Hpy8I	GTNNAC	6 cut(s)	143, 547, 617, 822, 1102, 1138
HpyAV	CCTTC	9 cut(s)	167, 329, 349, 992, 1163, 1331, 1582, 1776, 1790
HpyCH4III	ACNGT	6 cut(s)	164, 279, 551, 677, 1480, 1525
HpyCH4IV	ACGT	1 cut(s)	1140
HpyCH4V	TGCA	3 cut(s)	192, 1284, 1740
HpyF10VI	GCNNNNNNNGC	4 cut(s)	25, 1482, 1706, 1727
HpyF3I	CTNAG	4 cut(s)	479, 1701, 1710, 1848
HpySE526I	ACGT	1 cut(s)	1140
Hsp92I	GRCGYC	1 cut(s)	316
HspAI	GCGC	2 cut(s)	435, 1493
Kpn2I	TCCGGA	1 cut(s)	1630
KpnI	GGTACC	1 cut(s)	1753
Ksp22I	TGATCA	3 cut(s)	79, 916, 1815
KspAI	GTTAAC	2 cut(s)	1102, 1138
Kzo9I	GATC	6 cut(s)	79, 468, 916, 1241, 1653, 1815
LmnI	GCTCC	1 cut(s)	1580
Lsp1109I	GCAGC	6 cut(s)	83, 204, 207, 717, 1266, 1453
LweI	GCATC	4 cut(s)	446, 1548, 1687, 1749
MaeI	CTAG	7 cut(s)	774, 911, 1217, 1236, 1562, 1608, 1682
MaeII	ACGT	1 cut(s)	1140
MaeIII	GTNAC	2 cut(s)	389, 1334
MalI	GATC	6 cut(s)	81, 470, 918, 1243, 1655, 1817
MboI	GATC	6 cut(s)	79, 468, 916, 1241, 1653, 1815
MboII	GAAGA	5 cut(s)	575, 997, 1103, 1454, 1676
MfeI	CAATTG	1 cut(s)	1722
MhlI	GDGCHC	2 cut(s)	1186, 1200
MlsI	TGGCCA	1 cut(s)	168
MluNI	TGGCCA	1 cut(s)	168
MlyI	GAGTC	1 cut(s)	1768
MmeI	TCCRAC	1 cut(s)	1650
Mox20I	TGGCCA	1 cut(s)	168
MroI	TCCGGA	1 cut(s)	1630
MscI	TGGCCA	1 cut(s)	168
MslI	CAYNNNNRTG	5 cut(s)	206, 212, 606, 791, 1735
Msp20I	TGGCCA	1 cut(s)	168
MspA1I	CMGCKG	1 cut(s)	1166
MspI	CCGG	3 cut(s)	542, 1631, 1754
MspR9I	CCNGG	3 cut(s)	419, 489, 1754
MunI	CAATTG	1 cut(s)	1722
Mva1269I	GAATGC	1 cut(s)	1794
MvaI	CCWGG	2 cut(s)	419, 489
MwoI	GCNNNNNNNGC	4 cut(s)	25, 1482, 1706, 1727
NciI	CCSGG	1 cut(s)	1754
NdeII	GATC	6 cut(s)	79, 468, 916, 1241, 1653, 1815
NheI	GCTAGC	1 cut(s)	1681
NlaIV	GGNNCC	8 cut(s)	118, 1114, 1214, 1477, 1582, 1751, 1801, 1857
NmuCI	GTSAC	1 cut(s)	1334
NspI	RCATGY	1 cut(s)	477
OliI	CACNNNNGTG	1 cut(s)	1735
PasI	CCCWGGG	1 cut(s)	488
PceI	AGGCCT	1 cut(s)	86
PciI	ACATGT	1 cut(s)	473
PctI	GAATGC	1 cut(s)	1794
PflMI	CCANNNNNTGG	1 cut(s)	626
PkrI	GCNGC	6 cut(s)	73, 194, 197, 707, 1256, 1468
PleI	GAGTC	1 cut(s)	1767
PpsI	GAGTC	1 cut(s)	1767
PpuMI	RGGWCCY	1 cut(s)	1212
PscI	ACATGT	1 cut(s)	473
Psp124BI	GAGCTC	1 cut(s)	1200
Psp5II	RGGWCCY	1 cut(s)	1212
Psp6I	CCWGG	2 cut(s)	417, 487
PspGI	CCWGG	2 cut(s)	417, 487
PspN4I	GGNNCC	8 cut(s)	118, 1114, 1214, 1477, 1582, 1751, 1801, 1857
PspPI	GGNCC	2 cut(s)	116, 1212
PspPPI	RGGWCCY	1 cut(s)	1212
PstI	CTGCAG	1 cut(s)	194
PstNI	CAGNNNCTG	2 cut(s)	626, 1055
PvuII	CAGCTG	1 cut(s)	1166
RsaI	GTAC	4 cut(s)	415, 933, 1319, 1751
RsaNI	GTAC	4 cut(s)	414, 932, 1318, 1750
RseI	CAYNNNNRTG	5 cut(s)	206, 212, 606, 791, 1735
SacI	GAGCTC	1 cut(s)	1200
SatI	GCNGC	6 cut(s)	72, 193, 196, 706, 1255, 1467
Sau3AI	GATC	6 cut(s)	79, 468, 916, 1241, 1653, 1815
Sau96I	GGNCC	2 cut(s)	116, 1212
SchI	GAGTC	1 cut(s)	1768
ScrFI	CCNGG	3 cut(s)	419, 489, 1754
SduI	GDGCHC	2 cut(s)	1186, 1200
SfaNI	GCATC	4 cut(s)	446, 1548, 1687, 1749
SfcI	CTRYAG	2 cut(s)	190, 676
SinI	GGWCC	2 cut(s)	116, 1212
SmiMI	CAYNNNNRTG	5 cut(s)	206, 212, 606, 791, 1735
SmlI	CTYRAG	1 cut(s)	1067
SmoI	CTYRAG	1 cut(s)	1067
SseBI	AGGCCT	1 cut(s)	86
SsiI	CCGC	1 cut(s)	830
SspMI	CTAG	7 cut(s)	774, 911, 1217, 1236, 1562, 1608, 1682
SstI	GAGCTC	1 cut(s)	1200
StuI	AGGCCT	1 cut(s)	86
StyD4I	CCNGG	3 cut(s)	417, 487, 1752
StyI	CCWWGG	3 cut(s)	1327, 1437, 1657
TaaI	ACNGT	6 cut(s)	164, 279, 551, 677, 1480, 1525
TaiI	ACGT	1 cut(s)	1143
TaqI	TCGA	3 cut(s)	261, 1147, 1314
TscAI	CASTG	5 cut(s)	167, 487, 631, 1027, 1751
TseFI	GTSAC	1 cut(s)	1334
TseI	GCWGC	6 cut(s)	71, 192, 195, 705, 1254, 1466
Tsp45I	GTSAC	1 cut(s)	1334
TspDTI	ATGAA	6 cut(s)	17, 233, 1216, 1251, 1601, 1787
TspGWI	ACGGA	2 cut(s)	128, 1821
TspRI	CASTG	5 cut(s)	167, 487, 631, 1027, 1751
Van91I	CCANNNNNTGG	1 cut(s)	626
VpaK11BI	GGWCC	2 cut(s)	116, 1212
XapI	RAATTY	4 cut(s)	427, 501, 520, 1404
XbaI	TCTAGA	1 cut(s)	1235
XceI	RCATGY	1 cut(s)	477
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1477, 1849
XmiI	GTMKAC	2 cut(s)	142, 546
XspI	CTAG	7 cut(s)	774, 911, 1217, 1236, 1562, 1608, 1682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.