Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000961

Physical Location & Seq

Genomic Coordinates Forward (+)

161673 .. 166282

Gene Structure 4610 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1002400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGGGACCGAATCATCAGCAGCGTCCGTGGAGATATCTGAGCCGTTGCTTCACAATTCCGACGACAAAATCAAGGCCGTAGAGTCCGACGACGACGACCGAATCCCCGAATGGAAGGACCAGATCACCATCAGAGGGCTGGTCGTCAGCGCCGTGCTCGGCAGCCTCTTCTGCATTATCACCCACAAGCTCAATCTGACGGTCGGGATTATCCCCTCCTTGAACGTCGCCGCAGGGCTGCTCGGGTTCTTCTTCGTCAAATCATGGACTGGCTTCTGGGGAAAATTAGGGTTTTCAGTTACCCCCTTTACCAGGCAGGAGAACACCGTCATCCAGACCTGCGTCGTTGCCTGCTATGGCCTCGCTTTTAGCGGGGGGTTCGGTTCGTATTTGCTTGCCATGGATGAGAGAACATATAATCTAATTGGTACTGATTACCCGGGTAATCGGGCGGAAGATGTTATCAATCCGAGCTTGTGGTGGATGAGTGGTTTCCTGTTTGTTGTCAGCTTCCTGGGCATTTTATGTCTCGTTCCGCTTCGCAAGGTTATGGTCATGGATTACAAACTAACATATCCCAGTGGGACAGCCACAGCAATGTTGATAAATAGCTTCCACACTAAGAGTGGAGCAGAGCTTGCCGGGAAGCAAGTTCATGCTCTAGGGAAGTATTTAAGTATAAGTTTAATTTGGAGCTGCTTCAAGTGGTTCTTTAGTGGTATTGGAGATTCATGCGGATTTGACAATTTTCCTAGCTTTGGTTTGACACTGTTTAAGAACACGTTTTATTTTGACTTCAGTCCAACATATGTTGGATGTGGTCTTATATGTCCTCACATAGTCAACTGCTCAGCTCTTTTTGGGGCTATCTTATCATGGGGTTTTCTTTGGCCGTTAATATCCCAATATTCTGGGGTCTGGTATCCAGCCGACCTTGGTAGCAATGATTTCAAAGGTCTTTATGGATATAAGGTCTTTATATCCATTGCCCTCATCCTAGGGGATGGTCTCTACAATTTGATAAAGATTATAGCCTTTACTCTCAAGGAACTATCCAATAAGAGTAGCAAACAGAGCAACCTTCCTGTTGTCAAGGAGGCCTTAGGTGATGAGAGTTCAGAAGTACCACTAGAGCAAAAAAAGAGGGATGCAATATTTCTTAAGGATAGGATACCGACGTGGGTTGCTGGAGCTGGATATTTGGGCCTAGTGGTAATATCCACAGCAACAATGCCAATCATCTTTCCACCTCTGAAATGGTATTTGGTTCTATGCTCATACATCCTTGCTCCTGTCCTTGCCTTCTGCAACTCCTATGGCACTGGCCTCACGGACTGGAGTTTAGCTTCAACTTATGGGAAGATTGGTCTTTTCATCATTGCATCGTTAGTTGGAAGTGACGGTGGGGTTATAGCTGGGTTAGCAGCATGTGGGGTGATGATGACGATTGTCGCTACTGCAGCTGATCTCATGCAAGACTTCAAGACAGGTTACCTCACTATGTCCTCGGCCAAGTCTATGTTTGTAAGCCAGTTAGTGGGGACAGCCATGGGTTGTGTGATTGCTCCGTTAACATTCTGGTTGTTTTGGACTGCATTTGATATCGGATCACCTGATGGTCCATACAAGGCACCCTATGCTGTAATATTCAGGGAAATGGCAATCCTAGGTATCGAGGGCTTCTCTGAGCTCCCCAAGCATTGTTTGGCTATGTGCGTCGGTTTTTTTGTGGCAGCGCTAGTTATAAACCTGCTGAGGGATGTGTGTCCTAAGAAAATATCACAGTTCATTCCGATTCCAATGGCAATGGCAGTCCCATTCTATATCGGAGCATACTTTGCCGTCGACATGTTTGTTGGGACTGTGATATTATTCATTTGGGAGCGAGTGAATAGGAAGGATGCGGAGGATTATGCAGGGGCAGTGGCCTCGGGTTTAATATGTGGTGATGGGATTTGGACAATCCCGTCGGCGGTCCTCTCAATTTTCAAGGTCAATCCACCCATCTGCATGTACTTCGGGCCTTCTTTGAGCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

680

Amino Acids

73.97

Weight (kDa)

5.95

Isoelectric Point (pI)

29.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	41 - 660	1.9e-148	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27020 AT5G41000 AT5G41000 AT5G41000
fragaria_vesca	FvH4_6g53820
malus_domestica	MD09G1008400.v1.1 MD17G1002400.v1.1
prunus_persica	Prupe.3G197700_v2.0.a1 Prupe.3G308600_v2.0.a1
pyrus_communis	pycom111g00670 pycom17g00700
rosa_chinensis	RchiOBHm_Chr2g0155151 RchiOBHm_Chr2g0175951 RchiOBHm_Chr4g0387931 RchiOBHm_Chr4g0404811 RchiOBHm_Chr6g0247711 RchiOBHm_Chr6g0308411 RchiOBHm_Chr7g0225381
rosa_laevigata	RLG00000001821 RLG00000022368
rosa_multiflora	Rmu_co8150112.1_g000001 Rmu_sc0007419.1_g000008 Rmu_sc0012106.1_g000001 Rmu_sc0018801.1_g000005
rosa_roxburghii	Rroxscaffold_2G00076910 Rroxscaffold_3G00233840 Rroxscaffold_5G00348620 Rroxscaffold_6G00388000 Rroxscaffold_7G00165420
rosa_rugosa	Rorug01G0171700 Rorug02G0588900 Rorug02G0589000 Rorug03G0332100 Rorug03G0332200 Rorug05G0042300 Rorug05G0110200 Rorug07G0229200
rosa_samantha	Rh1AG155500 Rh1CG145800 Rh2AG668100 Rh2BG679600 Rh2CG642400 Rh2DG572100 Rh2DG693100 Rh4AG072500 Rh4AG074300 Rh4BG070600 Rh4CG078900 Rh4DG161200 Rh5AG218500 Rh5BG431200 Rh5BG537600 Rh5CG454500 Rh5CG561600 Rh6AG476100 Rh7AG374200 Rh7BG363900 Rh7CG392400 Rh7DG375100
rosa_wichuraiana	Rw2G054770 Rw3G025300 Rw4G006410 Rw7G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1745
AasI	GACNNNNNNGTC	1 cut(s)	1966
Acc36I	ACCTGC	2 cut(s)	347, 1758
AccB1I	GGYRCC	1 cut(s)	1630
AccB7I	CCANNNNNTGG	1 cut(s)	1537
AccI	GTMKAC	1 cut(s)	1845
AciI	CCGC	7 cut(s)	231, 372, 452, 536, 735, 1904, 1973
AclWI	GGATC	1 cut(s)	1615
AcoI	YGGCCR	2 cut(s)	890, 1509
AcuI	CTGAAG	1 cut(s)	781
AfaI	GTAC	3 cut(s)	430, 1125, 2015
AfeI	AGCGCT	1 cut(s)	1737
AfiI	CCNNNNNNNGG	6 cut(s)	135, 312, 758, 1537, 1756, 1972
AflII	CTTAAG	1 cut(s)	1160
AflIII	ACRYGT	2 cut(s)	780, 1848
AgsI	TTSAA	6 cut(s)	223, 703, 952, 1350, 1483, 1990
AjiI	CACGTC	1 cut(s)	1179
AjnI	CCWGG	2 cut(s)	311, 513
AjuI	GAANNNNNNNTTGG	2 cut(s)	1247, 1279
Alw21I	GWGCWC	2 cut(s)	159, 1692
Alw26I	GTCTC	2 cut(s)	533, 1013
AlwI	GGATC	1 cut(s)	1615
Ama87I	CYCGRG	3 cut(s)	242, 439, 1930
Aor51HI	AGCGCT	1 cut(s)	1737
AoxI	GGCC	9 cut(s)	75, 358, 890, 1098, 1204, 1324, 1509, 1926, 2021
ApeKI	GCWGC	7 cut(s)	20, 162, 238, 696, 1424, 1460, 1733
AspA2I	CCTAGG	2 cut(s)	997, 1666
AspLEI	GCGC	2 cut(s)	152, 1738
AspS9I	GGNCC	6 cut(s)	6, 118, 1204, 1619, 1975, 2021
AsuC2I	CCSGG	3 cut(s)	440, 441, 643
AsuHPI	GGTGA	6 cut(s)	118, 172, 1118, 1447, 1602, 1958
AvaI	CYCGRG	3 cut(s)	242, 439, 1930
AvaII	GGWCC	4 cut(s)	6, 118, 1619, 1975
AvrII	CCTAGG	2 cut(s)	997, 1666
AxyI	CCTNAGG	1 cut(s)	1102
BaeI	ACNNNNGTAYC	2 cut(s)	1163, 1196
BanI	GGYRCC	1 cut(s)	1630
BanII	GRGCYC	1 cut(s)	1692
Bbv12I	GWGCWC	2 cut(s)	159, 1692
BbvCI	CCTCAGC	1 cut(s)	1754
BbvI	GCAGC	7 cut(s)	32, 174, 225, 683, 1436, 1472, 1745
BccI	CCATC	5 cut(s)	137, 998, 1610, 1943, 2012
BceAI	ACGGC	5 cut(s)	28, 62, 137, 877, 1826
BcgI	CGANNNNNNTGC	4 cut(s)	1911, 1945, 1999, 2033
BciT130I	CCWGG	2 cut(s)	313, 515
BciVI	GTATCC	2 cut(s)	933, 1164
BcnI	CCSGG	3 cut(s)	440, 441, 643
BcoDI	GTCTC	2 cut(s)	533, 1013
BfaI	CTAG	7 cut(s)	662, 753, 998, 1130, 1208, 1667, 1739
BfmI	CTRYAG	1 cut(s)	1458
BfoI	RGCGCY	2 cut(s)	153, 1739
BfrI	CTTAAG	1 cut(s)	1160
BfuAI	ACCTGC	2 cut(s)	347, 1758
BfuI	GTATCC	2 cut(s)	933, 1164
BisI	GCNGC	8 cut(s)	21, 163, 231, 239, 697, 1425, 1461, 1734
BlnI	CCTAGG	2 cut(s)	997, 1666
BlpI	GCTNAGC	1 cut(s)	850
BlsI	GCNGC	8 cut(s)	22, 164, 232, 240, 698, 1426, 1462, 1735
Bme1390I	CCNGG	5 cut(s)	313, 440, 441, 515, 643
Bme18I	GGWCC	4 cut(s)	6, 118, 1619, 1975
BmeT110I	CYCGRG	3 cut(s)	242, 439, 1930
BmgBI	CACGTC	1 cut(s)	1179
BmgT120I	GGNCC	6 cut(s)	6, 118, 1204, 1619, 1975, 2021
BmiI	GGNNCC	2 cut(s)	7, 1632
BmrFI	CCNGG	5 cut(s)	313, 440, 441, 515, 643
BmrI	ACTGGG	1 cut(s)	573
BmsI	GCATC	3 cut(s)	1138, 1391, 1891
BmuI	ACTGGG	1 cut(s)	573
BoxI	GACNNNNGTC	3 cut(s)	341, 798, 1448
BplI	GAGNNNNNCTC	2 cut(s)	1667, 1699
BpmI	CTGGAG	2 cut(s)	1209, 1357
Bpu10I	CCTNAGC	1 cut(s)	1754
Bpu1102I	GCTNAGC	1 cut(s)	850
BpuEI	CTTGAG	1 cut(s)	1028
BpuMI	CCSGG	3 cut(s)	440, 441, 643
BsaBI	GATNNNNATC	1 cut(s)	128
BsaI	GGTCTC	1 cut(s)	1013
Bsc4I	CCNNNNNNNGG	6 cut(s)	135, 312, 758, 1537, 1756, 1972
Bse1I	ACTGG	5 cut(s)	274, 579, 1327, 1340, 1531
Bse21I	CCTNAGG	1 cut(s)	1102
Bse3DI	GCAATG	5 cut(s)	603, 949, 984, 1377, 1812
Bse8I	GATNNNNATC	1 cut(s)	128
BseBI	CCWGG	2 cut(s)	313, 515
BseJI	GATNNNNATC	1 cut(s)	128
BseLI	CCNNNNNNNGG	6 cut(s)	135, 312, 758, 1537, 1756, 1972
BseMI	GCAATG	5 cut(s)	603, 949, 984, 1377, 1812
BseMII	CTCAG	4 cut(s)	30, 864, 1677, 1745
BseNI	ACTGG	5 cut(s)	274, 579, 1327, 1340, 1531
BseXI	GCAGC	7 cut(s)	32, 174, 225, 683, 1436, 1472, 1745
BseYI	CCCAGC	1 cut(s)	1415
Bsh1285I	CGRYCG	2 cut(s)	100, 204
BshFI	GGCC	9 cut(s)	77, 360, 892, 1100, 1206, 1326, 1511, 1928, 2023
BshNI	GGYRCC	1 cut(s)	1630
BsiEI	CGRYCG	2 cut(s)	100, 204
BsiHKAI	GWGCWC	2 cut(s)	159, 1692
BsiHKCI	CYCGRG	3 cut(s)	242, 439, 1930
BsiSI	CCGG	2 cut(s)	440, 642
BslFI	GGGAC	5 cut(s)	19, 598, 1555, 1799, 1873
BslI	CCNNNNNNNGG	6 cut(s)	135, 312, 758, 1537, 1756, 1972
BsmAI	GTCTC	2 cut(s)	533, 1013
BsmFI	GGGAC	5 cut(s)	19, 598, 1555, 1799, 1873
BsnI	GGCC	9 cut(s)	77, 360, 892, 1100, 1206, 1326, 1511, 1928, 2023
Bso31I	GGTCTC	1 cut(s)	1013
BsoBI	CYCGRG	3 cut(s)	242, 439, 1930
Bsp1286I	GDGCHC	2 cut(s)	159, 1692
Bsp143I	GATC	3 cut(s)	123, 1465, 1607
Bsp1720I	GCTNAGC	1 cut(s)	850
Bsp19I	CCATGG	2 cut(s)	399, 1548
BspACI	CCGC	7 cut(s)	231, 372, 452, 536, 735, 1904, 1973
BspANI	GGCC	9 cut(s)	77, 360, 892, 1100, 1206, 1326, 1511, 1928, 2023
BspCNI	CTCAG	4 cut(s)	31, 863, 1678, 1746
BspLI	GGNNCC	2 cut(s)	7, 1632
BspMAI	CTGCAG	1 cut(s)	1462
BspMI	ACCTGC	2 cut(s)	347, 1758
BspPI	GGATC	1 cut(s)	1615
BspT107I	GGYRCC	1 cut(s)	1630
BspTI	CTTAAG	1 cut(s)	1160
BspTNI	GGTCTC	1 cut(s)	1013
BsrDI	GCAATG	5 cut(s)	603, 949, 984, 1377, 1812
BsrI	ACTGG	5 cut(s)	274, 579, 1327, 1340, 1531
BssMI	GATC	3 cut(s)	123, 1465, 1607
BssT1I	CCWWGG	5 cut(s)	399, 934, 997, 1548, 1666
Bst2UI	CCWGG	2 cut(s)	313, 515
Bst4CI	ACNGT	6 cut(s)	202, 328, 771, 1403, 1785, 1864
Bst6I	CTCTTC	1 cut(s)	173
BstAFI	CTTAAG	1 cut(s)	1160
BstAPI	GCANNNNNTGC	3 cut(s)	638, 1637, 1838
BstC8I	GCNNGC	3 cut(s)	352, 396, 639
BstDEI	CTNAG	7 cut(s)	39, 621, 850, 1102, 1686, 1754, 1770
BstDSI	CCRYGG	3 cut(s)	27, 399, 1548
BstEII	GGTNACC	1 cut(s)	1490
BstENI	CCTNNNNNAGG	1 cut(s)	310
BstH2I	RGCGCY	2 cut(s)	153, 1739
BstHHI	GCGC	2 cut(s)	152, 1738
BstKTI	GATC	3 cut(s)	126, 1468, 1610
BstMAI	GTCTC	2 cut(s)	533, 1013
BstMBI	GATC	3 cut(s)	123, 1465, 1607
BstMCI	CGRYCG	2 cut(s)	100, 204
BstMWI	GCNNNNNNNGC	9 cut(s)	171, 516, 638, 1074, 1421, 1460, 1637, 1696, 1838
BstNI	CCWGG	2 cut(s)	313, 515
BstNSI	RCATGY	3 cut(s)	1431, 1852, 2014
BstPAI	GACNNNNGTC	3 cut(s)	341, 798, 1448
BstPI	GGTNACC	1 cut(s)	1490
BstSCI	CCNGG	5 cut(s)	311, 438, 439, 513, 641
BstSFI	CTRYAG	1 cut(s)	1458
BstV1I	GCAGC	7 cut(s)	32, 174, 225, 683, 1436, 1472, 1745
BstXI	CCANNNNNNTGG	1 cut(s)	911
Bsu36I	CCTNAGG	1 cut(s)	1102
BsuI	GTATCC	2 cut(s)	933, 1164
BsuRI	GGCC	9 cut(s)	77, 360, 892, 1100, 1206, 1326, 1511, 1928, 2023
BtgI	CCRYGG	3 cut(s)	27, 399, 1548
BtrI	CACGTC	1 cut(s)	1179
BtsI	GCAGTG	1 cut(s)	1929
BtsIMutI	CAGTG	4 cut(s)	586, 767, 1320, 1929
BveI	ACCTGC	2 cut(s)	347, 1758
Cac8I	GCNNGC	3 cut(s)	352, 396, 639
CfoI	GCGC	2 cut(s)	152, 1738
Cfr13I	GGNCC	6 cut(s)	6, 118, 1204, 1619, 1975, 2021
Cfr9I	CCCGGG	1 cut(s)	439
CseI	GACGC	3 cut(s)	12, 331, 1705
Csp6I	GTAC	3 cut(s)	429, 1124, 2014
CviQI	GTAC	3 cut(s)	429, 1124, 2014
DdeI	CTNAG	7 cut(s)	39, 621, 850, 1102, 1686, 1754, 1770
DpnI	GATC	3 cut(s)	125, 1467, 1609
DpnII	GATC	3 cut(s)	123, 1465, 1607
DrdI	GACNNNNNNGTC	1 cut(s)	1966
DseDI	GACNNNNNNGTC	1 cut(s)	1966
EaeI	YGGCCR	2 cut(s)	890, 1509
Eam1104I	CTCTTC	1 cut(s)	173
EarI	CTCTTC	1 cut(s)	173
EciI	GGCGGA	1 cut(s)	467
Ecl136II	GAGCTC	1 cut(s)	1690
Eco130I	CCWWGG	5 cut(s)	399, 934, 997, 1548, 1666
Eco147I	AGGCCT	1 cut(s)	1100
Eco24I	GRGCYC	1 cut(s)	1692
Eco31I	GGTCTC	1 cut(s)	1013
Eco32I	GATATC	2 cut(s)	36, 1603
Eco47I	GGWCC	4 cut(s)	6, 118, 1619, 1975
Eco47III	AGCGCT	1 cut(s)	1737
Eco53kI	GAGCTC	1 cut(s)	1690
Eco57I	CTGAAG	1 cut(s)	781
Eco81I	CCTNAGG	1 cut(s)	1102
Eco88I	CYCGRG	3 cut(s)	242, 439, 1930
Eco91I	GGTNACC	1 cut(s)	1490
EcoICRI	GAGCTC	1 cut(s)	1690
EcoNI	CCTNNNNNAGG	1 cut(s)	310
EcoO65I	GGTNACC	1 cut(s)	1490
EcoRII	CCWGG	2 cut(s)	311, 513
EcoRV	GATATC	2 cut(s)	36, 1603
EcoT14I	CCWWGG	5 cut(s)	399, 934, 997, 1548, 1666
EcoT38I	GRGCYC	1 cut(s)	1692
ErhI	CCWWGG	5 cut(s)	399, 934, 997, 1548, 1666
FalI	AAGNNNNNCTT	4 cut(s)	695, 727, 1085, 1117
FaqI	GGGAC	5 cut(s)	19, 598, 1555, 1799, 1873
FauI	CCCGC	1 cut(s)	365
FauNDI	CATATG	1 cut(s)	808
FblI	GTMKAC	1 cut(s)	1845
Fnu4HI	GCNGC	8 cut(s)	21, 163, 231, 239, 697, 1425, 1461, 1734
FriOI	GRGCYC	1 cut(s)	1692
Fsp4HI	GCNGC	8 cut(s)	21, 163, 231, 239, 697, 1425, 1461, 1734
FspBI	CTAG	7 cut(s)	662, 753, 998, 1130, 1208, 1667, 1739
GlaI	GCGC	2 cut(s)	151, 1737
GluI	GCNGC	8 cut(s)	21, 163, 231, 239, 697, 1425, 1461, 1734
GsaI	CCCAGC	1 cut(s)	1419
GsuI	CTGGAG	2 cut(s)	1209, 1357
HaeII	RGCGCY	2 cut(s)	153, 1739
HaeIII	GGCC	9 cut(s)	77, 360, 892, 1100, 1206, 1326, 1511, 1928, 2023
HapII	CCGG	2 cut(s)	440, 642
HgaI	GACGC	3 cut(s)	12, 331, 1705
HhaI	GCGC	2 cut(s)	152, 1738
Hin6I	GCGC	2 cut(s)	150, 1736
HinP1I	GCGC	2 cut(s)	150, 1736
HincII	GTYRAC	3 cut(s)	844, 1572, 1846
HindII	GTYRAC	3 cut(s)	844, 1572, 1846
HinfI	GANTC	5 cut(s)	11, 83, 102, 728, 1795
HpaI	GTTAAC	1 cut(s)	1572
HpaII	CCGG	2 cut(s)	440, 642
HphI	GGTGA	6 cut(s)	118, 172, 1118, 1447, 1602, 1958
Hpy166II	GTNNAC	3 cut(s)	844, 1572, 1846
Hpy188III	TCNNGA	3 cut(s)	205, 334, 1483
Hpy8I	GTNNAC	3 cut(s)	844, 1572, 1846
HpyAV	CCTTC	5 cut(s)	109, 1091, 1312, 1891, 2034
HpyCH4III	ACNGT	6 cut(s)	202, 328, 771, 1403, 1785, 1864
HpyCH4IV	ACGT	3 cut(s)	225, 782, 1178
HpyCH4V	TGCA	9 cut(s)	174, 1151, 1308, 1382, 1460, 1474, 1595, 1916, 2010
HpyF10VI	GCNNNNNNNGC	9 cut(s)	171, 516, 638, 1074, 1421, 1460, 1637, 1696, 1838
HpyF3I	CTNAG	7 cut(s)	39, 621, 850, 1102, 1686, 1754, 1770
HpySE526I	ACGT	3 cut(s)	225, 782, 1178
HspAI	GCGC	2 cut(s)	150, 1736
KspAI	GTTAAC	1 cut(s)	1572
Kzo9I	GATC	3 cut(s)	123, 1465, 1607
LmnI	GCTCC	8 cut(s)	629, 693, 1190, 1294, 1570, 1695, 1829, 1882
Lsp1109I	GCAGC	7 cut(s)	32, 174, 225, 683, 1436, 1472, 1745
LweI	GCATC	3 cut(s)	1138, 1391, 1891
MaeI	CTAG	7 cut(s)	662, 753, 998, 1130, 1208, 1667, 1739
MaeII	ACGT	3 cut(s)	225, 782, 1178
MaeIII	GTNAC	3 cut(s)	298, 1397, 1490
MalI	GATC	3 cut(s)	125, 1467, 1609
MboI	GATC	3 cut(s)	123, 1465, 1607
MboII	GAAGA	5 cut(s)	160, 241, 244, 467, 1372
MhlI	GDGCHC	2 cut(s)	159, 1692
MluCI	AATT	7 cut(s)	55, 284, 423, 687, 745, 1015, 1983
MlyI	GAGTC	1 cut(s)	92
MmeI	TCCRAC	5 cut(s)	84, 111, 793, 827, 1372
MseI	TTAA	7 cut(s)	674, 686, 774, 896, 1161, 1571, 1937
MslI	CAYNNNNRTG	2 cut(s)	596, 2009
MspA1I	CMGCKG	1 cut(s)	1463
MspCI	CTTAAG	1 cut(s)	1160
MspI	CCGG	2 cut(s)	440, 642
MspR9I	CCNGG	5 cut(s)	313, 440, 441, 515, 643
MvaI	CCWGG	2 cut(s)	313, 515
MwoI	GCNNNNNNNGC	9 cut(s)	171, 516, 638, 1074, 1421, 1460, 1637, 1696, 1838
NciI	CCSGG	3 cut(s)	440, 441, 643
NcoI	CCATGG	2 cut(s)	399, 1548
NdeI	CATATG	1 cut(s)	808
NdeII	GATC	3 cut(s)	123, 1465, 1607
NlaIV	GGNNCC	2 cut(s)	7, 1632
NmeAIII	GCCGAG	2 cut(s)	138, 1487
NmuCI	GTSAC	1 cut(s)	1397
NspI	RCATGY	3 cut(s)	1431, 1852, 2014
PceI	AGGCCT	1 cut(s)	1100
PciI	ACATGT	1 cut(s)	1848
PcsI	WCGNNNNNNNCGW	1 cut(s)	150
PfeI	GAWTC	4 cut(s)	11, 102, 728, 1795
PflMI	CCANNNNNTGG	1 cut(s)	1537
PkrI	GCNGC	8 cut(s)	22, 164, 232, 240, 698, 1426, 1462, 1735
PleI	GAGTC	1 cut(s)	91
PpsI	GAGTC	1 cut(s)	91
PscI	ACATGT	1 cut(s)	1848
PshAI	GACNNNNGTC	3 cut(s)	341, 798, 1448
PsiI	TTATAA	1 cut(s)	1745
Psp124BI	GAGCTC	1 cut(s)	1692
Psp6I	CCWGG	2 cut(s)	311, 513
PspEI	GGTNACC	1 cut(s)	1490
PspFI	CCCAGC	1 cut(s)	1415
PspGI	CCWGG	2 cut(s)	311, 513
PspN4I	GGNNCC	2 cut(s)	7, 1632
PspPI	GGNCC	6 cut(s)	6, 118, 1204, 1619, 1975, 2021
PstI	CTGCAG	1 cut(s)	1462
PvuII	CAGCTG	1 cut(s)	1463
RsaI	GTAC	3 cut(s)	430, 1125, 2015
RsaNI	GTAC	3 cut(s)	429, 1124, 2014
RseI	CAYNNNNRTG	2 cut(s)	596, 2009
SacI	GAGCTC	1 cut(s)	1692
SalI	GTCGAC	1 cut(s)	1844
SaqAI	TTAA	7 cut(s)	674, 686, 774, 896, 1161, 1571, 1937
SatI	GCNGC	8 cut(s)	21, 163, 231, 239, 697, 1425, 1461, 1734
Sau3AI	GATC	3 cut(s)	123, 1465, 1607
Sau96I	GGNCC	6 cut(s)	6, 118, 1204, 1619, 1975, 2021
SchI	GAGTC	1 cut(s)	92
ScrFI	CCNGG	5 cut(s)	313, 440, 441, 515, 643
SduI	GDGCHC	2 cut(s)	159, 1692
SfaNI	GCATC	3 cut(s)	1138, 1391, 1891
SfcI	CTRYAG	1 cut(s)	1458
SinI	GGWCC	4 cut(s)	6, 118, 1619, 1975
SmaI	CCCGGG	1 cut(s)	441
SmiMI	CAYNNNNRTG	2 cut(s)	596, 2009
SmlI	CTYRAG	2 cut(s)	1043, 1160
SmoI	CTYRAG	2 cut(s)	1043, 1160
Sse9I	AATT	7 cut(s)	55, 284, 423, 687, 745, 1015, 1983
SseBI	AGGCCT	1 cut(s)	1100
SsiI	CCGC	7 cut(s)	231, 372, 452, 536, 735, 1904, 1973
SspI	AATATT	3 cut(s)	908, 1155, 1647
SspMI	CTAG	7 cut(s)	662, 753, 998, 1130, 1208, 1667, 1739
SstI	GAGCTC	1 cut(s)	1692
StuI	AGGCCT	1 cut(s)	1100
StyD4I	CCNGG	5 cut(s)	311, 438, 439, 513, 641
StyI	CCWWGG	5 cut(s)	399, 934, 997, 1548, 1666
TaaI	ACNGT	6 cut(s)	202, 328, 771, 1403, 1785, 1864
TaiI	ACGT	3 cut(s)	228, 785, 1181
TaqI	TCGA	2 cut(s)	1674, 1845
TaqII	GACCGA	2 cut(s)	23, 114
TasI	AATT	7 cut(s)	55, 284, 423, 687, 745, 1015, 1983
TatI	WGTACW	1 cut(s)	2013
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	4 cut(s)	11, 102, 728, 1795
Tru1I	TTAA	7 cut(s)	674, 686, 774, 896, 1161, 1571, 1937
Tru9I	TTAA	7 cut(s)	674, 686, 774, 896, 1161, 1571, 1937
TscAI	CASTG	4 cut(s)	586, 774, 1327, 1929
TseFI	GTSAC	1 cut(s)	1397
TseI	GCWGC	7 cut(s)	20, 162, 238, 696, 1424, 1460, 1733
Tsp45I	GTSAC	1 cut(s)	1397
TspDTI	ATGAA	5 cut(s)	644, 720, 1363, 1777, 1864
TspGWI	ACGGA	3 cut(s)	16, 1346, 1557
TspMI	CCCGGG	1 cut(s)	439
TspRI	CASTG	4 cut(s)	586, 774, 1327, 1929
Van91I	CCANNNNNTGG	1 cut(s)	1537
Vha464I	CTTAAG	1 cut(s)	1160
VpaK11BI	GGWCC	4 cut(s)	6, 118, 1619, 1975
XagI	CCTNNNNNAGG	1 cut(s)	310
XceI	RCATGY	3 cut(s)	1431, 1852, 2014
XcmI	CCANNNNNNNNNTGG	4 cut(s)	136, 623, 1254, 1702
XmaI	CCCGGG	1 cut(s)	439
XmaJI	CCTAGG	2 cut(s)	997, 1666
XmiI	GTMKAC	1 cut(s)	1845
XspI	CTAG	7 cut(s)	662, 753, 998, 1130, 1208, 1667, 1739

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.