MD15G1268900.v1.1

Belongs to the ubiquitin-conjugating enzyme family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
23253381 .. 23254939
1559 bp
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UTR
Exon/CDS
Intron
MD15G1268900.v1.1.491

Sequence Viewer

Length: 222 bp
ATGATTAGGCTATTCAAAGTAAAGGAAAAGCAAAGAGAACTTGCTGAAAATGCGAATGGTGCGTCACCTGTGAAGAAGCAATCTGCTGGGGAATTACATCTTCATGGAGATATATCTGAGCTGAATCTTGCAAAAACTTGTAGCATTTCATTTCCTAATAGCAAGGATCAGCTGACGAACTTTGAGGTTACCATTCGTCTGGATGAAGGATATGACTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

74

Amino Acids

8.16

Weight (kDa)

6.07

Isoelectric Point (pI)

26.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 174
AgsI TTSAA 1 cut(s) 16
AluBI AGCT 2 cut(s) 121, 172
AluI AGCT 2 cut(s) 121, 172
AlwI GGATC 1 cut(s) 174
ArsI GACNNNNNNTTYG 2 cut(s) 47, 79
AsuHPI GGTGA 1 cut(s) 57
BseGI GGATG 1 cut(s) 208
BseMII CTCAG 1 cut(s) 108
BseYI CCCAGC 1 cut(s) 86
Bsp143I GATC 1 cut(s) 166
BspCNI CTCAG 1 cut(s) 109
BspPI GGATC 1 cut(s) 174
BssMI GATC 1 cut(s) 166
BstDEI CTNAG 1 cut(s) 117
BstEII GGTNACC 1 cut(s) 187
BstF5I GGATG 1 cut(s) 208
BstKTI GATC 1 cut(s) 169
BstMBI GATC 1 cut(s) 166
BstMWI GCNNNNNNNGC 2 cut(s) 50, 59
BstPI GGTNACC 1 cut(s) 187
BstXI CCANNNNNNTGG 1 cut(s) 199
BtsCI GGATG 1 cut(s) 208
CseI GACGC 1 cut(s) 51
CviAII CATG 1 cut(s) 104
CviJI RGCY 3 cut(s) 10, 121, 172
CviKI_1 RGCY 3 cut(s) 10, 121, 172
DdeI CTNAG 1 cut(s) 117
DpnI GATC 1 cut(s) 168
DpnII GATC 1 cut(s) 166
Eco91I GGTNACC 1 cut(s) 187
EcoO65I GGTNACC 1 cut(s) 187
FaeI CATG 1 cut(s) 107
FaiI YATR 3 cut(s) 105, 113, 213
FatI CATG 1 cut(s) 103
FokI GGATG 1 cut(s) 215
GsaI CCCAGC 1 cut(s) 90
HgaI GACGC 1 cut(s) 51
Hin1II CATG 1 cut(s) 107
HinfI GANTC 2 cut(s) 124, 215
HphI GGTGA 1 cut(s) 57
Hpy188I TCNGA 1 cut(s) 118
Hpy188III TCNNGA 1 cut(s) 200
HpyAV CCTTC 1 cut(s) 200
HpyCH4V TGCA 1 cut(s) 131
HpyF10VI GCNNNNNNNGC 2 cut(s) 50, 59
HpyF3I CTNAG 1 cut(s) 117
Hsp92II CATG 1 cut(s) 107
Kzo9I GATC 1 cut(s) 166
LpnPI CCDG 3 cut(s) 72, 81, 185
MaeIII GTNAC 2 cut(s) 63, 187
MalI GATC 1 cut(s) 168
MboI GATC 1 cut(s) 166
MboII GAAGA 2 cut(s) 85, 92
MluCI AATT 1 cut(s) 92
MlyI GAGTC 1 cut(s) 209
MnlI CCTC 1 cut(s) 178
MslI CAYNNNNRTG 1 cut(s) 102
MspA1I CMGCKG 1 cut(s) 172
MwoI GCNNNNNNNGC 2 cut(s) 50, 59
NdeII GATC 1 cut(s) 166
NlaIII CATG 1 cut(s) 107
NmuCI GTSAC 1 cut(s) 63
PfeI GAWTC 1 cut(s) 124
PleI GAGTC 1 cut(s) 209
PpsI GAGTC 1 cut(s) 209
PspEI GGTNACC 1 cut(s) 187
PspFI CCCAGC 1 cut(s) 86
PvuII CAGCTG 1 cut(s) 172
RseI CAYNNNNRTG 1 cut(s) 102
Sau3AI GATC 1 cut(s) 166
SchI GAGTC 1 cut(s) 209
SetI ASST 4 cut(s) 70, 123, 174, 189
SgeI CNNG 8 cut(s) 53, 80, 99, 116, 140, 150, 175, 212
SmiMI CAYNNNNRTG 1 cut(s) 102
Sse9I AATT 1 cut(s) 92
TasI AATT 1 cut(s) 92
TfiI GAWTC 1 cut(s) 124
TseFI GTSAC 1 cut(s) 63
Tsp45I GTSAC 1 cut(s) 63
TspDTI ATGAA 3 cut(s) 92, 138, 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.