Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0000953

Physical Location & Seq

Genomic Coordinates Forward (+)

1145896 .. 1147911

Gene Structure 2016 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G001380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGGAATCATGCCTCTGCTGAAGCCTCTGTTTTTCTTGCTTGTAATTGTGTTCCCAATTATTGTTGAACCAATTAGCAAATCAGCTGATGATCAGGACTGCCCAGTTCAGAGGTGTAGGCATGATGGTCCCCTTATCCAGTTTCCATTCCGTCTACAACACTATCCCCTTCACTGTGGCCATCCAGAGTTTGAGGTTTCCTGCAGCAGCTTCACCAACATGACCATGATAAAGCTTTCCTCATCATCAGGATTCTTTCTAATACAGTCAATTGATTACAAGAGACAGCAGTTTCGTGTGTATGATGAGGATGGTTGCCTCCCGAGACGCCTTCTTAATTTTACTGTCTCCTCCTCGTTCTTTCAACCAGCACATGTGATTGACGATTCCGTTTGCTTTTACAATTACATGACGTCGAGGAACATGACGTTGTTAAATTGTACCACGGCACAAAATTTGAGCGAATCCACCACACCAGCTGACAACTCCATAGCGATCACATGTCTCAGTGTCCCAGGGCATTATCAGATTCTGGCTGTTACCGAGTATTTTGCTTCCTCTGACTTGCCGGTAGGCAGTGATTGCTATACTTTGTCAGAACTCTTTCTTCCAGTTCAAAAAACACACGATGATAGGTGTGAACCGGACACGGGTTTATTACTGGAATGGAGTGAATCGGATTTCCCAGAATGTCAAAAATGTAGAGGAAGCTGCTATTTCAGTTACAGCAGCAATCAAGTCTTGAAGTGTTATCCTCGAAAACACAAAGTGAGTGTATGTGGGTTTGTTGTCTTGTCAACTACGGTGGTAGCCATCTTTTACCATTTAAAGCAATCAAAGAGGATAGAGGATAAGGAGAATCAAAGAAAGATTGAAAAGTTCCTAGATGATCACAAGTCCCATGTACCAACAAGATACTCCTACGCTGATATAAAGAAGATGACAAATGGATTCACGAAGAAGTTGGGTGAAGGAGGTTTCGGAAGTGTTTTCAGTGGAAAGCTTCCCGCTAATGGAGTGCCAGTTGCCGTAAAATTTCTCAAGGATTCTAAAGGAAATGGAGATGATTTTGTTAATGAAGTGGGAACCATTGGCAGAATTCACCATGTTAACGTGGTTCGACTGCTTGGGTTTTCAGCCGAACGAGGGAGGCGTGCTCTTATTTATGAACACATGCCAAACAGGTCCCTAGAGAAGTTCATCAAATCTAGAGGATCAAATAAGAGCAGCAGTTCATTTAACTGGGAGAAACTTTGCAACATCATCACAGGTATAGCAAAGGGAATCGAGTACCTTCACCAAGGGTGTGACCAGAGGATTCTCCACTTTGATATCAAGCCTCACAATATCTTGTTAGACCATGCCTTTAATCCGAAGATTTCTGATTTTGGTATGGCTAAACTCTGTTCCAAGGAAGATAGTGCTATATCTATGACTGCTGCCAGAGGCACTATGGGCTACATTGCGCCTGAAGTATTTAATGGCAACTTTGGAACTGTCTCCTACAAATCGGATGTGTATAGTTTCGGGATGCTAGTTCTTGAAGTTATTGGAGCCATGAAGGAAACTGGTGTTACATCTAGCGACAATGAGGTGTATTTTCCTGAATTGATTTACAAGTGTCTGATCCAGGGAGAAGAGTTGGATTTGGAGCTAGCTGATGATGGAGATGCTCAGATTGCTAAGAGATTAGCAATTGTGGCACTTTGGTGCATCCAGTGGTACCCGGTGAGTCGCCCTTCCATGAAAGTCGTTGTTAGAATGCTGGAAGGAACCTTTGAAAGCTTGATCATGCCACCCAATCCGTTTGCTTCCACAACTCAAATGGAACCAACAACAACCCCATCAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015695 GO:0015696 GO:0015837 GO:0015843 GO:0016020 GO:0016021 GO:0019755 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

617

Amino Acids

69.33

Weight (kDa)

6.53

Isoelectric Point (pI)

43.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	34 - 102	2.8e-14	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	318 - 588	2.8e-41	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	319 - 586	1.3e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000953)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g01480 FvH4_6g01500 FvH4_6g01501
malus_domestica	MD04G1233200.v1.1 MD12G1250800.v1.1 MD12G1251200.v1.1
prunus_persica	Prupe.6G352900_v2.0.a1 Prupe.6G352900_v2.0.a1
pyrus_communis	pycom04g20660 pycom04g20720 pycom12g23110
rosa_chinensis	RchiOBHm_Chr3g0449111 RchiOBHm_Chr3g0449121 RchiOBHm_Chr3g0449341 RchiOBHm_Chr3g0449371 RchiOBHm_Chr3g0449391 RchiOBHm_Chr7g0209911
rosa_laevigata	RLG00000025835 RLG00000025837 RLG00000025851 RLG00000025852
rosa_multiflora	Rmu_sc0001234.1_g000001 Rmu_sc0001234.1_g000005 Rmu_sc0001234.1_g000007 Rmu_sc0001234.1_g000011 Rmu_sc0003776.1_g000032 Rmu_sc0004874.1_g000012 Rmu_sc0004874.1_g000015 Rmu_sc0006661.1_g000002 Rmu_sc0006661.1_g000003 Rmu_sc0006661.1_g000005 Rmu_sc0017357.1_g000001 Rmu_sc0028145.1_g000001 Rmu_sc0032682.1_g000001 Rmu_ssc0000423.1_g000002
rosa_roxburghii	Rroxscaffold_3G00248810 Rroxscaffold_6G00427210 Rroxscaffold_6G00427350
rosa_rugosa	Rorug02G0618000 Rorug02G0618300 Rorug02G0618400.1 Rorug02G0619900 Rorug02G0620300 Rorug06G0099800 Rorug06G0099800 Rorug07G0117300
rosa_samantha	Rh3AG017800 Rh3AG018000 Rh3BG016800 Rh3BG018100 Rh3BG018300 Rh3CG015900 Rh3CG017000 Rh3CG017200 Rh3DG017100 Rh3DG018300 Rh3DG018700 Rh7BG245800
rosa_wichuraiana	Rw3G001250 Rw3G001380 Rw3G001410 Rw3G001420 Rw3G001440 Rw7G021310

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	416
Acc65I	GGTACC	1 cut(s)	1722
AccB1I	GGYRCC	1 cut(s)	1722
AccI	GTMKAC	1 cut(s)	154
AciI	CCGC	1 cut(s)	1008
AclWI	GGATC	2 cut(s)	1222, 1621
AcoI	YGGCCR	1 cut(s)	178
AcsI	RAATTY	3 cut(s)	454, 1034, 1098
AcuI	CTGAAG	2 cut(s)	41, 1491
AcyI	GRCGYC	2 cut(s)	328, 413
AdeI	CACNNNGTG	1 cut(s)	769
AfaI	GTAC	4 cut(s)	442, 906, 1292, 1724
AfiI	CCNNNNNNNGG	3 cut(s)	650, 1013, 1146
AflIII	ACRYGT	2 cut(s)	373, 500
AgsI	TTSAA	7 cut(s)	68, 365, 617, 745, 875, 1544, 1781
AjnI	CCWGG	2 cut(s)	514, 1629
AleI	CACNNNNGTG	1 cut(s)	1708
AluBI	AGCT	9 cut(s)	86, 210, 235, 479, 711, 1003, 1654, 1658, 1785
AluI	AGCT	9 cut(s)	86, 210, 235, 479, 711, 1003, 1654, 1658, 1785
Alw21I	GWGCWC	1 cut(s)	1159
Alw26I	GTCTC	5 cut(s)	277, 319, 352, 509, 1504
AlwI	GGATC	2 cut(s)	1222, 1621
AlwNI	CAGNNNCTG	1 cut(s)	532
Ama87I	CYCGRG	1 cut(s)	322
AoxI	GGCC	1 cut(s)	178
ApeKI	GCWGC	6 cut(s)	204, 207, 711, 729, 1227, 1439
ApoI	RAATTY	3 cut(s)	454, 1034, 1098
ArsI	GACNNNNNNTTYG	2 cut(s)	276, 308
Asp700I	GAANNNNTTC	1 cut(s)	603
Asp718I	GGTACC	1 cut(s)	1722
AspLEI	GCGC	1 cut(s)	1468
AspS9I	GGNCC	2 cut(s)	128, 1185
AsuC2I	CCSGG	1 cut(s)	1727
AsuHPI	GGTGA	5 cut(s)	205, 980, 1094, 1289, 1741
AsuNHI	GCTAGC	1 cut(s)	1654
AvaI	CYCGRG	1 cut(s)	322
AvaII	GGWCC	2 cut(s)	128, 1185
BalI	TGGCCA	1 cut(s)	180
BanI	GGYRCC	1 cut(s)	1722
Bbv12I	GWGCWC	1 cut(s)	1159
BbvI	GCAGC	6 cut(s)	216, 219, 698, 741, 1239, 1426
BccI	CCATC	6 cut(s)	119, 189, 305, 821, 1658, 1852
BceAI	ACGGC	2 cut(s)	462, 1013
BcgI	CGANNNNNNTGC	2 cut(s)	533, 567
BciT130I	CCWGG	2 cut(s)	516, 1631
BclI	TGATCA	3 cut(s)	91, 889, 1788
BcnI	CCSGG	1 cut(s)	1727
BcoDI	GTCTC	5 cut(s)	277, 319, 352, 509, 1504
BfaI	CTAG	6 cut(s)	884, 1190, 1209, 1535, 1581, 1655
BfmI	CTRYAG	1 cut(s)	202
BisI	GCNGC	6 cut(s)	205, 208, 712, 730, 1228, 1440
BlsI	GCNGC	6 cut(s)	206, 209, 713, 731, 1229, 1441
Bme1390I	CCNGG	3 cut(s)	516, 1631, 1727
Bme18I	GGWCC	2 cut(s)	128, 1185
BmeT110I	CYCGRG	1 cut(s)	322
BmgT120I	GGNCC	2 cut(s)	128, 1185
BmiI	GGNNCC	7 cut(s)	130, 1087, 1187, 1555, 1724, 1774, 1830
BmrFI	CCNGG	3 cut(s)	516, 1631, 1727
BmrI	ACTGGG	2 cut(s)	98, 1252
BmsI	GCATC	3 cut(s)	1521, 1660, 1722
BmtI	GCTAGC	1 cut(s)	1658
BmuI	ACTGGG	2 cut(s)	98, 1252
BplI	GAGNNNNNCTC	2 cut(s)	1141, 1173
BpuEI	CTTGAG	1 cut(s)	1025
BpuMI	CCSGG	1 cut(s)	1727
BsaHI	GRCGYC	2 cut(s)	328, 413
BsaJI	CCNNGG	6 cut(s)	444, 514, 515, 1300, 1410, 1630
BsaWI	WCCGGW	1 cut(s)	643
BsaXI	ACNNNNNCTCC	2 cut(s)	1008, 1038
Bsc4I	CCNNNNNNNGG	3 cut(s)	650, 1013, 1146
Bse118I	RCCGGY	1 cut(s)	568
Bse1I	ACTGG	8 cut(s)	104, 139, 611, 666, 1022, 1247, 1573, 1717
Bse3DI	GCAATG	1 cut(s)	1461
BseBI	CCWGG	2 cut(s)	516, 1631
BseDI	CCNNGG	6 cut(s)	444, 514, 515, 1300, 1410, 1630
BseGI	GGATG	5 cut(s)	181, 316, 1519, 1536, 1713
BseLI	CCNNNNNNNGG	3 cut(s)	650, 1013, 1146
BseMI	GCAATG	1 cut(s)	1461
BseMII	CTCAG	2 cut(s)	520, 1688
BseNI	ACTGG	8 cut(s)	104, 139, 611, 666, 1022, 1247, 1573, 1717
BseRI	GAGGAG	2 cut(s)	340, 343
BseXI	GCAGC	6 cut(s)	216, 219, 698, 741, 1239, 1426
BshFI	GGCC	1 cut(s)	180
BshNI	GGYRCC	1 cut(s)	1722
BsiHKAI	GWGCWC	1 cut(s)	1159
BsiHKCI	CYCGRG	1 cut(s)	322
BsiSI	CCGG	3 cut(s)	569, 644, 1727
BslFI	GGGAC	4 cut(s)	114, 497, 883, 1171
BslI	CCNNNNNNNGG	3 cut(s)	650, 1013, 1146
BsmAI	GTCTC	5 cut(s)	277, 319, 352, 509, 1504
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	4 cut(s)	114, 497, 883, 1171
BsmI	GAATGC	1 cut(s)	1767
BsnI	GGCC	1 cut(s)	180
BsoBI	CYCGRG	1 cut(s)	322
Bsp1286I	GDGCHC	1 cut(s)	1159
Bsp143I	GATC	6 cut(s)	91, 495, 889, 1214, 1626, 1788
BspACI	CCGC	1 cut(s)	1008
BspANI	GGCC	1 cut(s)	180
BspCNI	CTCAG	2 cut(s)	519, 1687
BspLI	GGNNCC	7 cut(s)	130, 1087, 1187, 1555, 1724, 1774, 1830
BspMAI	CTGCAG	1 cut(s)	206
BspOI	GCTAGC	1 cut(s)	1658
BspPI	GGATC	2 cut(s)	1222, 1621
BspT107I	GGYRCC	1 cut(s)	1722
BsrDI	GCAATG	1 cut(s)	1461
BsrFI	RCCGGY	1 cut(s)	568
BsrI	ACTGG	8 cut(s)	104, 139, 611, 666, 1022, 1247, 1573, 1717
BssAI	RCCGGY	1 cut(s)	568
BssECI	CCNNGG	6 cut(s)	444, 514, 515, 1300, 1410, 1630
BssMI	GATC	6 cut(s)	91, 495, 889, 1214, 1626, 1788
BssNI	GRCGYC	2 cut(s)	328, 413
BssT1I	CCWWGG	2 cut(s)	1300, 1410
Bst2UI	CCWGG	2 cut(s)	516, 1631
Bst4CI	ACNGT	5 cut(s)	176, 267, 346, 805, 1498
Bst6I	CTCTTC	1 cut(s)	1632
BstACI	GRCGYC	2 cut(s)	328, 413
BstAPI	GCANNNNNTGC	1 cut(s)	582
BstC8I	GCNNGC	2 cut(s)	1155, 1656
BstDEI	CTNAG	3 cut(s)	506, 1674, 1683
BstDSI	CCRYGG	1 cut(s)	444
BstF5I	GGATG	5 cut(s)	181, 316, 1519, 1536, 1713
BstHHI	GCGC	1 cut(s)	1468
BstKTI	GATC	6 cut(s)	94, 498, 892, 1217, 1629, 1791
BstMAI	GTCTC	5 cut(s)	277, 319, 352, 509, 1504
BstMBI	GATC	6 cut(s)	91, 495, 889, 1214, 1626, 1788
BstMWI	GCNNNNNNNGC	4 cut(s)	582, 1455, 1679, 1700
BstNI	CCWGG	2 cut(s)	516, 1631
BstNSI	RCATGY	3 cut(s)	377, 504, 1177
BstSCI	CCNGG	3 cut(s)	514, 1629, 1725
BstSFI	CTRYAG	1 cut(s)	202
BstV1I	GCAGC	6 cut(s)	216, 219, 698, 741, 1239, 1426
BsuRI	GGCC	1 cut(s)	180
BtgI	CCRYGG	1 cut(s)	444
BtsCI	GGATG	5 cut(s)	181, 316, 1519, 1536, 1713
BtsI	GCAGTG	1 cut(s)	583
BtsIMutI	CAGTG	5 cut(s)	172, 514, 583, 1000, 1724
Cac8I	GCNNGC	2 cut(s)	1155, 1656
CaiI	CAGNNNCTG	1 cut(s)	532
CfoI	GCGC	1 cut(s)	1468
Cfr10I	RCCGGY	1 cut(s)	568
Cfr13I	GGNCC	2 cut(s)	128, 1185
CseI	GACGC	1 cut(s)	336
Csp6I	GTAC	4 cut(s)	441, 905, 1291, 1723
CspCI	CAANNNNNGTGG	2 cut(s)	786, 821
CviQI	GTAC	4 cut(s)	441, 905, 1291, 1723
DdeI	CTNAG	3 cut(s)	506, 1674, 1683
DpnI	GATC	6 cut(s)	93, 497, 891, 1216, 1628, 1790
DpnII	GATC	6 cut(s)	91, 495, 889, 1214, 1626, 1788
DraI	TTTAAA	1 cut(s)	828
DraIII	CACNNNGTG	1 cut(s)	769
EaeI	YGGCCR	1 cut(s)	178
Eam1104I	CTCTTC	1 cut(s)	1632
EarI	CTCTTC	1 cut(s)	1632
Eco130I	CCWWGG	2 cut(s)	1300, 1410
Eco32I	GATATC	1 cut(s)	1333
Eco47I	GGWCC	2 cut(s)	128, 1185
Eco57I	CTGAAG	2 cut(s)	41, 1491
Eco88I	CYCGRG	1 cut(s)	322
EcoO109I	RGGNCCY	1 cut(s)	1185
EcoRI	GAATTC	1 cut(s)	1098
EcoRII	CCWGG	2 cut(s)	514, 1629
EcoRV	GATATC	1 cut(s)	1333
EcoT14I	CCWWGG	2 cut(s)	1300, 1410
ErhI	CCWWGG	2 cut(s)	1300, 1410
Esp3I	CGTCTC	1 cut(s)	319
FaqI	GGGAC	4 cut(s)	114, 497, 883, 1171
FauI	CCCGC	1 cut(s)	1015
FbaI	TGATCA	3 cut(s)	91, 889, 1788
FblI	GTMKAC	1 cut(s)	154
Fnu4HI	GCNGC	6 cut(s)	205, 208, 712, 730, 1228, 1440
FokI	GGATG	5 cut(s)	168, 323, 1526, 1543, 1700
Fsp4HI	GCNGC	6 cut(s)	205, 208, 712, 730, 1228, 1440
FspBI	CTAG	6 cut(s)	884, 1190, 1209, 1535, 1581, 1655
GlaI	GCGC	1 cut(s)	1467
GluI	GCNGC	6 cut(s)	205, 208, 712, 730, 1228, 1440
HaeIII	GGCC	1 cut(s)	180
HapII	CCGG	3 cut(s)	569, 644, 1727
HgaI	GACGC	1 cut(s)	336
HhaI	GCGC	1 cut(s)	1468
Hin1I	GRCGYC	2 cut(s)	328, 413
Hin6I	GCGC	1 cut(s)	1466
HinP1I	GCGC	1 cut(s)	1466
HincII	GTYRAC	2 cut(s)	798, 1111
HindII	GTYRAC	2 cut(s)	798, 1111
HindIII	AAGCTT	3 cut(s)	233, 1001, 1783
HpaI	GTTAAC	1 cut(s)	1111
HpaII	CCGG	3 cut(s)	569, 644, 1727
HphI	GGTGA	5 cut(s)	205, 980, 1094, 1289, 1741
Hpy166II	GTNNAC	4 cut(s)	155, 641, 798, 1111
Hpy8I	GTNNAC	4 cut(s)	155, 641, 798, 1111
Hpy99I	CGWCG	1 cut(s)	418
HpyAV	CCTTC	7 cut(s)	179, 341, 965, 1304, 1555, 1749, 1763
HpyCH4III	ACNGT	5 cut(s)	176, 267, 346, 805, 1498
HpyCH4IV	ACGT	3 cut(s)	413, 428, 1113
HpyCH4V	TGCA	3 cut(s)	204, 1257, 1713
HpyF10VI	GCNNNNNNNGC	4 cut(s)	582, 1455, 1679, 1700
HpyF3I	CTNAG	3 cut(s)	506, 1674, 1683
HpySE526I	ACGT	3 cut(s)	413, 428, 1113
Hsp92I	GRCGYC	2 cut(s)	328, 413
HspAI	GCGC	1 cut(s)	1466
KpnI	GGTACC	1 cut(s)	1726
Ksp22I	TGATCA	3 cut(s)	91, 889, 1788
KspAI	GTTAAC	1 cut(s)	1111
Kzo9I	GATC	6 cut(s)	91, 495, 889, 1214, 1626, 1788
LmnI	GCTCC	2 cut(s)	1553, 1651
Lsp1109I	GCAGC	6 cut(s)	216, 219, 698, 741, 1239, 1426
LweI	GCATC	3 cut(s)	1521, 1660, 1722
MaeI	CTAG	6 cut(s)	884, 1190, 1209, 1535, 1581, 1655
MaeII	ACGT	3 cut(s)	413, 428, 1113
MaeIII	GTNAC	4 cut(s)	538, 722, 1307, 1573
MalI	GATC	6 cut(s)	93, 497, 891, 1216, 1628, 1790
MboI	GATC	6 cut(s)	91, 495, 889, 1214, 1626, 1788
MboII	GAAGA	6 cut(s)	599, 949, 970, 1387, 1427, 1649
MfeI	CAATTG	2 cut(s)	270, 1695
MhlI	GDGCHC	1 cut(s)	1159
MlsI	TGGCCA	1 cut(s)	180
MluNI	TGGCCA	1 cut(s)	180
MlyI	GAGTC	1 cut(s)	1741
MmeI	TCCRAC	1 cut(s)	1623
Mox20I	TGGCCA	1 cut(s)	180
MroXI	GAANNNNTTC	1 cut(s)	603
MscI	TGGCCA	1 cut(s)	180
MseI	TTAA	9 cut(s)	336, 434, 827, 1074, 1110, 1239, 1368, 1479, 1852
MslI	CAYNNNNRTG	3 cut(s)	218, 224, 1708
Msp20I	TGGCCA	1 cut(s)	180
MspA1I	CMGCKG	2 cut(s)	86, 479
MspI	CCGG	3 cut(s)	569, 644, 1727
MspR9I	CCNGG	3 cut(s)	516, 1631, 1727
MunI	CAATTG	2 cut(s)	270, 1695
Mva1269I	GAATGC	1 cut(s)	1767
MvaI	CCWGG	2 cut(s)	516, 1631
MwoI	GCNNNNNNNGC	4 cut(s)	582, 1455, 1679, 1700
NciI	CCSGG	1 cut(s)	1727
NdeII	GATC	6 cut(s)	91, 495, 889, 1214, 1626, 1788
NheI	GCTAGC	1 cut(s)	1654
NlaIV	GGNNCC	7 cut(s)	130, 1087, 1187, 1555, 1724, 1774, 1830
NmuCI	GTSAC	1 cut(s)	1307
NspI	RCATGY	3 cut(s)	377, 504, 1177
OliI	CACNNNNGTG	1 cut(s)	1708
PasI	CCCWGGG	1 cut(s)	515
PciI	ACATGT	2 cut(s)	373, 500
PcsI	WCGNNNNNNNCGW	1 cut(s)	1150
PctI	GAATGC	1 cut(s)	1767
PdmI	GAANNNNTTC	1 cut(s)	603
PkrI	GCNGC	6 cut(s)	206, 209, 713, 731, 1229, 1441
PleI	GAGTC	1 cut(s)	1740
PpsI	GAGTC	1 cut(s)	1740
PpuMI	RGGWCCY	1 cut(s)	1185
PscI	ACATGT	2 cut(s)	373, 500
Psp5II	RGGWCCY	1 cut(s)	1185
Psp6I	CCWGG	2 cut(s)	514, 1629
PspGI	CCWGG	2 cut(s)	514, 1629
PspN4I	GGNNCC	7 cut(s)	130, 1087, 1187, 1555, 1724, 1774, 1830
PspPI	GGNCC	2 cut(s)	128, 1185
PspPPI	RGGWCCY	1 cut(s)	1185
PstI	CTGCAG	1 cut(s)	206
PstNI	CAGNNNCTG	1 cut(s)	532
PvuII	CAGCTG	2 cut(s)	86, 479
RsaI	GTAC	4 cut(s)	442, 906, 1292, 1724
RsaNI	GTAC	4 cut(s)	441, 905, 1291, 1723
RseI	CAYNNNNRTG	3 cut(s)	218, 224, 1708
SaqAI	TTAA	9 cut(s)	336, 434, 827, 1074, 1110, 1239, 1368, 1479, 1852
SatI	GCNGC	6 cut(s)	205, 208, 712, 730, 1228, 1440
Sau3AI	GATC	6 cut(s)	91, 495, 889, 1214, 1626, 1788
Sau96I	GGNCC	2 cut(s)	128, 1185
SchI	GAGTC	1 cut(s)	1741
ScrFI	CCNGG	3 cut(s)	516, 1631, 1727
SduI	GDGCHC	1 cut(s)	1159
SfaNI	GCATC	3 cut(s)	1521, 1660, 1722
SfcI	CTRYAG	1 cut(s)	202
SinI	GGWCC	2 cut(s)	128, 1185
SmiMI	CAYNNNNRTG	3 cut(s)	218, 224, 1708
SmlI	CTYRAG	1 cut(s)	1040
SmoI	CTYRAG	1 cut(s)	1040
SsiI	CCGC	1 cut(s)	1008
SspMI	CTAG	6 cut(s)	884, 1190, 1209, 1535, 1581, 1655
StyD4I	CCNGG	3 cut(s)	514, 1629, 1725
StyI	CCWWGG	2 cut(s)	1300, 1410
TaaI	ACNGT	5 cut(s)	176, 267, 346, 805, 1498
TaiI	ACGT	3 cut(s)	416, 431, 1116
TaqI	TCGA	4 cut(s)	416, 757, 1120, 1287
Tru1I	TTAA	9 cut(s)	336, 434, 827, 1074, 1110, 1239, 1368, 1479, 1852
Tru9I	TTAA	9 cut(s)	336, 434, 827, 1074, 1110, 1239, 1368, 1479, 1852
TscAI	CASTG	5 cut(s)	179, 514, 583, 1000, 1724
TseFI	GTSAC	1 cut(s)	1307
TseI	GCWGC	6 cut(s)	204, 207, 711, 729, 1227, 1439
Tsp45I	GTSAC	1 cut(s)	1307
TspDTI	ATGAA	6 cut(s)	1092, 1182, 1189, 1224, 1574, 1760
TspGWI	ACGGA	3 cut(s)	140, 379, 1794
TspRI	CASTG	5 cut(s)	179, 514, 583, 1000, 1724
VpaK11BI	GGWCC	2 cut(s)	128, 1185
XapI	RAATTY	3 cut(s)	454, 1034, 1098
XbaI	TCTAGA	1 cut(s)	1208
XceI	RCATGY	3 cut(s)	377, 504, 1177
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1450, 1822
XmiI	GTMKAC	1 cut(s)	154
XmnI	GAANNNNTTC	1 cut(s)	603
XspI	CTAG	6 cut(s)	884, 1190, 1209, 1535, 1581, 1655
ZraI	GACGTC	1 cut(s)	414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.